CsGy1G015710 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G015710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ABC transporter G family member 33
Location	Chr1 : 11640846 .. 11644364 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACCAGCGGCAACCCACTACCTCTCCCCTTCTATTTCATCCTACTCGTTCAGAATCTCAGTTCAGAATCTCGGTCTCAAACTTCTTGAAAGAGAAAGAGCTGTGACTGCTGTGCTGGGCGAACTGCCTAAAGGGCGAAGACCTTAATGTTCAGCCTTTTGATTTTGATGAAAGGTACGTAGTGGAAGACTCCGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGGTACGTAGTATTCTTTTCTCTTTGTCGATTATCTATGATTAAATTGTTCTATCTTGTTCCCTTCCATTTTGGGGTTTTCAGTTTATATTAGGCTAATGTTTCGGTTGGAATGTCGTCGTTAGATTTCCTTATGGTTAGACACTGGAAGCAATTTGTTTTGATTACCGTGTGAATGTTCTAGTTGTTTTACCTATTTAAACACATCAAATGAAGGAAATGTATTTAAACCGACGATGCAAATCTTGAAGTTGATGTTTTCTCCAATGAAATCAACTGGCTGATTCTTGTTTTGATTAACTAGAATGGACATTGATGTTGAAGATGACAATTACTTCATGGTAGCCTTTTTTTTTGCTCTCATTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCCTGGGCCTATCTATGCTATTCCAGCTTAATCAAGATCCCACTTTCCCTCGGCGAATCCTTAGTTTGGACTTCTCTTACTCACTACGTCATTGGCTTCACCCCTCAACCTATCAGGTTAGTTTTCATGAACTCTTTAGTTTTGTAACCATTCTCAAAATGCCATAATTTGGATTAAACGCTTAGAACTTCTTTTCTTTTTTCTTTTTAAATTTTTGGTTATAGGTTATAATTTATTATTCTGTTTGGGGTGCATTTATCAGCATTGTCCCTGTTTAGAATGATAGCTTAGCTTCAATCTTCCAAAGCAATGGTGCTTCCTTTACAGTAGGCAATTTTGTAATATTATTTGCCTTGTTATTTGGTGGCTTCATCATCTCACATCATAAGTTTTCTTAATAACTAAGGTCTTTGTTAGATTAAGATTTCATTATTTAAAACTACGTACGTTTCATTTCTCCCGCAGTATGATATTAAAGCATCATAGAGAGAGTTTGATTTTCAATTTTTTGAATTATGCAACATCCATGCTAGCTTGGTTGAATTGGGGTTTTTGGGTTTCACCTATAAGTTATGGAGAAATTGGCATTTCTCTTAATGAATTAAATTGTTTATGTGCAGTTTATTACTTACACCACTTGCCAATCGCAGATGGATGGGTAAGAACTCTTTCCTCTCTTGATCATATTGAACTAATATCTGTTGTCTTTTATTTATTGACCATCTTGTTAAACCAAATCCTGACATGATAGGGGCATTTATAAAATTTAGAAAGCCTTTGTAGGTTTCTTGTAATTTGGTTGTAAACACCTTTGTTTCAATCGAACAGTTTTACTGACAAAGTTGCATTGCATTATGGTTTTATTTATTTCCTTCAGCTAGGGCCTCCCTCTTATTTCCCTTATAAATGACACATTTCATGTGCTTTTTTCTGCCTTGGCATTCATAAGCATCATCTTTCTCTTAAGAATTTGTTTACCCTGAAAACAAAACCAACAAAAAGGTTATAGCAGAAAAATGAACATAGGATTCATGAATTTGTGTTTATAAATCTAGGATGAATTCTCAATAGGTACACAAAAATACTGTAGAAATTGCATTCTTACATCGCCTTCGATGCTTGGAATATGTTTCATCTTTAGTGAAGACAAAAAGTGTCCATAAGATCTATGGATTGGAACAATATCTTTGTACGTACCACTACAACTTTGATTTCTATTTTCTCCCATGCAGAAGAGAGAGACTCGTTTAGAAATGGTTGGAAACGTTTTTCGAAAAATTTCAATGTGGATTAGCATAATTTAGTACTCTTGATCTGAAATTTACTTCACAATACATGTGCATATAAGTCCCAAATAAATAAGTGTTGAGTGTTGTGGAAGTTTTGTAACTTGTTTTATATAATTCTTTTAGATATCATGATTGCACTTGTGGAAATTCTGCATTTTTTGTGACATAGTTTGAGAAATTACATCTTTTTTGACTCATCCCTTATAAAATGTATTATTGCTTCTTCTCTAGGTACCAAGGTATATTCTTCTATGTTATGTTTACCTTCATTTGTAGTTTCTTTAGTTTTATTTTTCTTATGCCATTGCTTTTCTATATGTAGTTTCTTTAGTCTTTGAATTAGAAGTTAAAGTTCTTAGTTTTAATGCTATTCTTATTTTGTTTGTAGATTTCAAGGAGTTGAAGATAACAATTAGTGAAATTTTGATCAGTTTGGAGTTATCCCAAGAGTGTTGTGGTTCTTGGAGGAGGGTGATGACTCTATTTCTTATTATTACATATACTCATGTTTTATGATTAAGAACGATGTTCTATTTTCTATCTATGTGCTATATGAGACGAGATTTGTGACTAATTAGAAATATATCCACTATTGATTTTTCTATTTTCTGAATAGGTTTGTATCTCGTTTTGTATTCTTTGTAGGATGAACTCATCACTTGGTGATTAGGCTTCAAGTTAATATTGTTGAACAATGTTTAATGACATTAGCTATGAAGTATTTGTATAGTTGGGAAGTCTTGGTAACTATCATGAGAACTTTTCATAGCTTGCTTCTAATATTTCTCTCTTGAAAGCATATTCTCATTTATAAAATTTGATCTCTTGTGTGCTCTTGGGAGTCATTTGTTTATCTAACACGTCAAGAAAGCATACAAGCAAATTCCTTTGAATATGTGTTATGTAACTATCTGTAGGTAAAGTCCTTTTCTCAACTAAACTATAGGTTACTTTATGATGTGAATTGCCTTTAGTTCTTTTTAAAAGTATTATGTGTTGTATTTAAAGTTCTTGCATTTAGAACGGTTATATTTGCTGCCTTGGTTTGATATCAAACTCATACAAACACTTTGAGCTAGGCTGAGAAGCAAAGAAACAAGGTTAACTTTATGATGTGAATTACCTTTAAACATCTTTTTTCTAGTGTATCATTATGATAAATCTATCCGTTTTTTTTTTTTTTTTTTTTTTGGAGATTTAGAATGATTTTGACCACATGGTTATATTGGTACAATATGTAGTTTATTGAAATAGGACTTGAAGGAGATGCCAATTCTGACGGTGAAGAAGATGAAATGGAGGACACTGATGATGTAGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATTCGATTGATTTACTATAGCGATGAAGCTACCAAGCAAGTGATTGACGTTTGATTCTGTTGGAATTTTTTGTACTAAAACTCATAGTTTGTAAATCATATTCTGTTCAATAAAGTTGTTATTGAGAAATTAAATATTATAATCTTAAATCCAATAAATCAAGTTTCAAGGCTATTTTTG

mRNA sequence

ATGACAACCAGCGGCAACCCACTACCTCTCCCCTTCTATTTCATCCTACTCGTTCAGAATCTCAGTTCAGAATCTCGGTACGTAGTGGAAGACTCCGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGAATGGACATTGATGTTGAAGATGACAATTACTTCATGGTAGCCTTTTTTTTTGCTCTCATTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCCTGGGCCTATCTATGCTATTCCAGCTTAATCAAGATCCCACTTTCCCTCGGCGAATCCTTAGTTTGGACTTCTCTTACTCACTACGTCATTGGCTTCACCCCTCAACCTATCAGTTTATTACTTACACCACTTGCCAATCGCAGATGGATGGGTAAGAACTCTTTCCTCTCTTGATCATATTGAACTAATATCTGTTGTCTTTTATTTATTGACCATCTTGTTAAACCAAATCCTGACATGATAGGGGCATTTATAAAATTTAGAAAGCCTTTGTAGGTTTCTTGTAATTTGGTTGTAAACACCTTTGTTTCAATCGAACAGTTTTACTGACAAAGTTGCATTGCATTATGGTTTTATTTATTTCCTTCAGCTAGGGCCTCCCTCTTATTTCCCTTATAAATGACACATTTCATGTGCTTTTTTCTGCCTTGGCATTCATAAGCATCATCTTTCTCTTAAGAATTTGTTTACCCTGAAAACAAAACCAACAAAAAGGTTATAGCAGAAAAATGAACATAGGATTCATGAATTTGTGTTTATAAATCTAGGATGAATTCTCAATAGGTACACAAAAATACTGTAGAAATTGCATTCTTACATCGCCTTCGATGCTTGGAATATGTTTCATCTTTAGTGAAGACAAAAAGTGTCCATAAGATCTATGGATTGGAACAATATCTTTGTACGTACCACTACAACTTTGATTTCTATTTTCTCCCATGCAGAAGAGAGAGACTCGTTTAGAAATGGTTGGAAACGTTTTTCGAAAAATTTCAATGTGGATTAGCATAATTTAGTACTCTTGATCTGAAATTTACTTCACAATACATGTGCATATAAGTCCCAAATAAATAAGTGTTGAGTGTTGTGGAAGTTTTGTAACTTGTTTTATATAATTCTTTTAGATATCATGATTGCACTTGTGGAAATTCTGCATTTTTTGTGACATAGTTTGAGAAATTACATCTTTTTTGACTCATCCCTTATAAAATGTATTATTGCTTCTTCTCTAGGTACCAAGGTATATTCTTCTATGTTATGTTTACCTTCATTTGTAGTTTCTTTAGTTTTATTTTTCTTATGCCATTGCTTTTCTATATGTAGTTTCTTTAGTCTTTGAATTAGAAGTTAAAGTTCTTAGTTTTAATGCTATTCTTATTTTGTTTGTAGATTTCAAGGAGTTGAAGATAACAATTAGTGAAATTTTGATCAGTTTGGAGTTATCCCAAGAGTGTTGTGGTTCTTGGAGGAGGTTTATTGAAATAGGACTTGAAGGAGATGCCAATTCTGACGGTGAAGAAGATGAAATGGAGGACACTGATGATGTAGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATTCGATTGATTTACTATAGCGATGAAGCTACCAAGCAAGTGATTGACGTTTGATTCTGTTGGAATTTTTTGTACTAAAACTCATAGTTTGTAAATCATATTCTGTTCAATAAAGTTGTTATTGAGAAATTAAATATTATAATCTTAAATCCAATAAATCAAGTTTCAAGGCTATTTTTG

Coding sequence (CDS)

ATGACAACCAGCGGCAACCCACTACCTCTCCCCTTCTATTTCATCCTACTCGTTCAGAATCTCAGTTCAGAATCTCGGTACGTAGTGGAAGACTCCGTGGAAGGCTCCGCACGGTTTCGATCTCGAAGAAAAAGAATGGACATTGATGTTGAAGATGACAATTACTTCATGGTAGCCTTTTTTTTTGCTCTCATTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCCTGGGCCTATCTATGCTATTCCAGCTTAATCAAGATCCCACTTTCCCTCGGCGAATCCTTAGTTTGGACTTCTCTTACTCACTACGTCATTGGCTTCACCCCTCAACCTATCAGTTTATTACTTACACCACTTGCCAATCGCAGATGGATGGGTAAGAACTCTTTCCTCTCTTGA

Protein sequence

MTTSGNPLPLPFYFILLVQNLSSESRYVVEDSVEGSARFRSRRKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSLIKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS

Homology

[Close]

BLAST of CsGy1G015710 vs. NCBI nr
Match: KGN65068.1 (hypothetical protein Csa_1G190180 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 46  MDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL 105
           MDIDVEDDNYFMVA FFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL
Sbjct: 1   MDIDVEDDNYFMVALFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL 60

Query: 106 IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS 154
           IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS
Sbjct: 61  IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS 108

[Close]

BLAST of CsGy1G015710 vs. NCBI nr
Match: XP_011652141.1 (PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis sativus] >KGN59365.1 hypothetical protein Csa_3G814320 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 2.5e-33
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQFYFYPAWAY   
Sbjct: 564 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQFYFYPAWAYAIP 623

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ESLVWTSLT+YVIGFTPQPI
Sbjct: 624 AAILKIPLSLVESLVWTSLTYYVIGFTPQPI 654

[Close]

BLAST of CsGy1G015710 vs. NCBI nr
Match: XP_008443150.1 (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAY   
Sbjct: 570 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAIP 629

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ES+VWTSLT+YVIGF PQP+
Sbjct: 630 AAILKIPLSLLESIVWTSLTYYVIGFAPQPV 660

[Close]

BLAST of CsGy1G015710 vs. NCBI nr
Match: XP_008443151.1 (PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAY   
Sbjct: 384 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAIP 443

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ES+VWTSLT+YVIGF PQP+
Sbjct: 444 AAILKIPLSLLESIVWTSLTYYVIGFAPQPV 474

[Close]

BLAST of CsGy1G015710 vs. NCBI nr
Match: XP_004140460.1 (PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 7.2e-28
Identity = 63/89 (70.79%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM +D+E  NY+M A FFAL+LLLVDGFPEL M IQR+EVFYKQK+FYFYPAWAY+  
Sbjct: 561 RTRMGVDLEHSNYYMGALFFALLLLLVDGFPELAMTIQRLEVFYKQKEFYFYPAWAYVIP 620

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           ++++KIPLSL  SLVWTSLT+YVIG+TP+
Sbjct: 621 AAILKIPLSLLGSLVWTSLTYYVIGYTPE 649

[Close]

BLAST of CsGy1G015710 vs. TAIR10
Match: AT2G37280.1 (pleiotropic drug resistance 5)

HSP 1 Score: 117.9 bits (294), Expect = 5.6e-27
Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RMDID+   N +M   FFA ++LLVDG PEL M +QR+ VFYKQKQ  FYPAWAY   
Sbjct: 530 RTRMDIDIIHGNSYMSCLFFATVVLLVDGIPELSMTVQRLSVFYKQKQLCFYPAWAYAIP 589

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQP 133
           ++++KIPLS  ESLVWT LT+YVIG+TP+P
Sbjct: 590 ATVLKIPLSFFESLVWTCLTYYVIGYTPEP 619

[Close]

BLAST of CsGy1G015710 vs. TAIR10
Match: AT3G53480.1 (pleiotropic drug resistance 9)

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-26
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM ID+   N +M A FFALI+LLVDGFPEL M  QR+ VFYKQKQ  FYPAWAY   
Sbjct: 565 RTRMGIDIIHGNSYMSALFFALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIP 624

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           ++++K+PLS  ESLVWT L++YVIG+TP+
Sbjct: 625 ATVLKVPLSFFESLVWTCLSYYVIGYTPE 653

[Close]

BLAST of CsGy1G015710 vs. TAIR10
Match: AT4G15236.1 (ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 43/78 (55.13%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 54  NYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSLIKIPLSLG 113
           NY + + FF+LI LL DG PEL + + R+ VF KQK+ YFYPAWAY   S+++KIP+S  
Sbjct: 538 NYLLGSLFFSLIKLLADGLPELTLTVSRIAVFCKQKELYFYPAWAYAIPSAILKIPISFL 597

Query: 114 ESLVWTSLTHYVIGFTPQ 132
           ES +WT LT+YVIG++P+
Sbjct: 598 ESFLWTMLTYYVIGYSPE 615

[Close]

BLAST of CsGy1G015710 vs. TAIR10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 54  NYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSLIKIPLSLG 113
           NY M + FF+L  LL DG PEL + I R+ VF KQK+ YFYPAWAY   S+++KIP+S  
Sbjct: 542 NYLMGSLFFSLFKLLADGLPELTLTISRIAVFCKQKELYFYPAWAYAIPSAILKIPISFL 601

Query: 114 ESLVWTSLTHYVIGFTPQ 132
           ES +WT LT+YVIG++P+
Sbjct: 602 ESFLWTMLTYYVIGYSPE 619

[Close]

BLAST of CsGy1G015710 vs. TAIR10
Match: AT4G15215.1 (pleiotropic drug resistance 13)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-19
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 49  DVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSLIKI 108
           D    NY M + F AL  LL DG PEL + I R+ VF KQK  YFYPAWAY   S +++I
Sbjct: 528 DARHGNYLMGSMFTALFRLLADGLPELTLTISRLGVFCKQKDLYFYPAWAYAIPSIILRI 587

Query: 109 PLSLGESLVWTSLTHYVIGFTPQ 132
           PLS+ +S +WT LT+YVIG++P+
Sbjct: 588 PLSVLDSFIWTVLTYYVIGYSPE 610

[Close]

BLAST of CsGy1G015710 vs. Swiss-Prot
Match: sp|Q9ZUT8|AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RMDID+   N +M   FFA ++LLVDG PEL M +QR+ VFYKQKQ  FYPAWAY   
Sbjct: 530 RTRMDIDIIHGNSYMSCLFFATVVLLVDGIPELSMTVQRLSVFYKQKQLCFYPAWAYAIP 589

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQP 133
           ++++KIPLS  ESLVWT LT+YVIG+TP+P
Sbjct: 590 ATVLKIPLSFFESLVWTCLTYYVIGYTPEP 619

[Close]

BLAST of CsGy1G015710 vs. Swiss-Prot
Match: sp|Q9LFH0|AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.6e-25
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM ID+   N +M A FFALI+LLVDGFPEL M  QR+ VFYKQKQ  FYPAWAY   
Sbjct: 565 RTRMGIDIIHGNSYMSALFFALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIP 624

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           ++++K+PLS  ESLVWT L++YVIG+TP+
Sbjct: 625 ATVLKVPLSFFESLVWTCLSYYVIGYTPE 653

[Close]

BLAST of CsGy1G015710 vs. Swiss-Prot
Match: sp|Q5W274|PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RMD D+   NY++ A F+ALI+LLVDGFPEL M I R+ VFYKQ +  FYPAWAY   
Sbjct: 563 RTRMDTDLVHANYYLGALFYALIILLVDGFPELSMTITRLAVFYKQSELCFYPAWAYTIP 622

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           ++++KIPLSL ES++W S+T+YVIGF+P+
Sbjct: 623 ATILKIPLSLLESVIWASMTYYVIGFSPE 651

[Close]

BLAST of CsGy1G015710 vs. Swiss-Prot
Match: sp|Q8GU83|AB41G_ORYSJ (ABC transporter G family member 41 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG41 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 50/89 (56.18%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R  M +D    +Y+M + F+ALILLLV+GFPEL +A+ R+ VFYKQ+ +YFYPAWAY   
Sbjct: 550 RTHMGVDRAHADYYMGSLFYALILLLVNGFPELAIAVSRLPVFYKQRDYYFYPAWAYAIP 609

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           S ++KIPLSL ES+ WTS+++Y+IG+TP+
Sbjct: 610 SFILKIPLSLVESITWTSISYYLIGYTPE 638

[Close]

BLAST of CsGy1G015710 vs. Swiss-Prot
Match: sp|Q2QV81|AB49G_ORYSJ (ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG49 PE=2 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 8.3e-20
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 33  VEGSARFRSRRKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFY 92
           + G+  FR+ +   + D+   NY+M + F+ALILL+V+G PELVM+I R+ VFYK +  Y
Sbjct: 596 ITGTVFFRTHK---NFDIVSANYYMGSLFYALILLMVNGIPELVMSISRLPVFYKHRDHY 655

Query: 93  FYPAWAYLCYSSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
            YP WAY   + ++KIP SL  +L WTS+++Y+IG+TP+
Sbjct: 656 LYPGWAYAIPAFILKIPASLVAALSWTSISYYLIGYTPE 691

[Close]

BLAST of CsGy1G015710 vs. TrEMBL
Match: tr|A0A0A0LTH3|A0A0A0LTH3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G190180 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-53
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 46  MDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL 105
           MDIDVEDDNYFMVA FFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL
Sbjct: 1   MDIDVEDDNYFMVALFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL 60

Query: 106 IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS 154
           IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS
Sbjct: 61  IKIPLSLGESLVWTSLTHYVIGFTPQPISLLLTPLANRRWMGKNSFLS 108

[Close]

BLAST of CsGy1G015710 vs. TrEMBL
Match: tr|A0A0A0LBH1|A0A0A0LBH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-33
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQFYFYPAWAY   
Sbjct: 564 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQFYFYPAWAYAIP 623

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ESLVWTSLT+YVIGFTPQPI
Sbjct: 624 AAILKIPLSLVESLVWTSLTYYVIGFTPQPI 654

[Close]

BLAST of CsGy1G015710 vs. TrEMBL
Match: tr|A0A1S3B6X0|A0A1S3B6X0_CUCME (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.2e-32
Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAY   
Sbjct: 570 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAIP 629

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ES+VWTSLT+YVIGF PQP+
Sbjct: 630 AAILKIPLSLLESIVWTSLTYYVIGFAPQPV 660

[Close]

BLAST of CsGy1G015710 vs. TrEMBL
Match: tr|A0A1S3B7C4|A0A1S3B7C4_CUCME (pleiotropic drug resistance protein 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.2e-32
Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM+ID+ED NYFM A FFALILLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAY   
Sbjct: 384 RTRMEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAIP 443

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQPI 134
           ++++KIPLSL ES+VWTSLT+YVIGF PQP+
Sbjct: 444 AAILKIPLSLLESIVWTSLTYYVIGFAPQPV 474

[Close]

BLAST of CsGy1G015710 vs. TrEMBL
Match: tr|A0A0A0KMI3|A0A0A0KMI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28
Identity = 63/89 (70.79%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 43  RKRMDIDVEDDNYFMVAFFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCY 102
           R RM +D+E  NY+M A FFAL+LLLVDGFPEL M IQR+EVFYKQK+FYFYPAWAY+  
Sbjct: 561 RTRMGVDLEHSNYYMGALFFALLLLLVDGFPELAMTIQRLEVFYKQKEFYFYPAWAYVIP 620

Query: 103 SSLIKIPLSLGESLVWTSLTHYVIGFTPQ 132
           ++++KIPLSL  SLVWTSLT+YVIG+TP+
Sbjct: 621 AAILKIPLSLLGSLVWTSLTYYVIGYTPE 649

The following BLAST results are available for this feature:

BLAST of CsGy1G015710 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65068.1	3.8e-53	99.07	hypothetical protein Csa_1G190180 [Cucumis sativus]	[more]
XP_011652141.1	2.5e-33	81.32	PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis sativus] >KGN5936...	[more]
XP_008443150.1	1.4e-31	76.92	PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]	[more]
XP_008443151.1	1.4e-31	76.92	PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo]	[more]
XP_004140460.1	7.2e-28	70.79	PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus]	[more]

BLAST of CsGy1G015710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37280.1	5.6e-27	62.22	pleiotropic drug resistance 5	[more]
AT3G53480.1	4.8e-26	62.92	pleiotropic drug resistance 9	[more]
AT4G15236.1	1.3e-20	55.13	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15233.2	1.3e-20	56.41	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15215.1	1.9e-19	53.01	pleiotropic drug resistance 13	[more]

BLAST of CsGy1G015710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUT8\|AB33G_ARATH	1.0e-25	62.22	ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=...	[more]
sp\|Q9LFH0\|AB37G_ARATH	8.6e-25	62.92	ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=...	[more]
sp\|Q5W274\|PDR3_TOBAC	3.3e-24	59.55	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 ...	[more]
sp\|Q8GU83\|AB41G_ORYSJ	2.1e-23	56.18	ABC transporter G family member 41 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
sp\|Q2QV81\|AB49G_ORYSJ	8.3e-20	46.46	ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]

BLAST of CsGy1G015710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTH3\|A0A0A0LTH3_CUCSA	2.5e-53	99.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G190180 PE=4 SV=1	[more]
tr\|A0A0A0LBH1\|A0A0A0LBH1_CUCSA	1.7e-33	81.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1	[more]
tr\|A0A1S3B6X0\|A0A1S3B6X0_CUCME	9.2e-32	76.92	pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S3B7C4\|A0A1S3B7C4_CUCME	9.2e-32	76.92	pleiotropic drug resistance protein 3-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0KMI3\|A0A0A0KMI3_CUCSA	4.7e-28	70.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR013525	ABC_2_trans

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G015710.1	CsGy1G015710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013525	ABC-2 type transporter	PFAM	PF01061	ABC2_membrane	coord: 50..137 e-value: 1.5E-9 score: 37.5
None	No IPR available	PANTHER	PTHR19241:SF259	ABC TRANSPORTER G FAMILY MEMBER 33-RELATED	coord: 43..132
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 43..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G015710	Csa1G190180	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G015710	CsaV3_1G017290	Cucumber (Chinese Long) v3	cgybcucB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G015710	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G015710	Wild cucumber (PI 183967)	cgybcpiB038
CsGy1G015710	Silver-seed gourd	carcgybB0408
CsGy1G015710	Silver-seed gourd	carcgybB1020
CsGy1G015710	Cucumber (Chinese Long) v3	cgybcucB046
CsGy1G015710	Watermelon (97103) v2	cgybwmbB006
CsGy1G015710	Watermelon (97103) v2	cgybwmbB009
CsGy1G015710	Wax gourd	cgybwgoB032
CsGy1G015710	Wax gourd	cgybwgoB042
CsGy1G015710	Wax gourd	cgybwgoB056
CsGy1G015710	Cucumber (Gy14) v2	cgybcgybB036
CsGy1G015710	Cucurbita maxima (Rimu)	cgybcmaB068
CsGy1G015710	Cucurbita maxima (Rimu)	cgybcmaB095
CsGy1G015710	Cucurbita maxima (Rimu)	cgybcmaB128
CsGy1G015710	Cucurbita moschata (Rifu)	cgybcmoB065
CsGy1G015710	Cucurbita moschata (Rifu)	cgybcmoB084
CsGy1G015710	Cucurbita moschata (Rifu)	cgybcmoB118
CsGy1G015710	Cucurbita pepo (Zucchini)	cgybcpeB007
CsGy1G015710	Cucurbita pepo (Zucchini)	cgybcpeB024
CsGy1G015710	Cucurbita pepo (Zucchini)	cgybcpeB087
CsGy1G015710	Cucumber (Chinese Long) v2	cgybcuB041
CsGy1G015710	Bottle gourd (USVL1VR-Ls)	cgyblsiB016
CsGy1G015710	Bottle gourd (USVL1VR-Ls)	cgyblsiB029
CsGy1G015710	Melon (DHL92) v3.5.1	cgybmeB017
CsGy1G015710	Melon (DHL92) v3.6.1	cgybmedB014
CsGy1G015710	Watermelon (97103) v1	cgybwmB051
CsGy1G015710	Watermelon (Charleston Gray)	cgybwcgB018
CsGy1G015710	Watermelon (Charleston Gray)	cgybwcgB021
CsGy1G015710	Watermelon (97103) v1	cgybwmB048