CsGy1G025200 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G025200
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Glycine-rich protein family
Location	Chr1 : 24154852 .. 24156011 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTCTTCTTGGTTAATTTTCCTCACTCTCTCCCTTTCAGTCCAATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGGTCATCTCCATGTCATTCGGGAACTCAAACCCGATACAGTTTTCCCCTTTTATTTTTCGTTTTCTTAATCGAAAGTTTGCATGGTATTGGTTTTTTATTTGAAGAAGAAGATGGTTTTAAGTAATTCTCATGATATGATCTATTTGTGTGGTGTTTTCTGAATTGTGACAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTGTGAGTTTTTCTTATCCCTTTTAATTATTTTTCTTAAGATGATGAGTTGCATAATGTTTTGTTTATTATTTTTATAAGCTTTTATTGTTTTTAATAGATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGTAGGCCATACGTTGTTGGCCAGCTACGTACCTTATGTTAACTTACAGAATGTGTATTATTGCTAATTTATATAAAAAAAAGAATTGTTATGTAAATAGTTTAGAATGATATAATTTGTAACACATGATCATCTTATTTGCCATTTGTTGTTTAATTGATTTAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAACAATATCTTGATACTAATATACATAAAAAAGAACACTACATTTATTGACATCATAACATTACTCTATTTGAGACTCTCAATATGTACTCTTCTCTCTTTGTAAATTTACACTTCACTCTTCTTTCTTCAAAGGCAAAGAAACGCAGCCAAACCCATTTCTCTCCATTTTGTTTGTTTCTCTTTGCTTGTGAG

mRNA sequence

CTTCTTTCTTCTTGGTTAATTTTCCTCACTCTCTCCCTTTCAGTCCAATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAACAATATCTTGATACTAATATACATAAAAAAGAACACTACATTTATTGACATCATAACATTACTCTATTTGAGACTCTCAATATGTACTCTTCTCTCTTTGTAAATTTACACTTCACTCTTCTTTCTTCAAAGGCAAAGAAACGCAGCCAAACCCATTTCTCTCCATTTTGTTTGTTTCTCTTTGCTTGTGAG

Coding sequence (CDS)

ATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAA

Protein sequence

MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL

Homology

[Close]

BLAST of CsGy1G025200 vs. NCBI nr
Match: KGN66014.1 (hypothetical protein Csa_1G561940 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 4.8e-83
Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVY-------SDDQEIPGQMVVEGFKCFDNKFIYNGCES 60
           MASPISFLPIALALAVLLRCPS +         D EIPGQMVVEGFKCFDNKFIYNGCE 
Sbjct: 1   MASPISFLPIALALAVLLRCPSGHLHVIRELKPDTEIPGQMVVEGFKCFDNKFIYNGCER 60

Query: 61  AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV 120
           AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV
Sbjct: 61  AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV 120

Query: 121 GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 163
           GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL
Sbjct: 121 GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 169

[Close]

BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_004135766.2 (PREDICTED: uncharacterized protein LOC101204762 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPS 60
           MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCE AYRLNPS
Sbjct: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCERAYRLNPS 60

Query: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120
           GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ
Sbjct: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120

Query: 121 RGNFNQGLFMQGEFSEAHTFQKWF 145
           RGNFNQGLFMQGEFSEAHTFQK +
Sbjct: 121 RGNFNQGLFMQGEFSEAHTFQKCY 144

[Close]

BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_008450550.1 (PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 3.7e-75
Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPS 60
           MASPISFLP+ LAL V LRCPSV + DQEI GQMVVE FKCFDNKFIYNGCESAYRLNPS
Sbjct: 1   MASPISFLPVVLALVVSLRCPSV-NGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPS 60

Query: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120
           GSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F NFLFYNKATAQSVRNALR+GCS+SSQ
Sbjct: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQ 120

Query: 121 RGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 163
           RGNFNQGLFMQGE S+AHTFQ+WF LHYS L LVG CCFLIL
Sbjct: 121 RGNFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVG-CCFLIL 160

[Close]

BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_022158829.1 (uncharacterized protein LOC111025289 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59
Identity = 117/161 (72.67%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPS 60
           MA P +FLPI LALAV L  PSV +  +EIPGQ+V E  +CFDNKFIYNGC+S YRLNPS
Sbjct: 1   MAFP-TFLPILLALAVSLPTPSVCA--EEIPGQVVTEALRCFDNKFIYNGCDSGYRLNPS 60

Query: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120
           GSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F NFLFYNKA AQ+VRNALR GCSYSSQ
Sbjct: 61  GSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKAMAQNVRNALRAGCSYSSQ 120

Query: 121 RGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLI 162
           RGNFN GLFMQGE S+AH+FQKW  L Y ++ LVGCC F++
Sbjct: 121 RGNFNPGLFMQGEISKAHSFQKW--LTYCIILLVGCCFFIL 156

[Close]

BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_022989485.1 (uncharacterized protein LOC111486529 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53
Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPS 60
           MASP+  L +    A+ L C SV    +E  GQ V +GF+CFDN  IYNGCESAYRLNPS
Sbjct: 1   MASPLPVLLLLPLAALALYCSSVCG--EEFEGQGVTQGFQCFDNNLIYNGCESAYRLNPS 60

Query: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120
           G+ NVP +ATNLFCNGPCLIETQLLLNCLD+ F NFLFYNKAT  +V+NALR GCSYS+Q
Sbjct: 61  GNLNVPLQATNLFCNGPCLIETQLLLNCLDHAFDNFLFYNKATVLAVQNALRAGCSYSTQ 120

Query: 121 RGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFL 161
           RGNFN G FMQGE S+ HT QKW  L+Y +LFL+GCC  L
Sbjct: 121 RGNFNPGYFMQGEISKGHTLQKWVTLYY-VLFLIGCCFIL 157

[Close]

BLAST of CsGy1G025200 vs. TAIR10
Match: AT1G56320.1 (BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2))

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28
Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 32  GQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDN 91
           G +V     CF+N  +Y GC  A+RLN  G F VPPE T+ FCNGPC  ET+L+L C+++
Sbjct: 37  GILVQRAAFCFNNNLLYRGCNEAFRLNQQGEFKVPPEETDRFCNGPCSAETELVLTCINS 96

Query: 92  TFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFNQGLFMQG 133
              +F+FYN+AT + VRNALR GCS S  RGNFN G + QG
Sbjct: 97  VMSDFVFYNRATPRDVRNALRGGCSSSFTRGNFNVGDYAQG 137

[Close]

BLAST of CsGy1G025200 vs. TAIR10
Match: AT5G49350.1 (Glycine-rich protein family)

HSP 1 Score: 95.1 bits (235), Expect = 4.2e-20
Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 31  PGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLD 90
           P ++V +  +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++
Sbjct: 177 PPEIVAKALECLNEKHIYRECDESWRLTLNGDLNIPLGRTEEFCEGPCFSETHLALNCIE 236

Query: 91  NTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFN 126
               ++ F+N+AT   +R  L+ GCSY  +RG FN
Sbjct: 237 EIIHHYRFFNRATIHDIRETLKSGCSYGPERGVFN 271

[Close]

BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A0A0LYD5|A0A0A0LYD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561940 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.2e-83
Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVY-------SDDQEIPGQMVVEGFKCFDNKFIYNGCES 60
           MASPISFLPIALALAVLLRCPS +         D EIPGQMVVEGFKCFDNKFIYNGCE 
Sbjct: 1   MASPISFLPIALALAVLLRCPSGHLHVIRELKPDTEIPGQMVVEGFKCFDNKFIYNGCER 60

Query: 61  AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV 120
           AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV
Sbjct: 61  AYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRV 120

Query: 121 GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 163
           GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL
Sbjct: 121 GCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 169

[Close]

BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A1S3BPH6|A0A1S3BPH6_CUCME (uncharacterized protein LOC103492117 OS=Cucumis melo OX=3656 GN=LOC103492117 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75
Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPS 60
           MASPISFLP+ LAL V LRCPSV + DQEI GQMVVE FKCFDNKFIYNGCESAYRLNPS
Sbjct: 1   MASPISFLPVVLALVVSLRCPSV-NGDQEISGQMVVESFKCFDNKFIYNGCESAYRLNPS 60

Query: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQ 120
           GSFNVPPEATNLFCNGPCLIETQLLLNCLDN+F NFLFYNKATAQSVRNALR+GCS+SSQ
Sbjct: 61  GSFNVPPEATNLFCNGPCLIETQLLLNCLDNSFHNFLFYNKATAQSVRNALRIGCSFSSQ 120

Query: 121 RGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL 163
           RGNFNQGLFMQGE S+AHTFQ+WF LHYS L LVG CCFLIL
Sbjct: 121 RGNFNQGLFMQGELSKAHTFQEWFFLHYSFLLLVG-CCFLIL 160

[Close]

BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A2I4EMS4|A0A2I4EMS4_9ROSI (uncharacterized protein LOC108991012 OS=Juglans regia OX=51240 GN=LOC108991012 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.0e-36
Identity = 79/143 (55.24%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 20  CPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCL 79
           C S Y+ D   PGQ V     CF+NK IY GC  AYRLNPSG+ +VPP A +LFCNGPCL
Sbjct: 3   CSSGYAQDN--PGQEVANALMCFNNKLIYIGCNEAYRLNPSGNIDVPPVAADLFCNGPCL 62

Query: 80  IETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFNQGLFMQGEFSEAHT 139
            ETQ +LNC+D  F N +F+NKAT  SVR AL  GCSY+SQRGNFN G +++G  S AH 
Sbjct: 63  AETQEVLNCIDELFSNIMFHNKATIPSVRYALNAGCSYTSQRGNFNVGQYIEGVTSNAHR 122

Query: 140 FQKWFILHYSLLFLVGCCCFLIL 163
                  H  +L +V  CCF IL
Sbjct: 123 LPNSISFHTFMLIIV--CCFSIL 141

[Close]

BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|G7I9G7|G7I9G7_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11412322 PE=4 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-34
Identity = 72/132 (54.55%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 6   SFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNV 65
           + L  AL    +  C SV ++ +   GQ +V+   CF+NK IY GC+ AYRLNPSG+  V
Sbjct: 10  NLLITALIFIAIFFCYSVAAEGELDGGQDIVKALSCFENKLIYAGCDDAYRLNPSGNIRV 69

Query: 66  PPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFN 125
           PPEAT+ FC+GPCLIETQL+L C+DN   NF+FYNKAT Q +R AL  GCSYS QRGNFN
Sbjct: 70  PPEATDFFCSGPCLIETQLVLECIDNMLSNFIFYNKATVQQMRYALNSGCSYSRQRGNFN 129

Query: 126 QGLFMQGEFSEA 138
              ++ GE + A
Sbjct: 130 LEGYIGGETNNA 141

[Close]

BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|K7LJG9|K7LJG9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_10G147900 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-34
Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 10  IALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEA 69
           I + L++ L C    + + ++ GQ +++   CFDNK IY GC+ AYRLNPSG+ N+PP A
Sbjct: 24  ILVILSISLFCFYSEAAEGDLQGQNMLKALSCFDNKLIYVGCDEAYRLNPSGNINIPPVA 83

Query: 70  TNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFNQGLF 129
           T+ FC+GPCL ETQL+LNC+DN   NF+FYNKAT Q +R AL  GCSYS QRGNFN   +
Sbjct: 84  TDFFCSGPCLTETQLVLNCIDNILSNFIFYNKATLQQMRYALNAGCSYSRQRGNFNLAEY 143

Query: 130 MQGEFSEA 138
           + GE + A
Sbjct: 144 IGGETNNA 151

The following BLAST results are available for this feature:

BLAST of CsGy1G025200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66014.1	4.8e-83	92.31	hypothetical protein Csa_1G561940 [Cucumis sativus]	[more]
XP_004135766.2	2.0e-76	97.92	PREDICTED: uncharacterized protein LOC101204762 [Cucumis sativus]	[more]
XP_008450550.1	3.7e-75	87.65	PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]	[more]
XP_022158829.1	1.7e-59	72.67	uncharacterized protein LOC111025289 [Momordica charantia]	[more]
XP_022989485.1	3.1e-53	66.88	uncharacterized protein LOC111486529 [Cucurbita maxima]	[more]

BLAST of CsGy1G025200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56320.1	2.4e-28	53.47	BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT...	[more]
AT5G49350.1	4.2e-20	40.00	Glycine-rich protein family	[more]

BLAST of CsGy1G025200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G025200 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYD5\|A0A0A0LYD5_CUCSA	3.2e-83	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561940 PE=4 SV=1	[more]
tr\|A0A1S3BPH6\|A0A1S3BPH6_CUCME	2.5e-75	87.65	uncharacterized protein LOC103492117 OS=Cucumis melo OX=3656 GN=LOC103492117 PE=...	[more]
tr\|A0A2I4EMS4\|A0A2I4EMS4_9ROSI	5.0e-36	55.24	uncharacterized protein LOC108991012 OS=Juglans regia OX=51240 GN=LOC108991012 P...	[more]
tr\|G7I9G7\|G7I9G7_MEDTR	2.7e-34	54.55	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11412322 PE=4 SV=2	[more]
tr\|K7LJG9\|K7LJG9_SOYBN	3.6e-34	53.91	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_10G147900 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G025200.1	CsGy1G025200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34366:SF3	SUBFAMILY NOT NAMED	coord: 22..146
None	No IPR available	PANTHER	PTHR34366	FAMILY NOT NAMED	coord: 22..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G025200	Cla005163	Watermelon (97103) v1	cgybwmB026
CsGy1G025200	Csa1G561940	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G025200	ClCG03G017700	Watermelon (Charleston Gray)	cgybwcgB047
CsGy1G025200	CSPI01G25900	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G025200	Cp4.1LG04g08600	Cucurbita pepo (Zucchini)	cgybcpeB120
CsGy1G025200	MELO3C029286.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G025200	CsaV3_1G038300	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G025200	Cla97C03G068070	Watermelon (97103) v2	cgybwmbB044

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G025200	Cucumber (Gy14) v2	cgybcgybB012
CsGy1G025200	Cucurbita maxima (Rimu)	cgybcmaB012
CsGy1G025200	Cucurbita maxima (Rimu)	cgybcmaB016
CsGy1G025200	Cucurbita moschata (Rifu)	cgybcmoB019
CsGy1G025200	Cucurbita moschata (Rifu)	cgybcmoB036
CsGy1G025200	Cucurbita moschata (Rifu)	cgybcmoB128
CsGy1G025200	Cucurbita pepo (Zucchini)	cgybcpeB028
CsGy1G025200	Cucurbita pepo (Zucchini)	cgybcpeB043
CsGy1G025200	Bottle gourd (USVL1VR-Ls)	cgyblsiB012
CsGy1G025200	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G025200	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G025200	Watermelon (Charleston Gray)	cgybwcgB029
CsGy1G025200	Watermelon (97103) v1	cgybwmB068
CsGy1G025200	Cucumber (Chinese Long) v3	cgybcucB022
CsGy1G025200	Wax gourd	cgybwgoB098