CmaCh13G003880 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAAAAGAATAAGGGTAATAACGTAATTGCGTATTTCCATTTAACCTTTTTACTTCAATTTACTTGGTCAATTTCACCCACCGAAAACCCTCCTCGCCGCCAAAATTTTACCACTTTTCAACCGCCGCAGGATGGACCTCTTCACCGGCGATCACCGGATTCCGAGCTCCGACAGCTTCCCACAGCACGTTGCTCCATTTCCCGATTCGACGGACCTCCTCTACGCTGCTCCTTCTGCCGTATTTCCCTCTGCCGACATCATCGCCCACCTACCAAACCCTCCGCCGCCGCCGCAGAAGCTCCGTCCTATCCGCTGCAACGGTAGGTCCCCGGCGGGTTCTCAGGCCGATAACATCTTCGACGGTGCTCTAAGGAGTTTCCAATGTGTTTCGTCGTCACCAGAGGGTGGATTTTCTGGCGATCAGCTCTGTGTGGCTAATATTGACCCTTGCCAGTACTTCAATTCCTCTGAGAAAGATGATAAGCCCGACGCCAAGGATAATGGCGGCTTCAGCGATATCATCGGAAACAATTTCTTCTCGGAGGAAGAGACGAAGAACGGTGGTACAGATGCTGCCATCGCTGCGGAGAATTTGAGCCGGAGCCTTGAAGGACCGCAATTGGACGACGATTCGTGGTGAGTTTGAACTCTGAACTGAATATCGCCTCACGAATTGGGGTTTTTGTTCTTCAATTTAACAATTGAAGTTTATTTACTTTAATTACACACGAACACACACACACACACACACACACACAACACACATAGGTGCTTTGAATTTGTTTAGGAAATGCAAACTACTTTATGAATTCTCATAGAAAAGTGATACGATCAAAGAAAAGCTTCCCTGGAAAGTGATCCTTATAAAATATGAAAAAGAAATTGTTCTTTCAGTTTGGTGTTTCTTGATCTCTCTTCATTCAAAGTTGGTTTTATTTCTTTCAATTCTCAATTCTTCAGAAAAAAACTAGAAAAGTTAAAGATGAATCTTGTATAATTTCCAATTTTATCATTATTAAATGAGATGAAAAAAAGAGAAACAAACAGGATATTCCCAAAAATATCCCACTGGAATTAATAAGAACAGGGAGTAGGTAAGTTTACAAAACCCTTTTAGGAGAGTGCACCAATTTGAAGTAGCAAAATGACAAGGTCAACAGAGCCATAAAAGATTCTTCTTTTTTCTCTCCTTTTTTAAAGTTCCCATCACTAGCAACCATCATATTGTCCTAGAAAATACTAACTTTTTGAAGGAAAGAGAAGAGATTGTGCCATGAAATGGTTTTGTACAAAAGATTGTGCCACGAAACTAAGACGACAATCAGAAAGAAGAGGTGAGGGGAGGAAGAAACATTATACATTTTGAAACTGATTGGCTTTCGATTTCGACACTGTTCTTCATTTGTATGGTATTGGATATAGAATCTAGAAGTGCAAGAATTCTGTTCTTCATTTCAAAACTGATTGGCTTTCGATTTCGAAACTGTTCTTCATTTGTATGGTATTGGATGTAGAATCTAGAAGTGCAAGAAGTCTGTTCTTCATTTCGAAACTGATTGGCTTTCGATTCTTGAAAATTAAAATCATGTGAATTCTTTTGTGTTTCTGATACAATTAGTATGGTTAGTCATGGATTTCTTTTTGTTGTGGTCATCTGCTGAATCTGTGACAATGGGTTTAGGATAGAAGGAATTGAATAGGAAGTTCTTGTTCTGATATGTTGATTTATGCCATTGCAGTAATTTGATACTCATCCCATTTTTAGGACTTCTTCTTTTATATTACTTTTTTTCCTTTCTGAAAATGAAACCGAAATTTTCATTGATAATGAAGAAGTTTCGAAAAAGAGGAGAAAAGGCAGATAAAGGAATCCAAACCTGCTTCTTGATCGTCAATCTTTCCCATTTACATGTAACACTATCATTCTTTATGTAGTTAAGCTCAGAAATGAGACTATTTACCTCCTTTTCGTCCTGCAACTAGAAACGGGTTTGTTCGATTATTCAATCAGCCTGTTTCAGACTGAATCTTTCATCTGATGATCGACATTTACCCCTCTCGAACTTGGAAGTTTGACTAAGCATTTCAAAATTTTTAGCTTTCTTTCGTGGCGGAAGGTATCCTCCTCTTTCCCGACACCCTTATCCTTAAAGTCTGCGTAAAATCTGCAAATTCCTTCTCATGGGTGCTTGTTCTATTATTGAAACTGAAAGCAAGCTAAAAGAAAGTTGGTTTATGGAATTCCTTGCCTTTAATTGTTTAATATTGTAATACATACACAGCAGCTTCTGTTATCTTGATTGAAGTTTTATCAGATCAAATAAGTAGAAATCCCAGCATGATACATGCATAGATACATAGATATATACTTTTTATGATGAACATAGGTAGATAGATATATATAGCTGTGCTCGATAATATATGACCAACTCTAAATTACTTGATTACTTGTTTCCAGCTCCACTTCAGATGGCGGTGATGACGTTTTAAGCACAAAAAAACATTTAAACCATAAGAGAAAGCGAACGACAAGATCGCTTGAGCTTTTCGTGGAAAATTTGATAATGAAGGTAATGAATAAACAGGAGGAGATGCATAGGCAGTTGATAGACATGATAGAAAAGAATGAGAAAGAGAGAATAGTCAGAGAAGAAGCTTGGAAACAGAGGGAGATCGAAAGAATGAGAAGAGACGAGGAGTTGAGAGCCCAAGAAACGTCTCGCAGCTTAGCAATTATCTCCTTCATCCAAAATCTGCTAGGCCATGAAATTCAAATCTCACAACCAGTCGAAAACCACTGTACAGAAGACGATGGAGGTGAAAGCAGCATACAGAAGGAGCTAAAAAGCGATCCAAGTAGTAGAAGATGGCCTCGAGCTGAAGTACAATCTTTGATATCACTTCGAACTTCGCTAGAACATAAATTCCGTGCTACAGGCTCGAAAGGTTCTATATGGGAGGAGATATCAGTCGAGATGCAGAAGGTCGGTTACAACCGTTCGGCAAAGAAATGCAAAGAAAAATGGGAAAATATGAACAAGTATTTCAAAAGAACAATAGGAACTGGGAAAGCTAGTATTGCAAACGGTAAGACATGCCCATATTTTCAAGAATTAGATACTCTTTATAGAAATGGAGTAGTAAATTCAGGAGCTGTCATTGATAGTACAAGCACTGAACATAATTCACAGGCTGAAAGAAGTATAGACCCCTTTCATGAAGATGAGGCCTTTGTACAAGGTGAAAGTGAAAGAGAGCATGTAAAACAGGAGGCCTTGGAGATGACACAATTTTAAAGAGATTTACGTGTACACTACCGATCCGTTCGGTCGATTTTTGCAGCCCAGCTTTCGGATAACGCAGGTTCTTCCTGCTTCCGGCTGATCTATTCATGGCTGCTTTCCTGGTCGGCTCGTTTTTTCAGATTTTAAACTCGTGTATGTTTCAGTATTTGTGCCTCTATAGTGACCAAAAGAAATGCCATGTTTTCAGTTGGACGTTAGCAGGAAATGATGGCAGTAGATTGAAGAATCACAACGCTTGAATCAAGTTTTGGGATGTGGCGATGATGCTAAGTAAATGGATAACAGTTGTAAACATATCAAACTTTATTCTTATGGATTTGTTTAGATTTACTGTTTAAATTTTCGGTTAGTTTGTAATGAGAAATACGTTGATATCGATTTGCTATGTTACGTTGATATCGATTCGCTATGTTATGCTATGTTACGTTGATATCGATTCGCTATGTTATGCTATGTTACGTTGATATCGAT TTGAAAAAGAATAAGGGTAATAACGTAATTGCGTATTTCCATTTAACCTTTTTACTTCAATTTACTTGGTCAATTTCACCCACCGAAAACCCTCCTCGCCGCCAAAATTTTACCACTTTTCAACCGCCGCAGGATGGACCTCTTCACCGGCGATCACCGGATTCCGAGCTCCGACAGCTTCCCACAGCACGTTGCTCCATTTCCCGATTCGACGGACCTCCTCTACGCTGCTCCTTCTGCCGTATTTCCCTCTGCCGACATCATCGCCCACCTACCAAACCCTCCGCCGCCGCCGCAGAAGCTCCGTCCTATCCGCTGCAACGGTAGGTCCCCGGCGGGTTCTCAGGCCGATAACATCTTCGACGGTGCTCTAAGGAGTTTCCAATGTGTTTCGTCGTCACCAGAGGGTGGATTTTCTGGCGATCAGCTCTGTGTGGCTAATATTGACCCTTGCCAGTACTTCAATTCCTCTGAGAAAGATGATAAGCCCGACGCCAAGGATAATGGCGGCTTCAGCGATATCATCGGAAACAATTTCTTCTCGGAGGAAGAGACGAAGAACGGTGGTACAGATGCTGCCATCGCTGCGGAGAATTTGAGCCGGAGCCTTGAAGGACCGCAATTGGACGACGATTCGTGCTCCACTTCAGATGGCGGTGATGACGTTTTAAGCACAAAAAAACATTTAAACCATAAGAGAAAGCGAACGACAAGATCGCTTGAGCTTTTCGTGGAAAATTTGATAATGAAGGTAATGAATAAACAGGAGGAGATGCATAGGCAGTTGATAGACATGATAGAAAAGAATGAGAAAGAGAGAATAGTCAGAGAAGAAGCTTGGAAACAGAGGGAGATCGAAAGAATGAGAAGAGACGAGGAGTTGAGAGCCCAAGAAACGTCTCGCAGCTTAGCAATTATCTCCTTCATCCAAAATCTGCTAGGCCATGAAATTCAAATCTCACAACCAGTCGAAAACCACTGTACAGAAGACGATGGAGGTGAAAGCAGCATACAGAAGGAGCTAAAAAGCGATCCAAGTAGTAGAAGATGGCCTCGAGCTGAAGTACAATCTTTGATATCACTTCGAACTTCGCTAGAACATAAATTCCGTGCTACAGGCTCGAAAGGTTCTATATGGGAGGAGATATCAGTCGAGATGCAGAAGGTCGGTTACAACCGTTCGGCAAAGAAATGCAAAGAAAAATGGGAAAATATGAACAAGTATTTCAAAAGAACAATAGGAACTGGGAAAGCTAGTATTGCAAACGGTAAGACATGCCCATATTTTCAAGAATTAGATACTCTTTATAGAAATGGAGTAGTAAATTCAGGAGCTGTCATTGATAGTACAAGCACTGAACATAATTCACAGGCTGAAAGAAGTATAGACCCCTTTCATGAAGATGAGGCCTTTGTACAAGGTGAAAGTGAAAGAGAGCATGTAAAACAGGAGGCCTTGGAGATGACACAATTTTAAAGAGATTTACGTGTACACTACCGATCCGTTCGGTCGATTTTTGCAGCCCAGCTTTCGGATAACGCAGGTTCTTCCTGCTTCCGGCTGATCTATTCATGGCTGCTTTCCTGTTGGACGTTAGCAGGAAATGATGGCAGTAGATTGAAGAATCACAACGCTTGAATCAAGTTTTGGGATGTGGCGATGATGCTAAGTAAATGGATAACAGTTGTAAACATATCAAACTTTATTCTTATGGATTTGTTTAGATTTACTGTTTAAATTTTCGGTTAGTTTGTAATGAGAAATACGTTGATATCGATTTGCTATGTTACGTTGATATCGATTCGCTATGTTATGCTATGTTACGTTGATATCGATTCGCTATGTTATGCTATGTTACGTTGATATCGAT ATGGACCTCTTCACCGGCGATCACCGGATTCCGAGCTCCGACAGCTTCCCACAGCACGTTGCTCCATTTCCCGATTCGACGGACCTCCTCTACGCTGCTCCTTCTGCCGTATTTCCCTCTGCCGACATCATCGCCCACCTACCAAACCCTCCGCCGCCGCCGCAGAAGCTCCGTCCTATCCGCTGCAACGGTAGGTCCCCGGCGGGTTCTCAGGCCGATAACATCTTCGACGGTGCTCTAAGGAGTTTCCAATGTGTTTCGTCGTCACCAGAGGGTGGATTTTCTGGCGATCAGCTCTGTGTGGCTAATATTGACCCTTGCCAGTACTTCAATTCCTCTGAGAAAGATGATAAGCCCGACGCCAAGGATAATGGCGGCTTCAGCGATATCATCGGAAACAATTTCTTCTCGGAGGAAGAGACGAAGAACGGTGGTACAGATGCTGCCATCGCTGCGGAGAATTTGAGCCGGAGCCTTGAAGGACCGCAATTGGACGACGATTCGTGCTCCACTTCAGATGGCGGTGATGACGTTTTAAGCACAAAAAAACATTTAAACCATAAGAGAAAGCGAACGACAAGATCGCTTGAGCTTTTCGTGGAAAATTTGATAATGAAGGTAATGAATAAACAGGAGGAGATGCATAGGCAGTTGATAGACATGATAGAAAAGAATGAGAAAGAGAGAATAGTCAGAGAAGAAGCTTGGAAACAGAGGGAGATCGAAAGAATGAGAAGAGACGAGGAGTTGAGAGCCCAAGAAACGTCTCGCAGCTTAGCAATTATCTCCTTCATCCAAAATCTGCTAGGCCATGAAATTCAAATCTCACAACCAGTCGAAAACCACTGTACAGAAGACGATGGAGGTGAAAGCAGCATACAGAAGGAGCTAAAAAGCGATCCAAGTAGTAGAAGATGGCCTCGAGCTGAAGTACAATCTTTGATATCACTTCGAACTTCGCTAGAACATAAATTCCGTGCTACAGGCTCGAAAGGTTCTATATGGGAGGAGATATCAGTCGAGATGCAGAAGGTCGGTTACAACCGTTCGGCAAAGAAATGCAAAGAAAAATGGGAAAATATGAACAAGTATTTCAAAAGAACAATAGGAACTGGGAAAGCTAGTATTGCAAACGGTAAGACATGCCCATATTTTCAAGAATTAGATACTCTTTATAGAAATGGAGTAGTAAATTCAGGAGCTGTCATTGATAGTACAAGCACTGAACATAATTCACAGGCTGAAAGAAGTATAGACCCCTTTCATGAAGATGAGGCCTTTGTACAAGGTGAAAGTGAAAGAGAGCATGTAAAACAGGAGGCCTTGGAGATGACACAATTTTAA MDLFTGDHRIPSSDSFPQHVAPFPDSTDLLYAAPSAVFPSADIIAHLPNPPPPPQKLRPIRCNGRSPAGSQADNIFDGALRSFQCVSSSPEGGFSGDQLCVANIDPCQYFNSSEKDDKPDAKDNGGFSDIIGNNFFSEEETKNGGTDAAIAAENLSRSLEGPQLDDDSCSTSDGGDDVLSTKKHLNHKRKRTTRSLELFVENLIMKVMNKQEEMHRQLIDMIEKNEKERIVREEAWKQREIERMRRDEELRAQETSRSLAIISFIQNLLGHEIQISQPVENHCTEDDGGESSIQKELKSDPSSRRWPRAEVQSLISLRTSLEHKFRATGSKGSIWEEISVEMQKVGYNRSAKKCKEKWENMNKYFKRTIGTGKASIANGKTCPYFQELDTLYRNGVVNSGAVIDSTSTEHNSQAERSIDPFHEDEAFVQGESEREHVKQEALEMTQF
BLAST of CmaCh13G003880 vs. Swiss-Prot
Match: TGT2_ARATH (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.7e-33 Identity = 109/332 (32.83%), Postives = 168/332 (50.60%), Query Frame = 1
BLAST of CmaCh13G003880 vs. Swiss-Prot
Match: GTL1_ARATH (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1 PE=1 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-27 Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 1
BLAST of CmaCh13G003880 vs. Swiss-Prot
Match: GTL2_ARATH (Trihelix transcription factor GTL2 OS=Arabidopsis thaliana GN=At5g28300 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 7.0e-19 Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 1
BLAST of CmaCh13G003880 vs. Swiss-Prot
Match: PTL_ARATH (Trihelix transcription factor PTL OS=Arabidopsis thaliana GN=PTL PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 9.4e-16 Identity = 39/89 (43.82%), Postives = 62/89 (69.66%), Query Frame = 1
BLAST of CmaCh13G003880 vs. Swiss-Prot
Match: TGT4_ARATH (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.3e-09 Identity = 38/120 (31.67%), Postives = 64/120 (53.33%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TrEMBL
Match: A0A0A0LYK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181390 PE=4 SV=1) HSP 1 Score: 745.0 bits (1922), Expect = 5.4e-212 Identity = 382/448 (85.27%), Postives = 409/448 (91.29%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TrEMBL
Match: A0A067L8R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01336 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 6.2e-83 Identity = 196/440 (44.55%), Postives = 263/440 (59.77%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TrEMBL
Match: A0A061GHU7_THECC (Duplicated homeodomain-like superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030445 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 6.5e-80 Identity = 200/452 (44.25%), Postives = 263/452 (58.19%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TrEMBL
Match: A0A061GIL1_THECC (Duplicated homeodomain-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030445 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 6.5e-80 Identity = 200/452 (44.25%), Postives = 263/452 (58.19%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TrEMBL
Match: A0A0B0N518_GOSAR (Trihelix transcription factor GT-2-like protein OS=Gossypium arboreum GN=F383_03813 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.2e-75 Identity = 191/433 (44.11%), Postives = 255/433 (58.89%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TAIR10
Match: AT5G47660.1 (AT5G47660.1 Homeodomain-like superfamily protein) HSP 1 Score: 191.8 bits (486), Expect = 9.0e-49 Identity = 155/423 (36.64%), Postives = 224/423 (52.96%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TAIR10
Match: AT1G76890.2 (AT1G76890.2 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 9.6e-35 Identity = 109/332 (32.83%), Postives = 168/332 (50.60%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TAIR10
Match: AT1G76880.1 (AT1G76880.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32 Identity = 97/289 (33.56%), Postives = 146/289 (50.52%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TAIR10
Match: AT1G33240.1 (AT1G33240.1 GT-2-like 1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-28 Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 1
BLAST of CmaCh13G003880 vs. TAIR10
Match: AT5G28300.1 (AT5G28300.1 Duplicated homeodomain-like superfamily protein) HSP 1 Score: 96.7 bits (239), Expect = 3.9e-20 Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 1
BLAST of CmaCh13G003880 vs. NCBI nr
Match: gi|449443688|ref|XP_004139609.1| (PREDICTED: trihelix transcription factor GT-2 [Cucumis sativus]) HSP 1 Score: 745.0 bits (1922), Expect = 7.8e-212 Identity = 382/448 (85.27%), Postives = 409/448 (91.29%), Query Frame = 1
BLAST of CmaCh13G003880 vs. NCBI nr
Match: gi|659127350|ref|XP_008463656.1| (PREDICTED: trihelix transcription factor GT-2, partial [Cucumis melo]) HSP 1 Score: 572.0 bits (1473), Expect = 9.1e-160 Identity = 292/339 (86.14%), Postives = 313/339 (92.33%), Query Frame = 1
BLAST of CmaCh13G003880 vs. NCBI nr
Match: gi|359497406|ref|XP_003635505.1| (PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]) HSP 1 Score: 328.2 bits (840), Expect = 2.3e-86 Identity = 194/434 (44.70%), Postives = 277/434 (63.82%), Query Frame = 1
BLAST of CmaCh13G003880 vs. NCBI nr
Match: gi|802547007|ref|XP_012088032.1| (PREDICTED: trihelix transcription factor GTL1 [Jatropha curcas]) HSP 1 Score: 316.2 bits (809), Expect = 9.0e-83 Identity = 196/440 (44.55%), Postives = 263/440 (59.77%), Query Frame = 1
BLAST of CmaCh13G003880 vs. NCBI nr
Match: gi|590627173|ref|XP_007026376.1| (Duplicated homeodomain-like superfamily protein, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 306.2 bits (783), Expect = 9.3e-80 Identity = 200/452 (44.25%), Postives = 263/452 (58.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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