CsGy1G031760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G031760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 30817277 .. 30818401 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGCCGGAGTCGTTTTATATTTTTCTGTATAATGATCCAAACATATGCAAGGAGCGGACTTGCCGGAGAAAATTTGCATTCCCGTCTGTTTTCAGGTACAAGTCATGTCAACAAAATGCACCTCACACTCCTAGCACATGCTCAACTTGTTTTGCTGGCAATATTTCTATAGAAGCAAGAGCTTGGATTATGCCTAATCTCTCATAGAGAAGGATGGATTATTCAAGCTTTCAGAAGACGAAGTTGATACTATATGCACTTTGACTGGAGGTAGTAACTTCGTTACAAAGTTTAGAATTAAATTCATGGCTTCACTATGCTACTTAAGACCAAATGCATGATACCAGTCTTTGACTCTCCTATGGAATCTTGCTGGAAATATAAATGTATTCAGGTCCAGACGTGAAAAACCTTCTGAAAGATGCTTGAACGGGCTCTAAAACAAGGCACAAACATTACATTCCTTAAAAAGGAGGATATGCGGTCTGTAACCCTTTAGTTTGGATTATAATAGTAAAGTATACTATATTTCCTTTCTCAGGGTAATAATCCTTCGTTTCTTTCATGCTTATATTTTTTTTATAGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTAACTTTGAATCGCAGAAGGTGAGCTGGCTGGCTGAAGCTTGGACTAATCTGTACTTGTAGATAGCACAGGATTTAAACCAACTACCATTGCCATTGTCACTGTTTCCAAGAAGATTTTTGGTTGGCCTTTTTATAGAGGTGCATTTTTTCACTAAATCCATGAATTTTGTTGTTAGTGGTTTCTTTTTTCATCTATTTTTTTCTATCATGCATTCGAAGATATCTTCAAGTAATGAAAATAAAACTACTGTACGACTTATGTGCCAACTTCTCGTTATTATTATTATTATTTTAACTGATTGATGATGTGATTTTAAGATTTTAATAACATGAATTTGTGTACTCATTTTATCTAAACCTACACCTAAACCTATCTAATTTGTGTATTGATAGCAGCAGGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

mRNA sequence

ATGAAACAGCCGGAGTCGTTTTATATTTTTCTGTATAATGATCCAAACATATGCAAGGAGCGGACTTGCCGGAGAAAATTTGCATTCCCGTCTGTTTTCAGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

Coding sequence (CDS)

ATGAAACAGCCGGAGTCGTTTTATATTTTTCTGTATAATGATCCAAACATATGCAAGGAGCGGACTTGCCGGAGAAAATTTGCATTCCCGTCTGTTTTCAGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

Protein sequence

MKQPESFYIFLYNDPNICKERTCRRKFAFPSVFRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI
Homology
[Close]
BLAST of CsGy1G031760 vs. NCBI nr
Match: KGN66734.1 (hypothetical protein Csa_1G666440 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 7.5e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 34 RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI 78
          RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI
Sbjct: 21 RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI 64

[Close]
BLAST of CsGy1G031760 vs. TrEMBL
Match: tr|A0A0A0M0A7|A0A0A0M0A7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666440 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 34 RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI 78
          RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI
Sbjct: 21 RILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI 64

The following BLAST results are available for this feature:
BLAST of CsGy1G031760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66734.17.5e-18100.00hypothetical protein Csa_1G666440 [Cucumis sativus][more]
BLAST of CsGy1G031760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G031760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G031760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M0A7|A0A0A0M0A7_CUCSA5.0e-18100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666440 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G031760.1CsGy1G031760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G031760Csa1G666440Cucumber (Chinese Long) v2cgybcuB002
CsGy1G031760CSPI01G32980Wild cucumber (PI 183967)cgybcpiB002
CsGy1G031760CsaV3_1G045090Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G031760Silver-seed gourdcarcgybB0293
CsGy1G031760Silver-seed gourdcarcgybB0899
CsGy1G031760Wax gourdcgybwgoB100
CsGy1G031760Wax gourdcgybwgoB113
CsGy1G031760Cucurbita maxima (Rimu)cgybcmaB019
CsGy1G031760Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G031760Cucurbita moschata (Rifu)cgybcmoB018
CsGy1G031760Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G031760Cucurbita pepo (Zucchini)cgybcpeB048
CsGy1G031760Cucurbita pepo (Zucchini)cgybcpeB112
CsGy1G031760Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G031760Melon (DHL92) v3.5.1cgybmeB040
CsGy1G031760Melon (DHL92) v3.6.1cgybmedB034
CsGy1G031760Watermelon (97103) v1cgybwmB031