CsGy1G025650 (gene) Cucumber (Gy14) v2

NameCsGy1G025650
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionArginine/serine-rich splicing factor, putative
LocationChr1 : 24497426 .. 24502482 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATCCCCAGCTTCCATTTAACATTATAAAAGGCCGATTTCGCTATGCGCTATTGAATTTTCCAGAAACTCAGAGTTCTTCAAGAATCATCTCTTCTGTTTTTTTCTTCTTTCTTGCCCTTATAATAATCAGGTACCCATTTCTCTGTTTTGAATTTTCATTTCTTTTTGGAATTTTTGTTCTTTGATTCTTGATAGAAGAAAGAAGAAAATTAGAAAAGAAGAAAGAAGAAGAAGATCTCGTCATCTTTGTATGTTGATTTTCTTTTTCATTACAATTTTGTCTTAATTTTGATAGCCATGGTGATGATTGATGACTATGATCATGGCTCAATAGGTTATTCTTCTTCATCCCTTTTTAAATCTGTATATTGTTCTTTTTCTATCTTTGTGATGCGATTTTTGTAACATTTGTTCTTATCTTTTTCAAGATTTTGTATTTGTTGTTCACATCAAAGGAGAATATGAGCAGCAGAAACAGTCGTACCATCTATGTTGGGAATCTTCCTGGTGACATTCGTCTGAGAGAAGTAGAAGATCTGTTCTACAAGGTTTGAAATTTTAGTTCTTGATAATTTTAAACTTCTTGTTGTTGTCTTGAGATGAGTAATTCTAGTATAATTGCAGTATGGACCCATTGTTGATATTGATTTGAAGATTCCACCACGACCACCGGGCTATGCTTTTGTTGAGGTGAGATTTAAATTTTGGAATATTTGGAACCCTGTTTCTAATTCTACGACCCTCAAATTGTGTTTTAGAGTTTTGGGTATTCAAAGAAGCTAAGTAGTTGCACTGAGCTGTTAGTGGTCCTTATGGAAAAACTCTTTGCTTTTCAGTTTGAAGATGTTCGTGATGCTGAAGATGCCATTTATGGCCGAGATGGGTATAAGTTTGATGGATGTCGATTGCGGGTACTAGTTGCTACGCGGGCTTGCTGATATTACTTGCCTGTGATGTCTTGTCCACATATCTGAATATAATTTTGAAATGCTTGCTTTGTAGGTGGAATTTGCACATGGTGGAAGGGGACATTCTTCTTCTGTGGATCGTTACAGTCGTAGTGGAAGTAGTCGTGGTGGTGTTCCTCGCCGAACTGACTATCGGGGTGTGTATTTTATCACTTTTTTATTTTGTGAAAGTCCGATTATAGTTTTGTGATGATATTTTGTTGTGCAGTTTTGGTTACTGGATTACCTTCTTCTGCTTCATGGCAAGACCTGAAGGTAAGCACGCTATTTCTGTTTCTGAAAATGGCATGCTACTGTAGTAAGTTGTCTATTTCTTTTCTCGATCATAGCATCTTTGTCGATTAGAGAGAACGGATTAGAGAGAACGAATTAGTGTATGGCTCCACCCTTTCTATTAATTGAGAGTTTGCTATGTGAATTTGATAATATTCAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAGGTTTTCCGTGATCGTGGTGGTATGCCTTATTAACTTATTTCTCTTTCTATTTGCTCTTACATCTGTCTCTGTGCAAGTGTCATTTAAACACATGTTTTTTTTTTTCAATATATTTGAAATGTATGTGCATGTTTGGACTTTGGACAGCTTCATTGCAGATTGATATTAGTATTGCAGTATTAACCTCCGTATTATTTTTTTCTATGAAAAAAATATCCTTGTTTTTAGATTACCTTCTTGCCACTATTTAGATTACCTTCTTGCCACATTCTATTTCATAAAGAATGTGAATTAATGAACACAGTAGGCTGGTTGAAAAGGTTCTTTAAGACATGTTAGAGATGAGGTTGATAGGTCTGAAATCCCCAACTTGAACAAGTACCTGGGGTAAGACAAATAGATTCTTCATGTCTTGGTCAACAAGACCTTTCATAGAGCTCTCTGAATACATAACTCTAGTCCCAAATCTCCATGGTGAAGTCCAAATTGGCCATTGCACCAAGTTGTTTATGCCCTGTCATGTTTTTTCTTTATTTATTTTTTAGTTCTACCTTGTGGTTGATATTGTATACATTTGAGTGTTTTCAGTCTCACGCTTGTTTCAGTTTTGTGTATATTTTCTTCATTTCTTGTATTCTATAAATCATGCTTAGTGGTGCTGAAAACCATTTTTTAAAGAATAATTTTTATGTAAATCTGTGCAGGGATGGCAGGAATAGTTGATTATACAAACTATGATGACATGAAATATGCTGTAAGTTGCACTTTAGATGGCTCGACTCTCGATGTTTTTCTGGAAGATTTGGTTCATGTTTAATATTGACAGTCTCTGACTCTGTTTTGGACTTTGTGTTCCTGCGATAATTTATTTTAATTATGTTTATAATTTTTTATCTGGCTGCAGATTAGAAAACTTGATGATTCTGAATTTCGGAATGCCTTTTCTCGAGCATATGTACGGGTACGTTGTCCGGAGTATGTGGACTGGAAGTTGTTTATATATTCTACTAAATTCTATTTTGTTGTCATTATTTTTTCAAATAAAAATGTGTACCTATTCACTCAGGTGAAGGAATATGACTCTAGACACAGCTACTCCAGGAGTCCATCTCTTGATTCTAGACGAAGTGATTATTCTAGAAGTCCTAGTCGTAGTCCATACAGGGGAAGAGGCCGGAGTCAGAGCCGAAGCAGAAGTCGAAGCCGTAGCCGTAGCCGTAGTTATAGCGGCAGGAGCACTAGGTATGTTTTAGTATTCTTGCAAAATAAAGACTTATATGTCGAATCATGAAGACTAGTATGATGTGACAATTTGTTTTGCAGTCTATCTCCAAGGCACAAGCACTCTCGTCGATCACGATCGGTTTCTGAACAATCCCTATCAAGGTTTGCTTTCATCCCACACACACATCATTCAATTTTCCATTCCAAGAACAGTGTCTGAATTTTCGTTGCTGTTGTTTTGGTGCTATTCATTTTAAACGACGTCGATTTTTTAACCGTCCCTATCAAAGTTTGCACACATTGATCAAGATGTGGGGAGAACGTGATTTTTGTATCTCTTCAATATGAATATTGTGTTGAATGCTCACTAATGTATTACATTGTGCACACCGAGTTCCTTTTCTTTTATGCGTTCACATCTTTTCTCCATGTTAAGAAAAAAGATACAAGGGACTTTTTGACTACCTTATCTGTTTCTTCTTGAGACCACACAATATCTATTTCTTGGCTTTTCATCTTTTGAAATGTTCTGACATTCAGATTTTGGAAATGAGAAGTGTTATGAAGTGTATCTATGTAAGTGTGCGTACTTGGTTTTTCTTTCTTCTTTCTTTGAACATAAAATGAGAATAGTTGCTGTATGCTTTTTGTTCTCTCTTTTTATGTAAAAGCAGGAAAGAAATAAGAACTACTAAAAGGCAACTGATTCAGCTCTAAAGCTTTTCTAGACATACATGGTTTAGTTGAATCTGCTGGTAGACATTGGCTTTTATGCAAAGAATGTTGAATTTTGTTTTGGTTTTCAAGCATTCTAAAAGGACAAACGTATTAACCTTCTTGAGAATCCCTTAGCGAGACTTCAACCATGCACTTGTATAATTGTCATGATTCACTTAGCAATTGTTTTCTTATGATGTCGCTCCAATAAACAAACACTGTTCAACTTCACTCCGGAAGTGGTGGAAGAAAGCATAAAAAACAAACAAGAAAGCATAAAAAACAAACAAGTATTTTTTTTTTCCTTTGGATATGCTCGGGCCTCCAGTTAACAAAATAGAGGTTTGTCAGTTTGGGAAGTCATCATTGTTTGTTTATGTTTTGCTAGATATGGGCTTTTGCGGAATAGTTGGGACTTCATGTTAGGGACTTGAGGGATGTGGTGCTCAATGTGCTTCTTTCAACTCTTTGGTTGTTGAGGTAATACAGTTTCGTTGATGAGCACCCTGTCAACCTCGACGCTGATATTCTTTTCCCTTTTTCATGATTTCCCAATTGTTGCTAACGCTTGTGGAAAAGCCTGTTTAGTAGTACTCTTGTTCGGCCAGTTGATAATTACTTATCTAAAACTTTCAGACACATCAATTCTACGTTACTTTGAATGTTCTTCGTCTTTGCTCTCACCCTGGTCTGCTACTGACTGTTTATTCGCTTGAACTCTATTCTTCTATTCACCTGTTTGATATGACTGAAGACTGAGTTGAGATTAGAAACTGGTCTTCGATGTGGTGTTATTGTTGAATGTGGATTTTATCATTTTGACTTCAGCTGCAGACCCAGACTTTGCTTATGGGTACTTTAAGTCCCTTGTTTCCTGTTTTCAGGTCTAGGTCAAGGTCACGATCGAGATCAAGATCACGGTCACGATCACCAGTTTCATCTGTGAGTAGAAAATTGAATATATTATCCCCCCCTCCCCTTCCTCTGGTTTTCCTTCTCTCATGTTTCTCATTGTCTCATTGATTGCAGCGTCATCGTGCAAGCAGACCTCGAAGTCGGAGCAGATCTCGGTCCAAGTCTAGATCCCTTTCACCGAATGTAATATCCTGATAGACTTTGCATGTTCCTCAAAACATGAATAACGTATGGCTTCTGTTAGTTTCTACGAGGAAGTAATATTGACCGAGTTTTGACATAAGCAGGTGAGATCCGATCGAAGCCGAAGCCAATCTGTTGATTCCAGGGACCAATATTCAGAATAGGACATTGCTGTGAGGCTGCTCTCAGATGGAACAGTAAAAGCGTAGGAGAAAAGTAGGGAATGGTATATTTGGAGGGTTCACTTTTAATGTAAAATGTGTTATGGATGACCTTTATTAACCCAAGCCATGTTGCTGCATTGTATGTCGACACATGCTTCGGTTATTTCACTTTTAACGTTCTCTGTTCTTCCACCTTCGAGTATATTTCGTTACTATTACATATTCTCTGATGACTAGTTTTTGTTTCATGTATTTTTCTTTAAAGCAGTTATCAAGTCTTACATTATCAAATATAAAATAGTCTCATTGCCAATGATAAATTAATAGCACTGTTTGTCTTGTCAATGTTCTAATTTGATATGATGTGTGTTGTGTTATTTGTCATTTTTAGTACTTTCCAACGAAGTTGATT

mRNA sequence

CCATCCCCAGCTTCCATTTAACATTATAAAAGGCCGATTTCGCTATGCGCTATTGAATTTTCCAGAAACTCAGAGTTCTTCAAGAATCATCTCTTCTGTTTTTTTCTTCTTTCTTGCCCTTATAATAATCAGCCATGGTGATGATTGATGACTATGATCATGGCTCAATAGATTTTGTATTTGTTGTTCACATCAAAGGAGAATATGAGCAGCAGAAACAGTCGTACCATCTATGTTGGGAATCTTCCTGGTGACATTCGTCTGAGAGAAGTAGAAGATCTGTTCTACAAGTATGGACCCATTGTTGATATTGATTTGAAGATTCCACCACGACCACCGGGCTATGCTTTTGTTGAGTTTGAAGATGTTCGTGATGCTGAAGATGCCATTTATGGCCGAGATGGGTATAAGTTTGATGGATGTCGATTGCGGGTGGAATTTGCACATGGTGGAAGGGGACATTCTTCTTCTGTGGATCGTTACAGTCGTAGTGGAAGTAGTCGTGGTGGTGTTCCTCGCCGAACTGACTATCGGGTTTTGGTTACTGGATTACCTTCTTCTGCTTCATGGCAAGACCTGAAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAGGTTTTCCGTGATCGTGGTGGGATGGCAGGAATAGTTGATTATACAAACTATGATGACATGAAATATGCTATTAGAAAACTTGATGATTCTGAATTTCGGAATGCCTTTTCTCGAGCATATGTACGGGTGAAGGAATATGACTCTAGACACAGCTACTCCAGGAGTCCATCTCTTGATTCTAGACGAAGTGATTATTCTAGAAGTCCTAGTCGTAGTCCATACAGGGGAAGAGGCCGGAGTCAGAGCCGAAGCAGAAGTCGAAGCCGTAGCCGTAGCCGTAGTTATAGCGGCAGGAGCACTAGTCTATCTCCAAGGCACAAGCACTCTCGTCGATCACGATCGGTTTCTGAACAATCCCTATCAAGGGACTTGAGGGATGTGGTGCTCAATGTGCTTCTTTCAACTCTTTGGTTGTTGAGGTCTAGGTCAAGGTCACGATCGAGATCAAGATCACGGTCACGATCACCAGTTTCATCTCGTCATCGTGCAAGCAGACCTCGAAGTCGGAGCAGATCTCGGTCCAAGTCTAGATCCCTTTCACCGAATGTGAGATCCGATCGAAGCCGAAGCCAATCTGTTGATTCCAGGGACCAATATTCAGAATAGGACATTGCTGTGAGGCTGCTCTCAGATGGAACAGTAAAAGCGTAGGAGAAAAGTAGGGAATGGTATATTTGGAGGGTTCACTTTTAATGTAAAATGTGTTATGGATGACCTTTATTAACCCAAGCCATGTTGCTGCATTGTATGTCGACACATGCTTCGGTTATTTCACTTTTAACGTTCTCTGTTCTTCCACCTTCGAGTATATTTCGTTACTATTACATATTCTCTGATGACTAGTTTTTGTTTCATGTATTTTTCTTTAAAGCAGTTATCAAGTCTTACATTATCAAATATAAAATAGTCTCATTGCCAATGATAAATTAATAGCACTGTTTGTCTTGTCAATGTTCTAATTTGATATGATGTGTGTTGTGTTATTTGTCATTTTTAGTACTTTCCAACGAAGTTGATT

Coding sequence (CDS)

ATGAGCAGCAGAAACAGTCGTACCATCTATGTTGGGAATCTTCCTGGTGACATTCGTCTGAGAGAAGTAGAAGATCTGTTCTACAAGTATGGACCCATTGTTGATATTGATTTGAAGATTCCACCACGACCACCGGGCTATGCTTTTGTTGAGTTTGAAGATGTTCGTGATGCTGAAGATGCCATTTATGGCCGAGATGGGTATAAGTTTGATGGATGTCGATTGCGGGTGGAATTTGCACATGGTGGAAGGGGACATTCTTCTTCTGTGGATCGTTACAGTCGTAGTGGAAGTAGTCGTGGTGGTGTTCCTCGCCGAACTGACTATCGGGTTTTGGTTACTGGATTACCTTCTTCTGCTTCATGGCAAGACCTGAAGGATCACATGCGTCGTGCTGGTGATGTCTGCTTCTCTGAGGTTTTCCGTGATCGTGGTGGGATGGCAGGAATAGTTGATTATACAAACTATGATGACATGAAATATGCTATTAGAAAACTTGATGATTCTGAATTTCGGAATGCCTTTTCTCGAGCATATGTACGGGTGAAGGAATATGACTCTAGACACAGCTACTCCAGGAGTCCATCTCTTGATTCTAGACGAAGTGATTATTCTAGAAGTCCTAGTCGTAGTCCATACAGGGGAAGAGGCCGGAGTCAGAGCCGAAGCAGAAGTCGAAGCCGTAGCCGTAGCCGTAGTTATAGCGGCAGGAGCACTAGTCTATCTCCAAGGCACAAGCACTCTCGTCGATCACGATCGGTTTCTGAACAATCCCTATCAAGGGACTTGAGGGATGTGGTGCTCAATGTGCTTCTTTCAACTCTTTGGTTGTTGAGGTCTAGGTCAAGGTCACGATCGAGATCAAGATCACGGTCACGATCACCAGTTTCATCTCGTCATCGTGCAAGCAGACCTCGAAGTCGGAGCAGATCTCGGTCCAAGTCTAGATCCCTTTCACCGAATGTGAGATCCGATCGAAGCCGAAGCCAATCTGTTGATTCCAGGGACCAATATTCAGAATAG

Protein sequence

MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSRSYSGRSTSLSPRHKHSRRSRSVSEQSLSRDLRDVVLNVLLSTLWLLRSRSRSRSRSRSRSRSPVSSRHRASRPRSRSRSRSKSRSLSPNVRSDRSRSQSVDSRDQYSE
BLAST of CsGy1G025650 vs. NCBI nr
Match: XP_011659887.1 (PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis sativus] >XP_011659888.1 PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis sativus] >KGN66056.1 hypothetical protein Csa_1G569330 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 207
           RVKEYDSRHSYSRSPSLDSRRSDYSR
Sbjct: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 206

BLAST of CsGy1G025650 vs. NCBI nr
Match: XP_008450613.1 (PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo] >XP_008450614.1 PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo] >XP_008450615.1 PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo] >XP_008450617.1 PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo] >XP_008450618.1 PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 207
           RVKEYDSRHSYSRSPSLDSRRSDYSR
Sbjct: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 206

BLAST of CsGy1G025650 vs. NCBI nr
Match: XP_022969758.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766.1 serine/arginine-rich splicing factor SR30-like [Cucurbita maxima])

HSP 1 Score: 409.5 bits (1051), Expect = 1.2e-110
Identity = 200/206 (97.09%), Postives = 201/206 (97.57%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSS+D YSRSGSSRGGV RRTDYRVLVTGLP SA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 207
           RVKEYDSR SYSRSPS DSRRSDYSR
Sbjct: 181 RVKEYDSRRSYSRSPSRDSRRSDYSR 206

BLAST of CsGy1G025650 vs. NCBI nr
Match: XP_023530260.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_023530261.1 serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 6.5e-106
Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGR-GHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSS 120
           AIYGRDGYKFDGCRLRVEFAHGGR GHSSS+D YSRSGSSRGGV RRTDYRVLVTGLP S
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120

Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
           ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180

Query: 181 VRVKEYDSRHSYSRSPSLDSRR 202
           VRVKEYDSR SYSRSPS DSR+
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRQ 202

BLAST of CsGy1G025650 vs. NCBI nr
Match: XP_022928780.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_022928787.1 serine/arginine-rich splicing factor SR30-like [Cucurbita moschata])

HSP 1 Score: 392.9 bits (1008), Expect = 1.1e-105
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED+RDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSS+D YSRSGSSRGGV RRTDYRVLVTGLP SA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPS 197
           RVKEYDSR SYSRSPS
Sbjct: 181 RVKEYDSRRSYSRSPS 196

BLAST of CsGy1G025650 vs. TAIR10
Match: AT1G09140.1 (SERINE-ARGININE PROTEIN 30)

HSP 1 Score: 321.6 bits (823), Expect = 5.7e-88
Identity = 160/195 (82.05%), Postives = 172/195 (88.21%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR +RTIYVGNLPGDIR  EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGY FDGCRLRVE AHGGR  S SVDRYS S S+     RR+DYRVLVTGLP SA
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180

Query: 181 RVKEYDSRHSYSRSP 196
           RV+EY+SR S SRSP
Sbjct: 181 RVREYESR-SVSRSP 194

BLAST of CsGy1G025650 vs. TAIR10
Match: AT1G02840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-73
Identity = 134/198 (67.68%), Postives = 152/198 (76.77%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSV----------DRYSRSGSSRGGVPRRTDYR 120
           AI+GRDGY FDG RLRVE AHGGR  S                             +++R
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFXXXXXXXXXXXXXXXXXXXXXXSEFR 120

Query: 121 VLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSE 180
           VLVTGLPSSASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180

Query: 181 FRNAFSRAYVRVKEYDSR 189
           FRNAFS  YVRV+EYDSR
Sbjct: 181 FRNAFSNGYVRVREYDSR 198

BLAST of CsGy1G025650 vs. TAIR10
Match: AT4G02430.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 273.1 bits (697), Expect = 2.3e-73
Identity = 142/200 (71.00%), Postives = 156/200 (78.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRTIYVGNLPGDIR REVEDLF KYGP+V IDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSG------------SSRGGVPRRTD 120
           AIYGRDGY FDG  LRVE AHGGR  SS   R S SG                   RR++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRXXXXXXXXXXXXXXXXXSRRSE 120

Query: 121 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDD 180
           YRV+V+GLPSSASWQDLKDHMR+ G+VCFS+VFRD  G  GIVDYT+Y+DMKYA   LDD
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDD 180

Query: 181 SEFRNAFSRAYVRVKEYDSR 189
           +EFRNAFS  YVRV+EYDSR
Sbjct: 181 TEFRNAFSHEYVRVREYDSR 196

BLAST of CsGy1G025650 vs. TAIR10
Match: AT3G49430.1 (SER/ARG-rich protein 34A)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-70
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MS R SR+IYVGNLPGDIR  E+ED+FYKYG IVDI+LK+PPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGH-------------SSSVDRYSRSGSSRGGVPRRT 120
           AI GRDGY  DGCRLRVE AHGGRG                           R GV R +
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXRFGVSRHS 120

Query: 121 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
           ++RV+V GLPSSASWQDLKDHMR+AGDVCF+EV RD  G  G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRAYVRVKEYDS 188
           D+EFRN ++R ++RVK+Y+S
Sbjct: 181 DTEFRNPWARGFIRVKKYES 200

BLAST of CsGy1G025650 vs. TAIR10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-13
Identity = 43/96 (44.79%), Postives = 53/96 (55.21%), Query Frame = 0

Query: 9   IYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGY 68
           +YVG L    R R++E LF +YG + D+D+K       YAFVEF D RDA+DA Y  DG 
Sbjct: 13  LYVGRLSSRTRTRDLERLFSRYGRVRDVDMK-----RDYAFVEFSDPRDADDARYYLDGR 72

Query: 69  KFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVP 105
            FDG R+ VE + G         R SR   SRG  P
Sbjct: 73  DFDGSRITVEASRG-------APRGSRDNGSRGPPP 96

BLAST of CsGy1G025650 vs. Swiss-Prot
Match: sp|Q9XFR5|SR30_ARATH (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-86
Identity = 160/195 (82.05%), Postives = 172/195 (88.21%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR +RTIYVGNLPGDIR  EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGY FDGCRLRVE AHGGR  S SVDRYS S S+     RR+DYRVLVTGLP SA
Sbjct: 61  AIYGRDGYDFDGCRLRVEIAHGGRRFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY+
Sbjct: 121 SWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAYI 180

Query: 181 RVKEYDSRHSYSRSP 196
           RV+EY+SR S SRSP
Sbjct: 181 RVREYESR-SVSRSP 194

BLAST of CsGy1G025650 vs. Swiss-Prot
Match: sp|O22315|SR34_ARATH (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.2e-72
Identity = 134/198 (67.68%), Postives = 152/198 (76.77%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGDIR REVEDLF KYGP+V IDLK+PPRPPGYAFVEF+D RDAED
Sbjct: 1   MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSV----------DRYSRSGSSRGGVPRRTDYR 120
           AI+GRDGY FDG RLRVE AHGGR  S                             +++R
Sbjct: 61  AIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFXXXXXXXXXXXXXXXXXXXXXXSEFR 120

Query: 121 VLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSE 180
           VLVTGLPSSASWQDLKDHMR+ GDVCFS+V+RD  G  G+VDYT Y+DMKYA++KLDD+E
Sbjct: 121 VLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTE 180

Query: 181 FRNAFSRAYVRVKEYDSR 189
           FRNAFS  YVRV+EYDSR
Sbjct: 181 FRNAFSNGYVRVREYDSR 198

BLAST of CsGy1G025650 vs. Swiss-Prot
Match: sp|F4JHI7|SR34B_ARATH (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-72
Identity = 142/200 (71.00%), Postives = 156/200 (78.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRTIYVGNLPGDIR REVEDLF KYGP+V IDLKIPPRPPGYAFVEFED RDA+D
Sbjct: 1   MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSG------------SSRGGVPRRTD 120
           AIYGRDGY FDG  LRVE AHGGR  SS   R S SG                   RR++
Sbjct: 61  AIYGRDGYDFDGHHLRVELAHGGR-RSSHDARGSYSGRXXXXXXXXXXXXXXXXXSRRSE 120

Query: 121 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDD 180
           YRV+V+GLPSSASWQDLKDHMR+ G+VCFS+VFRD  G  GIVDYT+Y+DMKYA   LDD
Sbjct: 121 YRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDD 180

Query: 181 SEFRNAFSRAYVRVKEYDSR 189
           +EFRNAFS  YVRV+EYDSR
Sbjct: 181 TEFRNAFSHEYVRVREYDSR 196

BLAST of CsGy1G025650 vs. Swiss-Prot
Match: sp|A2RVS6|SR34A_ARATH (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.6e-69
Identity = 130/200 (65.00%), Postives = 149/200 (74.50%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MS R SR+IYVGNLPGDIR  E+ED+FYKYG IVDI+LK+PPRPP Y FVEFE  RDAED
Sbjct: 1   MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGH-------------SSSVDRYSRSGSSRGGVPRRT 120
           AI GRDGY  DGCRLRVE AHGGRG                           R GV R +
Sbjct: 61  AIKGRDGYNLDGCRLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXRFGVSRHS 120

Query: 121 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
           ++RV+V GLPSSASWQDLKDHMR+AGDVCF+EV RD  G  G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180

Query: 181 DSEFRNAFSRAYVRVKEYDS 188
           D+EFRN ++R ++RVK+Y+S
Sbjct: 181 DTEFRNPWARGFIRVKKYES 200

BLAST of CsGy1G025650 vs. Swiss-Prot
Match: sp|Q6NYA0|SRS1B_DANRE (Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.7e-49
Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 0

Query: 2   SSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDA 61
           +  N   IYVGNLP DIR ++VED+FYKYG I DIDLK     P +AFVEFED RDAEDA
Sbjct: 10  AGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDA 69

Query: 62  IYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRG--GVP-RRTDYRVLVTGLPS 121
           +YGRDGY +DG RLRVEF   GR               RG  G P RR++YRV+V+GLP 
Sbjct: 70  VYGRDGYDYDGYRLRVEFPRSGRXXXXXXXXXXXXXXPRGRYGPPSRRSEYRVIVSGLPP 129

Query: 122 SASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFR-NAFSR 181
           S SWQDLKDHMR AGDVC+++VFRD     G+V++   +DM YA+RKLD+++FR +    
Sbjct: 130 SGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHEGET 189

Query: 182 AYVRVKEYDSRH-SYSR 194
           AY+RVK    R  SY R
Sbjct: 190 AYIRVKVDGPRSPSYGR 203

BLAST of CsGy1G025650 vs. TrEMBL
Match: tr|A0A1S3BPM4|A0A1S3BPM4_CUCME (serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC103492152 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 207
           RVKEYDSRHSYSRSPSLDSRRSDYSR
Sbjct: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 206

BLAST of CsGy1G025650 vs. TrEMBL
Match: tr|A0A0A0M1I3|A0A0A0M1I3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569330 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
Sbjct: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA
Sbjct: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
Sbjct: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180

Query: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 207
           RVKEYDSRHSYSRSPSLDSRRSDYSR
Sbjct: 181 RVKEYDSRHSYSRSPSLDSRRSDYSR 206

BLAST of CsGy1G025650 vs. TrEMBL
Match: tr|A0A2K3PEH4|A0A2K3PEH4_TRIPR (Pre-mRNA-splicing factor sf2-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g010359 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 173/200 (86.50%), Postives = 186/200 (93.00%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MS R+SRTIYVGNLPGDIR+REVEDLFYK+GPIVDI+LK+PPRPPGYAFVEFED RDAED
Sbjct: 3   MSRRSSRTIYVGNLPGDIRVREVEDLFYKFGPIVDIELKVPPRPPGYAFVEFEDARDAED 62

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA 120
           AI  RDGYKFDG RLRVEFAHGGRG+SS VDRYS SGSSR GV + ++YRVLVTGLPSSA
Sbjct: 63  AIRYRDGYKFDGLRLRVEFAHGGRGYSSPVDRYSGSGSSR-GVSKHSEYRVLVTGLPSSA 122

Query: 121 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 180
           SWQDLKDHMRRAGDVCFS+VFRDRGGM GIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY+
Sbjct: 123 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYI 182

Query: 181 RVKEYDSRHSYSRSPSLDSR 201
           RV+EYD R SYSRSPS D+R
Sbjct: 183 RVREYD-RRSYSRSPSCDTR 200

BLAST of CsGy1G025650 vs. TrEMBL
Match: tr|B9I7H7|B9I7H7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G015500v3 PE=4 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 9.3e-93
Identity = 171/199 (85.93%), Postives = 179/199 (89.95%), Query Frame = 0

Query: 3   SRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAI 62
           SR SRT+YVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFE+ RDAEDAI
Sbjct: 2   SRASRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAI 61

Query: 63  YGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRG--GVPRRTDYRVLVTGLPSSA 122
            GRDGY FDGCRLRVE AHGGR HSS VD YS    S G  G  +R+DYRVLVTGLPSSA
Sbjct: 62  RGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDYRVLVTGLPSSA 121

Query: 123 SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV 182
           SWQDLKDHMRRAGDVCFS+VFRDRGGM GIVDYTNYDDMKYAI+KLDDSEFRNAFSRAY+
Sbjct: 122 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYI 181

Query: 183 RVKEYDSRHSYSRSPSLDS 200
           RV+EYDSR SYSRSPSL S
Sbjct: 182 RVREYDSRRSYSRSPSLSS 200

BLAST of CsGy1G025650 vs. TrEMBL
Match: tr|V4T5I8|V4T5I8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002007mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 174/198 (87.88%), Postives = 182/198 (91.92%), Query Frame = 0

Query: 1   MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
           MSSR+SRT+YVGNLPGD R+REVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFED RDAED
Sbjct: 1   MSSRSSRTLYVGNLPGDTRMREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDYRDAED 60

Query: 61  AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYS--RSGSSRGGVPRRTDYRVLVTGLPS 120
           AI GRDGY FDG RLRVE AHGGR HSSSVDRYS   SG SR GV RR+DYRVLVTGLPS
Sbjct: 61  AIRGRDGYNFDGYRLRVELAHGGRRHSSSVDRYSSYSSGGSR-GVSRRSDYRVLVTGLPS 120

Query: 121 SASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 180
           SASWQDLKDHMRRAGDVCFS+VFRDRGGM GIVDYT+YDDMKYAIRKLD SEFRNAFSR+
Sbjct: 121 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRS 180

Query: 181 YVRVKEYDSRHSYSRSPS 197
           YVRV+EYDSR SYSRSPS
Sbjct: 181 YVRVREYDSRRSYSRSPS 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659887.11.7e-114100.00PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis sativus] >XP_01165... [more]
XP_008450613.11.7e-114100.00PREDICTED: serine/arginine-rich splicing factor SR30 [Cucumis melo] >XP_00845061... [more]
XP_022969758.11.2e-11097.09serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766.... [more]
XP_023530260.16.5e-10696.04serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_... [more]
XP_022928780.11.1e-10596.94serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_02292878... [more]
Match NameE-valueIdentityDescription
AT1G09140.15.7e-8882.05SERINE-ARGININE PROTEIN 30[more]
AT1G02840.11.8e-7367.68RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G02430.22.3e-7371.00RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G49430.11.4e-7065.00SER/ARG-rich protein 34A[more]
AT3G53500.26.0e-1344.79RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
Match NameE-valueIdentityDescription
sp|Q9XFR5|SR30_ARATH1.0e-8682.05Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3... [more]
sp|O22315|SR34_ARATH3.2e-7267.68Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3... [more]
sp|F4JHI7|SR34B_ARATH4.2e-7271.00Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
sp|A2RVS6|SR34A_ARATH2.6e-6965.00Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
sp|Q6NYA0|SRS1B_DANRE1.7e-4955.33Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=7955 GN=srsf1b PE=2 SV... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BPM4|A0A1S3BPM4_CUCME1.1e-114100.00serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC10349215... [more]
tr|A0A0A0M1I3|A0A0A0M1I3_CUCSA1.1e-114100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569330 PE=4 SV=1[more]
tr|A0A2K3PEH4|A0A2K3PEH4_TRIPR3.2e-9386.50Pre-mRNA-splicing factor sf2-like protein (Fragment) OS=Trifolium pratense OX=57... [more]
tr|B9I7H7|B9I7H7_POPTR9.3e-9385.93Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G015500v3 PE=... [more]
tr|V4T5I8|V4T5I8_9ROSI2.1e-9287.88Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002007mg PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006376 mRNA splice site selection
biological_process GO:0008150 biological_process
cellular_component GO:0035061 interchromatin granule
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025650.1CsGy1G025650.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 110..181
e-value: 3.7E-6
score: 36.4
coord: 8..78
e-value: 7.5E-22
score: 88.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..76
e-value: 7.4E-18
score: 64.0
coord: 111..173
e-value: 2.8E-9
score: 36.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 109..187
score: 9.644
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..82
score: 17.506
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 1..92
e-value: 2.8E-25
score: 90.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 108..186
e-value: 3.3E-21
score: 77.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..313
NoneNo IPR availablePANTHERPTHR43933:SF7SERINE/ARGININE-RICH SPLICING FACTOR SR30coord: 3..219
NoneNo IPR availablePANTHERPTHR43933FAMILY NOT NAMEDcoord: 3..219
NoneNo IPR availableCDDcd12599RRM1_SF2_plant_likecoord: 8..78
e-value: 2.27599E-43
score: 144.91
NoneNo IPR availableCDDcd12602RRM2_SF2_plant_likecoord: 109..184
e-value: 5.70299E-43
score: 144.186
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 5..176

The following gene(s) are paralogous to this gene:

None