CmaCh18G003900 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATCATCATTAAGATTTTCATCGTCCAACGTCTCTTCTCAAATAAAGTACGTCTATTCTTAATCGAGATTCGACTTCTTTCTCTTTTGAGTCTTTGTTAGATATTTGAGAATTTACCGATCTATTGACATTACTAAGTTTAGGCATACCCTTTAGTACCAGCTCTGGCTTTGAGATAGTATTATAATTTAATATTTTTCTAATTTAAATTTCATAACTTTTAATTAAAAAATTTATTAAAAAAACTTTATTTATTAATCAAAGATTATTTAAAAAACAAAATTTTAAAATAATAATATTACATAAAAAATTATAATTTTAATAACATTTATAAAAAATAAATAATTAATATTGATTATTATTATTATTATTATTATTTATAGAGGAAATGATTTGCAGGGTGGCTCGACGTTGCAGAAGAGTTTTTGTGTGAAAGCTCTGCATAAATGGCGGCTCATCCCATTAAGATCTTGTATCTCTTTCCCGCCTTATTCTTACCTCTCTTCGCTGTTTGCGAAATCGCTTCGTTCGCTCGTTCAAGTAACGATGTGTTGATCGATGATTTGCTGGAAATCAAGCTCAGGATCTCTCGCTTAGGTGCATATTGTTTACTGTTTTCATTTCACATGACATTGAGAGGTTTTTAATTCTTCATATGATTTAGCTAATTCTAGTGTCTGTCAATCTAGACTTTAGGCGTTGCATTTATTACGTAAGTTTTCTGTGGTGTCGCTATCTTTTACTTAATAAAATCGAATGCAGAATCCGTTCTGGAGGGAAGCAAGCAAAATTTAACCGAGAAAGGCAATGAAATTTTGGCGCAGGAAAGGTTAATTGAGGCTATGTCTCATAAGATTCAATACTTGGAGTCTGCTCTATTTGATATGAAGGTTTGATTCGTGCATTATAATCAAGAAAGTGTTGCTTCATCTGTGCATTTTCAGAGATTCATTCTGTCTCTTGTTTTTTGATATTTTTCGTACATCAGAATATGTTTGATGTGTTCAATTACAGACTTTGGAGTGGGCTATTAGCCATTCACACGTCCGAATTTACTAAATGATTGCAAAATATTGTCTGATTATAGGTTAAGTTTTCTGTTTCAACAATTGCTTGTCAATAGGGAGAAAATTTACAGTCAGACATCACCTGAATCTTTAATTCTTTGAGGAAATGTCGAAATTTAGTATTGAGACTGATATTAGTTTAGTTATTTTGCAGAGGAAAACATTAAGTCACGATGAAAGGATTGCTTCTCTGGAGGATGAGGTTTCTTTCTACTTTTTCCTATTTAATTTTTTTATTTGAAAAGTTGCATCGGGAGATTTTCTGGTCCAGGAAACAGTTATCTGGTAAATTTTGTTGAGTTACTTTCAAAGGTTCAATTGATCCGTGTAGTTGGCTTGGGCATGTTAGGTACGACTTCTCTGGGCTGTATTAAGAAAGAACAACTTTGATATTCATCTTTTGGAAGTCAAGGTACATGAAGCTGAGGAAAAACTTGAAGAGGTTACCTCACAAGTTGAGAAGGTATAAATTTAGACTAGGGGTTTTTTTACTTTTCATAGCAGACATCGTTTGAATGTTTCGCGCAACATGCTCACATATTTGTCATGGAAAATGTATAAAACTAAGACAAATATTTTATTATTATGTTCCATGTTTATGTGACACAATATATATAATTTTTTTTTTTTTTTGGCCTATACACTGTGGTATCTAGTAGATTCCCTTGTCATGCAATGATAATTGTAGATTTAGCCAGACACTTTCGTTTGCCTAGCGTGTCCTTGTCTGATACGAGTTGGCACTTGGACACTCCTAACACTTTTTTGGATACATCTTAGACACTTATTAGCACAAAAGATGTATTAGACACTAGTTTTACAAAGCCAATATAGGTCAACATTTATTAGACACGTATCAAACTCTTGTTAACTATACTCTATAGTTTGAGAGTGAAATACATCAAACTCATATTTTTCAGCATATAAATTTGTGAACTTTGAATTTCTTTGTGTAGAAATGACTTGTCCTTGCCATGTCCGTGTGCTAAATTTTAAAAAATAACGTGTCAATTTGAATGCATGCTTCTTAAATTGAAGACAATAAAAAATGAGAAATCCTTCGACATCCTACATTTTTGAAGTTTTTCATGTTTTCCTACCATTAGTTCACGATTTACCTAACGGAAGAAATGCGGGGGATGCACTTGTAAATGTTCTGGACTCTGATTGAGAATGAGTTCATTTCTCTTTATAATTAACATATCTTCTCCTCAATCAACTTATATCCATGGATAAAATGTCTCTTTATGCAAACATTCCTTTGTTAGTGTGCTTACTTTGTGACCATTTTATTTTCCAGATGTCTAGCATAGTATCTGAACAGTGGATTCATATTCGGCATCTAGAGCAGGCCCTTGAAATAACAAAAGTATGTGTTACGGGAGTGGGATCAATGATTGAAAATTTTATTGTTGAGCTGTTGTGCTGGTGTATAAACTAACTTTATTGGCGTGTGACTAGATAAATGCTTTGAAGGTCCGCCAGCAAGTTGCCCTAACCAGATGCACCTTTTTAAAGGTAATTTTTTGACAAGCCTGGTCGAACATTTTCTTGTCATTCACTCTGGCTCACCCGTGCATTATTTGTTGGCTGCACCTTCATAGAGTGCTGCACTATAAGTTATAGCCAATGTTAGAATCAAATAACGTTAACCATTTTAGATTTTTTCCAAATAATTTCACTTGTAAGCTTTATCAAATGTTTAATTTTGTTTATAGTTGGTCAACACACGTTTTATCAATCAACTTCAGAAGGCCCTACAGACATTGAACTATCATCTGTTCAGCAAAGTGCCTACCTTGAGTTCCATGGTTACAGGAGCCATCCAATACTTCCAAGGAGTCTATGAAGAAGCCACAAAGTATCACCATGAGGTATGTGTTTGTGAACGGAAAGATTAAAGTCAATCTAATAACTTCTGCAAAGACATGGGAACGAAACCAATGGCCCACCGTATAATTCTTTTAGAATTTTTTACCTCCATCCCTTGATCTTTGACATTTGTATATCATACGGGAATATAATTGTTTCAGCTGAATATGCATTGCCAATCTCAGCTATATCTCTTCGTCATAATGACTATAAAGTTTGAATATTCATATCTGCAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAGGGACTATGCAGCATATCTTGTAAACAGGGAAGTTATTTTCTTTCTGGTAAGCTGCAAAAATCTCGATGCTTCATCTTGAATCTCTTGCCTGTTTTTCTGCGTACTTGCATAATCTAATCATGTTTTTTTATGGATTTTTAGGCGTCTGCTATAGTTACCTTCCCAATTTTTGGTGCTTGGATGTTCCTTTCTTCATGGTTTTCCAGGTGAAAGGGTTATCCGTGAGAAAAGAGGGCTAGGTTATACTCGAGAACCTTTTTTTTTCATGACTATCCTGATAGTTTCGCTTAGCCTGGAGATCAGTTTTCCAATATTAGATGTGAATTCCTTCATGAACAAGTCTGTATATAGTTGCAACTTTTAGCATTCAAATGAAATATTCATACTGTGTTAAAAGTCAAGTTTTTTGTTGCATAACACTTCATATAAATATACATGAAAAAGAAAATGCTGGATAACAGAACTGATGAGTATCAATTCCCACAAAATGCATAGATTTATAATGGGGGACTATATAGTTGGGCAACCAGATATGAAAGAAAGCTGTGGCACCAGAAATTCTCACCCCCAAAAAATTGTTCCAAAAAATGCTTAATACAGCAGAGATTTACATTCTAAAAATACTGTTTGTTTCACTATGAAATAAGAATGGTGTTTTGTGGCTGACTATATAGGAATAATATACAAAACACATTTACATCAGAAAAATAGTTGTCTACTCACTGCTTAGTTTTCTCTTTATCAGATCATAGAATCCTCTGACAATATGGTTAACAATGAGTATTTCACTTTGATAGAGATCCGGGCACCTTCAACACAAAGCTTGGCTCCAGTGACCACCCAGTATCCAGGTGAGTTCTCAGGGCCACGCACCATTTCTTTCGTATCGATGATGTTCAACATTTTCATTGCTCTCACAGTCAAAGGCGGACCATCGGGATAAACAGCCGAGTTCAATTCAATTTTTGGTTGCGCTTCTGGCTGCTGCAGCCCTGTACTAAACCTTGTGCTGATAAAGGTGGATATGAGTCCAGATTTTCGGGATGACGTTGAAGGTCCTTCCCATTCTGATCGACGAATCATTGCTGATGCCACCGTCGAAAACCCAAGCCTCAGGAACAATACCTTTCTCATTCCAATAACCTTAACTTCAAACCAAGCCTTTGTGACGATAGAAGCAGTGTCGTCATCAATTAGTGAACCATTGTACTGCACTGGAGCAGTGCAGACATGTGAAAATATGCTCCATTTAACTGGTTGGAAGTAGCCCTTCTCCTCTGGCTCGTCAATGGGTCCATAACTCAGATCATCTGAGAGTTGGAGAGTCTTGGGAAGAGTTGATAGATGCTGAAGATGAATTGCAAGATGGTCACTTTTCTTTCCTTCCAGAAACAACCGAACTCCCGTTACTGGACGACTGTTCGAATCAACCTGCAGTTGCAAAATTGTGATTATCACGTGTTCAATCTCGGCATCGCCATTTTGACAAATCCGTCTTCAAGTCAGAAGATTACCTTAGTAGTATTTACATACAGCTTGGGGCCCATCAAAGTGAACTTCAGAGATGGAGAGGCTTGTTTCCTATGCCGAGTAGCAAGAGGAAGATCGGCGTACACCGGTGCCCATTGTCGAGGCAGCTGAAATTCCAGAAACTGCTGAAGCTCCTCAATTGGAGGTTTATCTGCACAAATTTTCAATGATCAAAATCTATCACTAATGGTAAATTCAATGTGAATTAGAACTCTTGCTGGCTTGAATCTGGTGTCAACATTTTAATGGCTTCTCAAGTACTAAG ATCATCATCATTAAGATTTTCATCGTCCAACGTCTCTTCTCAAATAAAGGTGGCTCGACGTTGCAGAAGAGTTTTTGTGTGAAAGCTCTGCATAAATGGCGGCTCATCCCATTAAGATCTTGTATCTCTTTCCCGCCTTATTCTTACCTCTCTTCGCTGTTTGCGAAATCGCTTCGTTCGCTCGTTCAAGTAACGATGTGTTGATCGATGATTTGCTGGAAATCAAGCTCAGGATCTCTCGCTTAGAATCCGTTCTGGAGGGAAGCAAGCAAAATTTAACCGAGAAAGGCAATGAAATTTTGGCGCAGGAAAGGTTAATTGAGGCTATGTCTCATAAGATTCAATACTTGGAGTCTGCTCTATTTGATATGAAGAGGAAAACATTAAGTCACGATGAAAGGATTGCTTCTCTGGAGGATGAGGTACGACTTCTCTGGGCTGTATTAAGAAAGAACAACTTTGATATTCATCTTTTGGAAGTCAAGGTACATGAAGCTGAGGAAAAACTTGAAGAGGTTACCTCACAAGTTGAGAAGATGTCTAGCATAGTATCTGAACAGTGGATTCATATTCGGCATCTAGAGCAGGCCCTTGAAATAACAAAAATAAATGCTTTGAAGGTCCGCCAGCAAGTTGCCCTAACCAGATGCACCTTTTTAAAGTTGGTCAACACACGTTTTATCAATCAACTTCAGAAGGCCCTACAGACATTGAACTATCATCTGTTCAGCAAAGTGCCTACCTTGAGTTCCATGGTTACAGGAGCCATCCAATACTTCCAAGGAGTCTATGAAGAAGCCACAAAGTATCACCATGAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAGGGACTATGCAGCATATCTTGTAAACAGGGAAGTTATTTTCTTTCTGGCGTCTGCTATAGTTACCTTCCCAATTTTTGGTGCTTGGATGTTCCTTTCTTCATGGTTTTCCAGGTGAAAGGGTTATCCGTGAGAAAAGAGGGCTAGAGATCCGGGCACCTTCAACACAAAGCTTGGCTCCAGTGACCACCCAGTATCCAGTCAAAGGCGGACCATCGGGATAAACAGCCGAGTTCAATTCAATTTTTGGTTGCGCTTCTGGCTGCTGCAGCCCTGTACTAAACCTTGTGCTGATAAAGGTGGATATGAGTCCAGATTTTCGGGATGACGTTGAAGGTCCTTCCCATTCTGATCGACGAATCATTGCTGATGCCACCGTCGAAAACCCAAGCCTCAGGAACAATACCTTTCTCATTCCAATAACCTTAACTTCAAACCAAGCCTTTGTGACGATAGAAGCAGTGTCGTCATCAATTAGTGAACCATTGTACTGCACTGGAGCAGTGCAGACATGTGAAAATATGCTCCATTTAACTGGTTGGAAGTAGCCCTTCTCCTCTGGCTCGTCAATGGGTCCATAACTCAGATCATCTGAGAGTTGGAGAGTCTTGGGAAGAGTTGATAGATGCTGAAGATGAATTGCAAGATGGTCACTTTTCTTTCCTTCCAGAAACAACCGAACTCCCGTTACTGGACGACTGTTCGAATCAACCTGCAGTTGCAAAATTGTGATTATCACGTGTTCAATCTCGGCATCGCCATTTTGACAAATCCGTCTTCAAGTCAGAAGATTACCTTAGTAGTATTTACATACAGCTTGGGGCCCATCAAAGTGAACTTCAGAGATGGAGAGGCTTGTTTCCTATGCCGAGTAGCAAGAGGAAGATCGGCGTACACCGGTGCCCATTGTCGAGGCAGCTGAAATTCCAGAAACTGCTGAAGCTCCTCAATTGGAGGTTTATCTGCACAAATTTTCAATGATCAAAATCTATCACTAATGGTAAATTCAATGTGAATTAGAACTCTTGCTGGCTTGAATCTGGTGTCAACATTTTAATGGCTTCTCAAGTACTAAG ATGGCGGCTCATCCCATTAAGATCTTGTATCTCTTTCCCGCCTTATTCTTACCTCTCTTCGCTGTTTGCGAAATCGCTTCGTTCGCTCGTTCAAGTAACGATGTGTTGATCGATGATTTGCTGGAAATCAAGCTCAGGATCTCTCGCTTAGAATCCGTTCTGGAGGGAAGCAAGCAAAATTTAACCGAGAAAGGCAATGAAATTTTGGCGCAGGAAAGGTTAATTGAGGCTATGTCTCATAAGATTCAATACTTGGAGTCTGCTCTATTTGATATGAAGAGGAAAACATTAAGTCACGATGAAAGGATTGCTTCTCTGGAGGATGAGGTACGACTTCTCTGGGCTGTATTAAGAAAGAACAACTTTGATATTCATCTTTTGGAAGTCAAGGTACATGAAGCTGAGGAAAAACTTGAAGAGGTTACCTCACAAGTTGAGAAGATGTCTAGCATAGTATCTGAACAGTGGATTCATATTCGGCATCTAGAGCAGGCCCTTGAAATAACAAAAATAAATGCTTTGAAGGTCCGCCAGCAAGTTGCCCTAACCAGATGCACCTTTTTAAAGTTGGTCAACACACGTTTTATCAATCAACTTCAGAAGGCCCTACAGACATTGAACTATCATCTGTTCAGCAAAGTGCCTACCTTGAGTTCCATGGTTACAGGAGCCATCCAATACTTCCAAGGAGTCTATGAAGAAGCCACAAAGTATCACCATGAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAGGGACTATGCAGCATATCTTGTAAACAGGGAAGTTATTTTCTTTCTGGCGTCTGCTATAGTTACCTTCCCAATTTTTGGTGCTTGGATGTTCCTTTCTTCATGGTTTTCCAGGTGA MAAHPIKILYLFPALFLPLFAVCEIASFARSSNDVLIDDLLEIKLRISRLESVLEGSKQNLTEKGNEILAQERLIEAMSHKIQYLESALFDMKRKTLSHDERIASLEDEVRLLWAVLRKNNFDIHLLEVKVHEAEEKLEEVTSQVEKMSSIVSEQWIHIRHLEQALEITKINALKVRQQVALTRCTFLKLVNTRFINQLQKALQTLNYHLFSKVPTLSSMVTGAIQYFQGVYEEATKYHHELQRLIKQEMERRDYAAYLVNREVIFFLASAIVTFPIFGAWMFLSSWFSR
BLAST of CmaCh18G003900 vs. TrEMBL
Match: A0A0A0LSE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075570 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.2e-114 Identity = 230/291 (79.04%), Postives = 247/291 (84.88%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TrEMBL
Match: A0A061GFK7_THECC (Epidermal growth factor receptor substrate 15-like 1, putative OS=Theobroma cacao GN=TCM_029808 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.7e-57 Identity = 133/281 (47.33%), Postives = 186/281 (66.19%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TrEMBL
Match: D7TJD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g00240 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 3.8e-57 Identity = 120/246 (48.78%), Postives = 175/246 (71.14%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TrEMBL
Match: A5AJH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005069 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.6e-55 Identity = 118/246 (47.97%), Postives = 173/246 (70.33%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TrEMBL
Match: A0A0D2UN96_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G030100 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 7.5e-53 Identity = 121/282 (42.91%), Postives = 183/282 (64.89%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TAIR10
Match: AT1G28410.1 (AT1G28410.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45 Identity = 115/281 (40.93%), Postives = 166/281 (59.07%), Query Frame = 1
BLAST of CmaCh18G003900 vs. TAIR10
Match: AT2G24420.1 (AT2G24420.1 DNA repair ATPase-related) HSP 1 Score: 58.5 bits (140), Expect = 7.7e-09 Identity = 41/149 (27.52%), Postives = 78/149 (52.35%), Query Frame = 1
BLAST of CmaCh18G003900 vs. NCBI nr
Match: gi|449457763|ref|XP_004146617.1| (PREDICTED: uncharacterized protein LOC101213056 isoform X1 [Cucumis sativus]) HSP 1 Score: 421.0 bits (1081), Expect = 1.7e-114 Identity = 230/291 (79.04%), Postives = 247/291 (84.88%), Query Frame = 1
BLAST of CmaCh18G003900 vs. NCBI nr
Match: gi|778658813|ref|XP_011653316.1| (PREDICTED: uncharacterized protein LOC101213056 isoform X2 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 2.4e-81 Identity = 163/199 (81.91%), Postives = 174/199 (87.44%), Query Frame = 1
BLAST of CmaCh18G003900 vs. NCBI nr
Match: gi|731404498|ref|XP_003633019.2| (PREDICTED: uncharacterized protein LOC100853536 [Vitis vinifera]) HSP 1 Score: 233.4 bits (594), Expect = 5.0e-58 Identity = 123/252 (48.81%), Postives = 179/252 (71.03%), Query Frame = 1
BLAST of CmaCh18G003900 vs. NCBI nr
Match: gi|590624225|ref|XP_007025546.1| (Epidermal growth factor receptor substrate 15-like 1, putative [Theobroma cacao]) HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57 Identity = 133/281 (47.33%), Postives = 186/281 (66.19%), Query Frame = 1
BLAST of CmaCh18G003900 vs. NCBI nr
Match: gi|297740426|emb|CBI30608.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 229.9 bits (585), Expect = 5.5e-57 Identity = 120/246 (48.78%), Postives = 175/246 (71.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |