CsGy1G018660 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G018660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	metallothiol transferase FosB-like
Location	Chr1 : 16848767 .. 16849090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGACGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGA

mRNA sequence

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGACGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGA

Coding sequence (CDS)

ATGTCCACAACAGAGAAGCAATTGAAAGAGATGAGAATCGAGTACGTAAAGTGTGAGGTGGAAGACGAGGGGATCTTCGTTGACCAGCTCTTCTTCCACGACCCCGATGGCCTAATGATCGAAATTTGCAACTGTGAGAACCTCCCCATCTTACCGGTGTCAGGAGGTGGTGACTCCCCTACCACGGCCACCAACGCAGCTCGTTTCTGCAGTATTCAACAAGCAGAGGAACAACAAAAGCTAAAACAAATTCAAAGCGCCACCGTTCAAAGGATGCAACTCCAGCAACTTCTCATCAACATCCCATGCAACGCCTGGACATGA

Protein sequence

MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSPTTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT

Homology

[Close]

BLAST of CsGy1G018660 vs. NCBI nr
Match: XP_004151211.1 (PREDICTED: uncharacterized protein LOC101203188 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 88  MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
           TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT
Sbjct: 148 TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 194

[Close]

BLAST of CsGy1G018660 vs. NCBI nr
Match: KGN65311.1 (hypothetical protein Csa_1G313810 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
           TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT
Sbjct: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 107

[Close]

BLAST of CsGy1G018660 vs. NCBI nr
Match: XP_008465032.1 (PREDICTED: metallothiol transferase FosB-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 9.7e-48
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M TTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLP++P SGGGDSP
Sbjct: 88  METTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPVVPASGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQR-MQLQQLLINIPCNAWT 108
           TT TN ARFCSIQQAEEQQKLKQIQ+ATVQR MQLQQLLINIPCNA+T
Sbjct: 148 TTPTNTARFCSIQQAEEQQKLKQIQNATVQRTMQLQQLLINIPCNAYT 195

[Close]

BLAST of CsGy1G018660 vs. NCBI nr
Match: XP_022961065.1 (uncharacterized protein LOC111461685 [Cucurbita moschata])

HSP 1 Score: 185.7 bits (470), Expect = 8.5e-44
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIF+DQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 89  MATTEKQLKKMKIEYVKCEVEDDGIFIDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 148

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 149 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 195

[Close]

BLAST of CsGy1G018660 vs. NCBI nr
Match: XP_022987878.1 (uncharacterized protein LOC111485285 [Cucurbita maxima])

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M+TTEKQLK+M+IEYVKCEVED+GIFV+QLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 88  MATTEKQLKKMKIEYVKCEVEDDGIFVNQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
               NAAR CSIQQAE+QQKL+QIQ+A VQ MQLQQLLI+IPCNA T
Sbjct: 148 IAVVNAARLCSIQQAEQQQKLQQIQNAAVQMMQLQQLLISIPCNACT 194

[Close]

BLAST of CsGy1G018660 vs. TAIR10
Match: AT1G80160.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 83.6 bits (205), Expect = 8.3e-17
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+LKEM IEYV+  VE+ GI VDQLFFHDPD  MIEICNC++LP++P++G
Sbjct: 91  MEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAFMIEICNCDSLPVIPLAG 145

[Close]

BLAST of CsGy1G018660 vs. TAIR10
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 80.5 bits (197), Expect = 7.0e-16
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSG 56
           M   EK+L+EM I+YV+  VE+ GI VDQLFFHDPDG MIEICNC++LP++P+ G
Sbjct: 91  MGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVVPLVG 145

[Close]

BLAST of CsGy1G018660 vs. TAIR10
Match: AT2G28420.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.6e-12
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDE-GIFVDQLFFHDPDGLMIEICNCENLPILP 53
           M   EK+LKE++++Y+K  V DE    +DQLFF+DPDG M+EICNCENL ++P
Sbjct: 99  MEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGFMVEICNCENLELVP 151

[Close]

BLAST of CsGy1G018660 vs. TrEMBL
Match: tr|A0A0A0LZB1|A0A0A0LZB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G313810 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP
Sbjct: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 108
           TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT
Sbjct: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQRMQLQQLLINIPCNAWT 107

[Close]

BLAST of CsGy1G018660 vs. TrEMBL
Match: tr|A0A1S3CNC1|A0A1S3CNC1_CUCME (metallothiol transferase FosB-like OS=Cucumis melo OX=3656 GN=LOC103502748 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.4e-48
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           M TTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLP++P SGGGDSP
Sbjct: 88  METTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPVVPASGGGDSP 147

Query: 61  TTATNAARFCSIQQAEEQQKLKQIQSATVQR-MQLQQLLINIPCNAWT 108
           TT TN ARFCSIQQAEEQQKLKQIQ+ATVQR MQLQQLLINIPCNA+T
Sbjct: 148 TTPTNTARFCSIQQAEEQQKLKQIQNATVQRTMQLQQLLINIPCNAYT 195

[Close]

BLAST of CsGy1G018660 vs. TrEMBL
Match: tr|A0A2G3BMY1|A0A2G3BMY1_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_24320 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MST EK+LKEM IEY+KC VE+ GI++DQ+FFHDP+G MIEICNC+NLP++P+SGG    
Sbjct: 87  MSTVEKRLKEMEIEYIKCRVEEGGIYIDQIFFHDPNGTMIEICNCDNLPVIPLSGG--DT 146

Query: 61  TTATNAARFCSIQQAEEQQ 80
                +   CS+QQ + QQ
Sbjct: 147 VLRPCSTLHCSLQQQKVQQ 163

[Close]

BLAST of CsGy1G018660 vs. TrEMBL
Match: tr|A0A1U8EK35|A0A1U8EK35_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_24138 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MST EK+LKEM IEY+KC VE+ GI++DQ+FFHDP+G MIEICNC+NLP++P+SGG    
Sbjct: 87  MSTVEKRLKEMEIEYIKCRVEEGGIYIDQIFFHDPNGTMIEICNCDNLPVIPLSGG--DT 146

Query: 61  TTATNAARFCSIQQAEEQQ 80
                +   CS+QQ + QQ
Sbjct: 147 VLRPCSTLHCSLQQQKVQQ 163

[Close]

BLAST of CsGy1G018660 vs. TrEMBL
Match: tr|A0A2G2YUE9|A0A2G2YUE9_CAPAN (uncharacterized protein LOC107847003 OS=Capsicum annuum OX=4072 GN=LOC107847003 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 1   MSTTEKQLKEMRIEYVKCEVEDEGIFVDQLFFHDPDGLMIEICNCENLPILPVSGGGDSP 60
           MST EK+LKEM IEY+KC VE+ GI++DQ+FFHDP+G MIEICNC+NLP++P+SGG    
Sbjct: 87  MSTVEKRLKEMEIEYIKCRVEEGGIYIDQIFFHDPNGTMIEICNCDNLPVIPLSGG--DT 146

Query: 61  TTATNAARFCSIQQAEEQQ 80
                +   CS+QQ + QQ
Sbjct: 147 VLRPCSTLHCSLQQQKVQQ 163

The following BLAST results are available for this feature:

BLAST of CsGy1G018660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151211.1	5.9e-53	100.00	PREDICTED: uncharacterized protein LOC101203188 [Cucumis sativus]	[more]
KGN65311.1	5.9e-53	100.00	hypothetical protein Csa_1G313810 [Cucumis sativus]	[more]
XP_008465032.1	9.7e-48	91.67	PREDICTED: metallothiol transferase FosB-like [Cucumis melo]	[more]
XP_022961065.1	8.5e-44	84.11	uncharacterized protein LOC111461685 [Cucurbita moschata]	[more]
XP_022987878.1	2.5e-43	84.11	uncharacterized protein LOC111485285 [Cucurbita maxima]	[more]

BLAST of CsGy1G018660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80160.1	8.3e-17	65.45	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT1G15380.1	7.0e-16	63.64	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT2G28420.1	3.6e-12	56.60	Lactoylglutathione lyase / glyoxalase I family protein	[more]

BLAST of CsGy1G018660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G018660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LZB1\|A0A0A0LZB1_CUCSA	3.9e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G313810 PE=4 SV=1	[more]
tr\|A0A1S3CNC1\|A0A1S3CNC1_CUCME	6.4e-48	91.67	metallothiol transferase FosB-like OS=Cucumis melo OX=3656 GN=LOC103502748 PE=4 ...	[more]
tr\|A0A2G3BMY1\|A0A2G3BMY1_CAPCH	1.4e-18	58.23	Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_24320 PE=4 SV=1	[more]
tr\|A0A1U8EK35\|A0A1U8EK35_CAPAN	1.4e-18	58.23	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_24138 PE=4 SV=1	[more]
tr\|A0A2G2YUE9\|A0A2G2YUE9_CAPAN	1.4e-18	58.23	uncharacterized protein LOC107847003 OS=Capsicum annuum OX=4072 GN=LOC107847003 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029068	Glyas_Bleomycin-R_OHBP_Dase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G018660.1	CsGy1G018660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	PANTHER	PTHR10374:SF13	SUBFAMILY NOT NAMED	coord: 1..55
None	No IPR available	PANTHER	PTHR10374	LACTOYLGLUTATHIONE LYASE GLYOXALASE I	coord: 1..55
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	GENE3D	G3DSA:3.10.180.10		coord: 1..47 e-value: 1.6E-5 score: 26.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G018660	Cla012259	Watermelon (97103) v1	cgybwmB081
CsGy1G018660	Csa1G313810	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G018660	MELO3C026649	Melon (DHL92) v3.5.1	cgybmeB051
CsGy1G018660	ClCG06G010960	Watermelon (Charleston Gray)	cgybwcgB065
CsGy1G018660	CSPI01G18660	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G018660	CmaCh10G005600	Cucurbita maxima (Rimu)	cgybcmaB017
CsGy1G018660	CmaCh11G005690	Cucurbita maxima (Rimu)	cgybcmaB031
CsGy1G018660	CmoCh11G005710	Cucurbita moschata (Rifu)	cgybcmoB030
CsGy1G018660	CmoCh10G006020	Cucurbita moschata (Rifu)	cgybcmoB016
CsGy1G018660	Lsi06G009520	Bottle gourd (USVL1VR-Ls)	cgyblsiB057
CsGy1G018660	Cp4.1LG04g09670	Cucurbita pepo (Zucchini)	cgybcpeB130
CsGy1G018660	Cp4.1LG18g04770	Cucurbita pepo (Zucchini)	cgybcpeB044
CsGy1G018660	MELO3C026649.2	Melon (DHL92) v3.6.1	cgybmedB047
CsGy1G018660	CsaV3_1G029840	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G018660	Cla97C06G120180	Watermelon (97103) v2	cgybwmbB065
CsGy1G018660	Carg12152	Silver-seed gourd	carcgybB0034
CsGy1G018660	Carg09904	Silver-seed gourd	carcgybB0133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G018660	Watermelon (97103) v2	cgybwmbB020
CsGy1G018660	Wax gourd	cgybwgoB003
CsGy1G018660	Wax gourd	cgybwgoB096
CsGy1G018660	Cucumber (Gy14) v2	cgybcgybB008
CsGy1G018660	Cucumber (Gy14) v2	cgybcgybB023
CsGy1G018660	Cucurbita maxima (Rimu)	cgybcmaB059
CsGy1G018660	Cucurbita maxima (Rimu)	cgybcmaB137
CsGy1G018660	Cucurbita moschata (Rifu)	cgybcmoB044
CsGy1G018660	Cucurbita moschata (Rifu)	cgybcmoB055
CsGy1G018660	Cucurbita moschata (Rifu)	cgybcmoB129
CsGy1G018660	Cucurbita pepo (Zucchini)	cgybcpeB031
CsGy1G018660	Cucurbita pepo (Zucchini)	cgybcpeB114
CsGy1G018660	Cucurbita pepo (Zucchini)	cgybcpeB146
CsGy1G018660	Cucumber (Chinese Long) v2	cgybcuB016
CsGy1G018660	Cucumber (Chinese Long) v2	cgybcuB028
CsGy1G018660	Bottle gourd (USVL1VR-Ls)	cgyblsiB007
CsGy1G018660	Melon (DHL92) v3.5.1	cgybmeB066
CsGy1G018660	Melon (DHL92) v3.5.1	cgybmeB074
CsGy1G018660	Melon (DHL92) v3.6.1	cgybmedB062
CsGy1G018660	Watermelon (Charleston Gray)	cgybwcgB007
CsGy1G018660	Watermelon (97103) v1	cgybwmB075
CsGy1G018660	Wild cucumber (PI 183967)	cgybcpiB014
CsGy1G018660	Silver-seed gourd	carcgybB0039
CsGy1G018660	Silver-seed gourd	carcgybB0570
CsGy1G018660	Cucumber (Chinese Long) v3	cgybcucB015
CsGy1G018660	Cucumber (Chinese Long) v3	cgybcucB032