Cp4.1LG20g07360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g07360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein SENSITIVE TO PROTON RHIZOTOXICITY 1
LocationCp4.1LG20 : 6157225 .. 6158315 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTTCTCTTCTGATTTCCATTCAACTTCCCTCCTTTACAACCTCTCTATTTTGAAGGACAAGCTCCACCAAATCCAATCCGTTGTCTCCCTCGTCGTCTACGACTTTCAAAACTCGACCGAGTCCCTCCCTCGAGACTTGTCGCAGTTACCGACGGTCAACTCTCTGATCCAGGAACTCATCATGGCTGCTTCTTCCATGTTGTTCACATGTCAAGAGATGAATAACTTCGCTGTGAACTCGTCGTTACATAACGATGTTGTCGATAATAATCTCCAAGGTCTTGTTGACAACGATAATCGACCTTCCATCGCCCTTCTCGACGTGGCCAACGATCATCGGCATCATCAGAATTGGTACTGTTGAACATAACTTTTTGTAGGAAACACTCGATCTATAAGCATTCTGTGTTTTGTATTTGACAATTAGGTCATATGATTATTGGGTTTGACCTTATTGGACTAGTGATATATTTTAACAGGTACAACATGACATCTACTACTAATAACGACGACAACGACAACAATAGCAGTAGAGTAACGACAACGAAAACAACACAAGATTATCGAACTACGATCGATATTGTCGAACTAGACGCGACAGATCTTCTTGCAAAATACACCCATTATTGCCAAATTTGCGGGAAAGGGTTCAAGCGGGACGCGAACCTACGAATGCACATGCGAGCACACGGGGACGAGTACAAAGCGAGCGGGGCGTTGAGTAACCCGGAGAAGAGTCATAGAAGGGATATGAACATAAACAAGAAATTAGGGACTAAATACTCATGTCCACAAGAGGGCTGCAGATGGAACCAAAAACATGCCAAGTTTCAGCCGTTGAAATCACTGATTTGTGTGAAAAATCATTACAAGAGAACCCATTGCCCCAAAATGTATGTCTGCAAGCTCTGCAGCGGCAAGAAATTTTCAGTGCTATCAGATTTGAGGACTCATGAGAAACACTGTGGAGACATGAAATGGGTTTGTTCTTGTGGCACCACATTTTACAGGAAAGATAAGCTCATGGGTCATGTCGCTCTGTTCGTCGGGCATGCCCCGGCAATCAGTTCGTCGGTAAGAGCGTAG

mRNA sequence

ATGCCTTTCTCTTCTGATTTCCATTCAACTTCCCTCCTTTACAACCTCTCTATTTTGAAGGACAAGCTCCACCAAATCCAATCCGTTGTCTCCCTCGTCGTCTACGACTTTCAAAACTCGACCGAGTCCCTCCCTCGAGACTTGTCGCAGTTACCGACGGTCAACTCTCTGATCCAGGAACTCATCATGGCTGCTTCTTCCATGTTGTTCACATGTCAAGAGATGAATAACTTCGCTGTGAACTCGTCGTTACATAACGATGTTGTCGATAATAATCTCCAAGACGCGACAGATCTTCTTGCAAAATACACCCATTATTGCCAAATTTGCGGGAAAGGGTTCAAGCGGGACGCGAACCTACGAATGCACATGCGAGCACACGGGGACGAGTACAAAGCGAGCGGGGCGTTGAGTAACCCGGAGAAGAGTCATAGAAGGGATATGAACATAAACAAGAAATTAGGGACTAAATACTCATGTCCACAAGAGGGCTGCAGATGGAACCAAAAACATGCCAAGTTTCAGCCGTTGAAATCACTGATTTGTGTGAAAAATCATTACAAGAGAACCCATTGCCCCAAAATGTATGTCTGCAAGCTCTGCAGCGGCAAGAAATTTTCAGTGCTATCAGATTTGAGGACTCATGAGAAACACTGTGGAGACATGAAATGGGTTTGTTCTTGTGGCACCACATTTTACAGGAAAGATAAGCTCATGGGTCATGTCGCTCTGTTCGTCGGGCATGCCCCGGCAATCAGTTCGTCGGTAAGAGCGTAG

Coding sequence (CDS)

ATGCCTTTCTCTTCTGATTTCCATTCAACTTCCCTCCTTTACAACCTCTCTATTTTGAAGGACAAGCTCCACCAAATCCAATCCGTTGTCTCCCTCGTCGTCTACGACTTTCAAAACTCGACCGAGTCCCTCCCTCGAGACTTGTCGCAGTTACCGACGGTCAACTCTCTGATCCAGGAACTCATCATGGCTGCTTCTTCCATGTTGTTCACATGTCAAGAGATGAATAACTTCGCTGTGAACTCGTCGTTACATAACGATGTTGTCGATAATAATCTCCAAGACGCGACAGATCTTCTTGCAAAATACACCCATTATTGCCAAATTTGCGGGAAAGGGTTCAAGCGGGACGCGAACCTACGAATGCACATGCGAGCACACGGGGACGAGTACAAAGCGAGCGGGGCGTTGAGTAACCCGGAGAAGAGTCATAGAAGGGATATGAACATAAACAAGAAATTAGGGACTAAATACTCATGTCCACAAGAGGGCTGCAGATGGAACCAAAAACATGCCAAGTTTCAGCCGTTGAAATCACTGATTTGTGTGAAAAATCATTACAAGAGAACCCATTGCCCCAAAATGTATGTCTGCAAGCTCTGCAGCGGCAAGAAATTTTCAGTGCTATCAGATTTGAGGACTCATGAGAAACACTGTGGAGACATGAAATGGGTTTGTTCTTGTGGCACCACATTTTACAGGAAAGATAAGCTCATGGGTCATGTCGCTCTGTTCGTCGGGCATGCCCCGGCAATCAGTTCGTCGGTAAGAGCGTAG

Protein sequence

MPFSSDFHSTSLLYNLSILKDKLHQIQSVVSLVVYDFQNSTESLPRDLSQLPTVNSLIQELIMAASSMLFTCQEMNNFAVNSSLHNDVVDNNLQDATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISSSVRA
Homology
[Close]
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match: STOP1_ORYSJ (Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-59
Identity = 100/155 (64.52%), Postives = 122/155 (78.71%), Query Frame = 1 

Query: 98  DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 157
           ++LA +TH+C ICGKGFKRDANLRMHMR HGDEYK + AL+ P K    D ++     T+
Sbjct: 275 EILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSK----DSSLESAPVTR 334

Query: 158 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 217
           YSCP  GC+ N++H KFQPLK+++CVKNHYKR+HC K Y C  C+ KKFSV++DL+THEK
Sbjct: 335 YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEK 394

Query: 218 HCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAI 253
           HCG  KW+CSCGTTF RKDKL GHVALF GH PA+
Sbjct: 395 HCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPAL 425

[Close]
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-57
Identity = 99/155 (63.87%), Postives = 118/155 (76.13%), Query Frame = 1 

Query: 98  DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 157
           ++LA +TH+C ICGKGFKRDANLRMHMR HGDEYK + AL+ P K           L  +
Sbjct: 237 EILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE--PMLIKR 296

Query: 158 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 217
           YSCP  GC+ N++H KFQPLK+++CVKNHYKRTHC K + C  C  KKFSV++DL+THEK
Sbjct: 297 YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK 356

Query: 218 HCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAI 253
           HCG  KW+CSCGTTF RKDKL GH+ALF GH PAI
Sbjct: 357 HCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAI 389

[Close]
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match: ART1_ORYSJ (Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.0e-55
Identity = 94/155 (60.65%), Postives = 119/155 (76.77%), Query Frame = 1 

Query: 98  DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 157
           ++LA +TH+C ICGKGFKRDANLRMHMR HGDEYK++ AL+ P      +    +    +
Sbjct: 222 EILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQP-ERR 281

Query: 158 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 217
           YSCP  GC+ N+ HA FQPLK+++CVKNHYKR+HC K +VC  C  K+FSV++DL+THEK
Sbjct: 282 YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEK 341

Query: 218 HCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAI 253
           HCG  +W+CSCGT+F RKDKL  HVALF GHAPA+
Sbjct: 342 HCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375

[Close]
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match: TT1_ARATH (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-23
Identity = 63/154 (40.91%), Postives = 82/154 (53.25%), Query Frame = 1 

Query: 99  LLAKYTHY-CQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 158
           +L  +TH+ C +C K F R  NL+MHM  HG +Y+       PE    +       LG  
Sbjct: 138 ILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYR-----KGPESL--KGTQPRAMLGIP 197

Query: 159 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 218
             C  EGCR +  H + +PLK    ++ HYKR H  K + C+LC GK  +V  D RTHEK
Sbjct: 198 CYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLC-GKLLAVKGDWRTHEK 257

Query: 219 HCGDMKWVCSCGTTFYRKDKLMGHVALF-VGHAP 251
           +CG  +WVC CG+ F  K  L  HV  F  GH P
Sbjct: 258 NCG-KRWVCVCGSDFKHKRSLKDHVKAFGSGHGP 282

[Close]
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 58/145 (40.00%), Postives = 75/145 (51.72%), Query Frame = 1 

Query: 107 CQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCR 166
           C +C K F R  N++MHM  HG +Y+       PE    R       L     C   GC+
Sbjct: 180 CPLCFKTFNRYNNMQMHMWGHGSQYR-----KGPESL--RGTQPTGMLRLPCFCCAPGCK 239

Query: 167 WNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVC 226
            N  H + +PLK    ++ HYKR H  K + C++C GK F+V  D RTHEK+CG + W C
Sbjct: 240 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMC-GKAFAVKGDWRTHEKNCGKL-WYC 299

Query: 227 SCGTTFYRKDKLMGHVALF-VGHAP 251
           SCG+ F  K  L  HV  F  GH P
Sbjct: 300 SCGSDFKHKRSLKDHVKAFGNGHVP 315

[Close]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match: A0A0A0LXZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132120 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.5e-84
Identity = 143/163 (87.73%), Postives = 153/163 (93.87%), Query Frame = 1 

Query: 95  DATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKL 154
           DA+DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHR+D++   K+
Sbjct: 200 DASDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRKDLSNISKM 259

Query: 155 GTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRT 214
           G KYSCPQEGCRWNQKH KFQPLKSLICVKNH+KRTHCPKMYVCKLCS KKFSVLSDLRT
Sbjct: 260 GIKYSCPQEGCRWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRT 319

Query: 215 HEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISSSVR 258
           HEKHCGD+KW+CSCGTTF RKDKLMGHVALFVGH PA+ SS +
Sbjct: 320 HEKHCGDVKWLCSCGTTFSRKDKLMGHVALFVGHTPAMGSSTK 362

[Close]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match: A0A078F820_BRANA (BnaA02g06050D protein OS=Brassica napus GN=BnaA02g06050D PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.0e-77
Identity = 148/261 (56.70%), Postives = 183/261 (70.11%), Query Frame = 1 

Query: 9   STSLLYNLSILKDKLHQIQSVVSLVVYDFQNSTESLPRDLSQLPTVNSLIQELIMAASSM 68
           S SLL NLS ++DK+H IQS+VS  +    N +      L+ +  + SL+QE++ AA+SM
Sbjct: 52  SLSLLLNLSTIQDKVHHIQSLVSFFMISNNNQSSESTSSLA-VANIESLVQEIVTAATSM 111

Query: 69  LFTCQEMNNFAVNSSL--HNDVVDNNLQD-----------------ATDLLAKYTHYCQI 128
           + TCQ+ +   + ++L  H     N  +D                 A DLLAK+THYCQI
Sbjct: 112 MLTCQQRHIHLITTNLDWHGTQSINPKKDQHRFKTRPGNYEILELGADDLLAKFTHYCQI 171

Query: 129 CGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCRWNQ 188
           CGKGFKRDANLRMHMRAHGDEYK   AL +P  SH + +  +  +   YSCPQ GCRWNQ
Sbjct: 172 CGKGFKRDANLRMHMRAHGDEYKTREALISPT-SHDKKVEEHSLMRHYYSCPQHGCRWNQ 231

Query: 189 KHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCG 248
           +H KFQPLKS+IC KNHYKR+HCPKMY+C+ C+ K FSVLSDLRTHEKHCGD+KWVCSCG
Sbjct: 232 RHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCNVKHFSVLSDLRTHEKHCGDIKWVCSCG 291

Query: 249 TTFYRKDKLMGHVALFVGHAP 251
           TTF RKDKLM HV+LFVGH+P
Sbjct: 292 TTFSRKDKLMSHVSLFVGHSP 310

[Close]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match: F6GW79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00780 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.3e-76
Identity = 134/164 (81.71%), Postives = 147/164 (89.63%), Query Frame = 1 

Query: 95  DATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINK-- 154
           DA DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYK++ ALSNP K+  R+M  NK  
Sbjct: 213 DAEDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKSNAALSNPTKNIGREME-NKDD 272

Query: 155 --KLGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLS 214
             KL  KYSCPQEGCRWN+KHAKFQPLKS+ICVKNHYKR+HCPKMY+CK C+ K+FSVLS
Sbjct: 273 LIKLPRKYSCPQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLS 332

Query: 215 DLRTHEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISS 255
           DLRTHEKHCGD+KW+CSCGTTF RKDKLMGHVALFVGH PAI+S
Sbjct: 333 DLRTHEKHCGDLKWLCSCGTTFSRKDKLMGHVALFVGHTPAINS 375

[Close]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match: A5AHN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006074 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.3e-76
Identity = 134/164 (81.71%), Postives = 147/164 (89.63%), Query Frame = 1 

Query: 95  DATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINK-- 154
           DA DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYK++ ALSNP K+  R+M  NK  
Sbjct: 213 DAEDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKSNAALSNPTKNIGREME-NKDD 272

Query: 155 --KLGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLS 214
             KL  KYSCPQEGCRWN+KHAKFQPLKS+ICVKNHYKR+HCPKMY+CK C+ K+FSVLS
Sbjct: 273 LIKLPRKYSCPQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLS 332

Query: 215 DLRTHEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISS 255
           DLRTHEKHCGD+KW+CSCGTTF RKDKLMGHVALFVGH PAI+S
Sbjct: 333 DLRTHEKHCGDLKWLCSCGTTFSRKDKLMGHVALFVGHTPAINS 375

[Close]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match: A0A0D2UIN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G090000 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.0e-75
Identity = 133/184 (72.28%), Postives = 152/184 (82.61%), Query Frame = 1 

Query: 82  SSLHNDVVDNNLQDATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPE 141
           S++  D+++    DA DLLAKYTHYCQ+CGKGFKRDANLRMHMRAHGDEYK+S AL NP 
Sbjct: 216 SAMKYDIIE---LDAEDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSSAALINPM 275

Query: 142 KSHRRDM-------NINKKLGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPK 201
           K+ R          N + K+  KYSCPQEGCRWNQKHAKFQPLKS+ICVKNHYKR+HCPK
Sbjct: 276 KNPREGSSSSSAMGNCSTKMNKKYSCPQEGCRWNQKHAKFQPLKSMICVKNHYKRSHCPK 335

Query: 202 MYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISS 259
           MYVCK C+ K+FSVLSDLRTHEKHCGD+KW CSCGTTF RKDKLMGHVALFVGH PA+ +
Sbjct: 336 MYVCKRCNCKQFSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVALFVGHTPALVT 395

[Close]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match: AT5G22890.1 (AT5G22890.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 261.9 bits (668), Expect = 4.1e-70
Identity = 149/315 (47.30%), Postives = 175/315 (55.56%), Query Frame = 1 

Query: 9   STSLLYNLSILKDKLHQIQSVVS------------------------------------- 68
           S SLLYNLS L +K+HQIQS+VS                                     
Sbjct: 53  SLSLLYNLSTLHEKVHQIQSLVSFYMVSTNNINQSSGSTSLAVANIGSLVQEIITAASSM 112

Query: 69  -LVVYDFQNSTESLPRDLSQLPTVNSLIQEL----------IMAASSMLFTCQEMNNFAV 128
                  Q  + +   D+    TV++++ E            +  S+ LF  QE    + 
Sbjct: 113 LYTCQQLQIGSNNNNNDIDNDQTVDAMVLEFSRQETDPGHDFVQESTNLFGVQERGQISF 172

Query: 129 --------NSSLHNDVVDNNLQ------------DATDLLAKYTHYCQICGKGFKRDANL 188
                   N+   N   D +              D  DLLAKYTHYCQICGKGFKRDANL
Sbjct: 173 PDQNLDWYNTETINPKKDKHRSKPSSGSYDILELDVADLLAKYTHYCQICGKGFKRDANL 232

Query: 189 RMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCRWNQKHAKFQPLKSL 248
           RMHMRAHGDEYK   AL +P    ++     KK    YSCPQ GCRWNQ+H KFQPLKS+
Sbjct: 233 RMHMRAHGDEYKTREALISPTSQDKKGGYSLKK--HYYSCPQHGCRWNQRHEKFQPLKSV 292

Query: 249 ICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCGTTFYRKDKLMG 256
           IC KNHYKR+HCPKMY+C+ CS K FSVLSDLRTHEKHCGD+KWVCSCGT F RKDKLM 
Sbjct: 293 ICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMS 352

[Close]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match: AT1G34370.2 (AT1G34370.2 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58
Identity = 99/155 (63.87%), Postives = 118/155 (76.13%), Query Frame = 1 

Query: 98  DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 157
           ++LA +TH+C ICGKGFKRDANLRMHMR HGDEYK + AL+ P K           L  +
Sbjct: 237 EILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE--PMLIKR 296

Query: 158 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 217
           YSCP  GC+ N++H KFQPLK+++CVKNHYKRTHC K + C  C  KKFSV++DL+THEK
Sbjct: 297 YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK 356

Query: 218 HCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAI 253
           HCG  KW+CSCGTTF RKDKL GH+ALF GH PAI
Sbjct: 357 HCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAI 389

[Close]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match: AT1G34790.1 (AT1G34790.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 63/154 (40.91%), Postives = 82/154 (53.25%), Query Frame = 1 

Query: 99  LLAKYTHY-CQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTK 158
           +L  +TH+ C +C K F R  NL+MHM  HG +Y+       PE    +       LG  
Sbjct: 138 ILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYR-----KGPESL--KGTQPRAMLGIP 197

Query: 159 YSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEK 218
             C  EGCR +  H + +PLK    ++ HYKR H  K + C+LC GK  +V  D RTHEK
Sbjct: 198 CYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLC-GKLLAVKGDWRTHEK 257

Query: 219 HCGDMKWVCSCGTTFYRKDKLMGHVALF-VGHAP 251
           +CG  +WVC CG+ F  K  L  HV  F  GH P
Sbjct: 258 NCG-KRWVCVCGSDFKHKRSLKDHVKAFGSGHGP 282

[Close]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match: AT1G51220.1 (AT1G51220.1 WIP domain protein 5)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 58/145 (40.00%), Postives = 75/145 (51.72%), Query Frame = 1 

Query: 107 CQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCR 166
           C +C K F R  N++MHM  HG +Y+       PE    R       L     C   GC+
Sbjct: 180 CPLCFKTFNRYNNMQMHMWGHGSQYR-----KGPESL--RGTQPTGMLRLPCFCCAPGCK 239

Query: 167 WNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVC 226
            N  H + +PLK    ++ HYKR H  K + C++C GK F+V  D RTHEK+CG + W C
Sbjct: 240 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMC-GKAFAVKGDWRTHEKNCGKL-WYC 299

Query: 227 SCGTTFYRKDKLMGHVALF-VGHAP 251
           SCG+ F  K  L  HV  F  GH P
Sbjct: 300 SCGSDFKHKRSLKDHVKAFGNGHVP 315

[Close]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match: AT3G20880.1 (AT3G20880.1 WIP domain protein 4)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 57/145 (39.31%), Postives = 74/145 (51.03%), Query Frame = 1 

Query: 107 CQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCR 166
           C +C K F R  N++MHM  HG +Y+       PE           KL      P  GC+
Sbjct: 258 CPLCFKTFNRYNNMQMHMWGHGSQYR-----KGPESLRGTQPTAMLKLPCYCCAP--GCK 317

Query: 167 WNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVC 226
            N  H + +PLK    ++ HYKR H  + + C+ C GK F+V  D RTHEK+CG + W C
Sbjct: 318 NNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRC-GKAFAVKGDWRTHEKNCGKL-WYC 377

Query: 227 SCGTTFYRKDKLMGHVALF-VGHAP 251
           SCG+ F  K  L  HV  F  GH P
Sbjct: 378 SCGSDFKHKRSLKDHVKAFGNGHVP 393

[Close]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match: gi|985462825|ref|XP_015388772.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like isoform X2 [Citrus sinensis])

HSP 1 Score: 334.3 bits (856), Expect = 1.8e-88
Identity = 165/258 (63.95%), Postives = 201/258 (77.91%), Query Frame = 1 

Query: 2   PFSSDFHSTSLLYNLSILKDKLHQIQSVVSLVV-YDFQNSTESLPRDLSQLPTVNSLIQE 61
           P S+  + +SLLY++S LK K+HQ+QSV++++V  D    TES    L+ +    SL+QE
Sbjct: 25  PASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANM---RSLVQE 84

Query: 62  LIMAASSMLFTCQEMNNF-AVNSSLHNDVVDNNLQDATDLLAKYTHYCQICGKGFKRDAN 121
           +I+ ASS++ TCQ+M+   A  S ++ D+++    DA DLLAKYTHYCQ+CGKGFKRDAN
Sbjct: 85  IILTASSLMVTCQQMSPPPASTSEINGDIIE---VDAVDLLAKYTHYCQVCGKGFKRDAN 144

Query: 122 LRMHMRAHGDEYKASGALSNPEKSHRRDMNINK----KLGTKYSCPQEGCRWNQKHAKFQ 181
           LRMHMRAHGDEYK S AL+NP K +   M  N     K+  KYSCPQEGCRWN+KHAKFQ
Sbjct: 145 LRMHMRAHGDEYKTSAALTNPLKKNGSSMGNNNESTIKIVRKYSCPQEGCRWNKKHAKFQ 204

Query: 182 PLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCGTTFYRK 241
           PLKS+ICVKNHYKR+HCPKMYVCK C+ K+FSVLSDLRTHEKHCGD KW CSCGTTF RK
Sbjct: 205 PLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRK 264

Query: 242 DKLMGHVALFVGHAPAIS 254
           DKLMGHVALFVGH PA++
Sbjct: 265 DKLMGHVALFVGHTPAVN 276

[Close]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match: gi|657986722|ref|XP_008385495.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like isoform X2 [Malus domestica])

HSP 1 Score: 324.3 bits (830), Expect = 1.9e-85
Identity = 165/283 (58.30%), Postives = 201/283 (71.02%), Query Frame = 1 

Query: 6   DFHSTSLLYNLSILKDKLHQIQSVVSLVVYDFQNSTESLPRDLSQLPTVNSLIQELIMAA 65
           D HSTSLL N S+LK+K+HQ +S+VS+++    + ++        L +++++IQE+I+ A
Sbjct: 48  DNHSTSLLCNFSVLKEKVHQAKSLVSILISPNHHQSQPQESATIALASMSNIIQEIIVTA 107

Query: 66  SSMLFTCQEM----------NNFAVNSSLHNDV--------VDNNLQ----DATDLLAKY 125
           SSM+FTCQ+M          +   VN   +ND         V +N      DA+DLLAKY
Sbjct: 108 SSMMFTCQQMALVSTTTPDTSTRIVNQIGNNDKHVQGKELPVSSNYDIIELDASDLLAKY 167

Query: 126 THYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRD----------MNINKK 185
           THYCQ+CGKGFKRDANLRMHMRAHGDEYK   ALSNP K    +          M  + K
Sbjct: 168 THYCQVCGKGFKRDANLRMHMRAHGDEYKTIVALSNPMKKTNNNNDSAGGIDGNMACSTK 227

Query: 186 LGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLR 245
           L  KYSCPQEGCRWNQKHAKFQPLKS+ICVKNHYKR+HCPKMYVCK C+ K+FSVLSDLR
Sbjct: 228 LPRKYSCPQEGCRWNQKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLR 287

Query: 246 THEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISSSV 257
           THEKHCGD++W CSCGTTF RKDKLMGHVALF GH P + +S+
Sbjct: 288 THEKHCGDLRWQCSCGTTFSRKDKLMGHVALFTGHTPVMITSL 330

[Close]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match: gi|659071903|ref|XP_008462505.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Cucumis melo])

HSP 1 Score: 323.6 bits (828), Expect = 3.2e-85
Identity = 161/247 (65.18%), Postives = 183/247 (74.09%), Query Frame = 1 

Query: 17  SILKDKLHQIQSVV------SLVVYDFQNSTESLPRDLSQLPTVNSLIQELIMAASSMLF 76
           +IL+ + HQ Q  V      S  ++D  N+     +D   L T N+         +    
Sbjct: 127 NILQGQHHQRQGPVDDNNGRSNTLFDMANNHHHQRQDWYNLTTSNNYNDNNNNGRTLTTK 186

Query: 77  TCQEMNNFAVNSSLHNDVVDNNLQDATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDE 136
           T Q+          H + ++    DA+DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDE
Sbjct: 187 TTQD----------HRNSINIVELDASDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDE 246

Query: 137 YKASGALSNPEKSHRRDMNINKKLGTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRT 196
           YKASGALSNPEKSHR+D+N   K+G KYSCPQEGCRWNQKH KFQPLKSLICVKNH+KRT
Sbjct: 247 YKASGALSNPEKSHRKDLNNISKMGIKYSCPQEGCRWNQKHVKFQPLKSLICVKNHFKRT 306

Query: 197 HCPKMYVCKLCSGKKFSVLSDLRTHEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAP 256
           HCPKMYVCKLCS KKFSVLSDLRTHEKHCGD+KW+CSCGTTF RKDKLMGHVALF+GHAP
Sbjct: 307 HCPKMYVCKLCSRKKFSVLSDLRTHEKHCGDVKWLCSCGTTFSRKDKLMGHVALFIGHAP 363

Query: 257 AISSSVR 258
           AI SS +
Sbjct: 367 AIGSSTK 363

[Close]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match: gi|449443590|ref|XP_004139560.1| (PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 3.6e-84
Identity = 143/163 (87.73%), Postives = 153/163 (93.87%), Query Frame = 1 

Query: 95  DATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKL 154
           DA+DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHR+D++   K+
Sbjct: 206 DASDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRKDLSNISKM 265

Query: 155 GTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRT 214
           G KYSCPQEGCRWNQKH KFQPLKSLICVKNH+KRTHCPKMYVCKLCS KKFSVLSDLRT
Sbjct: 266 GIKYSCPQEGCRWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRT 325

Query: 215 HEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISSSVR 258
           HEKHCGD+KW+CSCGTTF RKDKLMGHVALFVGH PA+ SS +
Sbjct: 326 HEKHCGDVKWLCSCGTTFSRKDKLMGHVALFVGHTPAMGSSTK 368

[Close]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match: gi|700209755|gb|KGN64851.1| (hypothetical protein Csa_1G132120 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 3.6e-84
Identity = 143/163 (87.73%), Postives = 153/163 (93.87%), Query Frame = 1 

Query: 95  DATDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDMNINKKL 154
           DA+DLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHR+D++   K+
Sbjct: 200 DASDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRKDLSNISKM 259

Query: 155 GTKYSCPQEGCRWNQKHAKFQPLKSLICVKNHYKRTHCPKMYVCKLCSGKKFSVLSDLRT 214
           G KYSCPQEGCRWNQKH KFQPLKSLICVKNH+KRTHCPKMYVCKLCS KKFSVLSDLRT
Sbjct: 260 GIKYSCPQEGCRWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRT 319

Query: 215 HEKHCGDMKWVCSCGTTFYRKDKLMGHVALFVGHAPAISSSVR 258
           HEKHCGD+KW+CSCGTTF RKDKLMGHVALFVGH PA+ SS +
Sbjct: 320 HEKHCGDVKWLCSCGTTFSRKDKLMGHVALFVGHTPAMGSSTK 362

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g07360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
STOP1_ORYSJ2.3e-5964.52Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g087120... [more]
STOP1_ARATH2.2e-5763.87Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=... [more]
ART1_ORYSJ6.0e-5560.65Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1[more]
TT1_ARATH4.6e-2340.91Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=1 SV=1[more]
ZWIP5_ARATH2.5e-2140.00Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1[more]
BLAST of Cp4.1LG20g07360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXZ1_CUCSA2.5e-8487.73Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132120 PE=4 SV=1[more]
A0A078F820_BRANA3.0e-7756.70BnaA02g06050D protein OS=Brassica napus GN=BnaA02g06050D PE=4 SV=1[more]
F6GW79_VITVI7.3e-7681.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00780 PE=4 SV=... [more]
A5AHN7_VITVI7.3e-7681.71Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006074 PE=4 SV=1[more]
A0A0D2UIN6_GOSRA8.0e-7572.28Uncharacterized protein OS=Gossypium raimondii GN=B456_009G090000 PE=4 SV=1[more]
BLAST of Cp4.1LG20g07360 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22890.14.1e-7047.30 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G34370.21.2e-5863.87 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G34790.12.6e-2440.91 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G51220.11.4e-2240.00 WIP domain protein 5[more]
AT3G20880.11.2e-2139.31 WIP domain protein 4[more]
BLAST of Cp4.1LG20g07360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|985462825|ref|XP_015388772.1|1.8e-8863.95PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like isoform X2 [Citrus s... [more]
gi|657986722|ref|XP_008385495.1|1.9e-8558.30PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like isoform X2 [Malus do... [more]
gi|659071903|ref|XP_008462505.1|3.2e-8565.18PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Cucumis melo][more]
gi|449443590|ref|XP_004139560.1|3.6e-8487.73PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Cucumis sativus][more]
gi|700209755|gb|KGN64851.1|3.6e-8487.73hypothetical protein Csa_1G132120 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR015880Zinc finger, C2H2-like
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006826 iron ion transport
biological_process GO:0015706 nitrate transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010167 response to nitrate
biological_process GO:0044699 single-organism process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g07360.1Cp4.1LG20g07360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 107..127
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 105..132
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 105..131
score: 1.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 105..127
score: 0.0028coord: 196..218
score: 14.0coord: 158..191
score:
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 95..254
score: 1.6E
NoneNo IPR availablePANTHERPTHR10593:SF41SUBFAMILY NOT NAMEDcoord: 95..254
score: 1.6E
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 103..129
score: 2.2