CsGy1G029490 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G029490
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 27574278 .. 27579223 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGGAGACTATAAGATTCAAAGTATTTTTCTTTCTTTCTTTTTTAAAAAAAGATTTAAGAATCAAAGTTTGGGATATGTATTTCTAAATTTGTCTTTATATATATGTGCTCTTTCAAGATGTATACACATTAATATGGTCTGAAGAAGGTTTTATTTGACTTTATTCCGTTGAATCTCAAACCACACTAAAGCCTCCATCTATCACTTTAAGTGAATAACTAACTTTAAGAAATTAATCTTTGTACTTTGATACGGATCAACACGATCTTGCCACTTGTACTACTTAGTAGTATAGGTAGTATCGATCTACATAGCATACATTTATTTGGTTGGTTATTTGTAGGCAACAGTAAGAGACTACATTAATTGGCATCGTCGTTGTTGGGGAGCGCCTAGATTTCTCTTGGAAAATAGTTTTCTACCTTTTATTATATATTCTTTTTTATTCTTCTCTTGCTTTGTATGACTCAATGCTCCTAGGATCGAAATTCACGGTTGTATTTTGTAGATCTTGGTAGGAGAAAAGGCGAAGAAAAAGAGAGGTTAGAGAGCAAAGAGCTTCTCAAGAGGATATTTGTCTACCAGCACTTTTGAAGAAGAACTTCCACAGTAAGAAGTTAAGAGCATGCCAGATCTTGTGCTGGAGCATACCTTGAGGGACCTAGTTGCACCTGACTTTACCCGTAGTACCTATGCATTACTTATTCCAAGACGACTTGTGGACTCGTTTCTAATTTAAGTATAAGAATTTAAAATTTGGTTAAGAGTTTTGAAATTTTACATTTTAGAATAGAATAGGCGTTTTGAAGGAAAATTACTAAGACACAATGAATTCAAAAGCTTATTCTATAAACCCCAACATTTTAGTGCCACAACCTAAGAAAATTTTTGGAATAGAAAGATTGAGAGCATTAGGAGCCACTGTGTTTAGTGAAACAGCTAAACCGGAAGAAGCTGAAAAATGGCTATGGACATTGGAGAATTGTTTATTGGTAAACTGATATGTGTTGGAATTTATGATTTGACGAAAAGGAATTATCAAAGGGCATTGCGAAAAAGATTTCATAAAACTTCATCAAGTCTTTTAGACTTACGTTTTTAAAATCTCATCTTCTAGAAACAGGTGTTTTGATCAAGTAGAGAAAAAAGTTGAAAGGCTTGCAGCGAGTTGAGAAAGCCACCAGGCATTTAAAAGTTGTTAATTATGTTTGGTCAAAGTGTTGTAATTGTATATTCTTACAGAAAGCCTGTTATTAATAAAGTGTACACTTAGTTAAGTTATTTATCACATTTGGCATTTAAGGTTGACTGTCATTGCGTTTTGAGTTTCATTTGATAGTATAAAAAGAGTTGAAAATAAGTTTAGTGATAAGATCAATTGCAAAGTTTAAGCTAAATCACGTCCTATCCGCACTACTTCCTGCGTTTAGGTTGTCTTGTGAATTAAGGTGTGACACAACTTGTAATGAACTTAAAACTAAGTTAATTAATTTACTGCTATTTATTATGGCTTTGCAGATGAGGACCTACACAAATCCATCAAGGAGTTCCATGTAGTGTGCAATAACATAAGACCACATGGCATGACTGGGGACCAATTGAATTTTAGGGCCTTCTCTTTAGCTTTGAAGAATGATACCAAGGATTGGCTGTATATACTCCCGGTAGGATTTATGACCACCTGGGCCCAGATAGAGAAGGTTTTTCGAGAATTTTTTTCTCTACCTCTCGCACCCACCAAGGTAAAAAAGGAGATTTATGGCATCACGTAGTAGACGAATGTCGAGTTACTGCACAAACACTAGGAGCAGTTTAAGTGCATGTGCAAAAATTTTCCTCATCACCAAATTTCTAAAGTGCTTCTAATTCAGTACTTCTATGAGAAGTTAGTCTCCAATGATAAAAGTACTATTGATATAGGTGCGAGAGGAGCCTGAGTGAATAAGACTCCAATAAAGGCCAAAACTATAATTTCCACTATGGCTACTAATGACAGCAGTTTGAAATTAGATATGGAGAGCATCTGTCCACCACTTCTTCACATGAGGTAAGTGAGCTTGGATCTGAAATTGCTAAACGAACTACTCTTAAGAAACAAGTATTCATTGCACAAGAATAACAGTCTCAGTAGTCTGTAGTTGAGGTAAACTATGTTGGAAAAAAACAAGGTGGTAGGTTGCAAAAAAAAAACTGTCGAGGAAGCAAAGGAAATAGTCACAGAGGATAAGGATATGATAATTATAGCTGTCGCCACGTGCTCAAGACGATGTGGAGCAGTTGAGTCCTCAAAATGGTTAGTTTTAAAACAAAATAAGAGTCGCTACCAATCTTTTTTATGATGTATTGAACATCGAAATAAAGTAAATCATTAAAAAAATGGTTTTCGAAAACTAGAGTGGAGTTTGGAAGTCATTTGTGTGTGAGGAATGTGTTAGCACCCCACAACACCCATTTAGAAAACGATGGTGAAATTTCAAATCTTGAATTGCAAATATTCTTTAATTTCTTTTAAAAAGCAATGTTTTATTTTACCCTTCATTACTCCAATATTTGAAGCAACGATCTCATAAAATAAGTGGAGAGCATTCCATCAATTGGACTATATTGAAGAATTTTCTCACTTCAAGAAAGTGAAAAATTCATCATAGGAATAGCCTTCTAATAAAAAGATGTTTTTTAAACATTAATTAAAATTATTTTTTTTATGATCAAATCTTCGACTACCAAAGATGTGATCCTTTAGAAGAATTTTAAAACTTTGAAAATTTTAATTAGAAAGAGTTGAAAATTTTAAATTGAAAACAAAACGAATGTTAATAGAAAAATTAGATTAGTAAAAACAAGAGTAAAGAAGCATCATAAACCAAAAGAATCGACTTCTCACCCTAAATTATACAAACAAAATAACATATTGAGATTTAATTTTTATAAAAAGGTATTGGAGATCGATCTCAGTCTCCCAAAGAATCTACTTCCCACCTTAAGAATTATAAGAATCTGGACTCTCAAATTTTCTAGATTTTGTCGTCAGATGTTTGTTTTAAAGAAAAATTAATTGAAAATATTAGAAAAAAGATTAAACAACTATAAGCAAGAATTCATTAAATGAATCATAAACCAACACACAAACATTTAAATAAGCATATATGTACAACAATCTAGAATAAACAATAATCTATAAGTAAAATAAAATATAAAACAAAATTACTAGAAAAAGAATTAGAAAGTAAGAACAAATAATGAGTAAAAATAACTAAACAAGATATAAAATAATTTACATAAACAAATAAATTTGTTATAAGAGAGAAACAAAAATGTAGAAATAAGATAACACATAAGTAATTATAAGAGAAGAAAAATGGAGAAACAAAAACAAGAAAAATAAACGAATATGAAGGAAAAATATAATATTAAATGACATATAAAATTGAGAAAATACTAAAAACACAATAATAAATGGTATGGAAAGAAAAAAAGAATTAAATATAAAATGCTAAATATAAATAAATTAAAGAGACATTTTTTAAATAGAAAAATAAATTAAAATATTTACAAGTTATAATAAAATTTGGATTATATCACTGATAGTCTTTTATCACTGGTAGTCTTTTATCTTTATAGCATATCAATGATTATCAGTGATAGAATTTGCTATAGGTTGTAAATATTTTGTAAAATCTACTATTTTTAAAAATTCTCCTAAATTAAAGATAAGCATATAAAGAACAAAGCTTAAGAATAAATTAACAAAGAAAAGAAACCATGAAAAAAAATAAAAGGATAAACAACAAAATGTAAATCAAAGATGTATAATAAAAAAATTATATATATATATATATATATAAACTCACAAGATAATAAATAAATAAATGCAAGAGAAAGAAAATAGAAAAAAGAGTAACACGATAACTAAAAACAAGATGATAGATATTAATGAAAAGGTGAAATTGAAAACACTAAACTCTCTTGTTGTTTAAAGTGTGGATCATTGAGACCTAAGTCCTACCATACACTTTTAACTAAGAGTTTTTCTTGTATAATAGATTTTTGGTATTGTAGGGAGCTTTTGTGAGAAAGATGAAGATTTAAGAGGTTCCTAGAAAATAAAATAAAATGGATGTTGTAGATATTTTTTTTTTTTTGTTTTTTTTTAAAAGAAGAGATGAAGGTTAAGAGAAGTAGGGGCTATGGAGCTTAGAGGTTTAGATGAAGAAGAAAGGATGGGAAGGTCGTAAAAAAATTTTAGGGTTTTTTTTGTGGCTTTTTCTTTTTTGTTCACCTTTCCGTGGATGAAGAAGAAGAGATTATTTATAGCCAAAAAGCTTCGCGAAATAGCTAAAAATTCAAAATTGCAAGTTTTTTTTTTTAAAAATTTGAAAATAATACCAACATTAGCATTCATCTCAAAACGGCATGAAACATTTATTAACAAATTTAAAAGAGTTACCATATTTAGTATTTCTTCACCTACCTTAGACTAACTAATTGATTTAGTTATTCTAACCAAACTATCTACATAACTTTAAAAGTAATTAAATAACAAAGCAAAGCCTTAAAGGGAAAGTCTAGCAATTGAATTAATTTTAAATAAAGTCAGACAAAATTAGGTGACTACAACAACAAAGCCTTAAAGGAAAAGAATACTATAGAACAATCATACGATCCATGCAATTCCTAAAAAGTGCGGCAGTCGCAAAATTTTGAGCAAAGATAGAGCTCAAGGAAGAATACCCACTGCCATTTTCAGTCAACAAATCCTTGAGAAAAGCTCATTCCACGGATCACCGTTGTGAAGGCATCTGCTCAAGGAAACCCATTATGCCGCCACACCTACTCAGATCTGCCACCGCTCGTCTAGATCCTCAATCTCCTTTCTGTTCGTCGGTCTCTGCGCTTTGTTTGCATAAGCATCGTTCATATCCGCTGCCAAACAGAACAACA

mRNA sequence

ATGATTGGAGACTATAAGATTCAAAAGCTCAAGGAAGAATACCCACTGCCATTTTCAGTCAACAAATCCTTGAGAAAAGCTCATTCCACGGATCACCGTTGTGAAGGCATCTGCTCAAGGAAACCCATTATGCCGCCACACCTACTCAGATCTGCCACCGCTCGTCTAGATCCTCAATCTCCTTTCTGTTCGTCGGTCTCTGCGCTTTGTTTGCATAAGCATCGTTCATATCCGCTGCCAAACAGAACAACA

Coding sequence (CDS)

ATGATTGGAGACTATAAGATTCAAAAGCTCAAGGAAGAATACCCACTGCCATTTTCAGTCAACAAATCCTTGAGAAAAGCTCATTCCACGGATCACCGTTGTGAAGGCATCTGCTCAAGGAAACCCATTATGCCGCCACACCTACTCAGATCTGCCACCGCTCGTCTAGATCCTCAATCTCCTTTCTGTTCGTCGGTCTCTGCGCTTTGTTTGCATAAGCATCGTTCATATCCGCTGCCAAACAGAACAACA

Protein sequence

MIGDYKIQKLKEEYPLPFSVNKSLRKAHSTDHRCEGICSRKPIMPPHLLRSATARLDPQSPFCSSVSALCLHKHRSYPLPNRTT
Homology
[Close]
BLAST of CsGy1G029490 vs. NCBI nr
Match: KGN66463.1 (hypothetical protein Csa_1G612870 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 44 MPPHLLRSATARLDPQSPFCSSVSALCLHKHRSYPLPNRT 84
          M  HLLRSATAR DPQSPFCS VSALCL KHR YPL NRT
Sbjct: 1  MSSHLLRSATARPDPQSPFCSLVSALCLRKHRLYPLLNRT 40

[Close]
BLAST of CsGy1G029490 vs. TrEMBL
Match: tr|A0A0A0LXG5|A0A0A0LXG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G612870 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-08
Identity = 33/40 (82.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 44 MPPHLLRSATARLDPQSPFCSSVSALCLHKHRSYPLPNRT 84
          M  HLLRSATAR DPQSPFCS VSALCL KHR YPL NRT
Sbjct: 1  MSSHLLRSATARPDPQSPFCSLVSALCLRKHRLYPLLNRT 40

The following BLAST results are available for this feature:
BLAST of CsGy1G029490 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66463.11.6e-0882.50hypothetical protein Csa_1G612870 [Cucumis sativus][more]
BLAST of CsGy1G029490 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G029490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G029490 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LXG5|A0A0A0LXG5_CUCSA1.0e-0882.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G612870 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G029490.1CsGy1G029490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G029490Csa1G612870Cucumber (Chinese Long) v2cgybcuB002
CsGy1G029490CsaV3_1G042550Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G029490Cucumber (Gy14) v2cgybcgybB042
CsGy1G029490Cucurbita maxima (Rimu)cgybcmaB013
CsGy1G029490Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G029490Cucurbita maxima (Rimu)cgybcmaB144
CsGy1G029490Cucurbita moschata (Rifu)cgybcmoB013
CsGy1G029490Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G029490Cucurbita moschata (Rifu)cgybcmoB110
CsGy1G029490Cucurbita moschata (Rifu)cgybcmoB135
CsGy1G029490Cucurbita pepo (Zucchini)cgybcpeB038
CsGy1G029490Cucurbita pepo (Zucchini)cgybcpeB039
CsGy1G029490Cucurbita pepo (Zucchini)cgybcpeB125
CsGy1G029490Cucurbita pepo (Zucchini)cgybcpeB137
CsGy1G029490Cucumber (Chinese Long) v2cgybcuB049
CsGy1G029490Bottle gourd (USVL1VR-Ls)cgyblsiB037
CsGy1G029490Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G029490Melon (DHL92) v3.5.1cgybmeB037
CsGy1G029490Melon (DHL92) v3.5.1cgybmeB038
CsGy1G029490Melon (DHL92) v3.6.1cgybmedB032
CsGy1G029490Melon (DHL92) v3.6.1cgybmedB060
CsGy1G029490Watermelon (Charleston Gray)cgybwcgB043
CsGy1G029490Watermelon (97103) v1cgybwmB022
CsGy1G029490Wild cucumber (PI 183967)cgybcpiB002
CsGy1G029490Wild cucumber (PI 183967)cgybcpiB047
CsGy1G029490Silver-seed gourdcarcgybB0186
CsGy1G029490Silver-seed gourdcarcgybB0475
CsGy1G029490Silver-seed gourdcarcgybB0527
CsGy1G029490Silver-seed gourdcarcgybB0905
CsGy1G029490Cucumber (Chinese Long) v3cgybcucB054
CsGy1G029490Watermelon (97103) v2cgybwmbB029
CsGy1G029490Watermelon (97103) v2cgybwmbB041
CsGy1G029490Wax gourdcgybwgoB071
CsGy1G029490Wax gourdcgybwgoB081
CsGy1G029490Wax gourdcgybwgoB094