CsGy1G030150 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G030150
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein At5g01110
LocationChr1 : 28327869 .. 28331567 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTCATCGACTTCCTCTCCCAAATTCCACTTTCAGAAGTGGAATTCTCTCATCAAAATTCACATCTTCAACTCCTTTACTTCCTGCTATTTTCAATTCTTTCACACTTCACACTATCTACTCTCCTTCAAATACTACCCTTCGATTCCTCCAAACCCATTCTGCTCCAGCACCTCCTCATCCTGTCTCTTCTTCACTCTCTCCTTCGGATTCCTTTCTACTGGAAAAAATTTTGTTCACTTTGAAGCAGAATAATGTAAGTTATTTACGCGATTCTCTTTTACGCCTCAGCCCTTCTCTTTTACTCCAAGTTCTCTTTAGGTGTCGTGGAGATTTACATTTAGGCTTAAAATTCATTGGTTTAGTTTCATATCATTTCCCGAATTTCAAGCATTCCTCACTTTCTTTGAGTGCAATGGTTCATTTTTTAGTGCGCGGCAGGAGGCTCTCAGAAGCCCAAGCTTGCATTCTTAGGATGGTGAGGAAAAGCGGGGTCTCACGAGTTAAGGTCGTCGAATCCTTAATTTCGACGTGTTTTTATTTCGGGTCGGTTGGTTTGATTTATGATTTGTTAGTAAGGACTTACGTGCAAGCTAAAAAGTTAAGAGAAGGGTCTGAAGCTTTTCAAATTTTGAGGAGAAAAGGAGTTTCTGTTTCTATAAATGCTTGTAACAAGCTCCTTGGTGGTCTTGTGAGGACTGGGTGGGTTGATTTAGCTTGGGAAATATATGGGGAAGTTGTGAGAGGGGGTATTGAGTTGAATGTTTATACACTCAATATTATGGTTAATGCTCTTTGTAAAGACCGCAAATTTGAGAATGTGATGTTCTTCTTATCAGATATGGAAGGAAAAGGAGTTTTTGCTGACATTGTGACATATAATACACTCATCAATGCTTACTGTCGTGAAGGACTTGTTGAAGAAGCATTCCAATTGTTGAATTCATTCTCCAGTAGGGGTATGGAACCGGGCCTTCTAACTTATAATGCTATCCTATATGGCCTGTGTAAGATAGGTAAGTATGACAGGGCAAAGGATGTTTTAATTGAGATGTTGCAACTTGGATTAACGCCTAATGCTGCTACATATAACACATTGCTAGTTGAGATTTGTCGAAGAGACAATATTTTAGAAGCTCAAGAGATATTTGATGAAATGTCACGTCGTGGTGTTCTTCCTGATCTGGTTAGTTTTAGTTCTCTGATTGGTGTGCTTGCGAGGAATGGACACCTTTATCAGGCTTTGATGCATTTTAGAGAGATGGAAAGATCTGGTATAGTACCTGATAATGTTATTTATACTATTCTTATAGATGGGTTTTGTCGAAATGGTGCTCTTTCAGATGCTTTGAAAATGCGGGATGAGATGCTTGCTCGTGGTTGTTTCATGGATGTGGTTACATATAATACTTTTTTGAATGGATTATGCAAGAAGAAGATGTTTGCGGATGCAGATATGTTATTTAACGAAATGGTCGAGAGAGGTATGGTTCCAGACTTTTATACTTTCACCACACTCATTCGTGGATATTGCAAGGATGGAAATATGGACAAAGCGCTGAATTTGTTTGAAGCAATGGTTCGTACAAACCTGAAGCCAGATAAAGTGACATACAATACGTTGATTGATGGCTTTTGCAAAGCAGGCGAAATGGGAAGGGCCAAGGAGTTGTGGGATGATATGATCAGGAAAGATATTATCCCCGACCACATTTCCTATGGAACTGTATTAAATGGTTTTTGTAGTTCAGGCCTTTTACCTGAGGCATTGAATTTGTGTGACCAGATGCTTGAAAAGGGTATCAGACCCAATCTCGTCACTTGCAATACTTTAATTAAGGGATACTGTCGGTCCGGTGACATGCCGAAGGCATATGAATATTTGAGCAAAATGATATCAAATGGAATAATTCCTGATAGCTTCTCATATAATACTCTTATTGATGGATATTTGAAAGAAGCGAACCTAGAAAAAGCTTTCATATTGATTAATGAGATGGAAAAACGGGGGCTTCAATTTAATATTATTACATATAATTTAATTTTGAATGGATTCTGTGCCGAAGGAAAAATGCAAGAGGCTGAGCAGGTATTAAGGAAAATGATTGAGATCGGCATAAATCCTGACGGAGCCACGTACTCTTCTCTGATAAATGGTCATGTCAGCCAAGACAATATGAAGGAGGCATTTCGTTTCCATGATGAAATGCTCCAACGAGGACTGGTGCCTGATGATAGATTTTAAATTTTTACTTCATTGGATGCATGTCGACTATTTAATTAAGGCAAAGGTCTCTTTTCTCTCTTGTATGTGCATGAACCCGTACTCCACTTTCATATAACACTTTATTTGTTTATTAAATTGTAAATATAATTGGTAGGTTACGTTTTCTGATTGCTTAATATGAGGTGCCATGTTCACACATACTGAAATATTCTCGTAAATATATCTCTGCTCAATTTTTAAAGCATCTACGTAATCTTTCTTGCAGGGATACTTCACATGTAATCTGAACCTGAATGCTGATACTTTTGCTTTGCTGGGTTTGACTCCTTAATTCCAGAGAATCAAATTTTAGTTATCACAGGTTATGAATCTGGTTTATTTGCCAACACCCCCCTTGCCCAATCTCCTTTTTGGTTAGAAACACTTCATATATTATATGAAATTACAATAAAGGGGAGTATTTCCAAGTCCTAAATTGTAACTAGTTATTCAAATAAGCAAAAAGAGGTTTAACACTATAGTTGTTAGAGGGAGCGATGATGCCATGCGTCAATTGAAATTTGGTAAAATAAAGTCTTTAGAAGTTACCAGCAAACGTGCGACTCTGGGTTTTTCCCTTTTTTCAAAGAGGACACCATCTCAGGGATAGGGAGCCATGGAAGTGGCTTTTGCATATTGTCATAATTGTTTCAGCTTGCATGGTAATTTCCTACTTCCTAGAGGTAGAACCTGATTTTTTTCTTTTAATTTTTTACCTTTCCAGGTAAAGAGGAGAGAAGACTTGTGAGCAAGAGTTGGTCACGAGTTGATTAAATCATCACAAAGAGATTAGATTGTAAAGGAGCCATTTGATCGTGGCAGCCAAAACATTTTCGTTGTTGCATCGAGAATTGGAAGGTACGGGAAACAAAAGAGGGACATGATTCATGTAGATGAATCTCCCAAAACGTCTTATAAAGCCAAGGTCCCAACTGTTTGTTGCTAAGTTCTAACTTCCAACCATCCTTAATGGGGGATGAGGAAAGCCAAGACAGGTATATTCACTTGCCATCGTTTTCACAATTCTTCAGTCCATCAAAAGACAGCAGCTGCTAGCGTCAGTTCGAATCCACTAGAAAAGAAAGCCGGTGAGTTGATCCGACTTTGCCGCCCAAATGAATTCATGATTAGATGTGACAAGTGACACGTGTCATTTTAATATTGGACAATTCTCACGCCTAAGAAGCAATTATTCTGGCATAGATAATCTCATTGGAAAAGTCTGTAAATAAAAGGAAGAGCTTATTTTGCTTGGTAATTTTCATATGATTTATACATATTGTTGATGAGATTCAAGTTGTGTAAATCTTCTAATGCGTTGATATTGCAATGCGTTATGGTTAAAATGTATTCACTAATGTGTTGGGGAAAAACCTTACTCACTTGACACTTTTGTCTAATTTTCAAATGTTTTGTTCCATTTTCTCC

mRNA sequence

ATGGCTGTTCATCGACTTCCTCTCCCAAATTCCACTTTCAGAAGTGGAATTCTCTCATCAAAATTCACATCTTCAACTCCTTTACTTCCTGCTATTTTCAATTCTTTCACACTTCACACTATCTACTCTCCTTCAAATACTACCCTTCGATTCCTCCAAACCCATTCTGCTCCAGCACCTCCTCATCCTGTCTCTTCTTCACTCTCTCCTTCGGATTCCTTTCTACTGGAAAAAATTTTGTTCACTTTGAAGCAGAATAATGTAAGTTATTTACGCGATTCTCTTTTACGCCTCAGCCCTTCTCTTTTACTCCAAGTTCTCTTTAGGTGTCGTGGAGATTTACATTTAGGCTTAAAATTCATTGGTTTAGTTTCATATCATTTCCCGAATTTCAAGCATTCCTCACTTTCTTTGAGTGCAATGGTTCATTTTTTAGTGCGCGGCAGGAGGCTCTCAGAAGCCCAAGCTTGCATTCTTAGGATGGTGAGGAAAAGCGGGGTCTCACGAGTTAAGGTCGTCGAATCCTTAATTTCGACGTGTTTTTATTTCGGGTCGGTTGGTTTGATTTATGATTTGTTAGTAAGGACTTACGTGCAAGCTAAAAAGTTAAGAGAAGGGTCTGAAGCTTTTCAAATTTTGAGGAGAAAAGGAGTTTCTGTTTCTATAAATGCTTGTAACAAGCTCCTTGGTGGTCTTGTGAGGACTGGGTGGGTTGATTTAGCTTGGGAAATATATGGGGAAGTTGTGAGAGGGGGTATTGAGTTGAATGTTTATACACTCAATATTATGGTTAATGCTCTTTGTAAAGACCGCAAATTTGAGAATGTGATGTTCTTCTTATCAGATATGGAAGGAAAAGGAGTTTTTGCTGACATTGTGACATATAATACACTCATCAATGCTTACTGTCGTGAAGGACTTGTTGAAGAAGCATTCCAATTGTTGAATTCATTCTCCAGTAGGGGTATGGAACCGGGCCTTCTAACTTATAATGCTATCCTATATGGCCTGTGTAAGATAGGTAAGTATGACAGGGCAAAGGATGTTTTAATTGAGATGTTGCAACTTGGATTAACGCCTAATGCTGCTACATATAACACATTGCTAGTTGAGATTTGTCGAAGAGACAATATTTTAGAAGCTCAAGAGATATTTGATGAAATGTCACGTCGTGGTGTTCTTCCTGATCTGGTTAGTTTTAGTTCTCTGATTGGTGTGCTTGCGAGGAATGGACACCTTTATCAGGCTTTGATGCATTTTAGAGAGATGGAAAGATCTGGTATAGTACCTGATAATGTTATTTATACTATTCTTATAGATGGGTTTTGTCGAAATGGTGCTCTTTCAGATGCTTTGAAAATGCGGGATGAGATGCTTGCTCGTGGTTGTTTCATGGATGTGGTTACATATAATACTTTTTTGAATGGATTATGCAAGAAGAAGATGTTTGCGGATGCAGATATGTTATTTAACGAAATGGTCGAGAGAGGTATGGTTCCAGACTTTTATACTTTCACCACACTCATTCGTGGATATTGCAAGGATGGAAATATGGACAAAGCGCTGAATTTGTTTGAAGCAATGGTTCGTACAAACCTGAAGCCAGATAAAGTGACATACAATACGTTGATTGATGGCTTTTGCAAAGCAGGCGAAATGGGAAGGGCCAAGGAGTTGTGGGATGATATGATCAGGAAAGATATTATCCCCGACCACATTTCCTATGGAACTGTATTAAATGGTTTTTGTAGTTCAGGCCTTTTACCTGAGGCATTGAATTTGTGTGACCAGATGCTTGAAAAGGGTATCAGACCCAATCTCGTCACTTGCAATACTTTAATTAAGGGATACTGTCGGTCCGGTGACATGCCGAAGGCATATGAATATTTGAGCAAAATGATATCAAATGGAATAATTCCTGATAGCTTCTCATATAATACTCTTATTGATGGATATTTGAAAGAAGCGAACCTAGAAAAAGCTTTCATATTGATTAATGAGATGGAAAAACGGGGGCTTCAATTTAATATTATTACATATAATTTAATTTTGAATGGATTCTGTGCCGAAGGAAAAATGCAAGAGGCTGAGCAGGTATTAAGGAAAATGATTGAGATCGGCATAAATCCTGACGGAGCCACGTACTCTTCTCTGATAAATGGTCATGTCAGCCAAGACAATATGAAGGAGGCATTTCGTTTCCATGATGAAATGCTCCAACGAGGACTGGGATACTTCACATGTAATCTGAACCTGAATGCTGATACTTTTGCTTTGCTGGGTAAAGAGGAGAGAAGACTTGTGAGCAAGAGTTGGTCACGAGTTGATTAAATCATCACAAAGAGATTAGATTGTAAAGGAGCCATTTGATCGTGGCAGCCAAAACATTTTCGTTGTTGCATCGAGAATTGGAAGGTACGGGAAACAAAAGAGGGACATGATTCATGTAGATGAATCTCCCAAAACGTCTTATAAAGCCAAGGTCCCAACTGTTTGTTGCTAAGTTCTAACTTCCAACCATCCTTAATGGGGGATGAGGAAAGCCAAGACAGGTATATTCACTTGCCATCGTTTTCACAATTCTTCAGTCCATCAAAAGACAGCAGCTGCTAGCGTCAGTTCGAATCCACTAGAAAAGAAAGCCGGTGAGTTGATCCGACTTTGCCGCCCAAATGAATTCATGATTAGATGTGACAAGTGACACGTGTCATTTTAATATTGGACAATTCTCACGCCTAAGAAGCAATTATTCTGGCATAGATAATCTCATTGGAAAAGTCTGTAAATAAAAGGAAGAGCTTATTTTGCTTGGTAATTTTCATATGATTTATACATATTGTTGATGAGATTCAAGTTGTGTAAATCTTCTAATGCGTTGATATTGCAATGCGTTATGGTTAAAATGTATTCACTAATGTGTTGGGGAAAAACCTTACTCACTTGACACTTTTGTCTAATTTTCAAATGTTTTGTTCCATTTTCTCC

Coding sequence (CDS)

ATGGCTGTTCATCGACTTCCTCTCCCAAATTCCACTTTCAGAAGTGGAATTCTCTCATCAAAATTCACATCTTCAACTCCTTTACTTCCTGCTATTTTCAATTCTTTCACACTTCACACTATCTACTCTCCTTCAAATACTACCCTTCGATTCCTCCAAACCCATTCTGCTCCAGCACCTCCTCATCCTGTCTCTTCTTCACTCTCTCCTTCGGATTCCTTTCTACTGGAAAAAATTTTGTTCACTTTGAAGCAGAATAATGTAAGTTATTTACGCGATTCTCTTTTACGCCTCAGCCCTTCTCTTTTACTCCAAGTTCTCTTTAGGTGTCGTGGAGATTTACATTTAGGCTTAAAATTCATTGGTTTAGTTTCATATCATTTCCCGAATTTCAAGCATTCCTCACTTTCTTTGAGTGCAATGGTTCATTTTTTAGTGCGCGGCAGGAGGCTCTCAGAAGCCCAAGCTTGCATTCTTAGGATGGTGAGGAAAAGCGGGGTCTCACGAGTTAAGGTCGTCGAATCCTTAATTTCGACGTGTTTTTATTTCGGGTCGGTTGGTTTGATTTATGATTTGTTAGTAAGGACTTACGTGCAAGCTAAAAAGTTAAGAGAAGGGTCTGAAGCTTTTCAAATTTTGAGGAGAAAAGGAGTTTCTGTTTCTATAAATGCTTGTAACAAGCTCCTTGGTGGTCTTGTGAGGACTGGGTGGGTTGATTTAGCTTGGGAAATATATGGGGAAGTTGTGAGAGGGGGTATTGAGTTGAATGTTTATACACTCAATATTATGGTTAATGCTCTTTGTAAAGACCGCAAATTTGAGAATGTGATGTTCTTCTTATCAGATATGGAAGGAAAAGGAGTTTTTGCTGACATTGTGACATATAATACACTCATCAATGCTTACTGTCGTGAAGGACTTGTTGAAGAAGCATTCCAATTGTTGAATTCATTCTCCAGTAGGGGTATGGAACCGGGCCTTCTAACTTATAATGCTATCCTATATGGCCTGTGTAAGATAGGTAAGTATGACAGGGCAAAGGATGTTTTAATTGAGATGTTGCAACTTGGATTAACGCCTAATGCTGCTACATATAACACATTGCTAGTTGAGATTTGTCGAAGAGACAATATTTTAGAAGCTCAAGAGATATTTGATGAAATGTCACGTCGTGGTGTTCTTCCTGATCTGGTTAGTTTTAGTTCTCTGATTGGTGTGCTTGCGAGGAATGGACACCTTTATCAGGCTTTGATGCATTTTAGAGAGATGGAAAGATCTGGTATAGTACCTGATAATGTTATTTATACTATTCTTATAGATGGGTTTTGTCGAAATGGTGCTCTTTCAGATGCTTTGAAAATGCGGGATGAGATGCTTGCTCGTGGTTGTTTCATGGATGTGGTTACATATAATACTTTTTTGAATGGATTATGCAAGAAGAAGATGTTTGCGGATGCAGATATGTTATTTAACGAAATGGTCGAGAGAGGTATGGTTCCAGACTTTTATACTTTCACCACACTCATTCGTGGATATTGCAAGGATGGAAATATGGACAAAGCGCTGAATTTGTTTGAAGCAATGGTTCGTACAAACCTGAAGCCAGATAAAGTGACATACAATACGTTGATTGATGGCTTTTGCAAAGCAGGCGAAATGGGAAGGGCCAAGGAGTTGTGGGATGATATGATCAGGAAAGATATTATCCCCGACCACATTTCCTATGGAACTGTATTAAATGGTTTTTGTAGTTCAGGCCTTTTACCTGAGGCATTGAATTTGTGTGACCAGATGCTTGAAAAGGGTATCAGACCCAATCTCGTCACTTGCAATACTTTAATTAAGGGATACTGTCGGTCCGGTGACATGCCGAAGGCATATGAATATTTGAGCAAAATGATATCAAATGGAATAATTCCTGATAGCTTCTCATATAATACTCTTATTGATGGATATTTGAAAGAAGCGAACCTAGAAAAAGCTTTCATATTGATTAATGAGATGGAAAAACGGGGGCTTCAATTTAATATTATTACATATAATTTAATTTTGAATGGATTCTGTGCCGAAGGAAAAATGCAAGAGGCTGAGCAGGTATTAAGGAAAATGATTGAGATCGGCATAAATCCTGACGGAGCCACGTACTCTTCTCTGATAAATGGTCATGTCAGCCAAGACAATATGAAGGAGGCATTTCGTTTCCATGATGAAATGCTCCAACGAGGACTGGGATACTTCACATGTAATCTGAACCTGAATGCTGATACTTTTGCTTTGCTGGGTAAAGAGGAGAGAAGACTTGTGAGCAAGAGTTGGTCACGAGTTGATTAA

Protein sequence

MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLGYFTCNLNLNADTFALLGKEERRLVSKSWSRVD
Homology
[Close]
BLAST of CsGy1G030150 vs. NCBI nr
Match: XP_004139059.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis sativus] >XP_011660161.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 2.7e-131
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAP 60
           MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNT LRFLQTHSAPAP
Sbjct: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTALRFLQTHSAPAP 60

Query: 61  PHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKF 120
           PHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKF
Sbjct: 61  PHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKF 120

Query: 121 IGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTC 180
           IGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTC
Sbjct: 121 IGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTC 180

Query: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240
           FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL
Sbjct: 181 FYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 241 AWEIYGEVV 250
           AWEIYGEVV
Sbjct: 241 AWEIYGEVV 249

[Close]
BLAST of CsGy1G030150 vs. NCBI nr
Match: XP_008450352.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis melo] >XP_008450353.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis melo] >XP_008450354.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis melo] >XP_008450355.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 3.1e-119
Identity = 231/250 (92.40%), Postives = 237/250 (94.80%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAP 60
           MAVHRLPLP STFRSGILSSKFTSSTPLLP  FNSF LHTIYSPSNT LRFLQT S P P
Sbjct: 1   MAVHRLPLPKSTFRSGILSSKFTSSTPLLPTNFNSFKLHTIYSPSNTALRFLQTQSTPGP 60

Query: 61  PH-PVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLK 120
            + PVSSS+SPSDSFLLEKILF+LKQNNVSYLRDSLLRLSPSLLLQVLFRCR DLHLGLK
Sbjct: 61  LYDPVSSSVSPSDSFLLEKILFSLKQNNVSYLRDSLLRLSPSLLLQVLFRCREDLHLGLK 120

Query: 121 FIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST 180
           FIGLVSY+FPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRK GVSRVKVVESLIST
Sbjct: 121 FIGLVSYYFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKRGVSRVKVVESLIST 180

Query: 181 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240
           CF FGS+GL+YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD
Sbjct: 181 CFNFGSIGLVYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240

Query: 241 LAWEIYGEVV 250
           LAWEIYGEVV
Sbjct: 241 LAWEIYGEVV 250

[Close]
BLAST of CsGy1G030150 vs. NCBI nr
Match: XP_022973817.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022973822.1 pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-84
Identity = 179/252 (71.03%), Postives = 205/252 (81.35%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTH---SA 60
           MA HRLPLP  TFR+ IL+S FT +TPLL A   SFT H IYS      +F   H   S 
Sbjct: 9   MAAHRLPLPKPTFRTRILASTFTYATPLLRANSISFTFHLIYS----LPKFHSIHDEASG 68

Query: 61  PAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLG 120
            +   PVSSS+S S+SFL+EKILF+LKQNNVS L +SL RL+PS L++VL+ CR +LHLG
Sbjct: 69  SSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENLHLG 128

Query: 121 LKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLI 180
           LKFI LVS   PN KHSS+SLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRV+VVES++
Sbjct: 129 LKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVESIV 188

Query: 181 STCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGW 240
           STC  FGS+GL+ DLLVRTYVQA+KLREGSEAF+IL+ KGVSVSINACN LLGGLV+ GW
Sbjct: 189 STCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILKSKGVSVSINACNSLLGGLVKIGW 248

Query: 241 VDLAWEIYGEVV 250
           VDLAWEI+GEVV
Sbjct: 249 VDLAWEIFGEVV 256

[Close]
BLAST of CsGy1G030150 vs. NCBI nr
Match: XP_023530884.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.8 bits (826), Expect = 3.2e-84
Identity = 176/250 (70.40%), Postives = 203/250 (81.20%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAP 60
           MA HRLPLP  TFR+ IL+  FT +TPLL A F SFT H  YS        +   +A + 
Sbjct: 8   MAAHRLPLPKPTFRTRILAPTFTYATPLLRANFISFTFHLFYSLPK--FHSIHDEAAGSS 67

Query: 61  PH-PVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLK 120
            H PVSSS+S S+SFL+EKILF+LKQNNVS L +SL RL+PS L++VL+ CR +LHLGLK
Sbjct: 68  NHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENLHLGLK 127

Query: 121 FIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST 180
           FI L+S   PN KHSS+SLSAMVHFLVRGRRLSEAQ CILRMVRKSGVSRV+VVES++ST
Sbjct: 128 FIDLISSSCPNLKHSSISLSAMVHFLVRGRRLSEAQVCILRMVRKSGVSRVEVVESIVST 187

Query: 181 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240
           C  FGS+GL+ DLLVRTYVQA+KLREGSEAF+ILR KGVSVSINACN LLGGLV+ GWVD
Sbjct: 188 CGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVD 247

Query: 241 LAWEIYGEVV 250
           LAWEI+GEVV
Sbjct: 248 LAWEIFGEVV 255

[Close]
BLAST of CsGy1G030150 vs. NCBI nr
Match: XP_022933790.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 6.1e-83
Identity = 175/250 (70.00%), Postives = 203/250 (81.20%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAP 60
           MA HRLPLP  TFR+ I++S  T +TPLL +   SFT H  YS        +   +A + 
Sbjct: 8   MAAHRLPLPKPTFRTRIIASTVTYATPLLRSNSISFTFHLFYSLPK--FHSIHDEAAGSS 67

Query: 61  PH-PVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLK 120
            H PVSSS+S S+SFL+EKILF+LKQNNVS L +SL RL+PS L++VL+ CR +LHLGLK
Sbjct: 68  NHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENLHLGLK 127

Query: 121 FIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST 180
           FI LVS   PN KHSS+SLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRV+VV+SL+ST
Sbjct: 128 FIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQSLVST 187

Query: 181 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240
           C  FGS+GL+ DLLVRTYVQA+KLREGSEAF+ILR KGVSVSINACN LLGGLV+ GWVD
Sbjct: 188 CGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVD 247

Query: 241 LAWEIYGEVV 250
           LAWEI+GEVV
Sbjct: 248 LAWEIFGEVV 255

[Close]
BLAST of CsGy1G030150 vs. TAIR10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 5.0e-55
Identity = 106/175 (60.57%), Postives = 141/175 (80.57%), Query Frame = 0 

Query: 71  SDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPN 130
           SDSFL+EKI F+LKQ N + +R+ L+RL+P  +++VL+RCR DL LG +F+  + +HFPN
Sbjct: 50  SDSFLVEKICFSLKQGN-NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN 109

Query: 131 FKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190
           FKH+SLSLSAM+H LVR  RLS+AQ+C+LRM+R+SGVSR+++V SL ST    GS   ++
Sbjct: 110 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 169

Query: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIY 246
           DLL+RTYVQA+KLRE  EAF +LR KG +VSI+ACN L+G LVR GWV+LAW +Y
Sbjct: 170 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

[Close]
BLAST of CsGy1G030150 vs. TAIR10
Match: AT2G15980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 41/155 (26.45%), Postives = 74/155 (47.74%), Query Frame = 0 

Query: 99  SPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACI 158
           +PS   ++    R + HL L+F  L +  +    H + S S ++H L R R  S A   I
Sbjct: 70  TPSQFSEITLCLRNNPHLSLRFF-LFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEII 129

Query: 159 LRMVRKSGVSR-----VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQIL 218
              +R +         +KV  SLI +    GS   ++DLL+++ + +K++       + L
Sbjct: 130 RLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKL 189

Query: 219 RRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 249
           R +G++  I+ CN L+  + R       +++Y EV
Sbjct: 190 RSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223

[Close]
BLAST of CsGy1G030150 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.1e-07
Identity = 40/158 (25.32%), Postives = 74/158 (46.84%), Query Frame = 0 

Query: 93  DSLLRLSPSL----LLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRG 152
           D L +LS  L    +  VL + + D  L L+F        P   HS  + + ++H L + 
Sbjct: 70  DKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKN 129

Query: 153 RRLSEAQACILRMVRKSGVS-RVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGS 212
           R+   A++ +  ++   GV    KV ++L+ +     S   ++D L +T+   KK R  +
Sbjct: 130 RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNAT 189

Query: 213 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIY 246
           + F  ++  G   ++ +CN  +  L+  G VD+A   Y
Sbjct: 190 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226

[Close]
BLAST of CsGy1G030150 vs. TAIR10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 9.6e-06
Identity = 30/107 (28.04%), Postives = 55/107 (51.40%), Query Frame = 0 

Query: 143 HFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKK 202
           H LVR R    A+  +  +   SG S   V  +L++T     S   +YD+L+R Y++   
Sbjct: 120 HILVRARMYDPARHILKELSLMSGKSSF-VFGALMTTYRLCNSNPSVYDILIRVYLREGM 179

Query: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 250
           +++  E F+++   G + S+  CN +LG +V++G     W    E++
Sbjct: 180 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

[Close]
BLAST of CsGy1G030150 vs. TAIR10
Match: AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 43.9 bits (102), Expect = 5.3e-04
Identity = 47/212 (22.17%), Postives = 92/212 (43.40%), Query Frame = 0 

Query: 42  YSPSNTTLRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPS 101
           YSP+   L  L   S P       S L P  S +L + + + + + V ++ D   +L+PS
Sbjct: 22  YSPAAARLSSLAQTSTP------ESVLPPITSEILLESIRSSQWHIVEHVAD---KLTPS 81

Query: 102 LLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRM 161
           L+   L       +L   F+  +  +  +F+   L+++ +        +LS  +  + ++
Sbjct: 82  LVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVI-------SKLSSPKP-VTQL 141

Query: 162 VRKSGVSRVKVVESLISTCFYF-----GSVGLIYDLLVRTYVQAKKLREGSEAFQILRRK 221
           +++   SR   + +L                +++DLLVR   Q + + E  E F +++ K
Sbjct: 142 LKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK 201

Query: 222 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 249
           G       CN +L  L R   ++ AW  Y ++
Sbjct: 202 GFYPKTETCNHILTLLSRLNRIENAWVFYADM 216

[Close]
BLAST of CsGy1G030150 vs. Swiss-Prot
Match: sp|Q9LFC5|PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 9.0e-54
Identity = 106/175 (60.57%), Postives = 141/175 (80.57%), Query Frame = 0 

Query: 71  SDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPN 130
           SDSFL+EKI F+LKQ N + +R+ L+RL+P  +++VL+RCR DL LG +F+  + +HFPN
Sbjct: 50  SDSFLVEKICFSLKQGN-NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN 109

Query: 131 FKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190
           FKH+SLSLSAM+H LVR  RLS+AQ+C+LRM+R+SGVSR+++V SL ST    GS   ++
Sbjct: 110 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 169

Query: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIY 246
           DLL+RTYVQA+KLRE  EAF +LR KG +VSI+ACN L+G LVR GWV+LAW +Y
Sbjct: 170 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

[Close]
BLAST of CsGy1G030150 vs. Swiss-Prot
Match: sp|Q9XIM8|PP155_ARATH (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX=3702 GN=At2g15980 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-07
Identity = 41/155 (26.45%), Postives = 74/155 (47.74%), Query Frame = 0 

Query: 99  SPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACI 158
           +PS   ++    R + HL L+F  L +  +    H + S S ++H L R R  S A   I
Sbjct: 70  TPSQFSEITLCLRNNPHLSLRFF-LFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEII 129

Query: 159 LRMVRKSGVSR-----VKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQIL 218
              +R +         +KV  SLI +    GS   ++DLL+++ + +K++       + L
Sbjct: 130 RLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKL 189

Query: 219 RRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 249
           R +G++  I+ CN L+  + R       +++Y EV
Sbjct: 190 RSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223

[Close]
BLAST of CsGy1G030150 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.2e-06
Identity = 40/158 (25.32%), Postives = 74/158 (46.84%), Query Frame = 0 

Query: 93  DSLLRLSPSL----LLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRG 152
           D L +LS  L    +  VL + + D  L L+F        P   HS  + + ++H L + 
Sbjct: 70  DKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPG-SHSLETHAIVLHTLTKN 129

Query: 153 RRLSEAQACILRMVRKSGVS-RVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGS 212
           R+   A++ +  ++   GV    KV ++L+ +     S   ++D L +T+   KK R  +
Sbjct: 130 RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNAT 189

Query: 213 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIY 246
           + F  ++  G   ++ +CN  +  L+  G VD+A   Y
Sbjct: 190 DTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226

[Close]
BLAST of CsGy1G030150 vs. Swiss-Prot
Match: sp|Q9LVQ5|PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-04
Identity = 30/107 (28.04%), Postives = 55/107 (51.40%), Query Frame = 0 

Query: 143 HFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKK 202
           H LVR R    A+  +  +   SG S   V  +L++T     S   +YD+L+R Y++   
Sbjct: 80  HILVRARMYDPARHILKELSLMSGKSSF-VFGALMTTYRLCNSNPSVYDILIRVYLREGM 139

Query: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 250
           +++  E F+++   G + S+  CN +LG +V++G     W    E++
Sbjct: 140 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

[Close]
BLAST of CsGy1G030150 vs. TrEMBL
Match: tr|A0A1S3BNF5|A0A1S3BNF5_CUCME (pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN=LOC103491986 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 2.0e-119
Identity = 231/250 (92.40%), Postives = 237/250 (94.80%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSPSNTTLRFLQTHSAPAP 60
           MAVHRLPLP STFRSGILSSKFTSSTPLLP  FNSF LHTIYSPSNT LRFLQT S P P
Sbjct: 1   MAVHRLPLPKSTFRSGILSSKFTSSTPLLPTNFNSFKLHTIYSPSNTALRFLQTQSTPGP 60

Query: 61  PH-PVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLK 120
            + PVSSS+SPSDSFLLEKILF+LKQNNVSYLRDSLLRLSPSLLLQVLFRCR DLHLGLK
Sbjct: 61  LYDPVSSSVSPSDSFLLEKILFSLKQNNVSYLRDSLLRLSPSLLLQVLFRCREDLHLGLK 120

Query: 121 FIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLIST 180
           FIGLVSY+FPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRK GVSRVKVVESLIST
Sbjct: 121 FIGLVSYYFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKRGVSRVKVVESLIST 180

Query: 181 CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240
           CF FGS+GL+YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD
Sbjct: 181 CFNFGSIGLVYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD 240

Query: 241 LAWEIYGEVV 250
           LAWEIYGEVV
Sbjct: 241 LAWEIYGEVV 250

[Close]
BLAST of CsGy1G030150 vs. TrEMBL
Match: tr|A0A2N9GBK4|A0A2N9GBK4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24641 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-62
Identity = 134/215 (62.33%), Postives = 163/215 (75.81%), Query Frame = 0 

Query: 35  SFTLHTIYSPSNTTLRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDS 94
           S + H+  SP N  LR LQT        P SS+ S SDSFL+EKI F+LKQ N + LR+ 
Sbjct: 32  SHSPHSFSSPPNHGLRTLQTQE-----EPTSSTPSVSDSFLVEKIFFSLKQGNTNSLRNY 91

Query: 95  LLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEA 154
           L RL+P ++++VL RCR +L LG KF+ L+  + PNFKHSS SLSAM H LVR RRLS+A
Sbjct: 92  LFRLNPLVIIEVLCRCRENLQLGQKFVDLIVLNCPNFKHSSQSLSAMAHVLVRSRRLSDA 151

Query: 155 QACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILR 214
           Q+ ILRMVRKSGVSR ++VESL+S C   G   L++DLL+RTYVQA+KLREGSEAF++LR
Sbjct: 152 QSLILRMVRKSGVSRGEIVESLVSICDNLGWNSLVFDLLIRTYVQARKLREGSEAFRVLR 211

Query: 215 RKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 250
            KG  VSINACN LLGGLV+ GWVDLAWE+YGEVV
Sbjct: 212 SKGFCVSINACNSLLGGLVKVGWVDLAWEVYGEVV 241

[Close]
BLAST of CsGy1G030150 vs. TrEMBL
Match: tr|A0A2P4J892|A0A2P4J892_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_49702 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.7e-61
Identity = 144/253 (56.92%), Postives = 177/253 (69.96%), Query Frame = 0 

Query: 1   MAVHRLPLPNSTFRSGILSSKFTSSTPLLPAIFNSFTLHTIYSP----SNTTLRFLQTHS 60
           MA  RL       R   L++    + P   A   S + H++ SP    SN  LR LQT  
Sbjct: 1   MATQRLLFQKPFLRVRTLTA---YTRPSFHAQAYSHSPHSLSSPPKPDSNHDLRTLQTQE 60

Query: 61  APAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHL 120
                 P SS+ S SDSFL+EKILF+LKQ N S LR+ L RL+P ++++VL RCR +L L
Sbjct: 61  -----EPTSSTPSVSDSFLVEKILFSLKQGNPSPLRNYLFRLNPLVVVEVLCRCRENLQL 120

Query: 121 GLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESL 180
           G KF+ L+  + PNFKHSS SLSAMVH LVR RRLS+AQ+ ILRMVRKSGVSR ++VESL
Sbjct: 121 GQKFVDLIVLNCPNFKHSSQSLSAMVHVLVRSRRLSDAQSLILRMVRKSGVSRGEIVESL 180

Query: 181 ISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 240
           +S C       L++DLL+RTYVQA+KLREGSEAF++LR KG  VSINACN LLGGLV+ G
Sbjct: 181 VSMCDNLEWSSLVFDLLIRTYVQARKLREGSEAFRVLRSKGFCVSINACNSLLGGLVKVG 240

Query: 241 WVDLAWEIYGEVV 250
           WVDLAW++YGEVV
Sbjct: 241 WVDLAWDVYGEVV 245

[Close]
BLAST of CsGy1G030150 vs. TrEMBL
Match: tr|A0A251QE44|A0A251QE44_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G102900 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.5e-58
Identity = 127/198 (64.14%), Postives = 154/198 (77.78%), Query Frame = 0 

Query: 49  LRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLF 108
           ++F +  S      P SS+ S SDS L+EKIL  LKQ N++ LR  LLRL+P L+++VL 
Sbjct: 1   MQFREVCSTATSQEPFSSA-SLSDSLLVEKILLGLKQGNLNSLRSYLLRLNPLLVVEVLN 60

Query: 109 RCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVS 168
           RCR +L LGLKFI L+  + PNFKHSS SLSAM+H LVRGRR+S+AQA ILRMVRKSGVS
Sbjct: 61  RCRENLQLGLKFIDLIVLNSPNFKHSSQSLSAMIHLLVRGRRVSDAQALILRMVRKSGVS 120

Query: 169 RVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKL 228
           RV+VV+SL+ST    GS  L++DLLVRTYVQA+KLREG E FQ+ R KG  VSINACN L
Sbjct: 121 RVEVVDSLVSTYSNCGSSSLVFDLLVRTYVQARKLREGFEVFQLFRSKGFCVSINACNSL 180

Query: 229 LGGLVRTGWVDLAWEIYG 247
           LGGLV+ GWVDLAW++YG
Sbjct: 181 LGGLVKVGWVDLAWQVYG 197

[Close]
BLAST of CsGy1G030150 vs. TrEMBL
Match: tr|A0A1U8P2A5|A0A1U8P2A5_GOSHI (pentatricopeptide repeat-containing protein At5g01110-like OS=Gossypium hirsutum OX=3635 GN=LOC107954324 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.7e-58
Identity = 126/218 (57.80%), Postives = 161/218 (73.85%), Query Frame = 0 

Query: 32  IFNSFTLHTIYSPSNTTLRFLQTHSAPAPPHPVSSSLSPSDSFLLEKILFTLKQNNVSYL 91
           +F +  L T  SP++  LR LQT   P    P        DSF++EKILF+LKQ N + L
Sbjct: 5   LFRNLPLQT--SPTHKFLRNLQTLQTPPNGEP--------DSFMVEKILFSLKQGNANSL 64

Query: 92  RDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRL 151
           R+   R++P ++++VL  CR +L LG +F+  +  +  NFKHSS+SLSAM+H LVR  RL
Sbjct: 65  RNYRFRINPLIVVEVLLHCRENLQLGKRFVDFIVLNCSNFKHSSMSLSAMIHVLVRCGRL 124

Query: 152 SEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQ 211
           S+AQA +LRMVRKSGVSRV++VESL+STC  FGS G ++DLL+R+YVQA+KLREGSEAF 
Sbjct: 125 SDAQALVLRMVRKSGVSRVEIVESLVSTCGNFGSNGSVFDLLIRSYVQARKLREGSEAFM 184

Query: 212 ILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 250
           ILR KG  VSINACN LLGGLV+ GWVDLAW++Y EVV
Sbjct: 185 ILRSKGFCVSINACNSLLGGLVKIGWVDLAWQVYNEVV 212

The following BLAST results are available for this feature:
BLAST of CsGy1G030150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139059.12.7e-13199.60PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis sativu... [more]
XP_008450352.13.1e-11992.40PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Cucumis melo] ... [more]
XP_022973817.11.5e-8471.03pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022... [more]
XP_023530884.13.2e-8470.40pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pep... [more]
XP_022933790.16.1e-8370.00pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata][more]
BLAST of CsGy1G030150 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01110.15.0e-5560.57Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G15980.11.2e-0826.45Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G26680.15.1e-0725.32Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G55840.19.6e-0628.04Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G15630.15.3e-0422.17Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy1G030150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LFC5|PP360_ARATH9.0e-5460.57Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... [more]
sp|Q9XIM8|PP155_ARATH2.2e-0726.45Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX... [more]
sp|Q9SZ10|PP338_ARATH9.2e-0625.32Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
sp|Q9LVQ5|PP432_ARATH1.7e-0428.04Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
BLAST of CsGy1G030150 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BNF5|A0A1S3BNF5_CUCME2.0e-11992.40pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9GBK4|A0A2N9GBK4_FAGSY3.0e-6262.33Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24641 PE=4 SV=1[more]
tr|A0A2P4J892|A0A2P4J892_QUESU9.7e-6156.92Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_4... [more]
tr|A0A251QE44|A0A251QE44_PRUPE4.5e-5864.14Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G102900 PE=4 SV=1[more]
tr|A0A1U8P2A5|A0A1U8P2A5_GOSHI7.7e-5857.80pentatricopeptide repeat-containing protein At5g01110-like OS=Gossypium hirsutum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030150.1CsGy1G030150.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 423..494
e-value: 7.5E-22
score: 79.7
coord: 355..422
e-value: 4.7E-15
score: 57.5
coord: 495..565
e-value: 2.2E-27
score: 97.8
coord: 566..633
e-value: 1.5E-19
score: 72.2
coord: 634..703
e-value: 1.1E-21
score: 79.2
coord: 281..354
e-value: 1.3E-21
score: 78.9
coord: 704..760
e-value: 6.3E-6
score: 27.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 187..280
e-value: 5.4E-15
score: 57.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 360..408
e-value: 7.1E-11
score: 42.0
coord: 222..269
e-value: 2.0E-9
score: 37.4
coord: 640..688
e-value: 9.9E-17
score: 60.8
coord: 466..514
e-value: 1.8E-18
score: 66.3
coord: 535..584
e-value: 3.1E-16
score: 59.2
coord: 291..339
e-value: 2.3E-15
score: 56.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 714..743
e-value: 7.4E-6
score: 25.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 538..571
e-value: 2.1E-11
score: 41.2
coord: 714..743
e-value: 1.3E-5
score: 23.0
coord: 329..362
e-value: 3.5E-7
score: 28.0
coord: 573..606
e-value: 8.5E-7
score: 26.8
coord: 468..501
e-value: 2.1E-11
score: 41.3
coord: 364..396
e-value: 1.0E-4
score: 20.3
coord: 433..467
e-value: 6.8E-8
score: 30.2
coord: 293..325
e-value: 4.3E-10
score: 37.1
coord: 398..431
e-value: 7.1E-5
score: 20.7
coord: 258..291
e-value: 0.0011
score: 16.9
coord: 608..642
e-value: 4.4E-10
score: 37.1
coord: 224..257
e-value: 5.1E-4
score: 18.0
coord: 678..711
e-value: 3.0E-7
score: 28.2
coord: 503..536
e-value: 3.1E-10
score: 37.6
coord: 643..676
e-value: 3.3E-6
score: 24.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 601..633
e-value: 9.4E-11
score: 41.1
coord: 427..458
e-value: 2.6E-12
score: 46.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 13.976
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 11.367
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 7.245
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 13.658
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 11.718
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 11.871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 9.821
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 641..675
score: 11.751
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..605
score: 12.266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 711..745
score: 10.249
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 676..710
score: 13.362
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 13.45
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 8.955
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 606..640
score: 13.241
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..570
score: 13.833
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 134..169
score: 6.665
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 11.783
NoneNo IPR availablePANTHERPTHR24015:SF770SUBFAMILY NOT NAMEDcoord: 129..721
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 129..721
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 581..753

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G030150Cla007371Watermelon (97103) v1cgybwmB024
CsGy1G030150Csa1G627440Cucumber (Chinese Long) v2cgybcuB002
CsGy1G030150MELO3C015131Melon (DHL92) v3.5.1cgybmeB038
CsGy1G030150ClCG03G012670Watermelon (Charleston Gray)cgybwcgB043
CsGy1G030150CSPI01G30890Wild cucumber (PI 183967)cgybcpiB002
CsGy1G030150CmaCh11G008780Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G030150CmoCh11G008870Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G030150Lsi06G005730Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G030150Cp4.1LG04g12340Cucurbita pepo (Zucchini)cgybcpeB125
CsGy1G030150MELO3C015131.2Melon (DHL92) v3.6.1cgybmedB032
CsGy1G030150CsaV3_1G043280Cucumber (Chinese Long) v3cgybcucB001
CsGy1G030150Bhi02G001255Wax gourdcgybwgoB094
CsGy1G030150Carg25420Silver-seed gourdcarcgybB0433
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G030150Cucurbita maxima (Rimu)cgybcmaB013
CsGy1G030150Cucurbita maxima (Rimu)cgybcmaB116
CsGy1G030150Cucurbita maxima (Rimu)cgybcmaB120
CsGy1G030150Cucurbita moschata (Rifu)cgybcmoB013
CsGy1G030150Cucurbita moschata (Rifu)cgybcmoB108
CsGy1G030150Cucurbita moschata (Rifu)cgybcmoB110
CsGy1G030150Cucurbita pepo (Zucchini)cgybcpeB037
CsGy1G030150Cucurbita pepo (Zucchini)cgybcpeB039
CsGy1G030150Cucurbita pepo (Zucchini)cgybcpeB137
CsGy1G030150Bottle gourd (USVL1VR-Ls)cgyblsiB004
CsGy1G030150Melon (DHL92) v3.5.1cgybmeB064
CsGy1G030150Melon (DHL92) v3.6.1cgybmedB060
CsGy1G030150Watermelon (97103) v1cgybwmB073
CsGy1G030150Silver-seed gourdcarcgybB0527
CsGy1G030150Silver-seed gourdcarcgybB0905
CsGy1G030150Silver-seed gourdcarcgybB0955
CsGy1G030150Watermelon (97103) v2cgybwmbB029
CsGy1G030150Watermelon (97103) v2cgybwmbB041