CsGy1G012390 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAAAGTATGTTCTGCTGGAGTGTACACAAAAAAATTAGGGCTGAGGTGTTATGCTGATGTATTAACTAAATTTGTTGGCTTCTGACTAGATACAAGCCCTGAAGGTCCGCCAGCAATTTGCTCTAACCAGATGCACCTTTGTGAAGGTAATTGTTGGACACGTTTTTGTAATAACATTTTCTCTCTTACTCTGGCTTACAAGTTATTCGTGCATTAGGGTTGCCTAAACTTTTACAGAGCGTTGCAATATGAATTATAACCTATGTTAGTATGAAAGGACTTTAAACATTTCACATTTGTTCCAAATAATTTCACGTGTAGGCTTTATTGAATGTTCATCTTGTTTATAGTTGGTGAACACGCGTTTTGCCAATCAACTTCAGAAGGCCTTTCAGACGTTGAACCATCATGTTTTCAGCAAAGTTCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATTACTTCCAAAGAGTCTATGAAGAAGCCAAAAAGTATCACCACGAGGTATGTGTATTTGTCAATGGAAAGCTTAATCTAATAATTTCTGCAAAGACGCATGGGAATAAAACGTTGCTCGCCATATAGATTTTTGTAAATTGTGCTACCTCCATGCTCTCCATCTTTTAATCTTTGATTTGACATTTGCATTTCTTATACCAGAATATAGATATTGCTGTGGAATATGCATTGCCAATCGCATCTATATGCCTCTTCCTAGTGACTATATAAAGTTTGAATGTTGATATCTGCAGTTGCAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCTGCACATCTTGCCAACCCGGAATTGATTTTCTTTTTGGTAAGCCCGACAAAAACCATGACATTGACTCTTCATTTAGAACTCTCTCCTTTTTTTTTCTACTTTCAGAATGTAATCATGTTTTCTGGATTTTTAGGCGTCTGCTCTTGCTATCTTCCCAATTTTTGGTGCTTGGATGTTCCTCTCTTCGTGGTTTTCC ATGTCCAAAATACAAGCCCTGAAGGTCCGCCAGCAATTTGCTCTAACCAGATGCACCTTTGTGAAGTTGGTGAACACGCGTTTTGCCAATCAACTTCAGAAGGCCTTTCAGACGTTGAACCATCATGTTTTCAGCAAAGTTCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATTACTTCCAAAGAGTCTATGAAGAAGCCAAAAAGTATCACCACGAGTTGCAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCTGCACATCTTGCCAACCCGGAATTGATTTTCTTTTTGGCGTCTGCTCTTGCTATCTTCCCAATTTTTGGTGCTTGGATGTTCCTCTCTTCGTGGTTTTCC ATGTCCAAAATACAAGCCCTGAAGGTCCGCCAGCAATTTGCTCTAACCAGATGCACCTTTGTGAAGTTGGTGAACACGCGTTTTGCCAATCAACTTCAGAAGGCCTTTCAGACGTTGAACCATCATGTTTTCAGCAAAGTTCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATTACTTCCAAAGAGTCTATGAAGAAGCCAAAAAGTATCACCACGAGTTGCAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCTGCACATCTTGCCAACCCGGAATTGATTTTCTTTTTGGCGTCTGCTCTTGCTATCTTCCCAATTTTTGGTGCTTGGATGTTCCTCTCTTCGTGGTTTTCC MSKIQALKVRQQFALTRCTFVKLVNTRFANQLQKAFQTLNHHVFSKVPTLSSRVTGAIHYFQRVYEEAKKYHHELQRLIKQEMERNEYAAHLANPELIFFLASALAIFPIFGAWMFLSSWFS
BLAST of CsGy1G012390 vs. NCBI nr
Match: XP_004146617.1 (PREDICTED: uncharacterized protein LOC101213056 isoform X1 [Cucumis sativus] >KGN64703.1 hypothetical protein Csa_1G075570 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of CsGy1G012390 vs. NCBI nr
Match: XP_011653316.1 (PREDICTED: uncharacterized protein LOC101213056 isoform X2 [Cucumis sativus]) HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of CsGy1G012390 vs. NCBI nr
Match: XP_008465616.1 (PREDICTED: uncharacterized protein LOC103503257, partial [Cucumis melo]) HSP 1 Score: 220.7 bits (561), Expect = 2.7e-54 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CsGy1G012390 vs. NCBI nr
Match: XP_022955165.1 (uncharacterized protein LOC111457212 [Cucurbita moschata] >XP_022955166.1 uncharacterized protein LOC111457212 [Cucurbita moschata]) HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47 Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of CsGy1G012390 vs. NCBI nr
Match: XP_023542864.1 (uncharacterized protein LOC111802657 [Cucurbita pepo subsp. pepo] >XP_023542865.1 uncharacterized protein LOC111802657 [Cucurbita pepo subsp. pepo] >XP_023542866.1 uncharacterized protein LOC111802657 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47 Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of CsGy1G012390 vs. TAIR10
Match: AT1G28410.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of CsGy1G012390 vs. TAIR10
Match: AT4G31340.1 (myosin heavy chain-related) HSP 1 Score: 40.4 bits (93), Expect = 9.1e-04 Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of CsGy1G012390 vs. TrEMBL
Match: tr|A0A0A0LSE6|A0A0A0LSE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075570 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of CsGy1G012390 vs. TrEMBL
Match: tr|A0A1S3CPP0|A0A1S3CPP0_CUCME (uncharacterized protein LOC103503257 OS=Cucumis melo OX=3656 GN=LOC103503257 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CsGy1G012390 vs. TrEMBL
Match: tr|A0A2P4LRY7|A0A2P4LRY7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17768 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26 Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of CsGy1G012390 vs. TrEMBL
Match: tr|D7TJD6|D7TJD6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g00240 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.3e-24 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of CsGy1G012390 vs. TrEMBL
Match: tr|A5AJH7|A5AJH7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_005069 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.9e-22 Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |