CsGy1G033330 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G033330
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncyclin-T1-4-like
LocationChr1 : 33207918 .. 33210719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGACTTCTGCCATTTGAGTCTACGCATCATAGAATATCTGATAGTGGGTCCTCAAAGAATTCCCAAGAAAATCAAGACGAAGCAGGTCGTTGGTATATGTCCAGAAAGGAAATTGAAGAAAATTCCCCATCAAGAAGAGATGGTATTGACTTGAAGAAGGAGACATATTTAAGGAAGTCATACTGCACCTTTTTGCAAGATCTGGGCATGAGGCTCAAAGTGTAAGACTTTGCTGTTTGATTTTACCTAAATATTATATATGTTGTGAACTAAAAGTTTGTTGTGCAAGTGTGTAGTCTTTTATTTATTTTTTTTTAAAGGGAAACAAGTCTCTTTTTATTGATTATAAATGAGACAAAAGCTCATATTACAAGAGATTTATACAATGAGAAAAAGAACTTTAGGATTAGTAAGTGCACCAGACATCTTAACTAGGTTGGCAATCCAACAAAATTGAGATCATACAGCCTTTCCAGCATATGATAGAGATACATGTAAAAACAAAAGATACAATCCTTGAGCAATAAGACCAAGACCTTGAGAAAAGTATCCATAAGTGATACAAGTACAAAATGACTTTAAAACTTAAAAATAATACAGTAATACATAAATTCTGCTACTATTATGGTCCATGGAGGAGGGATGAATGCCTGCCAATTCAGATTGGGCTCCTGAATTGAGTAGCCTTCAAAAACCTTTGATAGCCATAGCGTGCACCAAGACGAGGCATTTAAATGAGCAAGCTCTAAGCGATCTAACCAATGGGAAGATTTATTGTGGAAAAGTTGTTGGTTCCTTTCAAATCATAATTGTCAGACAATAGGCTTTTATTGCATTATTCCAAATCAAAGAAGGCTGTTTCTTGAGGGCTGGACTACCAACCCAAATTTGATGAACATTACTCCCAATGATTAGTAATAGAACCTTCCGGAACATAGGAAAGAAATTTTATCCAGCCACAGATCAGACAAGAAAGCTGTTGTACTGCCATTTCCTACTTTATACACTGCCAAAGCTTCAATCTTACGCCATTGTGCAAGTGTGTAGTCTAGGATTCATTTTACTGTACCTTTTGGTCACAATCCTCGTAGTTTGCCCTTTTGGTAGGCCATTGTGGGTAAGATTAAAAAAAATTTAGCTTCTTGGAGGAGGTGCTTTTCTCTGAAGGAAGAAGGATCATTCCTATTTTGCCTTGCTCAAGTGGCTTTTATCCTTGGTTATAATTCCTGTGTCACTAGCAAGACTTCGGAGAATTTTATTTCTTCACATATGCTAAGAGAGTTCGTTCATCTTTATGGAAGTCTAAATCTCCCAAACACGTTAATTTCTTTATTTGGGTGATGTTTACTGGTTTATTGATTTAGTTTGAGGTTCTACAAAGAAGCTTCCTCTTCACTGTATATCAGTATCAATTTTCCTGCTTTGATGTTAGATAGTGATGCTTGATATCATTTTTTCTTTGATTGCTCTTACTCAAGTAAATGTTGGTGGAACAATTTTCTATCTTTAATGTTTAATGGGTATTCTCTAATTTATTTAAGGAGAACATTCTTCATTTGATGGTTGATCGTCTTCCTCCCTTTTTTGGATAATAAACAATTTTATTGATGTATGAGATTTACAAAAAGGGCTGCAGCCTGAGCCAAAGGTGTTACATAAGTGATCTCCAATTGGACAAAAGGGAAGACAGAGTGTATGATTTAAAAGAAACATTTACACCAACTCATACCATGAAAGATAATGAGTTACAAAAAATAACCAGAAGGGCTTCCCCTATCATTGAAATCAGCTGTTCCTCTCTTTCCAAGTGGTTCATAAGAAAGCACGGATAACATGCATCCAATTGAGCTTCTTGTTTTTTGGTGAAGGGGTGTCTAATGAGAGTGTAGGATAAAGCACTTTTCAATGTCTCATGGGAAGGCAGTATACCATCCAAATGATGGAAAGATCTCTTTCCAAAATCTCAGGAAAAATGGCAATGGATGAATTGGTTACTAGTTGTTTCCTATCTAGACTTGCACACGAGGCAACATTGGGGAGATAGGGCAATGTATGTTGTGGTCTAATAGGGTCATGATCGTCATCCTCCCTTTGTGCCAAAATCTAAGTTATTTTGGTCTAATGGAATGAAAACTCTGCTGTTTGAAATTTGGTTTGAAAGGAATCTGTGTATTTTGGTGACCATTGACAAGTCTCTTCTTTGCGCGTTTGCTTTGGTTCGACTCACCTCAAAGTCTCTGCATGATGTTCTCTTTTCAAACTCTTTGCAGATTATTCTAAGATATCTGTTTTAACTGAAACATTTTTTTGTTTCCTTCATAATTTTGTTGTATTTCTTTTGTTCCTTTTCTTTTCTTTCCCCTAAGGGGTAGTTTGTATTTTTGAGCATTAGCCTCTTTTCTTTATTTGAATGAAAATATCTCTTTTCTTTTCCTAAAAGAAAGAAAAAGAAGTTGGGGTTTGTGAGTGGAAGGGGTTTCATTTTGTATTGCGATAGAAGGTGATTGAACTTGTGGACCTTGGATGGGTTAGCTATAGGCAACTTAAGGGTTTAAAATTGGGCCTTGTTGGCAAAGCAATTATGATGTATTCCTTGCGAGCCATACTTTTTCTGTCAAATATGGGCATCCCAAGCATTGTTCCAGTTTCGTGAATGGTCTTGAAACAGGACTCTTGAAGGTAAACAGTGCGGGGAAAGCTGTCTTTGATGGTTTTCGTTGTTTCTCTTTGTTTGTTTCATGTGTGGTGAGTGATGGGGGAGATACCTATTTCGGGAAAATAAGTGTCATGGGATAG

mRNA sequence

ATGTCTGGACTTCTGCCATTTGAGTCTACGCATCATAGAATATCTGATAGTGGGTCCTCAAAGAATTCCCAAGAAAATCAAGACGAAGCAGGTCGTTGGTATATGTCCAGAAAGGAAATTGAAGAAAATTCCCCATCAAGAAGAGATGGTATTGACTTGAAGAAGGAGACATATTTAAGGAAGTCATACTGCACCTTTTTGCAAGATCTGGGCATGAGGCTCAAAGTTTTCGTGAATGGTCTTGAAACAGGACTCTTGAAGGTAAACAGTGCGGGGAAAGCTGTCTTTGATGGTTTTCGTTGTTTCTCTTTGTTTGTTTCATGTGTGGTGAGTGATGGGGGAGATACCTATTTCGGGAAAATAAGTGTCATGGGATAG

Coding sequence (CDS)

ATGTCTGGACTTCTGCCATTTGAGTCTACGCATCATAGAATATCTGATAGTGGGTCCTCAAAGAATTCCCAAGAAAATCAAGACGAAGCAGGTCGTTGGTATATGTCCAGAAAGGAAATTGAAGAAAATTCCCCATCAAGAAGAGATGGTATTGACTTGAAGAAGGAGACATATTTAAGGAAGTCATACTGCACCTTTTTGCAAGATCTGGGCATGAGGCTCAAAGTTTTCGTGAATGGTCTTGAAACAGGACTCTTGAAGGTAAACAGTGCGGGGAAAGCTGTCTTTGATGGTTTTCGTTGTTTCTCTTTGTTTGTTTCATGTGTGGTGAGTGATGGGGGAGATACCTATTTCGGGAAAATAAGTGTCATGGGATAG

Protein sequence

MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKVFVNGLETGLLKVNSAGKAVFDGFRCFSLFVSCVVSDGGDTYFGKISVMG
Homology
[Close]
BLAST of CsGy1G033330 vs. NCBI nr
Match: XP_011660325.1 (PREDICTED: cyclin-T1-3 [Cucumis sativus] >KGN66912.1 hypothetical protein Csa_1G714690 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 4.2e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. NCBI nr
Match: XP_008459075.1 (PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-5 [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 6.0e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          MSGLLPFESTHHRIS+SGSSKNSQE QDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MSGLLPFESTHHRISESGSSKNSQEKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. NCBI nr
Match: XP_022927311.1 (cyclin-T1-5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+GLLPFESTHHRISDSGSS +SQENQDE GRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MAGLLPFESTHHRISDSGSSMSSQENQDEGGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. NCBI nr
Match: XP_023519545.1 (cyclin-T1-5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+GLLPFESTHHRISDSGSS +SQENQDE GRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MAGLLPFESTHHRISDSGSSMSSQENQDEGGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. NCBI nr
Match: XP_022954903.1 (cyclin-T1-5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 140.2 bits (352), Expect = 4.8e-30
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          MSG LPF+STHHR SD GSSK+SQE QDEAG WY+SRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MSGFLPFDSTHHRTSDGGSSKSSQEKQDEAGHWYLSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TAIR10
Match: AT5G45190.2 (Cyclin family protein)

HSP 1 Score: 104.0 bits (258), Expect = 6.9e-23
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+G+L  E ++     S  S+NS E Q+E  RWY  RKEIEENSPSR DGIDLKKETYLR
Sbjct: 1  MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLK+
Sbjct: 61 KSYCTFLQDLGMRLKL 76

[Close]
BLAST of CsGy1G033330 vs. TAIR10
Match: AT4G19600.1 (Cyclin family protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.5e-22
Identity = 52/76 (68.42%), Postives = 57/76 (75.00%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+G+L  + +      S  S+NS E QDE  RWY  RKEIEENSPSR D IDLKKETYLR
Sbjct: 1  MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TAIR10
Match: AT4G19560.1 (Cyclin family protein)

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0 

Query: 19 SSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV 77
          SS  S  + DE   W+ SR+EIE NSPSRRDGIDLK ET LR SYCTFL+ LG RLKV
Sbjct: 17 SSVASNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKV 74

[Close]
BLAST of CsGy1G033330 vs. TAIR10
Match: AT1G27630.1 (cyclin T 1;3)

HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 0 

Query: 9   STHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQ 68
           S  H  +++ +    +  Q E  +WY SR+EIE  SPSR+DGIDL KE++LR SYCTFLQ
Sbjct: 10  SRQHFEAEARNVSLFESPQCETSKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQ 69

Query: 69  DLGMRLKVFVNGLETGLLKVN------SAGKAVFDGFRCFSLFVSCVVSD 113
            LGM+L V    +   ++  +      S  K  +      SLF++C   D
Sbjct: 70  RLGMKLHVSQVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAED 119

[Close]
BLAST of CsGy1G033330 vs. TAIR10
Match: AT1G35440.1 (cyclin T1;1)

HSP 1 Score: 57.0 bits (136), Expect = 9.7e-09
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 29 EAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRL 75
          E   WY +R+ IE+ SPSR DGI+LK+ET+ R SY +FLQ+LG RL
Sbjct: 3  ETKNWYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRL 48

[Close]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match: sp|Q9FKE6|CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-22
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+G+L  E ++     S  S+NS E Q+E  RWY  RKEIEENSPSR DGIDLKKETYLR
Sbjct: 1  MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match: sp|Q8GYM6|CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-21
Identity = 52/76 (68.42%), Postives = 57/76 (75.00%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+G+L  + +      S  S+NS E QDE  RWY  RKEIEENSPSR D IDLKKETYLR
Sbjct: 1  MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match: sp|Q2QQS5|CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 4  LLPFESTHHRISDSGSSKNSQENQDEAGR----WYMSRKEIEENSPSRRDGIDLKKETYL 63
          ++P +S+HH I ++   + +Q   +E G     WY SRKEIEENSPSRRDGIDLKKE+YL
Sbjct: 3  MMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKESYL 62

Query: 64 RKSYCTFLQDLGMRLKV 77
          RKSYCTFLQDLGMRLKV
Sbjct: 63 RKSYCTFLQDLGMRLKV 79

[Close]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match: sp|Q2RAC5|CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGR----WYMSRKEIEENSPSRRDGIDLKKE 60
          M G+   +S+HH I ++   +   +   E G+    WY SRKEIEENS SRRDGIDLKKE
Sbjct: 1  MDGIQTSDSSHHGIVENSPYRTPYDRYAEGGQLGASWYFSRKEIEENSLSRRDGIDLKKE 60

Query: 61 TYLRKSYCTFLQDLGMRLKV 77
          +YLRKSYCTFLQDLGMRLKV
Sbjct: 61 SYLRKSYCTFLQDLGMRLKV 80

[Close]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match: sp|Q56YF8|CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 5.2e-12
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0 

Query: 19 SSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLRKSYCTFLQDLGMRLKV 77
          SS  S  + DE   W+ SR+EIE NSPSRRDGIDLK ET LR SYCTFL+ LG RLKV
Sbjct: 17 SSVASNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKV 74

[Close]
BLAST of CsGy1G033330 vs. TrEMBL
Match: tr|A0A0A0M1B5|A0A0A0M1B5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G714690 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TrEMBL
Match: tr|A0A1S3CAJ8|A0A1S3CAJ8_CUCME (LOW QUALITY PROTEIN: cyclin-T1-5 OS=Cucumis melo OX=3656 GN=LOC103498292 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.0e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          MSGLLPFESTHHRIS+SGSSKNSQE QDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MSGLLPFESTHHRISESGSSKNSQEKQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TrEMBL
Match: tr|A0A2P4HVE8|A0A2P4HVE8_QUESU (Cyclin-t1-5 OS=Quercus suber OX=58331 GN=CFP56_25417 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+GLL  ES+HH  SD GSS+NSQ+ Q+E+GRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MAGLLSGESSHHGTSDGGSSRNSQDRQEESGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TrEMBL
Match: tr|A0A2P4HVA0|A0A2P4HVA0_QUESU (Cyclin-t1-5 OS=Quercus suber OX=58331 GN=CFP56_25417 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+GLL  ES+HH  SD GSS+NSQ+ Q+E+GRWYMSRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MAGLLSGESSHHGTSDGGSSRNSQDRQEESGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

[Close]
BLAST of CsGy1G033330 vs. TrEMBL
Match: tr|A0A1U8IJY3|A0A1U8IJY3_GOSHI (cyclin-T1-4-like OS=Gossypium hirsutum OX=3635 GN=LOC107897485 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0 

Query: 1  MSGLLPFESTHHRISDSGSSKNSQENQDEAGRWYMSRKEIEENSPSRRDGIDLKKETYLR 60
          M+G+LP +S+HH  SD+G S+NSQE Q+E GRWY SRKEIEENSPSRRDGIDLKKETYLR
Sbjct: 1  MAGMLPGDSSHHSTSDTGPSRNSQEKQEEVGRWYFSRKEIEENSPSRRDGIDLKKETYLR 60

Query: 61 KSYCTFLQDLGMRLKV 77
          KSYCTFLQDLGMRLKV
Sbjct: 61 KSYCTFLQDLGMRLKV 76

The following BLAST results are available for this feature:
BLAST of CsGy1G033330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660325.14.2e-34100.00PREDICTED: cyclin-T1-3 [Cucumis sativus] >KGN66912.1 hypothetical protein Csa_1G... [more]
XP_008459075.16.0e-3397.37PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-5 [Cucumis melo][more]
XP_022927311.15.1e-3294.74cyclin-T1-5-like isoform X1 [Cucurbita moschata][more]
XP_023519545.15.1e-3294.74cyclin-T1-5-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022954903.14.8e-3089.47cyclin-T1-5-like isoform X2 [Cucurbita moschata][more]
BLAST of CsGy1G033330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G45190.26.9e-2368.42Cyclin family protein[more]
AT4G19600.14.5e-2268.42Cyclin family protein[more]
AT4G19560.12.9e-1367.24Cyclin family protein[more]
AT1G27630.16.5e-1339.09cyclin T 1;3[more]
AT1G35440.19.7e-0958.70cyclin T1;1[more]
BLAST of CsGy1G033330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FKE6|CCT15_ARATH5.6e-2269.74Cyclin-T1-5 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-5 PE=1 SV=2[more]
sp|Q8GYM6|CCT14_ARATH8.1e-2168.42Cyclin-T1-4 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-4 PE=1 SV=1[more]
sp|Q2QQS5|CCT14_ORYSJ1.4e-2064.94Cyclin-T1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-1 PE=2 SV=1[more]
sp|Q2RAC5|CCT13_ORYSJ2.2e-1861.25Cyclin-T1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCT1-3 PE=3 SV=2[more]
sp|Q56YF8|CCT12_ARATH5.2e-1267.24Cyclin-T1-2 OS=Arabidopsis thaliana OX=3702 GN=CYCT1-2 PE=2 SV=2[more]
BLAST of CsGy1G033330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M1B5|A0A0A0M1B5_CUCSA2.8e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G714690 PE=3 SV=1[more]
tr|A0A1S3CAJ8|A0A1S3CAJ8_CUCME4.0e-3397.37LOW QUALITY PROTEIN: cyclin-T1-5 OS=Cucumis melo OX=3656 GN=LOC103498292 PE=3 SV... [more]
tr|A0A2P4HVE8|A0A2P4HVE8_QUESU1.9e-2784.21Cyclin-t1-5 OS=Quercus suber OX=58331 GN=CFP56_25417 PE=3 SV=1[more]
tr|A0A2P4HVA0|A0A2P4HVA0_QUESU1.9e-2784.21Cyclin-t1-5 OS=Quercus suber OX=58331 GN=CFP56_25417 PE=4 SV=1[more]
tr|A0A1U8IJY3|A0A1U8IJY3_GOSHI4.3e-2781.58cyclin-T1-4-like OS=Gossypium hirsutum OX=3635 GN=LOC107897485 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G033330.1CsGy1G033330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.472.10coord: 19..89
e-value: 2.1E-11
score: 45.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 9..77
NoneNo IPR availablePANTHERPTHR10026:SF103SUBFAMILY NOT NAMEDcoord: 9..77
IPR036915Cyclin-like superfamilySUPERFAMILYSSF47954Cyclin-likecoord: 29..83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G033330Cla009179Watermelon (97103) v1cgybwmB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G033330Cucurbita maxima (Rimu)cgybcmaB065
CsGy1G033330Cucurbita maxima (Rimu)cgybcmaB096
CsGy1G033330Cucurbita moschata (Rifu)cgybcmoB061
CsGy1G033330Cucurbita moschata (Rifu)cgybcmoB090
CsGy1G033330Cucurbita pepo (Zucchini)cgybcpeB008
CsGy1G033330Cucurbita pepo (Zucchini)cgybcpeB083
CsGy1G033330Cucumber (Chinese Long) v2cgybcuB002
CsGy1G033330Bottle gourd (USVL1VR-Ls)cgyblsiB030
CsGy1G033330Melon (DHL92) v3.5.1cgybmeB032
CsGy1G033330Melon (DHL92) v3.6.1cgybmedB029
CsGy1G033330Watermelon (Charleston Gray)cgybwcgB022
CsGy1G033330Wild cucumber (PI 183967)cgybcpiB002
CsGy1G033330Silver-seed gourdcarcgybB0406
CsGy1G033330Silver-seed gourdcarcgybB0459
CsGy1G033330Cucumber (Chinese Long) v3cgybcucB001
CsGy1G033330Watermelon (97103) v2cgybwmbB011
CsGy1G033330Wax gourdcgybwgoB028