CsGy1G010760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G010760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 6770655 .. 6771096 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGAGGAACACCACTCATAGAATATACTTTTGAATTCATAGATATAACATCAAATTTGATTACATTCACAGAGGCACAGAGTATCTAGAGAAACAAAAATTTTGAGTTAACTATATCCATCCAATGGTCCAATTCAAAACCAGAGCTTCTCTTTGTGCGGCCATGGTTGAATTGAAGCTTCTCCCGATAGTATATAATGCGGTGCTTGCTCAGAGAAGGAGCATACGTGGGAGGGAACATTCCCTAAGTCTTTGCTGGACAAATTTGAATGGGCGAATGGATATATAAACAGAAAGGTTTGGGCTTTACCTGAAGATTATCATCGCACTCTGAAGAGAACTCCAAAGCTTTCTTTTCCGAACTTTGATGGGTCACAATGTCATCGCAGTTGCGTCAAGGAAAGTGATCTAACCAAGCAGCACCCCAGTGTTATATGA

mRNA sequence

ATGCTTCGAGGAACACCACTCATAGAATATACTTTTGAATTCATAGATATAACATCAAATTTGATTACATTCACAGAGGCACAGAAGAAGGAGCATACGTGGGAGGGAACATTCCCTAAGTCTTTGCTGGACAAATTTGAATGGGCGAATGGATATATAAACAGAAAGGTTTGGGCTTTACCTGAAGATTATCATCGCACTCTGAAGAGAACTCCAAAGCTTTCTTTTCCGAACTTTGATGGGTCACAATGTCATCGCAGTTGCGTCAAGGAAAGTGATCTAACCAAGCAGCACCCCAGTGTTATATGA

Coding sequence (CDS)

ATGCTTCGAGGAACACCACTCATAGAATATACTTTTGAATTCATAGATATAACATCAAATTTGATTACATTCACAGAGGCACAGAAGAAGGAGCATACGTGGGAGGGAACATTCCCTAAGTCTTTGCTGGACAAATTTGAATGGGCGAATGGATATATAAACAGAAAGGTTTGGGCTTTACCTGAAGATTATCATCGCACTCTGAAGAGAACTCCAAAGCTTTCTTTTCCGAACTTTGATGGGTCACAATGTCATCGCAGTTGCGTCAAGGAAAGTGATCTAACCAAGCAGCACCCCAGTGTTATATGA

Protein sequence

MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYINRKVWALPEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI
Homology
[Close]
BLAST of CsGy1G010760 vs. NCBI nr
Match: KGN64540.1 (hypothetical protein Csa_1G063640 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 3.9e-54
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYINRKVWAL 60
           MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGY NRKVWAL
Sbjct: 1   MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYTNRKVWAL 60

Query: 61  PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI 103
           PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI
Sbjct: 61  PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI 102

[Close]
BLAST of CsGy1G010760 vs. Swiss-Prot
Match: sp|Q7XPY7|BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-04
Identity = 34/84 (40.48%), Postives = 41/84 (48.81%), Query Frame = 0 

Query: 17  ITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYINRKVWALPEDYHRTLKRTPKLSF 76
           I   LI+   A +K     G F  SLLD FEW  GY  R  + L   +++TLKRTPKLS 
Sbjct: 431 IQGYLISLASAIRKGADVRGYFVWSLLDDFEWNFGYTLR--FGLYHVHYKTLKRTPKLSV 490

Query: 77  PNF----DGSQCHRSCVKESDLTK 97
             +     GS   R    ES L K
Sbjct: 491 DWYRKFLTGSLLRRKFRDESQLHK 512

[Close]
BLAST of CsGy1G010760 vs. TrEMBL
Match: tr|A0A0A0LRM1|A0A0A0LRM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063640 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.6e-54
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYINRKVWAL 60
           MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGY NRKVWAL
Sbjct: 1   MLRGTPLIEYTFEFIDITSNLITFTEAQKKEHTWEGTFPKSLLDKFEWANGYTNRKVWAL 60

Query: 61  PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI 103
           PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI
Sbjct: 61  PEDYHRTLKRTPKLSFPNFDGSQCHRSCVKESDLTKQHPSVI 102

The following BLAST results are available for this feature:
BLAST of CsGy1G010760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64540.13.9e-5499.02hypothetical protein Csa_1G063640 [Cucumis sativus][more]
BLAST of CsGy1G010760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G010760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7XPY7|BGL14_ORYSJ3.3e-0440.48Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
BLAST of CsGy1G010760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRM1|A0A0A0LRM1_CUCSA2.6e-5499.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063640 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G010760.1CsGy1G010760.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.20.20.80coord: 8..83
e-value: 3.0E-6
score: 28.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G010760Csa1G063640Cucumber (Chinese Long) v2cgybcuB001
CsGy1G010760CsaV3_1G010940Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G010760Cucumber (Gy14) v2cgybcgybB035
CsGy1G010760Cucurbita maxima (Rimu)cgybcmaB074
CsGy1G010760Cucurbita maxima (Rimu)cgybcmaB093
CsGy1G010760Cucurbita maxima (Rimu)cgybcmaB126
CsGy1G010760Cucurbita maxima (Rimu)cgybcmaB142
CsGy1G010760Cucurbita moschata (Rifu)cgybcmoB068
CsGy1G010760Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G010760Cucurbita moschata (Rifu)cgybcmoB116
CsGy1G010760Cucurbita moschata (Rifu)cgybcmoB133
CsGy1G010760Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G010760Cucurbita pepo (Zucchini)cgybcpeB023
CsGy1G010760Cucurbita pepo (Zucchini)cgybcpeB067
CsGy1G010760Cucurbita pepo (Zucchini)cgybcpeB070
CsGy1G010760Cucumber (Chinese Long) v2cgybcuB039
CsGy1G010760Bottle gourd (USVL1VR-Ls)cgyblsiB015
CsGy1G010760Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G010760Melon (DHL92) v3.5.1cgybmeB022
CsGy1G010760Melon (DHL92) v3.5.1cgybmeB076
CsGy1G010760Melon (DHL92) v3.6.1cgybmedB020
CsGy1G010760Melon (DHL92) v3.6.1cgybmedB072
CsGy1G010760Watermelon (Charleston Gray)cgybwcgB013
CsGy1G010760Watermelon (Charleston Gray)cgybwcgB033
CsGy1G010760Watermelon (97103) v1cgybwmB010
CsGy1G010760Watermelon (97103) v1cgybwmB044
CsGy1G010760Wild cucumber (PI 183967)cgybcpiB001
CsGy1G010760Wild cucumber (PI 183967)cgybcpiB037
CsGy1G010760Silver-seed gourdcarcgybB0500
CsGy1G010760Silver-seed gourdcarcgybB0637
CsGy1G010760Silver-seed gourdcarcgybB0919
CsGy1G010760Silver-seed gourdcarcgybB0992
CsGy1G010760Cucumber (Chinese Long) v3cgybcucB045
CsGy1G010760Watermelon (97103) v2cgybwmbB002
CsGy1G010760Watermelon (97103) v2cgybwmbB032
CsGy1G010760Wax gourdcgybwgoB020
CsGy1G010760Wax gourdcgybwgoB048