CsGy1G011830 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G011830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 7455948 .. 7456175 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

mRNA sequence

ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

Coding sequence (CDS)

ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

Protein sequence

MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLSPRSFQHPVSDPLPIQ
Homology
[Close]
BLAST of CsGy1G011830 vs. NCBI nr
Match: KGN64650.1 (hypothetical protein Csa_1G073100 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 8.4e-30
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60
          MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS
Sbjct: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60

Query: 61 PRSFQHPVSDPLPI 75
          PRSFQHP+   +PI
Sbjct: 61 PRSFQHPLMSTVPI 74

[Close]
BLAST of CsGy1G011830 vs. TrEMBL
Match: tr|A0A0A0LRV2|A0A0A0LRV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073100 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-30
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60
          MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS
Sbjct: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60

Query: 61 PRSFQHPVSDPLPI 75
          PRSFQHP+   +PI
Sbjct: 61 PRSFQHPLMSTVPI 74

The following BLAST results are available for this feature:
BLAST of CsGy1G011830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64650.18.4e-3093.24hypothetical protein Csa_1G073100 [Cucumis sativus][more]
BLAST of CsGy1G011830 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G011830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G011830 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRV2|A0A0A0LRV2_CUCSA5.5e-3093.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073100 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004097 catechol oxidase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G011830.1CsGy1G011830.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G011830Csa1G073100Cucumber (Chinese Long) v2cgybcuB001
CsGy1G011830CSPI01G11850Wild cucumber (PI 183967)cgybcpiB001
CsGy1G011830CsaV3_1G012020Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G011830Cucumber (Gy14) v2cgybcgybB016
CsGy1G011830Cucumber (Gy14) v2cgybcgybB035
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB002
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB074
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB084
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB086
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB108
CsGy1G011830Cucurbita maxima (Rimu)cgybcmaB142
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB003
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB068
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB080
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB101
CsGy1G011830Cucurbita moschata (Rifu)cgybcmoB133
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB023
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB033
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB066
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB070
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB102
CsGy1G011830Cucurbita pepo (Zucchini)cgybcpeB140
CsGy1G011830Cucumber (Chinese Long) v2cgybcuB021
CsGy1G011830Bottle gourd (USVL1VR-Ls)cgyblsiB015
CsGy1G011830Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G011830Bottle gourd (USVL1VR-Ls)cgyblsiB046
CsGy1G011830Bottle gourd (USVL1VR-Ls)cgyblsiB053
CsGy1G011830Melon (DHL92) v3.5.1cgybmeB022
CsGy1G011830Melon (DHL92) v3.5.1cgybmeB069
CsGy1G011830Melon (DHL92) v3.5.1cgybmeB076
CsGy1G011830Melon (DHL92) v3.6.1cgybmedB020
CsGy1G011830Melon (DHL92) v3.6.1cgybmedB066
CsGy1G011830Melon (DHL92) v3.6.1cgybmedB072
CsGy1G011830Watermelon (Charleston Gray)cgybwcgB010
CsGy1G011830Watermelon (Charleston Gray)cgybwcgB013
CsGy1G011830Watermelon (Charleston Gray)cgybwcgB033
CsGy1G011830Watermelon (97103) v1cgybwmB010
CsGy1G011830Watermelon (97103) v1cgybwmB044
CsGy1G011830Watermelon (97103) v1cgybwmB077
CsGy1G011830Wild cucumber (PI 183967)cgybcpiB020
CsGy1G011830Wild cucumber (PI 183967)cgybcpiB037
CsGy1G011830Silver-seed gourdcarcgybB0161
CsGy1G011830Silver-seed gourdcarcgybB0889
CsGy1G011830Silver-seed gourdcarcgybB0936
CsGy1G011830Cucumber (Chinese Long) v3cgybcucB045
CsGy1G011830Watermelon (97103) v2cgybwmbB002
CsGy1G011830Watermelon (97103) v2cgybwmbB016
CsGy1G011830Watermelon (97103) v2cgybwmbB024
CsGy1G011830Watermelon (97103) v2cgybwmbB032
CsGy1G011830Wax gourdcgybwgoB001
CsGy1G011830Wax gourdcgybwgoB020