CsGy1G030760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G030760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 29245860 .. 29246169 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTGAGTTTTGAGGCGATGAAAGGGGCAGGAGTTGAGGGGTTAGGTGGATGTGTGGTGGGGATTGGTGGAGAAGGAAACGGCCGGCGACTATAATTTCTACAGGTTTGAAGAGCTTTTGGGTATGGTGGAGAAATACGAGATGAAAGTTCACCTGTCTATTTGTGCACCACCCTTGGTTCAAGCTTTAACCTTGCTGCTTGCTGCTGTTCGAAGAAGCCAACCGTGGTTCGACTTCATTGGTTCAAGGCGACTTCTCACATTAAATTCGTCTCAAAACTCATCCAAAAGATTTTTAAGCCTCTAA

mRNA sequence

ATGGACGTGAGTTTTGAGGCGATGAAAGGGGCAGGAGTTGAGGGGTTTGAAGAGCTTTTGGGTATGGTGGAGAAATACGAGATGAAAGTTCACCTGTCTATTTGTGCACCACCCTTGGTTCAAGCTTTAACCTTGCTGCTTGCTGCTGTTCGAAGAAGCCAACCGTGGTTCGACTTCATTGGTTCAAGGCGACTTCTCACATTAAATTCGTCTCAAAACTCATCCAAAAGATTTTTAAGCCTCTAA

Coding sequence (CDS)

ATGGACGTGAGTTTTGAGGCGATGAAAGGGGCAGGAGTTGAGGGGTTTGAAGAGCTTTTGGGTATGGTGGAGAAATACGAGATGAAAGTTCACCTGTCTATTTGTGCACCACCCTTGGTTCAAGCTTTAACCTTGCTGCTTGCTGCTGTTCGAAGAAGCCAACCGTGGTTCGACTTCATTGGTTCAAGGCGACTTCTCACATTAAATTCGTCTCAAAACTCATCCAAAAGATTTTTAAGCCTCTAA

Protein sequence

MDVSFEAMKGAGVEGFEELLGMVEKYEMKVHLSICAPPLVQALTLLLAAVRRSQPWFDFIGSRRLLTLNSSQNSSKRFLSL
Homology
[Close]
BLAST of CsGy1G030760 vs. NCBI nr
Match: KGN66609.1 (hypothetical protein Csa_1G641030 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 43/54 (79.63%), Postives = 43/54 (79.63%), Query Frame = 0 

Query: 1  MDVSFEAMKGAGVEG-------FEELLGMVEKYEMKVHLSICAPPLVQALTLLL 48
          MDVSFEAMKGAG          FEELLGMVEKYEMKVHLSICAPPLVQAL LLL
Sbjct: 1  MDVSFEAMKGAGETAGDYNFYRFEELLGMVEKYEMKVHLSICAPPLVQALALLL 54

[Close]
BLAST of CsGy1G030760 vs. TrEMBL
Match: tr|A0A0A0LZZ7|A0A0A0LZZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G641030 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.3e-12
Identity = 43/54 (79.63%), Postives = 43/54 (79.63%), Query Frame = 0 

Query: 1  MDVSFEAMKGAGVEG-------FEELLGMVEKYEMKVHLSICAPPLVQALTLLL 48
          MDVSFEAMKGAG          FEELLGMVEKYEMKVHLSICAPPLVQAL LLL
Sbjct: 1  MDVSFEAMKGAGETAGDYNFYRFEELLGMVEKYEMKVHLSICAPPLVQALALLL 54

The following BLAST results are available for this feature:
BLAST of CsGy1G030760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66609.11.1e-1179.63hypothetical protein Csa_1G641030 [Cucumis sativus][more]
BLAST of CsGy1G030760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G030760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G030760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LZZ7|A0A0A0LZZ7_CUCSA7.3e-1279.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G641030 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030760.1CsGy1G030760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G030760CsaV3_1G043990Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G030760Silver-seed gourdcarcgybB0542
CsGy1G030760Silver-seed gourdcarcgybB0955
CsGy1G030760Watermelon (97103) v2cgybwmbB046
CsGy1G030760Wax gourdcgybwgoB094
CsGy1G030760Cucurbita maxima (Rimu)cgybcmaB013
CsGy1G030760Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G030760Cucurbita moschata (Rifu)cgybcmoB013
CsGy1G030760Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G030760Cucurbita pepo (Zucchini)cgybcpeB002
CsGy1G030760Cucurbita pepo (Zucchini)cgybcpeB039
CsGy1G030760Cucumber (Chinese Long) v2cgybcuB002
CsGy1G030760Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G030760Melon (DHL92) v3.5.1cgybmeB038
CsGy1G030760Melon (DHL92) v3.5.1cgybmeB040
CsGy1G030760Melon (DHL92) v3.6.1cgybmedB032
CsGy1G030760Melon (DHL92) v3.6.1cgybmedB034
CsGy1G030760Watermelon (Charleston Gray)cgybwcgB043
CsGy1G030760Watermelon (97103) v1cgybwmB018
CsGy1G030760Wild cucumber (PI 183967)cgybcpiB002