CsGy1G015720 (gene) Cucumber (Gy14) v2

NameCsGy1G015720
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionagamous-like MADS-box protein AGL80
LocationChr1 : 11655284 .. 11655943 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTACTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGCATTGAGGCATGTGCTATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACTCTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGCCTACCAGAGATGGAGCAATGTAAGAAGATGGTCAACCAAGAGACCTTCCTTCGTGATCGTATTGCAAAGGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGAGTCATGTTTCAAAGCCTCGTTGCTGGAGCAACTCCGCCGCTAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGTTGGTTGATCAAAAGATGGCTGATATTGGTAAGAGAATGGAGTTGCTTACAGTAAATCGATCGTCACGTGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGCTAATGATGAAGATCATATGGGATTCAATATTGGAGATGATGTGATTCAACTTCCTAGCTTTGGGGAGGATGATAATCATGGTACTTTTTGGTCAAATAATAATGTCATTTTCCCTTGA

mRNA sequence

ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTACTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGCATTGAGGCATGTGCTATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACTCTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGCCTACCAGAGATGGAGCAATGTAAGAAGATGGTCAACCAAGAGACCTTCCTTCGTGATCGTATTGCAAAGGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGAGTCATGTTTCAAAGCCTCGTTGCTGGAGCAACTCCGCCGCTAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGTTGGTTGATCAAAAGATGGCTGATATTGGTAAGAGAATGGAGTTGCTTACAGTAAATCGATCGTCACGTGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGCTAATGATGAAGATCATATGGGATTCAATATTGGAGATGATGTGATTCAACTTCCTAGCTTTGGGGAGGATGATAATCATGGTACTTTTTGGTCAAATAATAATGTCATTTTCCCTTGA

Coding sequence (CDS)

ATGACAAGAAAGAAGGTGAAACTTGCATACATTACAAATGATGCATCAAGAAAAGCCACATTCAAGAAAAGGAAAAAGGGTTTACTGAAGAAGCTGGCTGAGCTTACCACTCTATGTGGCATTGAGGCATGTGCTATAATCTTCAATCCCTCCAATTCACAACCTGACCTTTGGCCCTCCACTCTAGGCCTCCAAAAGGTTCTCTCTAAGTTCAAAAGCCTACCAGAGATGGAGCAATGTAAGAAGATGGTCAACCAAGAGACCTTCCTTCGTGATCGTATTGCAAAGGCTGCTGACCAACTCAAGAAGCTACAAAGGGAGAATCGTGAGAAGGAGATCACTCGAGTCATGTTTCAAAGCCTCGTTGCTGGAGCAACTCCGCCGCTAGATCTCAATGTCATCGATTTGAATGACCTTGGTTGGTTGGTTGATCAAAAGATGGCTGATATTGGTAAGAGAATGGAGTTGCTTACAGTAAATCGATCGTCACGTGTGGCGACAAATGAGCCGTCGTGGTTTATGGAGATGGTGAATCAAGGAGCTAATGATGAAGATCATATGGGATTCAATATTGGAGATGATGTGATTCAACTTCCTAGCTTTGGGGAGGATGATAATCATGGTACTTTTTGGTCAAATAATAATGTCATTTTCCCTTGA

Protein sequence

MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP
BLAST of CsGy1G015720 vs. NCBI nr
Match: XP_004139619.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65069.1 hypothetical protein Csa_1G191680 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 2.5e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG 180
           LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG 180

Query: 181 ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 220
           ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP
Sbjct: 181 ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 219

BLAST of CsGy1G015720 vs. NCBI nr
Match: XP_008458956.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 6.7e-112
Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITR+MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNR-SSRVATNEPSWFMEMVNQ 180
           LVAGATPP DLNVIDLNDLGWLVDQKMADIGKRME LTVNR SS VATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180

Query: 181 GANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 220
           G NDEDHMGFNIGDDVIQLPSFGE DNHGTFWS NNVIFP
Sbjct: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWS-NNVIFP 219

BLAST of CsGy1G015720 vs. NCBI nr
Match: XP_023520234.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 3.5e-84
Identity = 166/216 (76.85%), Postives = 184/216 (85.19%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITR+MF+S
Sbjct: 61  IVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSR--VATNEPSWFMEMVN 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+ELLT   +    V+  EPSWFMEM++
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPPVVSAVEPSWFMEMMS 180

Query: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNN 215
            GA D D MGF I DDVIQLP+   DDNHG FWSNN
Sbjct: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 212

BLAST of CsGy1G015720 vs. NCBI nr
Match: XP_022927107.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata])

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRENREKEITR+MF+S
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATN--EPSWFMEMVN 180
           LVAGATPP DLN+IDL DL W VD+ M D+ KR+ELLT   +     +  EPSWFMEM++
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNN 215
            GA D D MGF I DDVIQLP+   DDNHG FWSNN
Sbjct: 181 HGAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 212

BLAST of CsGy1G015720 vs. NCBI nr
Match: XP_023001635.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITR+MF+S
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSR--VATNEPSWFMEMVN 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+ELLT   +    V+  EPSWFMEM++
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180

Query: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNN 215
             A D D MGF I DDVIQLP+   DDNHG FWSNN
Sbjct: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNHGAFWSNN 212

BLAST of CsGy1G015720 vs. TAIR10
Match: AT5G48670.1 (AGAMOUS-like 80)

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 96/171 (56.14%), Postives = 137/171 (80.12%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND+SRKATFKKRKKGL+KK+ EL+TLCGI ACAII++P ++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
             G+Q+V+S+F++LPEM+Q KKMV+QE FL+ RIAKA + L++ ++++RE E+T VMFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELL-----TVNRSSRVA 167
           L+ G      LN++DLNDLG++++Q + D+ +R+E+L      +  SS VA
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVA 170

BLAST of CsGy1G015720 vs. TAIR10
Match: AT5G26630.1 (MADS-box transcription factor family protein)

HSP 1 Score: 147.9 bits (372), Expect = 7.3e-36
Identity = 76/171 (44.44%), Postives = 116/171 (67.84%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTR+KVK+ +I N+ +RK+TFKKRKKGLLKK  EL  LCG+   A++ +P    P++WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
                +V+S++K++  M++ KKMVNQETFL+ RI KA +  KKL++EN+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPS 172
           L +G T    +   +L D G++++Q++ D+ +R+E+L  N       NEPS
Sbjct: 121 L-SGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRN-------NEPS 163

BLAST of CsGy1G015720 vs. TAIR10
Match: AT1G65300.1 (AGAMOUS-like 38)

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 76/161 (47.20%), Postives = 109/161 (67.70%), Query Frame = 0

Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           ++K+KL+ I N  SRK TF KRKKG+ KKL EL TLCG+EACA++++P NS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLV 122
           G++ V+SKF  L  +++ KKMV+QETF+  RIAK  +QL+KL+ EN   +I  +MF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSS 164
            G T   +L+  DL DL   +D+ +  + +R+E+L  N  S
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGES 161

BLAST of CsGy1G015720 vs. TAIR10
Match: AT1G65330.1 (MADS-box transcription factor family protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 0

Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           R K+KL++I ND+ RK TF KRKKG+LKK  EL TLCG++ACA+I +P NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLV 122
           G+++V+SKF     +++ KKMV+QETFLR RIAK  ++L+KL+ ENR  +I  +MF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEP 171
            G      L+  DL DL   +++ +  + +R+E+L  N  S  +   P
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPP 168

BLAST of CsGy1G015720 vs. TAIR10
Match: AT3G05860.1 (MADS-box transcription factor family protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 69/150 (46.00%), Postives = 102/150 (68.00%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKK+ L+YITN++ RKATF KRKKGL+KK+ EL+ LCGIEACA+I++P NS P++WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
              ++ V+  F+ L ++EQ KKMV+ E F+R  I+K  +   K   +N E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADI 151
           L++G    L+L   +  DL   +DQ + ++
Sbjct: 121 LLSGKGEKLNLTDRNREDLCKYIDQYLKEL 149

BLAST of CsGy1G015720 vs. Swiss-Prot
Match: sp|Q9FJK3|AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-48
Identity = 96/171 (56.14%), Postives = 137/171 (80.12%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND+SRKATFKKRKKGL+KK+ EL+TLCGI ACAII++P ++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
             G+Q+V+S+F++LPEM+Q KKMV+QE FL+ RIAKA + L++ ++++RE E+T VMFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELL-----TVNRSSRVA 167
           L+ G      LN++DLNDLG++++Q + D+ +R+E+L      +  SS VA
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVA 170

BLAST of CsGy1G015720 vs. Swiss-Prot
Match: sp|Q7XJK8|PHE2_ARATH (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.5e-34
Identity = 76/161 (47.20%), Postives = 109/161 (67.70%), Query Frame = 0

Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           ++K+KL+ I N  SRK TF KRKKG+ KKL EL TLCG+EACA++++P NS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLV 122
           G++ V+SKF  L  +++ KKMV+QETF+  RIAK  +QL+KL+ EN   +I  +MF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSS 164
            G T   +L+  DL DL   +D+ +  + +R+E+L  N  S
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGES 161

BLAST of CsGy1G015720 vs. Swiss-Prot
Match: sp|O80805|PHE1_ARATH (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 0

Query: 3   RKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTL 62
           R K+KL++I ND+ RK TF KRKKG+LKK  EL TLCG++ACA+I +P NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLV 122
           G+++V+SKF     +++ KKMV+QETFLR RIAK  ++L+KL+ ENR  +I  +MF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEP 171
            G      L+  DL DL   +++ +  + +R+E+L  N  S  +   P
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPP 168

BLAST of CsGy1G015720 vs. Swiss-Prot
Match: sp|Q7XJK6|AGL36_ARATH (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.5e-30
Identity = 72/167 (43.11%), Postives = 104/167 (62.28%), Query Frame = 0

Query: 4   KKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLG 63
           KKVKL+ I N+ SRK +F KRK G+ KKL EL+TLCG++ACA+I++P    P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLVA 123
            +KV S+F  +P   + KKM++QET+L +RI KA +QLK L  ENRE ++ R MF   V 
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEP 171
           G       +  DL DL   ++  +  +  R+E +  N  S +++  P
Sbjct: 122 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKENGESLLSSVSP 167

BLAST of CsGy1G015720 vs. Swiss-Prot
Match: sp|Q7XJK5|AGL90_ARATH (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29
Identity = 72/167 (43.11%), Postives = 103/167 (61.68%), Query Frame = 0

Query: 4   KKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPSTLG 63
           KKVKL+ I N+ SRK +F KRK G+ KKL EL+TLCG++ACA+I++P    P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQSLVA 123
            +KV SKF  +P   + +KM++QET L +RI KA +QLK L  ENRE ++ R MF   V 
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMF-DCVE 121

Query: 124 GATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEP 171
           G       +  DL DL   ++  +  +  R+E +  N  S +++  P
Sbjct: 122 GKMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKENGESLLSSVSP 167

BLAST of CsGy1G015720 vs. TrEMBL
Match: tr|A0A0A0LVU5|A0A0A0LVU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.7e-119
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG 180
           LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATNEPSWFMEMVNQG 180

Query: 181 ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 220
           ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP
Sbjct: 181 ANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 219

BLAST of CsGy1G015720 vs. TrEMBL
Match: tr|A0A1S3C968|A0A1S3C968_CUCME (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.4e-112
Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
           TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITR+MFQS
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNR-SSRVATNEPSWFMEMVNQ 180
           LVAGATPP DLNVIDLNDLGWLVDQKMADIGKRME LTVNR SS VATNEPSWFMEMVNQ
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATNEPSWFMEMVNQ 180

Query: 181 GANDEDHMGFNIGDDVIQLPSFGEDDNHGTFWSNNNVIFP 220
           G NDEDHMGFNIGDDVIQLPSFGE DNHGTFWS NNVIFP
Sbjct: 181 GGNDEDHMGFNIGDDVIQLPSFGEYDNHGTFWS-NNVIFP 219

BLAST of CsGy1G015720 vs. TrEMBL
Match: tr|W9R845|W9R845_9ROSA (Agamous-like MADS-box protein AGL80 OS=Morus notabilis OX=981085 GN=L484_022655 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.7e-59
Identity = 125/242 (51.65%), Postives = 171/242 (70.66%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYITND++RKATFKKRKKGL+KK+ EL+TLC I+AC II++P ++QP+++PS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLIKKITELSTLCDIDACVIIYSPYDAQPEVYPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            LGLQ+VL++FK +PEMEQ KKMVNQE FLR RIAKA +QLKK +++NREKEITR+MFQS
Sbjct: 61  PLGLQQVLARFKKMPEMEQSKKMVNQECFLRQRIAKANEQLKKQRKDNREKEITRLMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRME---------------LLTVNRSSRV 180
           L  GA     L+++DLNDLGWL++Q + +I ++ME               +L ++ + + 
Sbjct: 121 L-TGAKGLQGLSILDLNDLGWLIEQNLKEINRKMERIGGRQMHESKPRPGILAMHAAEKK 180

Query: 181 ATNE--------------PSWFMEMVNQGANDEDHMGFNIGDDVIQLPSFGEDDNHGTFW 214
           A ++              P WFM+++NQ    + H+GF  G + + LP FG D N+G  W
Sbjct: 181 ARSDVEAEIRAPPGFEAKPQWFMDLMNQAHEQQQHVGFGAGGEELMLPHFG-DQNNG-HW 239

BLAST of CsGy1G015720 vs. TrEMBL
Match: tr|V4SWL0|V4SWL0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013728mg PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 130/243 (53.50%), Postives = 172/243 (70.78%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND++RKATFKKRKKGLLKK++EL+TLCGI+ACAIIF+P +SQP++WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            LG+Q+VLS+FK +PEMEQ KKMVNQ++FLR RIAKA +QLKK +++NREKEIT+VMFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATN------------ 180
           L   A   L+LN++DLNDLGWL++Q + +I KRME L+   S+  ++N            
Sbjct: 121 LTGKAL--LNLNMMDLNDLGWLIEQNLKEICKRMETLSKGTSTHNSSNYGVVKNNGEASQ 180

Query: 181 ------------------EPSWFMEMVNQGANDEDHMGFNIGDDVIQLPSFGEDDNHGTF 214
                             +  W ++++    N ++HMGF  G + I  P FGE  +H T 
Sbjct: 181 QQVDKSSGFDQMSMEAMQKQQWLLDLM----NPQEHMGF--GGEEIMYP-FGE-SSHSTL 233

BLAST of CsGy1G015720 vs. TrEMBL
Match: tr|A0A2H5NT82|A0A2H5NT82_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073790 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 130/243 (53.50%), Postives = 172/243 (70.78%), Query Frame = 0

Query: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60
           MTRKKVKLAYI+ND++RKATFKKRKKGLLKK++EL+TLCGI+ACAIIF+P +SQP++WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120
            LG+Q+VLS+FK +PEMEQ KKMVNQ++FLR RIAKA +QLKK +++NREKEIT+VMFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSRVATN------------ 180
           L   A   L+LN++DLNDLGWL++Q + +I KRME L+   S+  ++N            
Sbjct: 121 LTGKAL--LNLNMMDLNDLGWLIEQNLKEICKRMETLSKGTSTHNSSNYGVVKNNGEASQ 180

Query: 181 ------------------EPSWFMEMVNQGANDEDHMGFNIGDDVIQLPSFGEDDNHGTF 214
                             +  W ++++    N ++HMGF  G + I  P FGE  +H T 
Sbjct: 181 QQVDKSSGFDQMSMEAMQKQQWLLDLM----NPQEHMGF--GGEEIMYP-FGE-SSHSTL 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139619.12.5e-119100.00PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65069.1 hyp... [more]
XP_008458956.16.7e-11296.36PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo][more]
XP_023520234.13.5e-8476.85agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo][more]
XP_022927107.12.9e-8375.93agamous-like MADS-box protein AGL80 [Cucurbita moschata][more]
XP_023001635.11.1e-8275.93agamous-like MADS-box protein AGL80 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G48670.12.6e-4956.14AGAMOUS-like 80[more]
AT5G26630.17.3e-3644.44MADS-box transcription factor family protein[more]
AT1G65300.13.6e-3547.20AGAMOUS-like 38[more]
AT1G65330.11.7e-3245.24MADS-box transcription factor family protein[more]
AT3G05860.11.9e-3146.00MADS-box transcription factor family protein[more]
Match NameE-valueIdentityDescription
sp|Q9FJK3|AGL80_ARATH4.7e-4856.14Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=... [more]
sp|Q7XJK8|PHE2_ARATH6.5e-3447.20MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P... [more]
sp|O80805|PHE1_ARATH3.0e-3145.24MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P... [more]
sp|Q7XJK6|AGL36_ARATH7.5e-3043.11Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=... [more]
sp|Q7XJK5|AGL90_ARATH2.8e-2943.11Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LVU5|A0A0A0LVU5_CUCSA1.7e-119100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1[more]
tr|A0A1S3C968|A0A1S3C968_CUCME4.4e-11296.36agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4... [more]
tr|W9R845|W9R845_9ROSA9.7e-5951.65Agamous-like MADS-box protein AGL80 OS=Morus notabilis OX=981085 GN=L484_022655 ... [more]
tr|V4SWL0|V4SWL0_9ROSI2.2e-5853.50Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013728mg PE=4 ... [more]
tr|A0A2H5NT82|A0A2H5NT82_CITUN2.2e-5853.50Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073790 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000982transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0000987core promoter proximal region sequence-specific DNA binding
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033897MADS_SRF-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005634 nucleus
molecular_function GO:0000987 core promoter proximal region sequence-specific DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000982 transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G015720.1CsGy1G015720.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..114
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..167
NoneNo IPR availablePANTHERPTHR11945:SF355AGAMOUS-LIKE MADS-BOX PROTEIN AGL36-RELATEDcoord: 1..167
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 24.94
coord: 3..23
score: 40.11
coord: 23..38
score: 60.12
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 7.7E-24
score: 95.2
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 11..52
e-value: 3.5E-17
score: 61.5
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..52
score: 17.605
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 13..95
e-value: 1.2E-13
score: 52.9
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 2..95
IPR033897MADS SRF-likeCDDcd00266MADS_SRF_likecoord: 2..85
e-value: 5.84098E-21
score: 83.0783

The following gene(s) are paralogous to this gene:

None