CsGy1G015370 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCTCTTCACCGCCGACCACCGGATACCCACCTCCGACAACTTCCCTCAGCACGTTGCTCCATTTCCCGATCCCACCGACCTCCTCTACGCTGCTCCATCCTCTGTATTTCCCCCTACCGACATCATCAACCACCTCTCCAACCCTCCACCGCCGCCTCAGAAGCTCCGTCCCATCCGCTGCAACGGTAGGTCCCCTGCCGGTTCTCAGGCCGAAAACATCTTCGATGGAGCCCTAAGGAGTTTCCAATGCGTTTCTTCCTCGCCTGAGGGTGGTTTTTCTGGGGATCAGCTCTGTGTGGCTAATATTGACCCTTGTCAGTACTTCAACTCCTCTGCAAAAGATGAAAAGCCTGAAGTCAAGCATAATGGCAGCTTCGGCGATATCATTGCAAACGATTACTTCTCCGAGGAAGAGACGAAGAACGGCGGATCCGGTGCTGCTATTGCTGCGGAGAATTTGAGCCGGAGCCGTGAAGAACCTCAATTGGACGACGATTCGTGGTGA ATGGACCTCTTCACCGCCGACCACCGGATACCCACCTCCGACAACTTCCCTCAGCACGTTGCTCCATTTCCCGATCCCACCGACCTCCTCTACGCTGCTCCATCCTCTGTATTTCCCCCTACCGACATCATCAACCACCTCTCCAACCCTCCACCGCCGCCTCAGAAGCTCCGTCCCATCCGCTGCAACGGTAGGTCCCCTGCCGGTTCTCAGGCCGAAAACATCTTCGATGGAGCCCTAAGGAGTTTCCAATGCGTTTCTTCCTCGCCTGAGGGTGGTTTTTCTGGGGATCAGCTCTGTGTGGCTAATATTGACCCTTGTCAGTACTTCAACTCCTCTGCAAAAGATGAAAAGCCTGAAGTCAAGCATAATGGCAGCTTCGGCGATATCATTGCAAACGATTACTTCTCCGAGGAAGAGACGAAGAACGGCGGATCCGGTGCTGCTATTGCTGCGGAGAATTTGAGCCGGAGCCGTGAAGAACCTCAATTGGACGACGATTCGTGGTGA ATGGACCTCTTCACCGCCGACCACCGGATACCCACCTCCGACAACTTCCCTCAGCACGTTGCTCCATTTCCCGATCCCACCGACCTCCTCTACGCTGCTCCATCCTCTGTATTTCCCCCTACCGACATCATCAACCACCTCTCCAACCCTCCACCGCCGCCTCAGAAGCTCCGTCCCATCCGCTGCAACGGTAGGTCCCCTGCCGGTTCTCAGGCCGAAAACATCTTCGATGGAGCCCTAAGGAGTTTCCAATGCGTTTCTTCCTCGCCTGAGGGTGGTTTTTCTGGGGATCAGCTCTGTGTGGCTAATATTGACCCTTGTCAGTACTTCAACTCCTCTGCAAAAGATGAAAAGCCTGAAGTCAAGCATAATGGCAGCTTCGGCGATATCATTGCAAACGATTACTTCTCCGAGGAAGAGACGAAGAACGGCGGATCCGGTGCTGCTATTGCTGCGGAGAATTTGAGCCGGAGCCGTGAAGAACCTCAATTGGACGACGATTCGTGGTGA MDLFTADHRIPTSDNFPQHVAPFPDPTDLLYAAPSSVFPPTDIINHLSNPPPPPQKLRPIRCNGRSPAGSQAENIFDGALRSFQCVSSSPEGGFSGDQLCVANIDPCQYFNSSAKDEKPEVKHNGSFGDIIANDYFSEEETKNGGSGAAIAAENLSRSREEPQLDDDSW
BLAST of CsGy1G015370 vs. NCBI nr
Match: XP_004139609.1 (PREDICTED: trihelix transcription factor GT-2 [Cucumis sativus] >KGN65026.1 hypothetical protein Csa_1G181390 [Cucumis sativus]) HSP 1 Score: 344.0 bits (881), Expect = 3.0e-91 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsGy1G015370 vs. NCBI nr
Match: XP_008463656.1 (PREDICTED: trihelix transcription factor GT-2, partial [Cucumis melo]) HSP 1 Score: 340.1 bits (871), Expect = 4.3e-90 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsGy1G015370 vs. NCBI nr
Match: XP_023001568.1 (trihelix transcription factor GTL1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 3.2e-77 Identity = 144/168 (85.71%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of CsGy1G015370 vs. NCBI nr
Match: XP_023001567.1 (trihelix transcription factor GT-2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 3.2e-77 Identity = 144/168 (85.71%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of CsGy1G015370 vs. NCBI nr
Match: XP_022927336.1 (trihelix transcription factor GTL1 isoform X2 [Cucurbita moschata]) HSP 1 Score: 295.4 bits (755), Expect = 1.2e-76 Identity = 143/168 (85.12%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of CsGy1G015370 vs. TrEMBL
Match: tr|A0A0A0LYK7|A0A0A0LYK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181390 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsGy1G015370 vs. TrEMBL
Match: tr|A0A1S3CJS0|A0A1S3CJS0_CUCME (trihelix transcription factor GT-2 OS=Cucumis melo OX=3656 GN=LOC103501749 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.8e-90 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of CsGy1G015370 vs. TrEMBL
Match: tr|W9QZA6|W9QZA6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010615 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CsGy1G015370 vs. TrEMBL
Match: tr|A0A067L8R1|A0A067L8R1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01336 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12 Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of CsGy1G015370 vs. TrEMBL
Match: tr|A0A2C9VME6|A0A2C9VME6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G124500 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11 Identity = 56/153 (36.60%), Postives = 77/153 (50.33%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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