CsGy1G030120 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G030120
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
Location	Chr1 : 28301655 .. 28306326 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATGAAGTGTCATCAAATGAATGGTCCGACAAATAAAGTGTCAAGTGGACTTAGAAGTGCCATGATGAGTAGGGGTAGGCCAGCTGCTCCCATTACTAAATTCATAGTATTTGGCACCAAAAAGCACTTTCCAAAGAACATTCTCTTCATGAAGAAATCTCCAAATTGTATGTCCTAACGCTTTTAAGATCATCGACTTGATGACAACTTATCTAGGATATCCTATGGCCTATGCGGTTTCATGTGTTAAGGAAAATTAGGATTTATGATTATTATTATTTTCCTTTTATGTATTTTGCTTTAGTAGGTTTTTTGAGATCTATTTATTTTCCTACATAAAAAGTCATTATTTAGTATGTACTATGAATTATTATATTTAATAATATATAAAATTAACATGGTATCAGAGCTTAGGGTTTTGTCTCATTGAACCCTAGCAGTCACATTCTTCAATCTCTGCCTTCGTTGATCAGTCATCGATGGAGGCAGACCTGTCGCTTGCTTGTTGTAACAAGTCTTGTTCTGCCTACCCTTGCTCTAGTTCACACGCACTTCAATCCATTTTGTTGAGCTTTCATATTGTACTTCAATCCATCTGTTGTTGAACAAATTTGCACCTGTCTCAAATCCATTCTTCTTGTTTGCACACAGCAACCAAAGTTCGCTGTTCTCCGTGTATTCTGCCTAACTCCATCTTTTCCCTTCCTATCACGTGCCGCTTCAGATCTGATTTGCAGCCGCTACAGACTGTTCGAATCACGTTTGTGCTCCCTATTTCGTGAAGATCGTGCAACATTTGGTTTAGTCATTAAGGCCGGCTCATTTAAGTTTTGGTTCAACCAGTTTTGTTCGGTGTTTTCATTTTGGTTTAGTCAAGCCAATTCAGTTCACTTCAGTAAAACCAGTTTGAGTTCGGTTTGCTTCAAGTTGGTTCATTTGCAATTATGGCAAATCAAAATAATAATAATCATGATGATGATGATGATGATGATGATGATGGGTTTTTGTTCCATTTTCAAATCAATCTTTGTGGGGTTTGTTTAGATACTAGAAGTTCTTGGTTTTGTTCTTCGTGGGATTGTGTTTCTAGTCTAGAAGTTCTTGTTTTTGATCTTCATGAGTTTTTGGTTCTATCCTAGATATGTTGATTTGATTTGGACATTTTTTCACAAACTCAAGTTGTTCGTGATTTTACACCTTGGGTTTGGGGGAGTGTGGTAAAAGAAAACTAGGATTTGTGATTATTATATTTTCGTTTTATGTATTTTCCTTCAGTAGGTTTGTTTGAGGTCTATTTATTTGCCTACATAAAAGGTTATGTACTCTGAATTATTATATTCAATAATATAGTAAATTAACTGTGTAAAATGTGTCAGTGGGTGGTTTTTCTTGTAGGATGAAATGAGGTGCACATTAATTGGCTTTAACGCTTTTAAGATCATGGATTTTATGACAACTTATCATTATTGTTGTTATTAATTTTATTATTAAATGGCAAGAAAATCTAAAATTTATTTACAGGTTGTTTCTTCTTCTTATTGTTTGTTTCTTTAACAAAGTGTTTTATACAAATTTGTGCATGAATGATTTACAGCAGAGGAGTATACCCGTAATCTTCTTATAGTGTTGTCAATGGCATATGATTATTACATTTTCTATAGGACACTGTTTATTTATCTCTCTTCTACTTGTTTGTCCGGTTAAACAAATAGTATGACCTAAAAATCATTAAGGGAAGTAATAGGCTAAATAATATTGTATTAGAGACTTAAGTTTGCTCCACCGAATATTCTCAGGTTGAAAACCTTACACGCAAGGCACAACTTCAAGAAGTTGAACTAGAAAGAACAAGTAAACAGTTGAAGGAAGCAATATCAATAGCAAGTGAGGAGGCTGCAAGATGCAATGCAGCCAAAGAAGTGATCAAGTCACTAACTGCACAAGTAAGTTGATCTTTTTTTATGAGCTATTCTAATACTTCATGATTTCCATTATATGACTACATAAATGACCAAATGGGTATTATATTTGTCAAACTCAATAAATCTAAAAACATAATTGCCTACCAAACAAGATTTTATATTATGTAAATTAATCTACCTACAACAGAAATACATTATCGATGATTCTAAAACCAAGCAAGAAAAAGAAAGAGTACATGATTTGAACTCCGAAGTAATTGAATTATTAAAGTGCATCCTGGTCATGATTCCTTACATATGTTGATTTCCAGGAATGAAGGAAAAAAAACATATTTTGGTTTCCGTTTCTAATAGTCCTGAGAATAAATTTCAGGAACTGTATTTAAAAACTTTTAATTGTTAATTAAAAAACTATAAGCTCAACTTGTTTTTTCATTCTTTTTTCCATTTCTTTTTTTACTTTAGACGTTTGTGTCTTGGACATAAACTTTTCAGCTGGTTTTCCATCCATTTTTCATTTGTCATCTTTTTCAGTTCGTTTGGTGCAAGTTTAATTCATAATATGTAAGTTATTCTTGCTTGTGTTGTGTGTTATATTCCAACAAAGCATTTATCTTGATGAGCTACGTTACTCAAAATTAAAAGTATGTCTGGAACAAGTTGCTCCATTGTCTTCAGCTCTGATGCATTTCAATCTTATTCCCTTAATGTTATATGAGAATTTGATGGAAATGAATACTGAAATTTTTTTTCCATCGGATCTTGAACAGCTGAAGGAAATGGCTGAAAGGCTGCCAGTTGGAGCTGCTCGTAACATTAAATCAACTCTTGCCTCTTTCAGCTCCGGTCCACCCTTCAATAATTTGATCAACACTTTCATAGACCAATTAAGTGGTCAAGAAACATCCTTAGAGACGGACTCAAACAGTTCAAGTGTCCAGTTGCTTTCTAATGGATCAAGCACTGCAAATAACCAGTCTTCAACTCAAAGCAAATCGAGTCAATTGGATTCAGCAAAGAATGGAAATAGAATCAAAGAAACTGAATCTCGCCAAGAAGCAGAATGGGTCGAGCAAGATGAGCCTGGTGTATATATTACACTCACCTCACAACCAGGAGGTGCCAAGGATCTTAAGCGAGTTCGTTTCAGGTAAGCATGTTTTACCCAATTTTATACCCAGTTCCTATAAAATACTGCTTCAGGTGCCCATGGTGGGAGACCTACTCGTTGAAGCTCATGATAACTAAGTACTTTTTGTTCGCCCAGCTGTTCATTTCTTGGTTGTGTATACTTGCAGGTTGTTTGATAATCAAGAACAAGATTCCAAATTTATTTTTACAAATAAAAAAGATTATTATGTCCCTAACCATTTGGTTTTTTGTTTTTGAAAATTTTAAGTCTTTCTTTTCTATTTTTTACCATGGGTTTCATCTTTCAGATAAATTTTTAGCCAAATTCCAAATTTCAAAAACATATTTTTAAAATTTACTTTTTCTAGTTTTCATAACTTGACTTGATTTTTTAACATTGGTAGAAGGTGAATATAACAAAGCAAAGAAACTTAGAGGTGGAATTGGTGTTTATAGACTTAAATCATTTTGCCAACATTATCTAAATAGGTGGTCAACTAACTCTATTCAAAAGTGAAGAGCTAAATACAAAATTATTTTCAAACAAGACCTGCAGTTTGTTGGAAGAAGTATTTTTCTTTTGATAAAGTTTGCTTATGGTATCATATCTCATCATCACAAATGTGGAGTACCAATTGCAGTTTAGAGCTTGTTGATGTCATAGCAACTGGAAATTCTGTTTCAATTATCCAACTCTATGTCATTCATAATTGGGAAGTTTTTGTAATTAGCGTCTCTCAGAGGGGGTTAATCATTTCCACTGCCCTTAGGTTGTCTTTGTTTTGCCTAAAAAACAAAAATGTGGAGTATCCAGTATCAAGTATCAAGGAGCAGTAACATTATCTCTTTCTCATTTCGTCAATATTTTAAGGTCATACAAGAGGGTTAATTTTTCTAGATGTAGTAGTGACTTCAGAACACCTTGATTTTACATTTCATTTCTTATGATTTTTTTGTTCGTACGATTAATCATGCAAGCAATCGATTCCTTCATGATCTTTTCTCCATGCAAAGATTTCTCTGAATTTTAAATGACCAGTTCATGTTCGATGCAGTCGAAAGCGGTTTACAGAGAAACAAGCAGAGCACTGGTGGGCAGAGAACCGTGCACGAGTTTACGAGCGATACAATGTACGGGTGATGGACAAGTCTAGTATAGGGATTGGAAGTGAAGAGTTGACTCATTGACTTGTGCAAACAGCCACAGAAATCAAATCATTTTGTATATGAAAAACAAAAAGGTTTGTTCAATTTCCAAGCTCTACTTAACTACTGGGTCATATTGACCATTGAGATTTAGATTGGAACTATTAGAGGGAAAATTAGATGAATTTGATGATTTGTTTTTCGAATGTCGATTTCATATTTCTTTCAGGTTTAGTGTTTTTCTTTTTTTAATTTCTTTTTCCATTCTTCCCCTGTATGGCTGTGTGGGGGTTATGAGAAATGTAAATACTACTAGTTGCTGTCTATTGATAAAATCAGTTGCAGTATAAATTCTAAAAGCATCTTCCTCTCCTGCCCTCTCTTTTTCTAGTAATATTCTAAATGATTACTTACATTTATTCTTTTTTCATTCAAACATATAATTATTTGTTGAAGTTTCTTGTTTTG

mRNA sequence

ATGTCCATGAAGTGTCATCAAATGAATGGTCCGACAAATAAAGTGTCAAGTGGACTTAGAAGTGCCATGATGAGTAGGGGTAGGCCAGCTGCTCCCATTACTAAATTCATAGTATTTGGCACCAAAAAGCACTTTCCAAAGAACATTCTCTTCATGAAGAAATCTCCAAATTATCTGATTTGCAGCCGCTACAGACTGTTCGAATCACGTTTGTGCTCCCTATTTCGTGAAGATCGTGCAACATTTGGTTTAGTCATTAAGGCCGGCTCATTTAAGTTTTGGTTCAACCAGTTTTGTTCGGTGTTTTCATTTTGGTTTAGTCAAGCCAATTCAGTTCACTTCAGTAAAACCAGTTTGAGTTCGGTTGAAAACCTTACACGCAAGGCACAACTTCAAGAAGTTGAACTAGAAAGAACAAGTAAACAGTTGAAGGAAGCAATATCAATAGCAAGTGAGGAGGCTGCAAGATGCAATGCAGCCAAAGAAGTGATCAAGTCACTAACTGCACAACTGAAGGAAATGGCTGAAAGGCTGCCAGTTGGAGCTGCTCGTAACATTAAATCAACTCTTGCCTCTTTCAGCTCCGGTCCACCCTTCAATAATTTGATCAACACTTTCATAGACCAATTAAGTGGTCAAGAAACATCCTTAGAGACGGACTCAAACAGTTCAAGTGTCCAGTTGCTTTCTAATGGATCAAGCACTGCAAATAACCAGTCTTCAACTCAAAGCAAATCGAGTCAATTGGATTCAGCAAAGAATGGAAATAGAATCAAAGAAACTGAATCTCGCCAAGAAGCAGAATGGGTCGAGCAAGATGAGCCTGGTGTATATATTACACTCACCTCACAACCAGGAGGTGCCAAGGATCTTAAGCGAGTTCGTTTCAGTCGAAAGCGGTTTACAGAGAAACAAGCAGAGCACTGGTGGGCAGAGAACCGTGCACGAGTTTACGAGCGATACAATGTACGGGTGATGGACAAGTCTAGTATAGGGATTGGAAGTGAAGAGTTGACTCATTGACTTGTGCAAACAGCCACAGAAATCAAATCATTTTGTATATGAAAAACAAAAAGGTTTGTTCAATTTCCAAGCTCTACTTAACTACTGGGTCATATTGACCATTGAGATTTAGATTGGAACTATTAGAGGGAAAATTAGATGAATTTGATGATTTGTTTTTCGAATGTCGATTTCATATTTCTTTCAGGTTTAGTGTTTTTCTTTTTTTAATTTCTTTTTCCATTCTTCCCCTGTATGGCTGTGTGGGGGTTATGAGAAATGTAAATACTACTAGTTGCTGTCTATTGATAAAATCAGTTGCAGTATAAATTCTAAAAGCATCTTCCTCTCCTGCCCTCTCTTTTTCTAGTAATATTCTAAATGATTACTTACATTTATTCTTTTTTCATTCAAACATATAATTATTTGTTGAAGTTTCTTGTTTTG

Coding sequence (CDS)

ATGTCCATGAAGTGTCATCAAATGAATGGTCCGACAAATAAAGTGTCAAGTGGACTTAGAAGTGCCATGATGAGTAGGGGTAGGCCAGCTGCTCCCATTACTAAATTCATAGTATTTGGCACCAAAAAGCACTTTCCAAAGAACATTCTCTTCATGAAGAAATCTCCAAATTATCTGATTTGCAGCCGCTACAGACTGTTCGAATCACGTTTGTGCTCCCTATTTCGTGAAGATCGTGCAACATTTGGTTTAGTCATTAAGGCCGGCTCATTTAAGTTTTGGTTCAACCAGTTTTGTTCGGTGTTTTCATTTTGGTTTAGTCAAGCCAATTCAGTTCACTTCAGTAAAACCAGTTTGAGTTCGGTTGAAAACCTTACACGCAAGGCACAACTTCAAGAAGTTGAACTAGAAAGAACAAGTAAACAGTTGAAGGAAGCAATATCAATAGCAAGTGAGGAGGCTGCAAGATGCAATGCAGCCAAAGAAGTGATCAAGTCACTAACTGCACAACTGAAGGAAATGGCTGAAAGGCTGCCAGTTGGAGCTGCTCGTAACATTAAATCAACTCTTGCCTCTTTCAGCTCCGGTCCACCCTTCAATAATTTGATCAACACTTTCATAGACCAATTAAGTGGTCAAGAAACATCCTTAGAGACGGACTCAAACAGTTCAAGTGTCCAGTTGCTTTCTAATGGATCAAGCACTGCAAATAACCAGTCTTCAACTCAAAGCAAATCGAGTCAATTGGATTCAGCAAAGAATGGAAATAGAATCAAAGAAACTGAATCTCGCCAAGAAGCAGAATGGGTCGAGCAAGATGAGCCTGGTGTATATATTACACTCACCTCACAACCAGGAGGTGCCAAGGATCTTAAGCGAGTTCGTTTCAGTCGAAAGCGGTTTACAGAGAAACAAGCAGAGCACTGGTGGGCAGAGAACCGTGCACGAGTTTACGAGCGATACAATGTACGGGTGATGGACAAGTCTAGTATAGGGATTGGAAGTGAAGAGTTGACTCATTGA

Protein sequence

MSMKCHQMNGPTNKVSSGLRSAMMSRGRPAAPITKFIVFGTKKHFPKNILFMKKSPNYLICSRYRLFESRLCSLFREDRATFGLVIKAGSFKFWFNQFCSVFSFWFSQANSVHFSKTSLSSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLPVGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSTANNQSSTQSKSSQLDSAKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH

Homology

[Close]

BLAST of CsGy1G030120 vs. NCBI nr
Match: XP_004139058.2 (PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 4.5e-99
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARNIKSTLASFSSGPPFN+LINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX
Sbjct: 943  VGAARNIKSTLASFSSGPPFNHLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
            XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH
Sbjct: 1063 RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 1103

[Close]

BLAST of CsGy1G030120 vs. NCBI nr
Match: XP_008450356.1 (PREDICTED: uncharacterized protein LOC103491987 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 6.1e-96
Identity = 196/221 (88.69%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARNIKSTLASFSSGPPFN+LINTFIDQL+GQETSLETDSN SSVQLLSNGSS     
Sbjct: 943  VGAARNIKSTLASFSSGPPFNHLINTFIDQLNGQETSLETDSNGSSVQLLSNGSSTANNQ 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
                         KNG +IKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 SSTLSKSSQLDSAKNG-KIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH
Sbjct: 1063 RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 1102

[Close]

BLAST of CsGy1G030120 vs. NCBI nr
Match: XP_022148922.1 (uncharacterized protein LOC111017472 [Momordica charantia])

HSP 1 Score: 346.3 bits (887), Expect = 1.2e-91
Identity = 187/221 (84.62%), Postives = 194/221 (87.78%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQ+VELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQDVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARN+KSTLAS SSGP FN LINT +DQLSGQ TSLE DSNSSSVQLLSNGS      
Sbjct: 943  VGAARNVKSTLASLSSGPTFNYLINTSVDQLSGQATSLEKDSNSSSVQLLSNGSGTANIQ 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
                         KNGNRIKE+ESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 SSTTTKLGQLDSAKNGNRIKESESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAE WWAENRARVYERYNVRV+DKSSIGIGSE+LTH
Sbjct: 1063 RFTEKQAEQWWAENRARVYERYNVRVLDKSSIGIGSEDLTH 1103

[Close]

BLAST of CsGy1G030120 vs. NCBI nr
Match: XP_022973773.1 (PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 342.8 bits (878), Expect = 1.3e-90
Identity = 187/221 (84.62%), Postives = 192/221 (86.88%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARN+KSTLAS SSG  FN+LINT IDQLS Q TSLETDSN SSVQL SNGS      
Sbjct: 943  VGAARNMKSTLASLSSGTTFNHLINTSIDQLSAQATSLETDSNCSSVQLFSNGSGTPNNQ 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
                         KNGNRIKE+ESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 SSTQSKLSQLDSAKNGNRIKESESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAE WWAENRARVYERYNVRVMDKSSIGIG+EELTH
Sbjct: 1063 RFTEKQAEQWWAENRARVYERYNVRVMDKSSIGIGNEELTH 1103

[Close]

BLAST of CsGy1G030120 vs. NCBI nr
Match: XP_023530885.1 (PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.7 bits (875), Expect = 2.9e-90
Identity = 186/221 (84.16%), Postives = 192/221 (86.88%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERTSKQLKEAISIA+EEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTSKQLKEAISIATEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARN+KSTLAS SSG  FN+LINT IDQLS Q TSLETDSN SSVQL SNGS      
Sbjct: 943  VGAARNMKSTLASLSSGTTFNHLINTSIDQLSAQATSLETDSNCSSVQLFSNGSGTPNNQ 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
                         KNGNRIKE+ESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 SSTQSKLSQLDSAKNGNRIKESESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAE WWAENRARVYERYNVRVMDKSSIGIG+EELTH
Sbjct: 1063 RFTEKQAEQWWAENRARVYERYNVRVMDKSSIGIGNEELTH 1103

[Close]

BLAST of CsGy1G030120 vs. TAIR10
Match: AT5G19420.2 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63
Identity = 144/231 (62.34%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            S VENLTRKAQLQEVELERT+KQLKEA++IASEE+ARC AAKEVIKSLTAQLK+MAERLP
Sbjct: 917  SQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQLKDMAERLP 976

Query: 180  VGAARNIKS-TLASFSSGP----PFNNLINTFIDQLSGQETSLETDSNS-SSVQLLSNGS 239
            VG+AR +KS +L SF S P    P +N +N        +  S ETDS+S ++V + SNG+
Sbjct: 977  VGSARTVKSPSLNSFGSSPDYAAPSSNTLN--------RPNSRETDSDSLTTVPMFSNGT 1036

Query: 240  S---XXXXXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKD 299
            S                     +   R KE+E R E EWVEQDEPGVYITLT+  GGA+D
Sbjct: 1037 STPVFDSGSYRQQANHAAEAINRISTRSKESEPRNENEWVEQDEPGVYITLTALAGGARD 1096

Query: 300  LKRVRFSRKRFTEKQAEHWWAENRARVYERYNVR-VMDKSSIGIGSEELTH 341
            LKRVRFSRKRF+EKQAE WWAENR RVYE+YNVR V+DKSS+G+GSE+L H
Sbjct: 1097 LKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIVVDKSSVGVGSEDLGH 1139

[Close]

BLAST of CsGy1G030120 vs. TAIR10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 127/217 (58.53%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            S VE+LTRKAQLQEVELERT+KQLKEA++I +EE  RC AAKEVIKSLTAQLK+MAERLP
Sbjct: 879  SQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSLTAQLKDMAERLP 938

Query: 180  VGAARNIKS--TLASFSSGP----PFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGS 239
            VG+AR +KS  +L SF S P    PFN L          Q  S E++ N  +  +     
Sbjct: 939  VGSARTVKSPPSLNSFGSSPGRIDPFNIL---------NQANSQESEPNGITTPMF---- 998

Query: 240  SXXXXXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKR 299
                        XXXXXXX          +R E EWVEQDEPGVYITLT+  GGA+DLKR
Sbjct: 999  ------------XXXXXXXXXXXXXXXXXARNEKEWVEQDEPGVYITLTALAGGARDLKR 1058

Query: 300  VRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSS 331
            VRFSRKRF+E QAE WWA+NR RVYE+YNVR++DK+S
Sbjct: 1059 VRFSRKRFSEIQAEQWWADNRGRVYEQYNVRMVDKAS 1070

[Close]

BLAST of CsGy1G030120 vs. TAIR10
Match: AT1G76950.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 135.6 bits (340), Expect = 5.8e-32
Identity = 91/240 (37.92%), Postives = 135/240 (56.25%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + V++LT+K + QEVEL+ + K+ +EA+++A EE+A+  AAKE IKSL AQLK++AE+LP
Sbjct: 847  TQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLP 906

Query: 180  VGAARNI-------------------------KSTLASFSSGPPFNNLI--NTFIDQLSG 239
             G +  +                         +S  +S SS  PF+      ++ +  S 
Sbjct: 907  PGESVKLACLQNGLDQNGFHFPEENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSP 966

Query: 240  QETSLETDSNSSSVQLLSNGSSXXXXXXXXXXXXXXXXXXKNGNRIK--ETESRQEAEWV 299
            ++T   ++ NS++       SS                   NG+        ++ EAEW+
Sbjct: 967  KQTPRASERNSNAYPADPRLSSSGSVISERIEPFQFQNNSDNGSSQTGVNNTNQVEAEWI 1026

Query: 300  EQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSS 331
            EQ EPGVYITL +   G +DL+RVRFSR+RF E QAE WW+ENR +VYE+YNVRV +KS+
Sbjct: 1027 EQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKST 1086

[Close]

BLAST of CsGy1G030120 vs. TAIR10
Match: AT5G42140.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21
Identity = 46/69 (66.67%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 263  SRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYN 322
            S+ EAEW+EQ EPGVYITL +   G +DLKRVRFSR+RF E+QAE WW+ENR RVYE+YN
Sbjct: 995  SQVEAEWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKYN 1054

Query: 323  VRVMDKSSI 332
            +R  D+SS+
Sbjct: 1055 IRGTDRSSV 1063

[Close]

BLAST of CsGy1G030120 vs. TAIR10
Match: AT1G65920.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 122  VENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAER---- 181
            ++NL R+ +L   ++E   ++L +   +A EEA +  AAKE+IK+L ++L+   E+    
Sbjct: 809  IKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPSNP 868

Query: 182  LPVGAARNIKSTLASF--SSGPPFNNLINTFIDQLSG----QETSLETDSNSSSVQLLSN 241
            L  G A N       F  S   P+   I T   Q       ++   ++ +  S+++LL +
Sbjct: 869  LKTGIACNPSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVD 928

Query: 242  GSSXXXXXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDL 301
             S                   + G    ET+    AE VEQ EPGVYIT T+ P G K L
Sbjct: 929  AS---------------PAITRTGYLQNETQD-SSAEQVEQYEPGVYITFTALPCGQKTL 988

Query: 302  KRVRFSRKRFTEKQAEHWWAENRARVYERYNVRV 326
            KRVRFSRKRF+EK+A+ WW E +  VY +Y+  +
Sbjct: 989  KRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAEI 1006

[Close]

BLAST of CsGy1G030120 vs. Swiss-Prot
Match: sp|Q947D2|PRAF1_ARATH (PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRAF1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-30
Identity = 91/240 (37.92%), Postives = 135/240 (56.25%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + V++LT+K + QEVEL+ + K+ +EA+++A EE+A+  AAKE IKSL AQLK++AE+LP
Sbjct: 847  TQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLP 906

Query: 180  VGAARNI-------------------------KSTLASFSSGPPFNNLI--NTFIDQLSG 239
             G +  +                         +S  +S SS  PF+      ++ +  S 
Sbjct: 907  PGESVKLACLQNGLDQNGFHFPEENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSP 966

Query: 240  QETSLETDSNSSSVQLLSNGSSXXXXXXXXXXXXXXXXXXKNGNRIK--ETESRQEAEWV 299
            ++T   ++ NS++       SS                   NG+        ++ EAEW+
Sbjct: 967  KQTPRASERNSNAYPADPRLSSSGSVISERIEPFQFQNNSDNGSSQTGVNNTNQVEAEWI 1026

Query: 300  EQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSS 331
            EQ EPGVYITL +   G +DL+RVRFSR+RF E QAE WW+ENR +VYE+YNVRV +KS+
Sbjct: 1027 EQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSEKST 1086

[Close]

BLAST of CsGy1G030120 vs. Swiss-Prot
Match: sp|Q6YUB8|BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 263 SRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERY 322
           S QE EWVE+DEPGVYIT+ + PGG ++L+RVRFSR++F+E  A  WW ENRAR++++Y
Sbjct: 338 SDQEREWVEEDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIHDQY 396

[Close]

BLAST of CsGy1G030120 vs. Swiss-Prot
Match: sp|Q8GZ92|BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.1e-15
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 268 EWVEQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERY 322
           EWVEQDEPGVYIT+   PGG ++L+RVRFSR+RF E  A  WW ENRAR++E+Y
Sbjct: 330 EWVEQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQY 383

[Close]

BLAST of CsGy1G030120 vs. Swiss-Prot
Match: sp|Q5HZ09|BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-13
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 263 SRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERY 322
           S  E+EWVEQDEPG+YIT+ + P G ++L+RVRFSR +F E  A  WW +NRAR+ ++Y
Sbjct: 311 SDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRARIQQQY 369

[Close]

BLAST of CsGy1G030120 vs. Swiss-Prot
Match: sp|O82281|BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana OX=3702 GN=BRXL1 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 2.2e-12
Identity = 55/175 (31.43%), Postives = 81/175 (46.29%), Query Frame = 0


Query: 161 KEVIKSLTAQLKEMAERLPVGAARNIKSTLASFSSG----PPFNNLINTFIDQLSGQETS 220
           KE +KSLT Q+K+MA +   G+ +  K T  S SS     P F+    +      G  TS
Sbjct: 31  KEAVKSLTTQIKDMASKFS-GSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPYPGGSTS 90

Query: 221 LETDSNSSSVQLLSNGSSXXXXXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPG 280
                +        +G                         +++ E +   EW+ Q EPG
Sbjct: 91  STPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVLEDDEPK---EWMAQVEPG 150

Query: 281 VYITLTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNVRVMDKSSI 332
           V+IT  S P G  DLKR+RFSR+ F + QA+ WW EN  R+ E YNV+  ++ ++
Sbjct: 151 VHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNRQAL 201

[Close]

BLAST of CsGy1G030120 vs. TrEMBL
Match: tr|A0A1S3BPQ5|A0A1S3BPQ5_CUCME (uncharacterized protein LOC103491987 OS=Cucumis melo OX=3656 GN=LOC103491987 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96
Identity = 196/221 (88.69%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 942

Query: 180  VGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSSXXXXX 239
            VGAARNIKSTLASFSSGPPFN+LINTFIDQL+GQETSLETDSN SSVQLLSNGSS     
Sbjct: 943  VGAARNIKSTLASFSSGPPFNHLINTFIDQLNGQETSLETDSNGSSVQLLSNGSSTANNQ 1002

Query: 240  XXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 299
                         KNG +IKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK
Sbjct: 1003 SSTLSKSSQLDSAKNG-KIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFSRK 1062

Query: 300  RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH
Sbjct: 1063 RFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 1102

[Close]

BLAST of CsGy1G030120 vs. TrEMBL
Match: tr|A0A061GST9|A0A061GST9_THECC (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_040948 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.3e-72
Identity = 156/223 (69.96%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVELERT+KQLKEAI+IA EE A+C AAKEVIKSLTAQLK+MAERLP
Sbjct: 883  AQVENLTRKAQLQEVELERTTKQLKEAITIAEEETAKCKAAKEVIKSLTAQLKDMAERLP 942

Query: 180  VGAARNIKS-TLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGS-SXXX 239
            VGAARNIKS +  SF S P  N++ N  ID+++GQ    E DSN SS QLLSNGS +   
Sbjct: 943  VGAARNIKSPSFTSFGSSPASNDVSNVSIDRMNGQIVCQEPDSNVSSSQLLSNGSNTASN 1002

Query: 240  XXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFS 299
                           K+G RIKE ESR E EWVEQDEPGVYITLTS PGGAKDLKRVRFS
Sbjct: 1003 RSLGHNKQGHIEPATKSGGRIKEGESRNENEWVEQDEPGVYITLTSLPGGAKDLKRVRFS 1062

Query: 300  RKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RKRF+EKQAE WWAENRARVYE+YNVR++DKSS+G+GSE+L H
Sbjct: 1063 RKRFSEKQAEQWWAENRARVYEQYNVRMIDKSSVGVGSEDLGH 1105

[Close]

BLAST of CsGy1G030120 vs. TrEMBL
Match: tr|A0A1S3BNH2|A0A1S3BNH2_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 OS=Cucumis melo OX=3656 GN=LOC103491479 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.0e-71
Identity = 150/223 (67.26%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVE+ERT+KQLKEA++ A+ EA +CNAAKEVI SLTAQLKEMAERLP
Sbjct: 881  AQVENLTRKAQLQEVEMERTTKQLKEALAFAAAEATKCNAAKEVIMSLTAQLKEMAERLP 940

Query: 180  VGAARNIKS-TLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGS-SXXX 239
            VGAARNIKS TLAS  S PPFN+++   ID+ +GQ  SLE D   S+  LLSNGS +   
Sbjct: 941  VGAARNIKSPTLASLGSSPPFNDVVTPSIDRSNGQTMSLEADVIESNSHLLSNGSGTASI 1000

Query: 240  XXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFS 299
                           +NGN++KE++SR +AEWVEQDEPGVYIT TS  GGAKDLKRVRFS
Sbjct: 1001 RSSGHNRQGNSDSTTRNGNKVKESDSRHDAEWVEQDEPGVYITFTSLQGGAKDLKRVRFS 1060

Query: 300  RKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RKRFTEKQAE WWAENRARVY++YNVR +DKSS+G+GSE+L H
Sbjct: 1061 RKRFTEKQAEQWWAENRARVYDQYNVRTIDKSSVGVGSEDLAH 1103

[Close]

BLAST of CsGy1G030120 vs. TrEMBL
Match: tr|A0A0A0KEK0|A0A0A0KEK0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432780 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71
Identity = 150/223 (67.26%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + VENLTRKAQLQEVE+ERT+KQLKEA++ A+ EA +CNAAKEVI SLTAQLKEMAERLP
Sbjct: 882  AQVENLTRKAQLQEVEMERTTKQLKEALAFAAAEATKCNAAKEVIMSLTAQLKEMAERLP 941

Query: 180  VGAARNIKS-TLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGSS-XXX 239
            VGAARNIKS +LAS  S PPFN+++   ID+ +GQ  SLE D   S+  LLSNGSS    
Sbjct: 942  VGAARNIKSPSLASLGSSPPFNDVVTPSIDRSNGQTMSLEADVIESNSHLLSNGSSTASI 1001

Query: 240  XXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFS 299
                           +NGN++KE++SR +AEWVEQDEPGVYIT TS  GGAKDLKRVRFS
Sbjct: 1002 RSSGHNRPANSDSTTRNGNKVKESDSRHDAEWVEQDEPGVYITFTSLQGGAKDLKRVRFS 1061

Query: 300  RKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RKRFTEKQAE WWAENRARVY++YNVR +DKSS+G+GSE+L H
Sbjct: 1062 RKRFTEKQAEQWWAENRARVYDQYNVRTIDKSSVGVGSEDLAH 1104

[Close]

BLAST of CsGy1G030120 vs. TrEMBL
Match: tr|A0A2P5XLF1|A0A2P5XLF1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16496 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.5e-70
Identity = 151/223 (67.71%), Postives = 173/223 (77.58%), Query Frame = 0


Query: 120  SSVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTAQLKEMAERLP 179
            + V+NLTRKAQLQEVELERT+KQLKEAI+IA EE A+C AAKEVIKSLTAQLK+MAERLP
Sbjct: 864  AQVDNLTRKAQLQEVELERTTKQLKEAIAIAEEETAKCKAAKEVIKSLTAQLKDMAERLP 923

Query: 180  VGAARNIKS-TLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLLSNGS-SXXX 239
            VGA RNIKS +  SF S PP N+  +  +++ +GQ    E DSN SS QLLSNGS +   
Sbjct: 924  VGATRNIKSPSFTSFGSSPPSNDASSVSLERPNGQMVYQEPDSNVSSGQLLSNGSNTTGN 983

Query: 240  XXXXXXXXXXXXXXXKNGNRIKETESRQEAEWVEQDEPGVYITLTSQPGGAKDLKRVRFS 299
                           K+G R KE+E R E+EWVEQDEPGVYITLTS PGGAKDLKRVRFS
Sbjct: 984  RSTSHTKQGHSEPATKSGGRSKESEPRNESEWVEQDEPGVYITLTSLPGGAKDLKRVRFS 1043

Query: 300  RKRFTEKQAEHWWAENRARVYERYNVRVMDKSSIGIGSEELTH 341
            RKRF+EKQAE WWAENRARVYE+YNVR +DKSS+G+GSEEL H
Sbjct: 1044 RKRFSEKQAEQWWAENRARVYEQYNVRTIDKSSVGVGSEELAH 1086

The following BLAST results are available for this feature:

BLAST of CsGy1G030120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139058.2	4.5e-99	98.64	PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]	[more]
XP_008450356.1	6.1e-96	88.69	PREDICTED: uncharacterized protein LOC103491987 [Cucumis melo]	[more]
XP_022148922.1	1.2e-91	84.62	uncharacterized protein LOC111017472 [Momordica charantia]	[more]
XP_022973773.1	1.3e-90	84.62	PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita maxima]	[more]
XP_023530885.1	2.9e-90	84.16	PH, RCC1 and FYVE domains-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G030120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19420.2	1.3e-63	62.34	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G12350.1	1.2e-50	58.53	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT1G76950.1	5.8e-32	37.92	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G42140.1	1.2e-21	66.67	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT1G65920.1	1.9e-19	33.64	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]

BLAST of CsGy1G030120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q947D2\|PRAF1_ARATH	1.0e-30	37.92	PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q6YUB8\|BRXL1_ORYSJ	1.2e-15	61.02	Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE...	[more]
sp\|Q8GZ92\|BRXL4_ARATH	8.1e-15	66.67	Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1	[more]
sp\|Q5HZ09\|BRXL3_ARATH	2.6e-13	55.93	Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2	[more]
sp\|O82281\|BRXL1_ARATH	2.2e-12	31.43	Protein Brevis radix-like 1 OS=Arabidopsis thaliana OX=3702 GN=BRXL1 PE=2 SV=2	[more]

BLAST of CsGy1G030120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPQ5\|A0A1S3BPQ5_CUCME	4.1e-96	88.69	uncharacterized protein LOC103491987 OS=Cucumis melo OX=3656 GN=LOC103491987 PE=...	[more]
tr\|A0A061GST9\|A0A061GST9_THECC	5.3e-72	69.96	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ...	[more]
tr\|A0A1S3BNH2\|A0A1S3BNH2_CUCME	2.0e-71	67.26	LOW QUALITY PROTEIN: uncharacterized protein LOC103491479 OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0KEK0\|A0A0A0KEK0_CUCSA	2.6e-71	67.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432780 PE=4 SV=1	[more]
tr\|A0A2P5XLF1\|A0A2P5XLF1_GOSBA	8.5e-70	67.71	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16496 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027988	BRX_N
IPR013591	Brevis_radix_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G030120.1	CsGy1G030120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 122..153
None	No IPR available	PFAM	PF16627	BRX_assoc	coord: 192..260 e-value: 5.7E-14 score: 51.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..271
None	No IPR available	PANTHER	PTHR22870:SF301	SUBFAMILY NOT NAMED	coord: 121..330
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 121..330
IPR013591	Brevis radix (BRX) domain	PFAM	PF08381	BRX	coord: 266..321 e-value: 1.3E-29 score: 101.2
IPR013591	Brevis radix (BRX) domain	PROSITE	PS51514	BRX	coord: 267..322 score: 32.82
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	PFAM	PF13713	BRX_N	coord: 152..186 e-value: 2.7E-18 score: 65.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G030120	CmoCh20G001100	Cucurbita moschata (Rifu)	cgybcmoB108
CsGy1G030120	MELO3C015132.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G030120	CsaV3_1G043270	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G030120	Carg02692	Silver-seed gourd	carcgybB0905

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G030120	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G030120	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G030120	Cucurbita maxima (Rimu)	cgybcmaB116
CsGy1G030120	Cucurbita maxima (Rimu)	cgybcmaB120
CsGy1G030120	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G030120	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G030120	Cucurbita moschata (Rifu)	cgybcmoB110
CsGy1G030120	Cucurbita pepo (Zucchini)	cgybcpeB037
CsGy1G030120	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G030120	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G030120	Cucurbita pepo (Zucchini)	cgybcpeB137
CsGy1G030120	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G030120	Bottle gourd (USVL1VR-Ls)	cgyblsiB004
CsGy1G030120	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G030120	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G030120	Melon (DHL92) v3.5.1	cgybmeB064
CsGy1G030120	Melon (DHL92) v3.6.1	cgybmedB060
CsGy1G030120	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G030120	Watermelon (97103) v1	cgybwmB024
CsGy1G030120	Watermelon (97103) v1	cgybwmB073
CsGy1G030120	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G030120	Silver-seed gourd	carcgybB0433
CsGy1G030120	Silver-seed gourd	carcgybB0527
CsGy1G030120	Silver-seed gourd	carcgybB0955
CsGy1G030120	Watermelon (97103) v2	cgybwmbB029
CsGy1G030120	Watermelon (97103) v2	cgybwmbB041
CsGy1G030120	Wax gourd	cgybwgoB094