CsGy1G014090 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCATAACCAAAGAGCTCAAACCGCTCTCCAATGGCCCTCTCTTTATCCCTACAACTCATTCGCTTCCCTCCTCAACCTCCATCCCCATCCTCTCACCTCGCCTCTCTCTCCCGCTTCTTCCCATCTCCATGTCTTTCCTCTTTCGCTCCGTCCCGAGACTACGCCGTCAAGTTATCTTCCAGAACAAAGTGTTTCTCCATGTCCACTGAGGAGGACAAGTGGAGTGAATCTGATGCGTTTGTCTCCGATGTCGACGAAGGGGGAGATCTTGAGGATGACATTGATATTAGTGTTCGGGAAGACAGCCCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCTTCACCCAGTGATTATCTCTCGCTTGCGATTCGTGAGCAGGTTTATGAGGTCTGTTTCTTTGATGCATTTTTCTATTTTTAGTTCATTTTGGATGTGTTTGCTGCTACTTTGAATTGCGTTCGATTGAAGTGGGGAATTTGACTCTCAAACCGGAAAATTTCAATCAAGTTCAGATAGCCTGTTCAAATGCCTAACTAATTATTTGATTCTTGAGGGAAATTAGCTGAGCAGTGTTGTGTCTACCAATGCCTAATCGTCGTTAGTTGCTAACTGGGGTCTTTTTTCTTTTTGTTGATGTTGAAGAACGTTTAAACGGGTTAATAGTAACTAACTGTAAGGTTCCTCGCATATGATGCTATGTTATAAAAGGTTTAGTATTAAAATTTTAAACGGTTGTAAGTGCTTCTAATCTTGTAGTAATTTAATGTTTCCTTCATTCATTTTTTAACATAAAAAACATTGGCACCATACAACTTTATTTTATTTTTTTTATTTTAAAGGAGGACAGATTCAAACCTCTTATCTTTAGAGCGAAGAAATGATGTAAAGTTATGACATTATATTGTTTTTTTGGATGAAAATAACACCTTTAATTGGAAAAGAATAAAAGAATACAAGTACATACAAAAAAAAACCAACCCAACAAAACACTTCATTCAAAAATAACCAAGTAAAATGTTGCCTATGCAATAATTATAGAAGCTCCTTGAAATCAAAGCTCAAAGGGACAGGTGAAATCTAAGCAAACAAATCTCACTAAGCCCTCTCTCCCTACCCTGAAAAACTCGATCGTTTCTCTCCTCCAAATGTCCCAAATAACAGCGCACACCCCGGCAAGCCATAAGAAACCCCTTTGTCACTTTGGTGACCATACGTACATTTGATTAGTTTAGAGAATAAATCATATAAAATAATCACTACACCCATCAAAGAAATAATACAAAGTAATTACTTTTGAGGGGTTCTACTTTTGCACTCTTCTTTGAGGTCACTATTTTTTTGGATATGAAAAAAGGTTCTGTTTGAAGGGCGGAACATTTAAATTTTTTTAGCTCAAGTTAAGACCTTGTGCTGTAATCCTTCCACCGGTTGGAGTTAATGGTTTGGAGGTAGGCTAGTTATAGTTTTGATTCCAAGATCAAATCTTTTCCTGTTAGAGATATATTTATGGGTTTCTTTCTTTGATAAAGGGAAGTTCTTACAGATGTTCATCTTTATTGACCACCTAGGTGTTAGAGGTTAAAGCTAATGGAACCGTATCCACCAGGAAGGTTAACAGACGGCAGCTGTTGAAGTCAAGTGGTGGGTAGATATTTCCAGAAAGTTCAGCTTCACATTTCAATGCTTAGTTTCTGGATTTATGCTGTTGAAAACTTTTAGCCTGCATTGACTTGTGAATACTTTCTTTTTTGGAATATCAATTACTACTGGATGATCACTGTTGTTTTTTCTGGATTCACACTGATAGATAACCTGGGATGACAAATAATATTACGACCTACTTTTTGTTAAGAAAATATATCTTGTCGTTTCATTATTTTCCTCTTGCTGATATATGTATTTTCTAATTGTCAGGGCTTCGTCCTCGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTACATTAATTTTCATCTTTTTTAATTTGTGGTCTTCTTTTTATGTTGAATAATTAGCATATGGGATAAACATATGAAATTAAGAAATTGAAGTCTATAAATAATACTCAGCAACAATTATATTTGTGGTTCACATCCCAGGTACGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCCATGCAGGATTGTGTCCTCATATTCGATCATAACCGGTATCCATCTGACTTGAAAATGGTGCCATGTTTATTTCTCATACAAAATTTCGATATTGCATTTCTTTTTGCATGATGGTGATCATCTTCAGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGGGTGCCAGCAATGCCATTTGAACTCGAGGTTAGTGATTCTTGTTAATATAATGCGTCTTTACATCATATAAATAGAGTTGGCAGATGAAAGCAAAATTATCTTACAAACTGTACTTCTGTAGCTCTCTACATCTAACAATAAGATGTTTCCTGGTTGGAATTTGGTCCCCGATAAGCTTACCCCTCAAAGCAAAGAAAAATTACCTCTAACTGCCTTTCAGCATTCTTATGTCATTCTGTGAATCCCAATGGAAATTGCTGAGAAGATCAGATGATTATTCTAAGAAGCAGGGACACGGATACGAGACACGAATACGACACAGAGACTGCGACATGCCATATTTTAACAATCCAGAATACGACACGTGAAGGGCGCGTTTTCTAAAATATTCATTTTAAAAATATATATAATTTTTATAGTAAAAGAAAATTCATAGTAAATGAATTGATGCATTTATATGCTTAAAAGACTTAGCTTAATGTATTCCACACTGAAAAATGAGAATATGTGTCTTTTTAGTCTACTCAACGAGTGTTCTATGCATGTCTAATACATTTGTTGCACTAATAAACGTCTGAAAGGTGTCTACCAAGTGTCAAAATGTCCAAGTGTTCAACTCATGTCGGATATGGACACGCTAGCCAAACTAAAGTGTCTGTGCTTCTTAGATTATTGTTAGCAGATAAGTGGAGATCAGCTTTTGGATTGGGATTTGTTCATATATTCTGACCTCAAAGGTTTTCAAATTAAAATCTGGCCTTGAGAGGTCAGTGAAGGTTCCAACCAATTCTGTAACTTACATTGAATAATATCTATGATGGAGGCCAGCCAATAAAATTTTATTAGATAACTGTTGAGGGGAAGACCTGAAAAAGCAGTGGGCCATTGTTCAATGTCACAACCTGCTACGGAGGCTGAACTTTTCACTACCAGATCATCTCTCGGCTCCTAATATCATTCTCATTCTCAGATTATTCTTCAGACCTGAGAAAGTCTAAAAAGCTTGATGATATTGAAGAGATTAACAAACTCATCTTCAAGAGCAATTGGAGAAGAATGGTACAAAATTTCATACAACCCTTGATCCAACCTTGGTTTTACATAAGTAATAATGGTCTTTTAATCTTCTGGTCTTAGCTCGTCATTGGCTTCTTCACTTCCACGATAGCGTTTACAGAATCTAAATAAACTACAACAAAGGCCTTTTCCAGGTCCAGTTTAACGTCTGCACCCTTCTTCTTCCTTATTCAAACATCAAGGAGTGCTGGACAAGAATCAATAATTTGTTTCTACCGGAAAAAGCTTACTGGTGTTCTATACTTGTGTATCATATAATCTTTTAGACATTTTAATAAAAACTTAGTGGGTAAGGCCACTCAGTTTGAACTAATTGCCTTTTTTGCATTGCACTTCATTAGATTAAGGAAACTGCACATCTCATTAATGCTCATTGCTCATGTCATTAATGTCGTTTTAGATAAGTCCGTGGAACAATTTCATTAACTTTTGCAGAAGAATGTTCACCCTTTTCTGAAGAATGCTGCTGTTAAACAGTCTAGCCGCTAG TCATAACCAAAGAGCTCAAACCGCTCTCCAATGGCCCTCTCTTTATCCCTACAACTCATTCGCTTCCCTCCTCAACCTCCATCCCCATCCTCTCACCTCGCCTCTCTCTCCCGCTTCTTCCCATCTCCATGTCTTTCCTCTTTCGCTCCGTCCCGAGACTACGCCGTCAAGTTATCTTCCAGAACAAAGTGTTTCTCCATGTCCACTGAGGAGGACAAGTGGAGTGAATCTGATGCGTTTGTCTCCGATGTCGACGAAGGGGGAGATCTTGAGGATGACATTGATATTAGTGTTCGGGAAGACAGCCCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCTTCACCCAGTGATTATCTCTCGCTTGCGATTCGTGAGCAGGTTTATGAGCTCAAGTTAAGACCTTGTGCTGTAATCCTTCCACCGGTTGGAGTTAATGGTTTGGAGGTGTTAGAGGTTAAAGCTAATGGAACCGTATCCACCAGGAAGGTTAACAGACGGCAGCTGTTGAAGTCAAGTGGGCTTCGTCCTCGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTACGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCCATGCAGGATTGTGTCCTCATATTCGATCATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGGGTGCCAGCAATGCCATTTGAACTCGAGAAGAATGTTCACCCTTTTCTGAAGAATGCTGCTGTTAAACAGTCTAGCCGCTAG ATGGCCCTCTCTTTATCCCTACAACTCATTCGCTTCCCTCCTCAACCTCCATCCCCATCCTCTCACCTCGCCTCTCTCTCCCGCTTCTTCCCATCTCCATGTCTTTCCTCTTTCGCTCCGTCCCGAGACTACGCCGTCAAGTTATCTTCCAGAACAAAGTGTTTCTCCATGTCCACTGAGGAGGACAAGTGGAGTGAATCTGATGCGTTTGTCTCCGATGTCGACGAAGGGGGAGATCTTGAGGATGACATTGATATTAGTGTTCGGGAAGACAGCCCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCTTCACCCAGTGATTATCTCTCGCTTGCGATTCGTGAGCAGGTTTATGAGCTCAAGTTAAGACCTTGTGCTGTAATCCTTCCACCGGTTGGAGTTAATGGTTTGGAGGTGTTAGAGGTTAAAGCTAATGGAACCGTATCCACCAGGAAGGTTAACAGACGGCAGCTGTTGAAGTCAAGTGGGCTTCGTCCTCGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTACGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCCATGCAGGATTGTGTCCTCATATTCGATCATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGGGTGCCAGCAATGCCATTTGAACTCGAGAAGAATGTTCACCCTTTTCTGAAGAATGCTGCTGTTAAACAGTCTAGCCGCTAG MALSLSLQLIRFPPQPPSPSSHLASLSRFFPSPCLSSFAPSRDYAVKLSSRTKCFSMSTEEDKWSESDAFVSDVDEGGDLEDDIDISVREDSPVATAASAQRISSSPSDYLSLAIREQVYELKLRPCAVILPPVGVNGLEVLEVKANGTVSTRKVNRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDHNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEKNVHPFLKNAAVKQSSR
BLAST of CsGy1G014090 vs. NCBI nr
Match: XP_008462287.1 (PREDICTED: LOW QUALITY PROTEIN: magnesium transporter MRS2-11, chloroplastic [Cucumis melo]) HSP 1 Score: 350.5 bits (898), Expect = 4.9e-93 Identity = 201/257 (78.21%), Postives = 208/257 (80.93%), Query Frame = 0
BLAST of CsGy1G014090 vs. NCBI nr
Match: XP_022964732.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 323.6 bits (828), Expect = 6.4e-85 Identity = 190/254 (74.80%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of CsGy1G014090 vs. NCBI nr
Match: XP_022964826.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 323.6 bits (828), Expect = 6.4e-85 Identity = 190/254 (74.80%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of CsGy1G014090 vs. NCBI nr
Match: XP_023519709.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.2 bits (827), Expect = 8.4e-85 Identity = 190/254 (74.80%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of CsGy1G014090 vs. NCBI nr
Match: XP_023538322.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 321.2 bits (822), Expect = 3.2e-84 Identity = 183/254 (72.05%), Postives = 203/254 (79.92%), Query Frame = 0
BLAST of CsGy1G014090 vs. TAIR10
Match: AT5G22830.1 (magnesium (Mg) transporter 10) HSP 1 Score: 171.4 bits (433), Expect = 7.4e-43 Identity = 113/241 (46.89%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of CsGy1G014090 vs. TAIR10
Match: AT3G19640.1 (magnesium transporter 4) HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05 Identity = 27/90 (30.00%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of CsGy1G014090 vs. Swiss-Prot
Match: sp|B8APK3|MRS2A_ORYSI (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-A PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41 Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of CsGy1G014090 vs. Swiss-Prot
Match: sp|Q9AUK4|MRS2A_ORYSJ (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-A PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41 Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of CsGy1G014090 vs. Swiss-Prot
Match: sp|Q058N4|MRS2B_ARATH (Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRS2-11 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41 Identity = 113/241 (46.89%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of CsGy1G014090 vs. Swiss-Prot
Match: sp|Q7SFQ9|MRS2_NEUCR (Mitochondrial inner membrane magnesium transporter mrs2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrs2 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of CsGy1G014090 vs. Swiss-Prot
Match: sp|Q6C8H7|LPE10_YARLI (Mitochondrial inner membrane magnesium transporter LPE10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=LPE10 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.2e-07 Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of CsGy1G014090 vs. TrEMBL
Match: tr|A0A1S3CI47|A0A1S3CI47_CUCME (LOW QUALITY PROTEIN: magnesium transporter MRS2-11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500679 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 3.3e-93 Identity = 201/257 (78.21%), Postives = 208/257 (80.93%), Query Frame = 0
BLAST of CsGy1G014090 vs. TrEMBL
Match: tr|A0A0A0L1G8|A0A0A0L1G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G209330 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 9.6e-61 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsGy1G014090 vs. TrEMBL
Match: tr|A0A2K1Z8A4|A0A2K1Z8A4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G151400v3 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53 Identity = 140/254 (55.12%), Postives = 164/254 (64.57%), Query Frame = 0
BLAST of CsGy1G014090 vs. TrEMBL
Match: tr|A0A2K1Z882|A0A2K1Z882_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G151400v3 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53 Identity = 140/254 (55.12%), Postives = 164/254 (64.57%), Query Frame = 0
BLAST of CsGy1G014090 vs. TrEMBL
Match: tr|A0A2K1Z886|A0A2K1Z886_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G151400v3 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53 Identity = 140/254 (55.12%), Postives = 164/254 (64.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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