CsGy1G014500 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATTGCATGTCGTTTTATTTTCCTAACCCCACCATTTACTATCTCCCCTTTTTCTTTTATACATCAAATGACCATAGAAAAAAAAAAGACAAACCAAAAACGCTTTTTGTTCATCATTTGAATATCAATCCTTTATAAAGCTTAAGTTTTTCTTTTTGCTCTTTTTTGTTTTCAACATATGAAGATGAGATCGTTATGTTAAACCTTTGAAGATATGGGTTTGAGAAATCACATGGCAGAAGAAAACATCTTTTGTCTTCAATCCCCAACTTTCATAGAATGGCTTAAACCACACAACCCCTCTTCTTCCTCTCCCTCCATCCCTCAGACGAGCGTCAAATGCGTTCCAGGGCGATGCCTCCCTTTGTTCACGGAGACGGAGGCCTCGGCGAAGAAGGGCGAAGAAGGGACTCCAGCTGGAGATGGTGAAAGAAAATATTTGGATGTCAAAGCGGAGGATGAAGATATGGAGAAAGTTGAAGTGGGTTTGCACATTGGGCTTCCAAATGTTGGTGATGTCTCTTATTTTGGTGATGAGAAGAACATGAATGTTTGTGTAAAGAAAGAAGAAATACACAGCTTGAAGAAAAGCTTCTCTAATTTTAATACTCAAGGAAGGTTTTGGATCCCAACACAAGCTCAAATCCTTGTTGGTCCCATGCAATTTGCTTGCTCAATCTGCAACAAATCATTTAATAGATATAATAACATGCAGGTAAAGTAATTTAATTATCATTAAACCTTGTCTCTACTTACCTTTTATTATATATATTGCTGATGATATATATCCTTACTAATTGATCTCTTTCTAAAATTAAAACCCTTGTTTATAACCTACTTCTAATTTCTATGATTAAGATTAGAAATTCAAATTCATATACCCTATCAAAGAAAATTTAGTTTTGAATACTTTTTAGTACTAAGACACCATTTGGATTTTAACTTTATTCTTTTTTTAAATGGAATTCATTTTGTTAGGCGAATTTTTAAAAACAAAAACAAATTTTTGAAAAACTATATTTTCATAGTTTCATATCTTTGATTTTGAAAATACTTCTAAAATGTAGTCAAGAAAATAGAAATAAATAAAAAATATATATCAAACGAGCCAAAATTCTTTATCTACAATGTAATTAATTTGGTTAAATATCTTTCCAATTTACTTTCTTTTATTAAAAACAAAGTTATTATTTTAGTATATTGAAATATTCTTCTAAAAATACAGTTCTATCATTCAAGAGTTTAGGCTATTTTGAACTAATGCTAGCTAATGATCTCTCTTTTTCTCTTTACGACTTTGCATCCAAGGGGACCCCGTTAATGTTGCTAAAAACCAAGCTTTCTCGTGAGGACACAGGAGAGAAAAAAACTACTTTCTTAAAACTCATCGTGTTTAGTGAAAGAAAAAGCTAAGCCATATAAAAAATAAATTAAATCAAAGTCAATAATGAAGACCCGTTTGATTACAAGAACCTGTCTTTCTTTTCTGTTCTTCAAATTTAGGTTGCTTTCCATCCATTTATCCCTCTCTCTCTATATATAGTTTTCACATACCTTGAAAAATGTTTGAATTTGTAGTCAATTTTTAATTAAGAAAGTTAGTTATTACAATTTGTTTAAGTTATGCTTGGTTACTTATTTGATTTTTTGTTTTGGAAAATTGTACCTGTTTTCATCTTTAAAATATATATATATACAAATTATGGATAGAGGGTGAAATGATGTACAATTACTTAGTTTTCAAATAAAAAAAAGCTAAATACAAATGATTATCAAAATACATTCTTAGTTATTCAAATTTTGGTTTGAGTTTTGAAAAACCTTGGTAGAATATAAATAACATAGAAACTTATGAGTGAAAGTAATATTTAGAATCCTAATTTCCATAACAAAAAACCAAAACAAAAATATGGTTATTAAACTAGGCGTAAGAATTTTAATATTGGAAACTCCAAGGTCTCTTTTGACCCCTACTTAACCTTTCTTGTACTTAAATCACACCAGCACTTCGACTTCCATTTTGAATTAGTTGGTTCAATTTCCCATCTCGTATTCGTTTTTTTTCGATTCTTTTTTGAAAAGAAAAACACTTAGCTCCACATATACGTATGTTAATATACTTGTAGATGCACATGTGGGGGCATGGATCTGAGTACAGAAAAGGGCCAGAATCTCTAAGAGGAACACAACCAGCAGCAATGCTAAGGCTTCCATGTTATTGCTGTGCTCAAGGCTGCAAGAACAACATTAACCATCCAAGAGCCAAGCCATTGAAGGACTTCAGAACCCTTCAAACTCATTACAAAAGAAAACATGGCTGTAAGCCATTTATGTGCAGAAAATGTGGAAAATCTTTGGCTGTTAAAGGAGATTGGAGAACCCATGAAAAGAATTGTGGTAAGCTTTGGTATTGCAGCTGTGGCTCAGATTTCAAACACAAAAGATCTCTAAAAGATCATATTAGATCCTTTGGTAAAGGCCATTCCCCCTGCTCCTCTCTTGATGATGAATGTCTCACTGGTTCTGATGATCAAGAAGATCACTTCTGTTAAATTATGTGTTGGTAATTTCCGTTATTAGGGCTTCTTTCTTATCGATGATCTCATGCAACATCTTGAATTATCTCGTGCTCAGTAACAAAACATTCTCCGACTGACGGGTTGTGCGAGGAGGAATTATTTGGGAGATTGGAACAATGTGGTTTGGATGCATCCATGTGAGTGTTGGAAGGAGACAACTACATTGTGACAATTACATTGAATGGTTTTCTGAGAAGCTCGAGAGGGAACGATTTGTTACGGAGCACTGTGATATATTTTCTTTTTTTTCTTTCTTTCTTTCTATGAAGGCTTAGGGTTTTCTAATAAGATGGGATTGCCACAAGTGATGAAGTAGGTGAATTTTCTTCTTTTGAGAGGGTGTTAGGTTTTATTGTCTCTCTTTCATGGAGGAAATTTGTCAGCTTCATTGCTTATTGTATAGTGGCATTCTTTCATATACGAAGGTTGAAAAACTCTCTCTTTTTGTTACTAATTTCACTATCCCTTTCCTCTTTTGAAGAACTTTTATGAAGAATTTCAAAGTATAATTATTTATATTATATGCTTTTATGAATCTTTCGGTAGGTTGCACTTTATTATTG TTCATTGCATGTCGTTTTATTTTCCTAACCCCACCATTTACTATCTCCCCTTTTTCTTTTATACATCAAATGACCATAGAAAAAAAAAAGACAAACCAAAAACGCTTTTTGTTCATCATTTGAATATCAATCCTTTATAAAGCTTAAGTTTTTCTTTTTGCTCTTTTTTGTTTTCAACATATGAAGATGAGATCGTTATGTTAAACCTTTGAAGATATGGGTTTGAGAAATCACATGGCAGAAGAAAACATCTTTTGTCTTCAATCCCCAACTTTCATAGAATGGCTTAAACCACACAACCCCTCTTCTTCCTCTCCCTCCATCCCTCAGACGAGCGTCAAATGCGTTCCAGGGCGATGCCTCCCTTTGTTCACGGAGACGGAGGCCTCGGCGAAGAAGGGCGAAGAAGGGACTCCAGCTGGAGATGGTGAAAGAAAATATTTGGATGTCAAAGCGGAGGATGAAGATATGGAGAAAGTTGAAGTGGGTTTGCACATTGGGCTTCCAAATGTTGGTGATGTCTCTTATTTTGGTGATGAGAAGAACATGAATGTTTGTGTAAAGAAAGAAGAAATACACAGCTTGAAGAAAAGCTTCTCTAATTTTAATACTCAAGGAAGGTTTTGGATCCCAACACAAGCTCAAATCCTTGTTGGTCCCATGCAATTTGCTTGCTCAATCTGCAACAAATCATTTAATAGATATAATAACATGCAGATGCACATGTGGGGGCATGGATCTGAGTACAGAAAAGGGCCAGAATCTCTAAGAGGAACACAACCAGCAGCAATGCTAAGGCTTCCATGTTATTGCTGTGCTCAAGGCTGCAAGAACAACATTAACCATCCAAGAGCCAAGCCATTGAAGGACTTCAGAACCCTTCAAACTCATTACAAAAGAAAACATGGCTGTAAGCCATTTATGTGCAGAAAATGTGGAAAATCTTTGGCTGTTAAAGGAGATTGGAGAACCCATGAAAAGAATTGTGGTAAGCTTTGGTATTGCAGCTGTGGCTCAGATTTCAAACACAAAAGATCTCTAAAAGATCATATTAGATCCTTTGGTAAAGGCCATTCCCCCTGCTCCTCTCTTGATGATGAATGTCTCACTGGTTCTGATGATCAAGAAGATCACTTCTGTTAAATTATGTGTTGGTAATTTCCGTTATTAGGGCTTCTTTCTTATCGATGATCTCATGCAACATCTTGAATTATCTCGTGCTCAGTAACAAAACATTCTCCGACTGACGGGTTGTGCGAGGAGGAATTATTTGGGAGATTGGAACAATGTGGTTTGGATGCATCCATGTGAGTGTTGGAAGGAGACAACTACATTGTGACAATTACATTGAATGGTTTTCTGAGAAGCTCGAGAGGGAACGATTTGTTACGGAGCACTGTGATATATTTTCTTTTTTTTCTTTCTTTCTTTCTATGAAGGCTTAGGGTTTTCTAATAAGATGGGATTGCCACAAGTGATGAAGTAGGTGAATTTTCTTCTTTTGAGAGGGTGTTAGGTTTTATTGTCTCTCTTTCATGGAGGAAATTTGTCAGCTTCATTGCTTATTGTATAGTGGCATTCTTTCATATACGAAGGTTGAAAAACTCTCTCTTTTTGTTACTAATTTCACTATCCCTTTCCTCTTTTGAAGAACTTTTATGAAGAATTTCAAAGTATAATTATTTATATTATATGCTTTTATGAATCTTTCGGTAGGTTGCACTTTATTATTG ATGGGTTTGAGAAATCACATGGCAGAAGAAAACATCTTTTGTCTTCAATCCCCAACTTTCATAGAATGGCTTAAACCACACAACCCCTCTTCTTCCTCTCCCTCCATCCCTCAGACGAGCGTCAAATGCGTTCCAGGGCGATGCCTCCCTTTGTTCACGGAGACGGAGGCCTCGGCGAAGAAGGGCGAAGAAGGGACTCCAGCTGGAGATGGTGAAAGAAAATATTTGGATGTCAAAGCGGAGGATGAAGATATGGAGAAAGTTGAAGTGGGTTTGCACATTGGGCTTCCAAATGTTGGTGATGTCTCTTATTTTGGTGATGAGAAGAACATGAATGTTTGTGTAAAGAAAGAAGAAATACACAGCTTGAAGAAAAGCTTCTCTAATTTTAATACTCAAGGAAGGTTTTGGATCCCAACACAAGCTCAAATCCTTGTTGGTCCCATGCAATTTGCTTGCTCAATCTGCAACAAATCATTTAATAGATATAATAACATGCAGATGCACATGTGGGGGCATGGATCTGAGTACAGAAAAGGGCCAGAATCTCTAAGAGGAACACAACCAGCAGCAATGCTAAGGCTTCCATGTTATTGCTGTGCTCAAGGCTGCAAGAACAACATTAACCATCCAAGAGCCAAGCCATTGAAGGACTTCAGAACCCTTCAAACTCATTACAAAAGAAAACATGGCTGTAAGCCATTTATGTGCAGAAAATGTGGAAAATCTTTGGCTGTTAAAGGAGATTGGAGAACCCATGAAAAGAATTGTGGTAAGCTTTGGTATTGCAGCTGTGGCTCAGATTTCAAACACAAAAGATCTCTAAAAGATCATATTAGATCCTTTGGTAAAGGCCATTCCCCCTGCTCCTCTCTTGATGATGAATGTCTCACTGGTTCTGATGATCAAGAAGATCACTTCTGTTAA MGLRNHMAEENIFCLQSPTFIEWLKPHNPSSSSPSIPQTSVKCVPGRCLPLFTETEASAKKGEEGTPAGDGERKYLDVKAEDEDMEKVEVGLHIGLPNVGDVSYFGDEKNMNVCVKKEEIHSLKKSFSNFNTQGRFWIPTQAQILVGPMQFACSICNKSFNRYNNMQMHMWGHGSEYRKGPESLRGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGCKPFMCRKCGKSLAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIRSFGKGHSPCSSLDDECLTGSDDQEDHFC
BLAST of CsGy1G014500 vs. NCBI nr
Match: XP_004139578.1 (PREDICTED: zinc finger protein WIP3 [Cucumis sativus] >KGN64919.1 hypothetical protein Csa_1G160590 [Cucumis sativus]) HSP 1 Score: 671.0 bits (1730), Expect = 1.9e-189 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsGy1G014500 vs. NCBI nr
Match: XP_008461629.1 (PREDICTED: zinc finger protein WIP3 [Cucumis melo]) HSP 1 Score: 622.9 bits (1605), Expect = 6.0e-175 Identity = 294/324 (90.74%), Postives = 299/324 (92.28%), Query Frame = 0
BLAST of CsGy1G014500 vs. NCBI nr
Match: XP_022142412.1 (zinc finger protein WIP3-like [Momordica charantia]) HSP 1 Score: 494.2 bits (1271), Expect = 3.2e-136 Identity = 244/339 (71.98%), Postives = 266/339 (78.47%), Query Frame = 0
BLAST of CsGy1G014500 vs. NCBI nr
Match: XP_022932182.1 (zinc finger protein WIP3-like [Cucurbita moschata]) HSP 1 Score: 463.8 bits (1192), Expect = 4.7e-127 Identity = 236/321 (73.52%), Postives = 247/321 (76.95%), Query Frame = 0
BLAST of CsGy1G014500 vs. NCBI nr
Match: XP_023519852.1 (zinc finger protein WIP3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 4.7e-127 Identity = 236/321 (73.52%), Postives = 247/321 (76.95%), Query Frame = 0
BLAST of CsGy1G014500 vs. TAIR10
Match: AT1G08290.1 (WIP domain protein 3) HSP 1 Score: 325.9 bits (834), Expect = 2.7e-89 Identity = 178/345 (51.59%), Postives = 214/345 (62.03%), Query Frame = 0
BLAST of CsGy1G014500 vs. TAIR10
Match: AT3G20880.1 (WIP domain protein 4) HSP 1 Score: 323.9 bits (829), Expect = 1.0e-88 Identity = 158/297 (53.20%), Postives = 189/297 (63.64%), Query Frame = 0
BLAST of CsGy1G014500 vs. TAIR10
Match: AT1G51220.1 (WIP domain protein 5) HSP 1 Score: 314.7 bits (805), Expect = 6.3e-86 Identity = 140/217 (64.52%), Postives = 160/217 (73.73%), Query Frame = 0
BLAST of CsGy1G014500 vs. TAIR10
Match: AT3G57670.1 (C2H2-type zinc finger family protein) HSP 1 Score: 308.9 bits (790), Expect = 3.5e-84 Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy1G014500 vs. TAIR10
Match: AT1G13290.1 (C2H2-like zinc finger protein) HSP 1 Score: 295.8 bits (756), Expect = 3.0e-80 Identity = 132/202 (65.35%), Postives = 158/202 (78.22%), Query Frame = 0
BLAST of CsGy1G014500 vs. Swiss-Prot
Match: sp|Q9SGD1|ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 5.0e-88 Identity = 178/345 (51.59%), Postives = 214/345 (62.03%), Query Frame = 0
BLAST of CsGy1G014500 vs. Swiss-Prot
Match: sp|Q8W030|ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.9e-87 Identity = 158/297 (53.20%), Postives = 189/297 (63.64%), Query Frame = 0
BLAST of CsGy1G014500 vs. Swiss-Prot
Match: sp|Q8W031|ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84 Identity = 140/217 (64.52%), Postives = 160/217 (73.73%), Query Frame = 0
BLAST of CsGy1G014500 vs. Swiss-Prot
Match: sp|Q9SVY1|ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 6.3e-83 Identity = 128/154 (83.12%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy1G014500 vs. Swiss-Prot
Match: sp|Q9FX68|ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 5.5e-79 Identity = 132/202 (65.35%), Postives = 158/202 (78.22%), Query Frame = 0
BLAST of CsGy1G014500 vs. TrEMBL
Match: tr|A0A0A0LVD5|A0A0A0LVD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G160590 PE=4 SV=1) HSP 1 Score: 671.0 bits (1730), Expect = 1.3e-189 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsGy1G014500 vs. TrEMBL
Match: tr|A0A1S3CF21|A0A1S3CF21_CUCME (zinc finger protein WIP3 OS=Cucumis melo OX=3656 GN=LOC103500186 PE=4 SV=1) HSP 1 Score: 622.9 bits (1605), Expect = 4.0e-175 Identity = 294/324 (90.74%), Postives = 299/324 (92.28%), Query Frame = 0
BLAST of CsGy1G014500 vs. TrEMBL
Match: tr|A0A2P4J4N6|A0A2P4J4N6_QUESU (Zinc finger protein wip3 OS=Quercus suber OX=58331 GN=CFP56_49137 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 4.0e-111 Identity = 206/329 (62.61%), Postives = 237/329 (72.04%), Query Frame = 0
BLAST of CsGy1G014500 vs. TrEMBL
Match: tr|A0A1S3TUQ4|A0A1S3TUQ4_VIGRR (zinc finger protein WIP3-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106758979 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-110 Identity = 207/306 (67.65%), Postives = 230/306 (75.16%), Query Frame = 0
BLAST of CsGy1G014500 vs. TrEMBL
Match: tr|M5W3N7|M5W3N7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G127700 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-109 Identity = 205/316 (64.87%), Postives = 233/316 (73.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |