CsGy1G013960 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G013960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionHistone H2B
LocationChr1 : 9592247 .. 9593566 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGCTCTTAGATTCATAGATTTTAGGGTTTTCTCGTGTAAAAAAGCAGGATCACTGTTCTGGATCGTTGATTTCTTTTGCTCTTGTTGCATATTTTGGAATTGAATGAATGAAAATCGGTTTACATGATTCTAATTCTTTTGTTAATTGCTTGGTCATGTCCTCATCGTTCAGATTGTTTGCTGGGCGGTCTCTGAAGATTTACCATAATTTCACCTTAACAAATTTGTATGCCTGAGACTGAGTCTGACTTCAACTAGTATTTTGAGTTTGTTGCTTTTCAATTGTCCAGGCAGAAGGTATTGATTCAATGCCGTTGAATATGCTTCAAATTTTTCCTCTTAGTTCGAGTTCTAGGGTGAATAATTTTTTATTTATGTTTTGAAGATGCCTGTGAAAATGATTGTACAAACTGTAGATTTCTGTGTTTTTAATGGGAACTTTTCATTGTGGGGTTTCTACAATTTCTTGGACAATGATTTCTGTGTCCCTTATGTTTGGTATCTTCAATTTGGTATCAGGGTGTTGAATCCATAGGCATAAATCTTGAATCCAACCCCATTTTATTGATTAGTGGTTAAAGTTGTCATCCACGGGTGATGTTCTGAGTTAATTCAACACGTTGGAGAATTTTCAACCAATAAACAGTCCCATCAATCCACAGGTTAAGCTTCACATTGTGGCCATTTCTGAGCATCTATTGTTTGAGAATGAAAAATTATTGCTTTCCTTTTTACCTTTGGATGATTTTGAGTTTAGGCAAGGGAGATCTAAGTGCTTTTTGTCCTTTTTACCTTAGAATGAAAAATTATTGCTTTCCTACTCTGTCTCAAGGCCTCCTCTTTGTTTGACCAGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTAG

mRNA sequence

ATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTAG

Coding sequence (CDS)

ATGGCGCCAAAGGCCGAGAAGAAGCCCGCCGAGAAAAAGCCAGCGGCGGAGGAGAAGAAGGCCGAGAAAACTCCGGCCGAGAAGAAGCCAAGAGCCGAGAAGAAGCTTCCCAAAGACGCCTCCGATAAGAAGAAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTTGTTCTTCCTGGTGAGCTGGCTAAACACGCTGTCTCTGAGGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTAG

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEDENGWERADATTPPR
Homology
[Close]
BLAST of CsGy1G013960 vs. NCBI nr
Match: XP_004139453.1 (PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. NCBI nr
Match: XP_011654070.1 (PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2B.7 [Cucumis sativus] >KGN64852.1 Histone H2B [Cucumis sativus] >KGN64854.1 Histone H2B [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. NCBI nr
Match: XP_016903018.1 (PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. NCBI nr
Match: XP_022152883.1 (histone H2B.7 [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. NCBI nr
Match: XP_022964641.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucurbita maxima] >XP_023519436.1 histone H2B.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-38
Identity = 118/131 (90.08%), Postives = 119/131 (90.84%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEK P          XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKAP----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 121

[Close]
BLAST of CsGy1G013960 vs. TAIR10
Match: AT1G07790.1 (Histone superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 119 QTAVRLVLPGELAKHAVSE 137

[Close]
BLAST of CsGy1G013960 vs. TAIR10
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-38
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 62  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 121

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 122 QTAVRLVLPGELAKHAVSE 140

[Close]
BLAST of CsGy1G013960 vs. TAIR10
Match: AT5G59910.1 (Histone superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-38
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 121 QTAVRLVLPGELAKHAVSE 139

[Close]
BLAST of CsGy1G013960 vs. TAIR10
Match: AT3G46030.1 (Histone superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-37
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 56  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 115

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 116 QTAVRLVLPGELAKHAVSE 134

[Close]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match: sp|Q9LZ45|H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana OX=3702 GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 156.4 bits (394), Expect = 2.5e-37
Identity = 118/131 (90.08%), Postives = 119/131 (90.84%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEK P          XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKAP----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 121

[Close]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match: sp|Q9LQQ4|H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 155.2 bits (391), Expect = 5.5e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 119 QTAVRLVLPGELAKHAVSE 137

[Close]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 121 QTAVRLVLPGELAKHAVSE 139

[Close]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match: sp|Q1S9I9|H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 53  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 112
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREI
Sbjct: 59  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 118

Query: 113 QTAVRLVLPGELAKHAVSE 132
           QTAVRLVLPGELAKHAVSE
Sbjct: 119 QTAVRLVLPGELAKHAVSE 137

[Close]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match: sp|A2XF66|H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_010709 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-36
Identity = 108/141 (76.60%), Postives = 112/141 (79.43%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAA----------EEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAPKAEKKPAEKKPAA            XXXXXXXXXXXXXXXXXX              
Sbjct: 1   MAPKAEKKPAEKKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGDKKGRKKAKK 60

Query: 61  XXETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
             ETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE+++LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSE 132
           EIQT+VRLVLPGELAKHAVSE
Sbjct: 121 EIQTSVRLVLPGELAKHAVSE 141

[Close]
BLAST of CsGy1G013960 vs. TrEMBL
Match: tr|A0A0A0LV55|A0A0A0LV55_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. TrEMBL
Match: tr|A0A1S4E463|A0A1S4E463_CUCME (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. TrEMBL
Match: tr|A0A0A0LST8|A0A0A0LST8_CUCSA (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.0e-40
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. TrEMBL
Match: tr|A0A2G3CVJ9|A0A2G3CVJ9_CAPCH (Histone H2B OS=Capsicum chinense OX=80379 GN=BC332_07861 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.1e-37
Identity = 112/131 (85.50%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPK EKKPAEKKPAA  XXXXXXXXXXXXXXXXXXXX              ETYKIYIF
Sbjct: 1   MAPKVEKKPAEKKPAAXXXXXXXXXXXXXXXXXXXXXXGAAGDKKKRVKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LAR NKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

[Close]
BLAST of CsGy1G013960 vs. TrEMBL
Match: tr|A0A2G2ZYA2|A0A2G2ZYA2_CAPAN (Histone H2B OS=Capsicum annuum OX=4072 GN=LOC107863599 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.1e-37
Identity = 112/131 (85.50%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 1   MAPKAEKKPAEKKPAAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETYKIYIF 60
           MAPK EKKPAEKKPAA  XXXXXXXXXXXXXXXXXXXX              ETYKIYIF
Sbjct: 1   MAPKVEKKPAEKKPAAXXXXXXXXXXXXXXXXXXXXXXGAAGDKKKRVKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LAR NKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSE 132
           PGELAKHAVSE
Sbjct: 121 PGELAKHAVSE 131

The following BLAST results are available for this feature:
BLAST of CsGy1G013960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139453.14.6e-40100.00PREDICTED: histone H2B.7-like [Cucumis sativus] >KGN64858.1 Histone H2B [Cucumis... [more]
XP_011654070.14.6e-40100.00PREDICTED: histone H2B.7 [Cucumis sativus] >XP_011654073.1 PREDICTED: histone H2... [more]
XP_016903018.14.6e-40100.00PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo][more]
XP_022152883.14.6e-40100.00histone H2B.7 [Momordica charantia][more]
XP_022964641.14.6e-40100.00histone H2B.7-like [Cucurbita moschata] >XP_022970349.1 histone H2B.7-like [Cucu... [more]
BLAST of CsGy1G013960 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02570.11.4e-3890.08Histone superfamily protein[more]
AT1G07790.13.0e-38100.00Histone superfamily protein[more]
AT2G28720.16.8e-3898.73Histone superfamily protein[more]
AT5G59910.16.8e-3898.73Histone superfamily protein[more]
AT3G46030.11.2e-3798.73Histone superfamily protein[more]
BLAST of CsGy1G013960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LZ45|H2B9_ARATH2.5e-3790.08Histone H2B.9 OS=Arabidopsis thaliana OX=3702 GN=At5g02570 PE=1 SV=3[more]
sp|Q9LQQ4|H2B1_ARATH5.5e-37100.00Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3[more]
sp|P40283|H2B11_ARATH1.2e-3698.73Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
sp|Q1S9I9|H2B1_MEDTR1.2e-3698.73Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
sp|A2XF66|H2B1_ORYSI1.2e-3676.60Histone H2B.1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_010709 PE=3 SV=1[more]
BLAST of CsGy1G013960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LV55|A0A0A0LV55_CUCSA3.0e-40100.00Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1[more]
tr|A0A1S4E463|A0A1S4E463_CUCME3.0e-40100.00Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500805 PE=3 SV=1[more]
tr|A0A0A0LST8|A0A0A0LST8_CUCSA3.0e-40100.00Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132680 PE=3 SV=1[more]
tr|A0A2G3CVJ9|A0A2G3CVJ9_CAPCH4.1e-3785.50Histone H2B OS=Capsicum chinense OX=80379 GN=BC332_07861 PE=3 SV=1[more]
tr|A0A2G2ZYA2|A0A2G2ZYA2_CAPAN4.1e-3785.50Histone H2B OS=Capsicum annuum OX=4072 GN=LOC107863599 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR000558Histone_H2B
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013960.1CsGy1G013960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 55..73
score: 80.55
coord: 74..94
score: 75.74
coord: 126..139
score: 42.38
coord: 96..113
score: 76.51
coord: 113..126
score: 92.45
IPR000558Histone H2BSMARTSM00427h2b3coord: 45..141
e-value: 7.9E-63
score: 224.7
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 1..132
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 6..118
e-value: 3.4E-22
score: 79.1
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 2..139
e-value: 8.1E-51
score: 173.2
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 27..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR23428:SF97HISTONE H2B.11-RELATEDcoord: 1..132

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G013960CmaCh12G008130Cucurbita maxima (Rimu)cgybcmaB058
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G013960Wax gourdcgybwgoB046
CsGy1G013960Cucurbita maxima (Rimu)cgybcmaB061
CsGy1G013960Cucurbita moschata (Rifu)cgybcmoB054
CsGy1G013960Cucurbita moschata (Rifu)cgybcmoB057
CsGy1G013960Cucurbita pepo (Zucchini)cgybcpeB082
CsGy1G013960Cucurbita pepo (Zucchini)cgybcpeB142
CsGy1G013960Cucumber (Chinese Long) v2cgybcuB001
CsGy1G013960Bottle gourd (USVL1VR-Ls)cgyblsiB041
CsGy1G013960Melon (DHL92) v3.5.1cgybmeB010
CsGy1G013960Melon (DHL92) v3.6.1cgybmedB009
CsGy1G013960Watermelon (Charleston Gray)cgybwcgB014
CsGy1G013960Watermelon (97103) v1cgybwmB054
CsGy1G013960Wild cucumber (PI 183967)cgybcpiB001
CsGy1G013960Silver-seed gourdcarcgybB0180
CsGy1G013960Cucumber (Chinese Long) v3cgybcucB002
CsGy1G013960Watermelon (97103) v2cgybwmbB003