CsGy1G032950 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G032950
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 32630564 .. 32631998 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTGATATTATGGTTTTCAAGGGTTTTTTTATATTTGAAAATCAGGTCATTCTAGCAGCTTCAATCACTCATTCACCAACAATTTTCATTTTACAATGCCCTCCAGTTTCTTCATTTCAGGTACACATATCCCCCCTTTTTTTCTCCTTTTCATTTGTCTATTGAAACTACCTGTTTGTGGTCTTCTTTATTCATTGATTATTTATTGTCTTTGCCTTTTATATGAACCTGAATTTAATGTTGTCTTATAGATTTTTTTTCTCCAAGAGGTGGGTTGTGGATTTTGCTTATTTGGAAAGGGTTGTTAAATTGCAAGGTAGTTTTTTTCTTTTTGTGTGTGATTTCAACCAAATAACATGGGAAGGTCATTAAGATTTGAAGGGGAAATGATATTCAGATGTGGATATGGGAATTCAATAATTAATCTTCTTTCTCTCTCCTTAAGTTTTCTCTCTCTAAAAAGTTTAATTTCATTGTAAAGGAACATCAAAGATATGAAAGAAATTTAAGTGTTGATGTCCTTTCTCTCAAATTTTCATCTTTAAAGCAACCCAAGAATTGGAATATATGGGCAGTCAATACCCTTATCCTCCCCAAGTTTTTATCTTGTTTTTGTCTTCAGAACAAAATTTGAATTCAAATGTTTTCTCATTTCAATGTTAATTTCATCTCTTTTAATTATATTTCTTGAGTTTTTTTTTTTTTTCACATTCAAAGCAAAGCAAAGACAATAGAATTGGAATTCAAATAATGCTGTTTCATAGTTTCAAGTTTTAATTTTGTTATACATTTATTGATATATATATAGGCCCTCTCTTTGCTCTTCCTTTCATTTTAAAGCAAACCAAAACATGGAATGGAAGTCAATCCCCTCCCCTCACTCTCCATAAGCTTTCAATTTTGTTATATTGTCAATGCTTTTAAGAGTCTTTTTGACCTGTGTGCTTGAATATTGTAGAAGATCAATAACAAATGGAAATCAATATTACAATGGGAAAAGGAAAGGATGTTAAACAGTAATCAAAGTTGGTGAGTTGGTAGGTTTTAACACTTTTTTTAGTCGATCAAGCCTTTGTATATGATCTTTAATTCCCTGATCAAGAAGAAATCAGTTGTTGTTTCAAATGTGAATTGGGTCTTTCTCATGTTATGTTTTTTTTTATAATTATGGTGCTAATTCTACCATATAAATTGTTTCCACTGGCGTCCATATGAGTATGTACAACTTTTGTTACTAAATTCAAGTTTAAGTTGTTTGAACATACGCACAAAACACTTTGTACGTCAAGGAAGATAAGAGAAAATAGAAGAAAAGTCAATTTATGGTCTCTGTATAGAAGTTTTTTCACACATTACATCAGGTGTGTCTGTTCTGAATTGTCTCAACTTTAAAACAGCATCCATACACACTCCAGAAATCAAAATATAG

mRNA sequence

ATGGATTTTGATATTATGGTCATTCTAGCAGCTTCAATCACTCATTCACCAACAATTTTCATTTTACAATGCCCTCCAGTTTCTTCATTTCAGAGGTGGGTTGTGGATTTTGCTTATTTGGAAAGGGTTGTTAAATTGCAAGGTGTGTCTGTTCTGAATTGTCTCAACTTTAAAACAGCATCCATACACACTCCAGAAATCAAAATATAG

Coding sequence (CDS)

ATGGATTTTGATATTATGGTCATTCTAGCAGCTTCAATCACTCATTCACCAACAATTTTCATTTTACAATGCCCTCCAGTTTCTTCATTTCAGAGGTGGGTTGTGGATTTTGCTTATTTGGAAAGGGTTGTTAAATTGCAAGGTGTGTCTGTTCTGAATTGTCTCAACTTTAAAACAGCATCCATACACACTCCAGAAATCAAAATATAG

Protein sequence

MDFDIMVILAASITHSPTIFILQCPPVSSFQRWVVDFAYLERVVKLQGVSVLNCLNFKTASIHTPEIKI
Homology
[Close]
BLAST of CsGy1G032950 vs. NCBI nr
Match: KGN66876.1 (hypothetical protein Csa_1G702010 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-04
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 3  FDIMVILAASITHSPTIFILQCPPVSSFQR 33
          F+  VILAASITHSPTIFILQCPPVSSFQ+
Sbjct: 34 FENQVILAASITHSPTIFILQCPPVSSFQK 63

[Close]
BLAST of CsGy1G032950 vs. TrEMBL
Match: tr|A0A0A0M3T1|A0A0A0M3T1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702010 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.7e-05
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 3  FDIMVILAASITHSPTIFILQCPPVSSFQR 33
          F+  VILAASITHSPTIFILQCPPVSSFQ+
Sbjct: 34 FENQVILAASITHSPTIFILQCPPVSSFQK 63

The following BLAST results are available for this feature:
BLAST of CsGy1G032950 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66876.11.5e-0486.67hypothetical protein Csa_1G702010 [Cucumis sativus][more]
BLAST of CsGy1G032950 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G032950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G032950 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M3T1|A0A0A0M3T1_CUCSA9.7e-0586.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702010 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G032950.1CsGy1G032950.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G032950CsaV3_1G046340Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G032950Watermelon (97103) v2cgybwmbB011
CsGy1G032950Wax gourdcgybwgoB028
CsGy1G032950Cucurbita maxima (Rimu)cgybcmaB065
CsGy1G032950Cucurbita maxima (Rimu)cgybcmaB096
CsGy1G032950Cucurbita moschata (Rifu)cgybcmoB061
CsGy1G032950Cucurbita moschata (Rifu)cgybcmoB090
CsGy1G032950Cucurbita pepo (Zucchini)cgybcpeB008
CsGy1G032950Cucurbita pepo (Zucchini)cgybcpeB083
CsGy1G032950Cucumber (Chinese Long) v2cgybcuB002
CsGy1G032950Bottle gourd (USVL1VR-Ls)cgyblsiB030
CsGy1G032950Melon (DHL92) v3.5.1cgybmeB012
CsGy1G032950Melon (DHL92) v3.6.1cgybmedB011
CsGy1G032950Watermelon (Charleston Gray)cgybwcgB022
CsGy1G032950Watermelon (97103) v1cgybwmB050
CsGy1G032950Watermelon (97103) v1cgybwmB045
CsGy1G032950Wild cucumber (PI 183967)cgybcpiB002