CsGy1G024260 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G024260
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 23122476 .. 23127098 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAACATGAATTTGACACACCCCCTAGTTTCAAACCCATGGCCGGAAACTCCCTTTAAACCATCCTATCTTTTCCTTTCTAAACCCTATTCACCGTTCAGCAAAACCCCTCCCGTCCCTTTAGCTGCCACTGCCGCCCCGATGAACTCGCTGCCGCGCCCTCCCTTTCACACTCCCTCGTCTCTCCAAGAAATCAGAATTACTTATCGTCGTTGTTCTTTTTTTTCTTTCTCAGAAACAAAAAAAAGTGGTTCAGCCCTTAAACCGCGCCGTTGGTGAGATCGCGCTGACACTCACTTGCACTGCCGCTCATTTTCAGCTATCGAAGATTTTGATTTTATGGTTTTGTTTCATTGAGTTACAGAGAAGAACTTGCACAAGATTTCAAACCACAAACTGATTTAATTTCTTCCGTGTATGTCTGATTTGAAATACTTCCAAATTCAGGGGTTCCAAGCGGGAGTTAACTTTTCTGCTCTCTCTAGCTTCGATCACCATTGTATATTTTTCTCATGTTGCGTTGGAACACAAGAAAGTTGAACTTTTTTGGCAATGATATGGAGATATGGCTGTAATATCTTCCAAATAGCATCTCGTCAAATCATCAGAACATTTGCCCATCAGTCATATCGTCGATGTACAACCCCACATATAAATTTAACCAAAATCCTCCACAACCGACTAGACGAAGACATTGAACAGAAATTTTCTGAGAACAGGCAAGTGATTCTCACTAATGATCTCGTGTACACCACTCTGTTGAATTGTTCTTCTGATTTAATCGCTTTGAGCTTTTTCATGTGGTGTGCTAAACAGCCCAATTTCTTCCACAACCCTGCGGCGTTTGATTATATGGTGGGTGTGGTTTCCCGTCTCATGAAACAATATGAAACTGTGAATGGGATTCTTGGGGGGTTGGAGAGTGTTGGAAATGTGACTAAGGCACAAACGTTTCTGCTTCTTTTGAGGATTTATTGGCGTGGAGGAATGTACGATTTGGTTTTTGAAGCATTTGACCATATGGATCGCTATGGATTTACACCAAACACATTTGCACGTAATGTGATTATGGATGTGTTGTTCAAGGTTGGACGTGCTGATGTTGCTTTGAAGGTCTTTAAAGAGACACTGCTACCAAATTTTTTGACATTCAACATTGTATTGTGTAATTTATCCAAAACAAAGGATTTGATAGGTATTGGAGATACTTTTAGATGTATGTTGAGAATGGGGTATTGTCCTAATCCTGGGACATTTGAAGTGGTTTTGAATGGTTTATGCAAATTAGGTAGGCTGGCAGAAGCATATCAAGTATGGGGTATTATGACAACTTTTGGAATATCCATGTCCGTAAACATTTGGACTATAATGATCGATGGATTCTGTAGATTGCGCAGAACCGAAGAAGCTTCTTCTTTGGTGAAAAAGATGAAAAAATCTGGTTGTTCTCCAAACATTGTGACATATACTACCTTGATTAAGGGATATATATATGCACAACGGATTAGTGACGCATTTGATGTTTTAAGTATTATTGAATCAGAAGGGCCTTCGCCTGACCTGATTCTTTATAACGTATTGATTGATAGCCTTGCTAAAAATGAGAGGTACAATGATGCTCTCAGTATTTTTCTTAGTTTGCATAAACGAAACATACTTCCTGACTGTTATACTTTCAGTTCGTTGTTGAATACCATATGTTTATCCAAAAGGCTTTTTCTTCTACCCAAGTTGGTTGATGGATTTTTAGTTGAAGTTGACTTGGTGGCATGTAACTCTCTGCTTAGTTATCTTGGTAAGGCTGGGTTTGCTGCACTTGCCTTAGAACTATATAATAACATGGTGAATGGAGGTTTAATGCCAGATAAGTATAGTGTTCTTGGAGTACTGACTGGTCTTTGTGAATCAAGGAGAATCGGTGAAGCAGTTCGTCTGTACAATGGCATTCTCTTGAACTATACAGGAGTTGATGCTCACATCCACACTGTAATTATAGATGGACTTATAAAAGCTGGTAAATTTCATTCAGCCATTAGGATATTCAGAAGAAATTTATTGGAGGAAAATTCTTTAGATGTTGTATCATATTCTGTTGCCATTCGTGGGCTTCTTCTGGTCGGTAGAAATACAGAGGCTTCTAACTTGTATAACTACATGAAGGAGGCTGGAATAAATCCAAACGGGCATGTTTGCAACGTAATGCTCTCCACTTTTTGTAAAGAAAAAAAATTTGCATTAGTGAAGCAGATGCTGCAAGAGATGATTGACCTGGGAATAAAAATGAGCAGGAATAATTTCTTTAGGTTATACAATGCCATTTGTAGATCATCAAATGGTTCTCATCTGGTTATCTACTTATTAATTGAGATGAAAGTTTTGGGATTATTACCTAGGAAACGAGATTGTGAAACATTGGTTCATAATCCCCCCAAAGATGTGAATATTTCTGAAAAACATTATAAATTACTGAATGGCTGTCTAGAATACTGTCTATGTGGTGATACATCTAGCTCCGAAGAATATACTGATGTGGCTGCTTTTGTGGGCTGAGTTTGTATGTGGAAGAAAGTCAATTTTCAGAATGATGGTTCAGCTGCTATTTTCGGCAATCTAGAATGTATTCGAACATATCTCAAGCAATATAAAGGTACAGCAGCTGAAAGCTTCATCCTTGTGGAACATTTTGTATTTTGACTTTCCCTTACTGCTCTGGATTTCTGATCTTTATGCAATAATTAATGCACCTGAAACAATGCCGTTCCTTGTTCCCTTTTTCTTTGACAGTAAGATGTTAAAGTAGTTCTCCATGCTATATTTTGACTTTCTTATGAACATCTATCATGCTTTTGAAATAATAAAATTGGTTTCATTAAGTGAGCTCAGGCGCTGTAACAATTGATTTATAACAAATGATTTGAATCTCTTCAAATTTTTAGTACCAGATATAACATACTGAGTTCCTATTTCTTTGCTTTCTACTTTGAATTAGAAGTTATTGTTTTTAGCCATTTTAATCAATGAGACCTGTATCTGGATTTCATACCTTTTTCTGAAGAGAAGAAAATTATTTAGAAATGGCATATGCTTATGGTTTTAGATGATTTGTTTATTGGTTAATTTTAGTTTAGTTTTTAATTAGTAGTTTGAAGTTAATTAGCTATTCCTTATTTTGAAAGACTTGAAATAGCTAATCGTGGGAATTGTAAAGCGGCTTTCTGAATCATATGTAAAACTAGAACTTTGTTCTAGAGAGTTCTTTCGCAACTAGAAGGGTGAGTTTCCCTTTTCTGGTCATGAATTCCTAATTGAATAATCCCCAAAGTTGTTGCATCACTTTCTTTGAAATGTTCGAACTTGACTCATGGTGCACTGGATGCCTTTTCACATACGGTATGGTAATGTTACTGAGTTATATAACTTATAAGTTTGTTGATGGGATTTCTAGATCTACCTTGATCGAATTTGAGATGCAGTTTTATTTGAATTTGGCACTTGAAAATTATGTAATTTCTGGTTCAATATTTTTGTATAGGAAGGGGCTTTCTCAACCCTATATTCTCCGTATAACAGTCTGGAATTCCATGGAATTGAAAGCTATATCCAACTGCAGATTGGGTACGAGGCTTTTGCAGCTGGTCATTTTTGCGCCTTCATGATATTTAAACGGATCACATTATTGGTATAAGGTTTGTCTTTCTTTCTTAAAATTATTTCAGGAAGTGATATCTTATTTTTTCACCGTCCTTTATTTTCCACTGACCATCAAACAATCCTTCTCACTCAGTTTGGTGGAGTAGCTGCTCCTTCTCAATGGCGAAAGCTTAAGAGAAACAATAGTCTTCAACAACCAAGATAGTTTCTTTGTGGGGGCAATTTAATCTGTGTGCTGTACTTGCATTGAGATAAAAACCTCGAACTTTGCAGCAGAAAACGATGAGCCCAAGTGATGTCAATGCTCGAATATATTTCCCAATTCCCTTCTTGGTATGATTGTCTATTCTAGTGTAGATGAAGTTCAGCTATTTGATTTTTTTTTTGTTGAAAAGAGATGAAGTTTTGATTCCAGAGTAGAATGATGAAGTTCTAGAAGAATCCAAACATTTCACTCTTCAAACTGCGGTTTGTTGTACAATATAATTGATGAGGAGCAAAATCATATTCACACATATTGTATGTCTAACGAGATTCTATGTGAAGTTCGTGAAACTGTCACAATTTTGTTCGTTTCCTGGTGTGGTTCTCCGCAAGCATTTGAATGTCTTCTCCAATATTTGGTGACTCATAGCTTCTAAAGGAAGCCTATTGATAGGAAGGAACTTGTAGACTTCAAAGAAATTAAAGCTATGATTGGATATATTGAAAGTAGAGATGTAGAACAAACACAAATTTATGTGAAAACCCTAGTCCAGGAAAGAAAAACTACAATGTTGATCTTTCTTATTATTTTCTTATGATAATAAAGGTACAAAGGGGAAAATATTTATAGACAACATGAGTCTAATTAAAATAATAAAAAATTAGAGCAAAGTAAATCTCAACCACCCTTAGGCTTTCAATATGACCCAAACTTGCTATTTCTAACACTCCCTCAAGTAGGGATGTAAATGTTGGAAAGACCCCATT

mRNA sequence

CCAAACATGAATTTGACACACCCCCTAGTTTCAAACCCATGGCCGGAAACTCCCTTTAAACCATCCTATCTTTTCCTTTCTAAACCCTATTCACCGTTCAGCAAAACCCCTCCCGTCCCTTTAGCTGCCACTGCCGCCCCGATGAACTCGCTGCCGCGCCCTCCCTTTCACACTCCCTCGTCTCTCCAAGAAATCAGAATTACTTATCGTCGTTGTTCTTTTTTTTCTTTCTCAGAAACAAAAAAAAGTGGTTCAGCCCTTAAACCGCGCCGTTGGTGAGATCGCGCTGACACTCACTTGCACTGCCGCTCATTTTCAGCTATCGAAGATTTTGATTTTATGGTTTTGTTTCATTGAGTTACAGAGAAGAACTTGCACAAGATTTCAAACCACAAACTGATTTAATTTCTTCCGTGTATGTCTGATTTGAAATACTTCCAAATTCAGGGGTTCCAAGCGGGAGTTAACTTTTCTGCTCTCTCTAGCTTCGATCACCATTGTATATTTTTCTCATGTTGCGTTGGAACACAAGAAAGTTGAACTTTTTTGGCAATGATATGGAGATATGGCTGTAATATCTTCCAAATAGCATCTCGTCAAATCATCAGAACATTTGCCCATCAGTCATATCGTCGATGTACAACCCCACATATAAATTTAACCAAAATCCTCCACAACCGACTAGACGAAGACATTGAACAGAAATTTTCTGAGAACAGGCAAGTGATTCTCACTAATGATCTCGTGTACACCACTCTGTTGAATTGTTCTTCTGATTTAATCGCTTTGAGCTTTTTCATGTGGTGTGCTAAACAGCCCAATTTCTTCCACAACCCTGCGGCGTTTGATTATATGGTGGGTGTGGTTTCCCGTCTCATGAAACAATATGAAACTGTGAATGGGATTCTTGGGGGGTTGGAGAGTGTTGGAAATGTGACTAAGGCACAAACGTTTCTGCTTCTTTTGAGGATTTATTGGCGTGGAGGAATGTACGATTTGGTTTTTGAAGCATTTGACCATATGGATCGCTATGGATTTACACCAAACACATTTGCACGTAATGTGATTATGGATGTGTTGTTCAAGGTTGGACGTGCTGATGTTGCTTTGAAGGTCTTTAAAGAGACACTGCTACCAAATTTTTTGACATTCAACATTGTATTGTGTAATTTATCCAAAACAAAGGATTTGATAGGTATTGGAGATACTTTTAGATGTATGTTGAGAATGGGGTATTGTCCTAATCCTGGGACATTTGAAGTGGTTTTGAATGGTTTATGCAAATTAGGTAGGCTGGCAGAAGCATATCAAGTATGGGGTATTATGACAACTTTTGGAATATCCATGTCCGTAAACATTTGGACTATAATGATCGATGGATTCTGTAGATTGCGCAGAACCGAAGAAGCTTCTTCTTTGGTGAAAAAGATGAAAAAATCTGGTTGTTCTCCAAACATTGTGACATATACTACCTTGATTAAGGGATATATATATGCACAACGGATTAGTGACGCATTTGATGTTTTAAGTATTATTGAATCAGAAGGGCCTTCGCCTGACCTGATTCTTTATAACGTATTGATTGATAGCCTTGCTAAAAATGAGAGGTACAATGATGCTCTCAGTATTTTTCTTAGTTTGCATAAACGAAACATACTTCCTGACTGTTATACTTTCAGTTCGTTGTTGAATACCATATGTTTATCCAAAAGGCTTTTTCTTCTACCCAAGTTGGTTGATGGATTTTTAGTTGAAGTTGACTTGGTGGCATGTAACTCTCTGCTTAGTTATCTTGGTAAGGCTGGGTTTGCTGCACTTGCCTTAGAACTATATAATAACATGGTGAATGGAGGTTTAATGCCAGATAAGTATAGTGTTCTTGGAGTACTGACTGGTCTTTGTGAATCAAGGAGAATCGGTGAAGCAGTTCGTCTGTACAATGGCATTCTCTTGAACTATACAGGAGTTGATGCTCACATCCACACTGTAATTATAGATGGACTTATAAAAGCTGGTAAATTTCATTCAGCCATTAGGATATTCAGAAGAAATTTATTGGAGGAAAATTCTTTAGATGTTGTATCATATTCTGTTGCCATTCGTGGGCTTCTTCTGGTCGGTAGAAATACAGAGGCTTCTAACTTGTATAACTACATGAAGGAGGCTGGAATAAATCCAAACGGGCATGTTTGCAACGTAATGCTCTCCACTTTTTGTAAAGAAAAAAAATTTGCATTAGTGAAGCAGATGCTGCAAGAGATGATTGACCTGGGAATAAAAATGAGCAGGAATAATTTCTTTAGGTTATACAATGCCATTTGTAGATCATCAAATGGTTCTCATCTGGTTATCTACTTATTAATTGAGATGAAAGTTTTGGGATTATTACCTAGGAAACGAGATTGTGAAACATTGGTTCATAATCCCCCCAAAGATGTGAATATTTCTGAAAAACATTATAAATTACTGAATGGCTGTCTAGAATACTGTCTATGTGGTGATACATCTAGCTCCGAAGAATATACTGATGTGGCTGCTTTTGTGGGCTGAGTTTGTATGTGGAAGAAAGTCAATTTTCAGAATGATGGTTCAGCTGCTATTTTCGGCAATCTAGAATGTATTCGAACATATCTCAAGCAATATAAAGGGGCTTTCTCAACCCTATATTCTCCGTATAACAGTCTGGAATTCCATGGAATTGAAAGCTATATCCAACTGCAGATTGGGTACGAGGCTTTTGCAGCTGGTCATTTTTGCGCCTTCATGATATTTAAACGGATCACATTATTGTTTGGTGGAGTAGCTGCTCCTTCTCAATGGCGAAAGCTTAAGAGAAACAATAGTCTTCAACAACCAAGATAGTTTCTTTGTGGGGGCAATTTAATCTGTGTGCTGTACTTGCATTGAGATAAAAACCTCGAACTTTGCAGCAGAAAACGATGAGCCCAAGTGATGTCAATGCTCGAATATATTTCCCAATTCCCTTCTTGGTATGATTGTCTATTCTAGTGTAGATGAAGTTCAGCTATTTGATTTTTTTTTTGTTGAAAAGAGATGAAGTTTTGATTCCAGAGTAGAATGATGAAGTTCTAGAAGAATCCAAACATTTCACTCTTCAAACTGCGGTTTGTTGTACAATATAATTGATGAGGAGCAAAATCATATTCACACATATTGTATGTCTAACGAGATTCTATGTGAAGTTCGTGAAACTGTCACAATTTTGTTCGTTTCCTGGTGTGGTTCTCCGCAAGCATTTGAATGTCTTCTCCAATATTTGGTGACTCATAGCTTCTAAAGGAAGCCTATTGATAGGAAGGAACTTGTAGACTTCAAAGAAATTAAAGCTATGATTGGATATATTGAAAGTAGAGATGTAGAACAAACACAAATTTATGTGAAAACCCTAGTCCAGGAAAGAAAAACTACAATGTTGATCTTTCTTATTATTTTCTTATGATAATAAAGGTACAAAGGGGAAAATATTTATAGACAACATGAGTCTAATTAAAATAATAAAAAATTAGAGCAAAGTAAATCTCAACCACCCTTAGGCTTTCAATATGACCCAAACTTGCTATTTCTAACACTCCCTCAAGTAGGGATGTAAATGTTGGAAAGACCCCATT

Coding sequence (CDS)

ATGTGGAAGAAAGTCAATTTTCAGAATGATGGTTCAGCTGCTATTTTCGGCAATCTAGAATGTATTCGAACATATCTCAAGCAATATAAAGGGGCTTTCTCAACCCTATATTCTCCGTATAACAGTCTGGAATTCCATGGAATTGAAAGCTATATCCAACTGCAGATTGGGTACGAGGCTTTTGCAGCTGGTCATTTTTGCGCCTTCATGATATTTAAACGGATCACATTATTGTTTGGTGGAGTAGCTGCTCCTTCTCAATGGCGAAAGCTTAAGAGAAACAATAGTCTTCAACAACCAAGATAG

Protein sequence

MWKKVNFQNDGSAAIFGNLECIRTYLKQYKGAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFGGVAAPSQWRKLKRNNSLQQPR
Homology
[Close]
BLAST of CsGy1G024260 vs. NCBI nr
Match: KGN65907.1 (hypothetical protein Csa_1G537550 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 21  CIRTYLKQYKGAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG 80
           C+ TY    +GAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG
Sbjct: 11  CLFTY--GMEGAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG 70

Query: 81  GVAAPSQWRKLKRNNSLQQPR 102
           GVAAPSQWRKLKRNNSLQQPR
Sbjct: 71  GVAAPSQWRKLKRNNSLQQPR 89

[Close]
BLAST of CsGy1G024260 vs. TrEMBL
Match: tr|A0A0A0LYI2|A0A0A0LYI2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537550 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-33
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0 

Query: 21  CIRTYLKQYKGAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG 80
           C+ TY    +GAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG
Sbjct: 11  CLFTY--GMEGAFSTLYSPYNSLEFHGIESYIQLQIGYEAFAAGHFCAFMIFKRITLLFG 70

Query: 81  GVAAPSQWRKLKRNNSLQQPR 102
           GVAAPSQWRKLKRNNSLQQPR
Sbjct: 71  GVAAPSQWRKLKRNNSLQQPR 89

The following BLAST results are available for this feature:
BLAST of CsGy1G024260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65907.13.7e-3391.36hypothetical protein Csa_1G537550 [Cucumis sativus][more]
BLAST of CsGy1G024260 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G024260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G024260 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYI2|A0A0A0LYI2_CUCSA2.5e-3391.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G537550 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G024260.1CsGy1G024260.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G024260Csa1G537550Cucumber (Chinese Long) v2cgybcuB002
CsGy1G024260CsaV3_1G037160Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G024260Cucurbita maxima (Rimu)cgybcmaB067
CsGy1G024260Cucurbita maxima (Rimu)cgybcmaB076
CsGy1G024260Cucurbita maxima (Rimu)cgybcmaB087
CsGy1G024260Cucurbita maxima (Rimu)cgybcmaB100
CsGy1G024260Cucurbita moschata (Rifu)cgybcmoB063
CsGy1G024260Cucurbita moschata (Rifu)cgybcmoB070
CsGy1G024260Cucurbita moschata (Rifu)cgybcmoB083
CsGy1G024260Cucurbita moschata (Rifu)cgybcmoB094
CsGy1G024260Cucurbita pepo (Zucchini)cgybcpeB011
CsGy1G024260Cucurbita pepo (Zucchini)cgybcpeB019
CsGy1G024260Cucurbita pepo (Zucchini)cgybcpeB072
CsGy1G024260Cucurbita pepo (Zucchini)cgybcpeB086
CsGy1G024260Bottle gourd (USVL1VR-Ls)cgyblsiB019
CsGy1G024260Bottle gourd (USVL1VR-Ls)cgyblsiB031
CsGy1G024260Melon (DHL92) v3.5.1cgybmeB013
CsGy1G024260Melon (DHL92) v3.6.1cgybmedB012
CsGy1G024260Melon (DHL92) v3.6.1cgybmedB071
CsGy1G024260Watermelon (Charleston Gray)cgybwcgB046
CsGy1G024260Watermelon (97103) v1cgybwmB027
CsGy1G024260Wild cucumber (PI 183967)cgybcpiB002
CsGy1G024260Silver-seed gourdcarcgybB0405
CsGy1G024260Silver-seed gourdcarcgybB0429
CsGy1G024260Silver-seed gourdcarcgybB0430
CsGy1G024260Cucumber (Chinese Long) v3cgybcucB049
CsGy1G024260Watermelon (97103) v2cgybwmbB014
CsGy1G024260Watermelon (97103) v2cgybwmbB049
CsGy1G024260Watermelon (97103) v2cgybwmbB045
CsGy1G024260Wax gourdcgybwgoB022
CsGy1G024260Wax gourdcgybwgoB037