CsGy1G018460 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G018460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionGlutamate receptor
LocationChr1 : 16580619 .. 16580964 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGAAGGCATGGGTTTTGAAATGTTGAAGATCGGTGCACTCTTCCTTAACATATTAGTACTGTCGGTAGTGGCAGCAGAGGCGGACAAGACGGCTGCGGCGGTAAACTTGAAGGTGGGTGTGGTTTTGGATTTGAATGATGTTGTTGGGAAGATGGGTTCGAGTTGCATTAATATGACGCTCTCTGATTTTTATGCCAATCGAAGTTATTATAAGACGAAATTGATTCTCAATCCCATGGACTCCAATGGAACGAACTATCGTTGGTGCAGCTACAGTAGGTTTGTTTTAATATTTATTCTTATTTTTTATCAGTTCAAAACGTTTAAAAAAACAAGGTTAA

mRNA sequence

ATGAGGGAAGGCATGGGTTTTGAAATGTTGAAGATCGGTGCACTCTTCCTTAACATATTAGTACTGTCGGTAGTGGCAGCAGAGGCGGACAAGACGGCTGCGGCGGTAAACTTGAAGGTGGGTGTGGTTTTGGATTTGAATGATGTTGTTGGGAAGATGGGTTCGAGTTGCATTAATATGACGCTCTCTGATTTTTATGCCAATCGAAGTTATTATAAGACGAAATTGATTCTCAATCCCATGGACTCCAATGGAACGAACTATCGTTGGTGCAGCTACAGTAGTTCAAAACGTTTAAAAAAACAAGGTTAA

Coding sequence (CDS)

ATGAGGGAAGGCATGGGTTTTGAAATGTTGAAGATCGGTGCACTCTTCCTTAACATATTAGTACTGTCGGTAGTGGCAGCAGAGGCGGACAAGACGGCTGCGGCGGTAAACTTGAAGGTGGGTGTGGTTTTGGATTTGAATGATGTTGTTGGGAAGATGGGTTCGAGTTGCATTAATATGACGCTCTCTGATTTTTATGCCAATCGAAGTTATTATAAGACGAAATTGATTCTCAATCCCATGGACTCCAATGGAACGAACTATCGTTGGTGCAGCTACAGTAGTTCAAAACGTTTAAAAAAACAAGGTTAA

Protein sequence

MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDSNGTNYRWCSYSSSKRLKKQG
Homology
[Close]
BLAST of CsGy1G018460 vs. NCBI nr
Match: KGN47385.1 (hypothetical protein Csa_6G308940 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINM 60
          MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLN VVGKMG SC NM
Sbjct: 1  MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLN-VVGKMGLSCTNM 60

Query: 61 TLSDFYANRSYYKTKLILNPMDSNGTNYRWCSYS 95
          TLSDFYANRSYYKTKLILNPMDSNGTNY WC+Y+
Sbjct: 61 TLSDFYANRSYYKTKLILNPMDSNGTNYCWCNYN 93

[Close]
BLAST of CsGy1G018460 vs. NCBI nr
Match: XP_023002214.1 (glutamate receptor 2.2-like [Cucurbita maxima])

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0 

Query: 1  MREGMGFEMLKIGALFLNIL--VLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCI 60
          +R G G  ++    +FLN+L  V +   A  ++ A  V +KVGVVLDLN VVG+MG SC+
Sbjct: 8  LRGGFGVVVI---VVFLNMLVTVATTEMAAEEEAAGKVKVKVGVVLDLNLVVGQMGLSCV 67

Query: 61 NMTLSDFYANRSYYKTKLILNPMDSNGT 87
          +M L+D Y++RSYYKT++ L+ +DSN T
Sbjct: 68 SMALADLYSSRSYYKTRVTLSTIDSNDT 92

[Close]
BLAST of CsGy1G018460 vs. NCBI nr
Match: XP_012455154.1 (PREDICTED: glutamate receptor 2.8-like [Gossypium raimondii] >XP_012455221.1 PREDICTED: glutamate receptor 2.8-like [Gossypium raimondii] >KJB07709.1 hypothetical protein B456_001G039900 [Gossypium raimondii])

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-10
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+ +   V A++  T   A + +KVGVVLD++ +VGK+G SC+NM LSDFYA   +Y
Sbjct: 19 LFLNVCLSEGVVAQSQNTTGDATIPVKVGVVLDMDSLVGKIGMSCMNMALSDFYATHPHY 78

Query: 75 KTKLILNPMDSNG 86
          KT+L+ N  DS G
Sbjct: 79 KTRLVFNTKDSMG 91

[Close]
BLAST of CsGy1G018460 vs. NCBI nr
Match: XP_016744596.1 (PREDICTED: glutamate receptor 2.8-like [Gossypium hirsutum])

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+     V A++  T   A + +KVGVVLD++ +VGK+G SC+NM LSDFYA   +Y
Sbjct: 19 LFLNVCFSEGVVAQSQNTTGDATIPVKVGVVLDMDSLVGKIGMSCMNMALSDFYATHPHY 78

Query: 75 KTKLILNPMDSNG 86
          KT+L+ N  DS G
Sbjct: 79 KTRLVFNTKDSMG 91

[Close]
BLAST of CsGy1G018460 vs. NCBI nr
Match: XP_023537857.1 (glutamate receptor 2.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09
Identity = 37/55 (67.27%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 32 TAAAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDSNGT 87
          T AAV +KVGVVL+ N   GKMG +CI+M LSDFYA+RS+YKTK+IL  +DSNGT
Sbjct: 25 TVAAVEVKVGVVLNPN-AFGKMGMACISMALSDFYASRSHYKTKVILKTVDSNGT 78

[Close]
BLAST of CsGy1G018460 vs. TAIR10
Match: AT5G48400.2 (Glutamate receptor family protein)

HSP 1 Score: 50.4 bits (119), Expect = 7.5e-07
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 36 VNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDSNG 86
          + ++VG+VLDL  V GK+  S ++M LSDFY N + YKT+L L   DS+G
Sbjct: 38 IRVRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHG 87

[Close]
BLAST of CsGy1G018460 vs. TAIR10
Match: AT2G29110.1 (glutamate receptor 2.8)

HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0 

Query: 38 LKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDS 84
          +KVGVVLDLN    K+  + IN+ LSDFY +   Y+T+L L+  DS
Sbjct: 33 IKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDS 78

[Close]
BLAST of CsGy1G018460 vs. TAIR10
Match: AT2G29100.1 (glutamate receptor 2.9)

HSP 1 Score: 44.7 bits (104), Expect = 4.1e-05
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0 

Query: 38 LKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDS 84
          +KVGVVLDLN    K+  + I M +SDFYA+   Y T+L L+  DS
Sbjct: 30 IKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDS 75

[Close]
BLAST of CsGy1G018460 vs. TAIR10
Match: AT5G11180.1 (glutamate receptor 2.6)

HSP 1 Score: 44.7 bits (104), Expect = 4.1e-05
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0 

Query: 16 FLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTK 75
          F+N LVL             + ++VG+VLD N  +  +    INM+LS+FY   + +KT+
Sbjct: 19 FINFLVLL-----GKSQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTR 78

Query: 76 LILNPMDSNGT 87
          ++LN  DS  T
Sbjct: 79 IVLNIRDSKRT 84

[Close]
BLAST of CsGy1G018460 vs. TAIR10
Match: AT2G29120.1 (glutamate receptor 2.7)

HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 0 

Query: 38 LKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDS 84
          +KVGVVLDL+    K+  + IN++LSDFY   S Y T+L ++  DS
Sbjct: 39 IKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTTRLAIHIRDS 84

[Close]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match: sp|Q9LV72|GLR12_ARATH (Glutamate receptor 1.2 OS=Arabidopsis thaliana OX=3702 GN=GLR1.2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-05
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 36 VNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDSNG 86
          + ++VG+VLDL  V GK+  S ++M LSDFY N + YKT+L L   DS+G
Sbjct: 38 IRVRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHG 87

[Close]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match: sp|Q9LFN5|GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKT 74
          +FL  LVLS+  ++ +    A+ +KVG+VL  N  +  +    INM+LS+FY   + +KT
Sbjct: 18 IFLVFLVLSLGKSQKE----ALQVKVGIVLGSNVTLADLSLRAINMSLSEFYNTHNGFKT 77

Query: 75 KLILNPMDSNGT 87
          +++LN  DS  T
Sbjct: 78 RIVLNVRDSKQT 85

[Close]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match: sp|Q9C5V5|GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0 

Query: 38 LKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDS 84
          +KVGVVLDLN    K+  + IN+ LSDFY +   Y+T+L L+  DS
Sbjct: 33 IKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDS 78

[Close]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match: sp|Q9LFN8|GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 7.4e-04
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0 

Query: 16 FLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTK 75
          F+N LVL             + ++VG+VLD N  +  +    INM+LS+FY   + +KT+
Sbjct: 19 FINFLVLL-----GKSQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTR 78

Query: 76 LILNPMDSNGT 87
          ++LN  DS  T
Sbjct: 79 IVLNIRDSKRT 84

[Close]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match: sp|O81078|GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.4e-04
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0 

Query: 38 LKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYYKTKLILNPMDS 84
          +KVGVVLDLN    K+  + I M +SDFYA+   Y T+L L+  DS
Sbjct: 30 IKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDS 75

[Close]
BLAST of CsGy1G018460 vs. TrEMBL
Match: tr|A0A0A0KCD3|A0A0A0KCD3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G308940 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.9e-39
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLNDVVGKMGSSCINM 60
          MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLN VVGKMG SC NM
Sbjct: 1  MREGMGFEMLKIGALFLNILVLSVVAAEADKTAAAVNLKVGVVLDLN-VVGKMGLSCTNM 60

Query: 61 TLSDFYANRSYYKTKLILNPMDSNGTNYRWCSYS 95
          TLSDFYANRSYYKTKLILNPMDSNGTNY WC+Y+
Sbjct: 61 TLSDFYANRSYYKTKLILNPMDSNGTNYCWCNYN 93

[Close]
BLAST of CsGy1G018460 vs. TrEMBL
Match: tr|A0A0D2PLI2|A0A0D2PLI2_GOSRA (Glutamate receptor OS=Gossypium raimondii OX=29730 GN=B456_001G039900 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.9e-10
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+ +   V A++  T   A + +KVGVVLD++ +VGK+G SC+NM LSDFYA   +Y
Sbjct: 19 LFLNVCLSEGVVAQSQNTTGDATIPVKVGVVLDMDSLVGKIGMSCMNMALSDFYATHPHY 78

Query: 75 KTKLILNPMDSNG 86
          KT+L+ N  DS G
Sbjct: 79 KTRLVFNTKDSMG 91

[Close]
BLAST of CsGy1G018460 vs. TrEMBL
Match: tr|A0A1U8P056|A0A1U8P056_GOSHI (Glutamate receptor OS=Gossypium hirsutum OX=3635 GN=LOC107953718 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.7e-10
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+     V A++  T   A + +KVGVVLD++ +VGK+G SC+NM LSDFYA   +Y
Sbjct: 19 LFLNVCFSEGVVAQSQNTTGDATIPVKVGVVLDMDSLVGKIGMSCMNMALSDFYATHPHY 78

Query: 75 KTKLILNPMDSNG 86
          KT+L+ N  DS G
Sbjct: 79 KTRLVFNTKDSMG 91

[Close]
BLAST of CsGy1G018460 vs. TrEMBL
Match: tr|A0A2P5RK57|A0A2P5RK57_GOSBA (Glutamate receptor OS=Gossypium barbadense OX=3634 GN=GOBAR_DD15879 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+ +   V A++  T   A + +KVGVVLD++ +VGK+G SC+NM LS+FYA   +Y
Sbjct: 19 LFLNVCLSEGVVAQSQNTTGDATIPVKVGVVLDMDSLVGKIGMSCMNMALSEFYATHPHY 78

Query: 75 KTKLILNPMDSNG 86
          KT+L+ N  DS G
Sbjct: 79 KTRLVFNTKDSMG 91

[Close]
BLAST of CsGy1G018460 vs. TrEMBL
Match: tr|A0A2P5XIL6|A0A2P5XIL6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17441 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-09
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 15 LFLNILVLSVVAAEADKTA--AAVNLKVGVVLDLNDVVGKMGSSCINMTLSDFYANRSYY 74
          LFLN+ +   V A++  T   A + +KVGVVLD++ VVGK+G SC+NM L DFYA   +Y
Sbjct: 19 LFLNVCLSQGVTAQSQNTTGDATIPVKVGVVLDMDSVVGKIGMSCLNMALLDFYATHPHY 78

Query: 75 KTKLILNPMDS 84
          KT+L+ N  DS
Sbjct: 79 KTRLVFNTKDS 89

The following BLAST results are available for this feature:
BLAST of CsGy1G018460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47385.11.4e-3893.62hypothetical protein Csa_6G308940 [Cucumis sativus][more]
XP_023002214.12.0e-1047.73glutamate receptor 2.2-like [Cucurbita maxima][more]
XP_012455154.15.9e-1050.68PREDICTED: glutamate receptor 2.8-like [Gossypium raimondii] >XP_012455221.1 PRE... [more]
XP_016744596.11.0e-0950.68PREDICTED: glutamate receptor 2.8-like [Gossypium hirsutum][more]
XP_023537857.11.7e-0967.27glutamate receptor 2.1-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy1G018460 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48400.27.5e-0750.00Glutamate receptor family protein[more]
AT2G29110.11.1e-0550.00glutamate receptor 2.8[more]
AT2G29100.14.1e-0550.00glutamate receptor 2.9[more]
AT5G11180.14.1e-0535.21glutamate receptor 2.6[more]
AT2G29120.12.0e-0447.83glutamate receptor 2.7[more]
BLAST of CsGy1G018460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LV72|GLR12_ARATH1.3e-0550.00Glutamate receptor 1.2 OS=Arabidopsis thaliana OX=3702 GN=GLR1.2 PE=2 SV=1[more]
sp|Q9LFN5|GLR25_ARATH1.9e-0437.50Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2[more]
sp|Q9C5V5|GLR28_ARATH1.9e-0450.00Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2[more]
sp|Q9LFN8|GLR26_ARATH7.4e-0435.21Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2[more]
sp|O81078|GLR29_ARATH7.4e-0450.00Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1[more]
BLAST of CsGy1G018460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KCD3|A0A0A0KCD3_CUCSA8.9e-3993.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G308940 PE=4 SV=1[more]
tr|A0A0D2PLI2|A0A0D2PLI2_GOSRA3.9e-1050.68Glutamate receptor OS=Gossypium raimondii OX=29730 GN=B456_001G039900 PE=3 SV=1[more]
tr|A0A1U8P056|A0A1U8P056_GOSHI6.7e-1050.68Glutamate receptor OS=Gossypium hirsutum OX=3635 GN=LOC107953718 PE=3 SV=1[more]
tr|A0A2P5RK57|A0A2P5RK57_GOSBA1.1e-0949.32Glutamate receptor OS=Gossypium barbadense OX=3634 GN=GOBAR_DD15879 PE=3 SV=1[more]
tr|A0A2P5XIL6|A0A2P5XIL6_GOSBA1.9e-0950.70Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17441 PE=3 SV... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035235 ionotropic glutamate receptor signaling pathway
biological_process GO:0006811 ion transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G018460.1CsGy1G018460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34836FAMILY NOT NAMEDcoord: 14..84

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G018460CsaV3_1G029600Cucumber (Chinese Long) v3cgybcucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G018460Wild cucumber (PI 183967)cgybcpiB002
CsGy1G018460Wild cucumber (PI 183967)cgybcpiB015
CsGy1G018460Cucumber (Chinese Long) v3cgybcucB017
CsGy1G018460Watermelon (97103) v2cgybwmbB025
CsGy1G018460Wax gourdcgybwgoB006
CsGy1G018460Cucumber (Gy14) v2cgybcgybB010
CsGy1G018460Cucurbita maxima (Rimu)cgybcmaB136
CsGy1G018460Cucurbita pepo (Zucchini)cgybcpeB030
CsGy1G018460Cucumber (Chinese Long) v2cgybcuB002
CsGy1G018460Cucumber (Chinese Long) v2cgybcuB017
CsGy1G018460Bottle gourd (USVL1VR-Ls)cgyblsiB008
CsGy1G018460Melon (DHL92) v3.6.1cgybmedB064
CsGy1G018460Melon (DHL92) v3.5.1cgybmeB068
CsGy1G018460Watermelon (Charleston Gray)cgybwcgB011
CsGy1G018460Watermelon (97103) v1cgybwmB078