CsGy1G010550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G010550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	senescence regulator (Protein of unknown function%2C DUF584)
Location	Chr1 : 6650787 .. 6652402 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAAGAAGAGAGAGAGAGAAGGAAGAGCATGAAATGGTGTGTTTTCATGATTTGTTCTGTCACCATTAACTGTGTTTCCTGAGATGGGGTTATAATGCTTTTTCATGTTATAGTAATTTTCTTTTTTAAAAAAGTTTTCTTAAATAAATAAAAACATAATGGTTTGTTGTCTTTTACCTCTTTGTTTTTGCTATTGCCACCACTTTCCTCTGTCCTTTCACATTTTAAATTAAAACTTTAGTCTAAGATTAAATTAAAAATTAAGAATATGTGTGATATTGGGAAACTGAGATTCTATAACCCATCACTTTCTTTTTCTTTTCTCTCTTCTCTCTTCTCTTCTTTCAATTATTATTATTATTATTATTATTATTTCTTCTTTTCAGTTTTTAATTGGCCATTAAAACCCATCTCTGATTTCTCTCTGTTTTTGTGGTCTTCTCCTTTCCCACATTACATTCAAAACCTCTGTTCTTCCCCCTTCTCCTTCCCCTTTTCCTTTTCCTTCTTCTTTCTTTACACCTTCTCTCCCATTCTCCTCATGTTTTTTTGGATTATGAACAAAACCCATTTCAGGAATTCTTGAAAAAAGCTCTGCTTTTTTCTCAACAGAACTCTGCCACAAAAGCCTGGGTACTAAAATTCTACAGAATCTATTTTTATTTTGCCTTTTTCTTTTTCATTCCCGAGATGACTAATCTTTTACTTACTGTTGTTGTTGTTGTTTTTTTTTTTTTTTTTCTCTTCTTCTTCTTCTCGTTAATCAGATATCAATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAATAGAAAGTCTAGTGACTATTATTACTCCTCTTCTTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGATTCTTTGCTTCTGTTTGAGAGATCATCATCATCTTCATCATTTTGTTCTGTGTTTTCTTGTTTGCTTTACTGCCATTGTTATGAGCTTAGTTAGAACAGAGTTCCTTCTTGTTTGTAGCTTTTTTTGGGTATTTAAAATGGAGTGGGAACTGTTTCATGTTCTATGATTTTGAGTTAAGAATGGTGTGTTGAAGTTCTTAGTTTATAGTGTTGTCCAATGCAAATTTTTTTAATATATTAATTGATAGATCTTCTTCTATCCTTCTTTTTGGGTTTTTATTAAATAACAAATTACTTACT

mRNA sequence

ATGAAAATAAGAAGAGAGAGAGAGAAGGAAGAGCATGAAATGATATCAATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAATAGAAAGTCTAGTGACTATTATTACTCCTCTTCTTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGATTCTTTGCTTCTGTTTGAGAGATCATCATCATCTTCATCATTTTGTTCTGTGTTTTCTTGTTTGCTTTACTGCCATTGTTATGAGCTTAGTTAGAACAGAGTTCCTTCTTGTTTGTAGCTTTTTTTGGGTATTTAAAATGGAGTGGGAACTGTTTCATGTTCTATGATTTTGAGTTAAGAATGGTGTGTTGAAGTTCTTAGTTTATAGTGTTGTCCAATGCAAATTTTTTTAATATATTAATTGATAGATCTTCTTCTATCCTTCTTTTTGGGTTTTTATTAAATAACAAATTACTTACT

Coding sequence (CDS)

ATGAAAATAAGAAGAGAGAGAGAGAAGGAAGAGCATGAAATGATATCAATGGCGAATTGGAGCAGTGCTTTGAGAAAAAACTATGGATTCAGTGATGATTTGGAAGAAGAAGATGTATGGAATTCTGTTGAAGGTAAAGAAGATTCTTCAAATTTCATCAATAGAAAGTCTAGTGACTATTATTACTCCTCTTCTTCTTCTTCTTCTTCTTCGTCCTTATCTTCTTCTTCTTCCACTTGGCGTCTCCCAACTGCTCCAAAAATGATCCCGAAATCCATTTCAACAAGAGCACATGAAACCCAGATGGCGAATAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGTCCAAAATTTACGGAAAAATGGGTTCGTCATCCACCGGGGATAAAGATGACGTTAGAGATCAAGAAGACGGTGAAGATGAGGATATGGTGCCTCCTCATGAATGGATTGCTCAGAAATTAGCAAGAAGCAGAATTTCGTCATTCTCTGTTTGTGAAGGGGTTGGAAGAACTCTCAAAGGAAGAGATTTAAGTAAAGTTCGAAACGCCATTTTAACAAAGACGGGTTTTTTAGAGTGA

Protein sequence

MKIRREREKEEHEMISMANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRKSSDYYYSSSSSSSSSSLSSSSSTWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRDQEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

Homology

[Close]

BLAST of CsGy1G010550 vs. NCBI nr
Match: XP_004153812.1 (PREDICTED: uncharacterized protein LOC101208118 [Cucumis sativus] >KGN64516.1 hypothetical protein Csa_1G062910 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 3.8e-74
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS-XXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 136
           XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD
Sbjct: 61  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 120

Query: 137 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 177

[Close]

BLAST of CsGy1G010550 vs. NCBI nr
Match: XP_008441031.1 (PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo] >ADN34054.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 164/178 (92.13%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS         XXXXXXXXXXXXXXXXX
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS----NFINRXXXXXXXXXXXXXXXXX 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 136
           XXXWRLPTAPKMIPKSISTR HETQMANNRSSAPVDIPDWSKIYGKMGSSS G+K DVRD
Sbjct: 61  XXXWRLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSSAGEKTDVRD 120

Query: 137 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           QEDGED+DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 QEDGEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of CsGy1G010550 vs. NCBI nr
Match: XP_022924226.1 (uncharacterized protein LOC111431737 [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 6.2e-61
Identity = 131/183 (71.58%), Postives = 140/183 (76.50%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS                          
Sbjct: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSS--------------------SFVTRK 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSS---TGDKDD 136
              +RLPTAPKMIPKSI+TR HETQM  NRSSAPVDIPDW+KIYGKMGSS    +G K D
Sbjct: 61  STDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPD 120

Query: 137 VRDQED--GEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 195
            RDQED  GE++DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG
Sbjct: 121 DRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 163

[Close]

BLAST of CsGy1G010550 vs. NCBI nr
Match: XP_023518990.1 (uncharacterized protein LOC111782469 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 130/183 (71.04%), Postives = 140/183 (76.50%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS                          
Sbjct: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSS--------------------SFVTRK 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSS---TGDKDD 136
              +RLPTAPKMIPKSI+TR HETQM  +RSSAPVDIPDW+KIYGKMGSS    +G K D
Sbjct: 61  STDYRLPTAPKMIPKSIATRTHETQMRTSRSSAPVDIPDWAKIYGKMGSSDGELSGQKPD 120

Query: 137 VRDQED--GEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 195
            RDQED  GE++DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG
Sbjct: 121 DRDQEDFAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 163

[Close]

BLAST of CsGy1G010550 vs. NCBI nr
Match: XP_023001323.1 (uncharacterized protein LOC111495488 [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59
Identity = 130/183 (71.04%), Postives = 139/183 (75.96%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANW+ ALRK+YGFS+DL EEDVW SVEGKEDSS                          
Sbjct: 1   MANWNGALRKSYGFSEDL-EEDVWKSVEGKEDSS--------------------SFVTRK 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSS---TGDKDD 136
              +RLPTAPKMIPKSI+TR HETQM  NRSSAPVDIPDW+KIYGKMGSS    +G K D
Sbjct: 61  STDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKSD 120

Query: 137 VRDQED--GEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 195
            RDQED  GE++DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG
Sbjct: 121 DRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 162

[Close]

BLAST of CsGy1G010550 vs. TAIR10
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 96  RAHETQMANNRSSAPVDIPDWSKIYG--KMGSSSTGDKDDVRDQEDGEDEDMVPPHEWIA 155
           + +E      +SSAP++IPDWSK+YG  K  +SS      + D ++G    MVPPHE +A
Sbjct: 48  KGNEVSGGAKQSSAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDEG---SMVPPHELVA 107

Query: 156 QKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           ++LAR++ISSFS+CEG+GRTLKGRDLSK RNA+LT+TGFLE
Sbjct: 108 KRLARTQISSFSMCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of CsGy1G010550 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 106 RSSAPVDIPDWSKIYGKMGS---SSTGDKDDVRDQEDGEDEDMVPPHEWIAQKLARSRIS 165
           +SSAP+++PDWSK+YG   S   SS                 MVPPHEW+A+KLAR++IS
Sbjct: 77  QSSAPMNVPDWSKVYGDSKSNRRSSHLHXXXXXXXXXXXXXCMVPPHEWVARKLARTQIS 136

Query: 166 SFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           SFS+CEGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 137 SFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of CsGy1G010550 vs. TAIR10
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 84.3 bits (207), Expect = 8.8e-17
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 107 SSAPVDIPDWSKIYGKMGSSSTGDKDDVRDQEDGEDEDMVPPHEWIAQKLARSRISSFSV 166
           SS P+++ +WSKI GK    S  + DD         E  +PPHE+    LA++R++SFSV
Sbjct: 72  SSLPMNVQNWSKILGKENRKSIENDDD-------GGEGKLPPHEY----LAKTRMASFSV 131

Query: 167 CEGVGRTLKGRDLSKVRNAILTKTGFLE 195
            EG+GRTLKGRD+S+VRNAIL KTGFL+
Sbjct: 132 HEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of CsGy1G010550 vs. TAIR10
Match: AT2G28400.1 (Protein of unknown function, DUF584)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 44/92 (47.83%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 107 SSAPVDIPDWSKIYG-------KMGSSSTGDKDDVRDQEDGEDEDMVPPHEWIAQKLARS 166
           SS PV++PDWSKI G       K+ +    D D++     GE    VPPHE +A +    
Sbjct: 75  SSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEIL---CGEGTRRVPPHELLANR---- 134

Query: 167 RISSFSVCEGVGRTLKGRDLSKVRNAILTKTG 192
           R++SFSV EG GRTLKGRDLS+VRN I    G
Sbjct: 135 RMASFSVHEGAGRTLKGRDLSRVRNTIFKIRG 159

[Close]

BLAST of CsGy1G010550 vs. TAIR10
Match: AT2G34340.1 (Protein of unknown function, DUF584)

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 100 TQMANNRSSAPVDIPD--WSKIYGKMGSSSTGDKDDVRDQEDGE-DEDMVPPHEWIAQKL 159
           T+ A+  SS PV IP+  + +  GK       ++D+  ++E  E   +M+PPH  I +++
Sbjct: 46  TEKASLSSSLPVSIPENIFRRYVGK-------EEDEYSEEEYSEGGGEMIPPHIMIGRRI 105

Query: 160 ARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
              ++ +FSVC G GRTLKGRDLS+VRN++L  TGFLE
Sbjct: 106 QGGQM-AFSVCSGSGRTLKGRDLSRVRNSVLRLTGFLE 135

[Close]

BLAST of CsGy1G010550 vs. TrEMBL
Match: tr|A0A0A0LX30|A0A0A0LX30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062910 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.5e-74
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS-XXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 136
           XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD
Sbjct: 61  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 120

Query: 137 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 177

[Close]

BLAST of CsGy1G010550 vs. TrEMBL
Match: tr|A0A1S3B355|A0A1S3B355_CUCME (uncharacterized protein LOC103485264 OS=Cucumis melo OX=3656 GN=LOC103485264 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.2e-71
Identity = 164/178 (92.13%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS         XXXXXXXXXXXXXXXXX
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS----NFINRXXXXXXXXXXXXXXXXX 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 136
           XXXWRLPTAPKMIPKSISTR HETQMANNRSSAPVDIPDWSKIYGKMGSSS G+K DVRD
Sbjct: 61  XXXWRLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSSAGEKTDVRD 120

Query: 137 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           QEDGED+DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 QEDGEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of CsGy1G010550 vs. TrEMBL
Match: tr|E5GC55|E5GC55_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.2e-71
Identity = 164/178 (92.13%), Postives = 166/178 (93.26%), Query Frame = 0


Query: 17  MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 76
           MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS         XXXXXXXXXXXXXXXXX
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSS----NFINRXXXXXXXXXXXXXXXXX 60

Query: 77  XXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSSTGDKDDVRD 136
           XXXWRLPTAPKMIPKSISTR HETQMANNRSSAPVDIPDWSKIYGKMGSSS G+K DVRD
Sbjct: 61  XXXWRLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSSAGEKTDVRD 120

Query: 137 QEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 195
           QEDGED+DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 QEDGEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of CsGy1G010550 vs. TrEMBL
Match: tr|A0A2I4EDW2|A0A2I4EDW2_9ROSI (uncharacterized protein LOC108988712 OS=Juglans regia OX=51240 GN=LOC108988712 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.8e-36
Identity = 99/207 (47.83%), Postives = 120/207 (57.97%), Query Frame = 0


Query: 17  MANWSSALRKNYGF------SDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXX 76
           M +W+  + K  GF       +D EEEDVW  ++ +EDSS                    
Sbjct: 1   MTDWNGIMGKTSGFGGSTTRDEDFEEEDVWGFIKEREDSS------------CKMKRKSK 60

Query: 77  XXXXXXXXXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYG---KMGS-- 136
                    WRLP+ P+MIP+  +   HE ++   +SSAP+DIPDWSKIYG   KMGS  
Sbjct: 61  DYSSGSSSAWRLPSVPRMIPRVNTPTTHEAKVV-QQSSAPMDIPDWSKIYGKGAKMGSRD 120

Query: 137 -------SSTGD---KDDVRD--------QEDGEDEDMVPPHEWIAQKLARSRISSFSVC 195
                    TG+    DD  D         +D +D DMVPPHEWIA+KLA+S+ISSFSVC
Sbjct: 121 ASWVGGGDGTGNGVANDDHVDYHGVGDYEADDNDDGDMVPPHEWIARKLAKSQISSFSVC 180

[Close]

BLAST of CsGy1G010550 vs. TrEMBL
Match: tr|A0A1U8PGZ8|A0A1U8PGZ8_GOSHI (uncharacterized protein LOC107958273 OS=Gossypium hirsutum OX=3635 GN=LOC107958273 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.9e-35
Identity = 94/197 (47.72%), Postives = 117/197 (59.39%), Query Frame = 0


Query: 17  MANWSSALRKNYG-------FSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXX 76
           MA+W   +RK            +D +EE++W   E KEDS                    
Sbjct: 1   MADWYGTMRKTTNGCNIRSTIDEDFDEEEMWCYEEEKEDSG----------------PAP 60

Query: 77  XXXXXXXXXXWRLPTAPKMIPK---SISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSS 136
                     WRLP+AP+M+P+     S+  HET+MA  +SSAP++IPDWSKIYG+ GS 
Sbjct: 61  RKPSDYSSTAWRLPSAPRMVPRVSQYSSSAKHETKMA-QQSSAPLNIPDWSKIYGRHGSL 120

Query: 137 ST---------GDKDDVRDQEDGEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGR 195
            +         GD     D +D  D DMVPPHEW+A+KLARS+ISSFSVCEG+GRTLKGR
Sbjct: 121 DSSRNGRWDYNGDNGCGEDHDD--DHDMVPPHEWLAKKLARSQISSFSVCEGIGRTLKGR 178

The following BLAST results are available for this feature:

BLAST of CsGy1G010550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153812.1	3.8e-74	99.44	PREDICTED: uncharacterized protein LOC101208118 [Cucumis sativus] >KGN64516.1 hy...	[more]
XP_008441031.1	1.7e-71	92.13	PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo] >ADN34054.1 hypot...	[more]
XP_022924226.1	6.2e-61	71.58	uncharacterized protein LOC111431737 [Cucurbita moschata]	[more]
XP_023518990.1	2.4e-60	71.04	uncharacterized protein LOC111782469 [Cucurbita pepo subsp. pepo]	[more]
XP_023001323.1	4.5e-59	71.04	uncharacterized protein LOC111495488 [Cucurbita maxima]	[more]

BLAST of CsGy1G010550 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21970.1	3.0e-25	56.44	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.5e-24	61.96	Protein of unknown function, DUF584	[more]
AT3G45210.1	8.8e-17	52.27	Protein of unknown function, DUF584	[more]
AT2G28400.1	1.0e-12	47.83	Protein of unknown function, DUF584	[more]
AT2G34340.1	3.8e-12	42.86	Protein of unknown function, DUF584	[more]

BLAST of CsGy1G010550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G010550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LX30\|A0A0A0LX30_CUCSA	2.5e-74	99.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062910 PE=4 SV=1	[more]
tr\|A0A1S3B355\|A0A1S3B355_CUCME	1.2e-71	92.13	uncharacterized protein LOC103485264 OS=Cucumis melo OX=3656 GN=LOC103485264 PE=...	[more]
tr\|E5GC55\|E5GC55_CUCME	1.2e-71	92.13	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A2I4EDW2\|A0A2I4EDW2_9ROSI	7.8e-36	47.83	uncharacterized protein LOC108988712 OS=Juglans regia OX=51240 GN=LOC108988712 P...	[more]
tr\|A0A1U8PGZ8\|A0A1U8PGZ8_GOSHI	3.9e-35	47.72	uncharacterized protein LOC107958273 OS=Gossypium hirsutum OX=3635 GN=LOC1079582...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G010550.1	CsGy1G010550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 33..194 e-value: 5.9E-47 score: 160.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..146
None	No IPR available	PANTHER	PTHR33083:SF4	SUBFAMILY NOT NAMED	coord: 31..194
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 31..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G010550	Cla014451	Watermelon (97103) v1	cgybwmB044
CsGy1G010550	Cla019378	Watermelon (97103) v1	cgybwmB010
CsGy1G010550	Csa6G513750	Cucumber (Chinese Long) v2	cgybcuB039
CsGy1G010550	Csa1G062910	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G010550	MELO3C002459	Melon (DHL92) v3.5.1	cgybmeB034
CsGy1G010550	ClCG01G021970	Watermelon (Charleston Gray)	cgybwcgB013
CsGy1G010550	ClCG03G004700	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G010550	CSPI01G10660	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G010550	CSPI06G33560	Wild cucumber (PI 183967)	cgybcpiB037
CsGy1G010550	CmaCh13G007430	Cucurbita maxima (Rimu)	cgybcmaB074
CsGy1G010550	CmaCh18G002610	Cucurbita maxima (Rimu)	cgybcmaB093
CsGy1G010550	CmoCh18G002710	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G010550	CmoCh13G007730	Cucurbita moschata (Rifu)	cgybcmoB068
CsGy1G010550	Cp4.1LG20g03660	Cucurbita pepo (Zucchini)	cgybcpeB070
CsGy1G010550	Cp4.1LG10g09610	Cucurbita pepo (Zucchini)	cgybcpeB023
CsGy1G010550	MELO3C007391.2	Melon (DHL92) v3.6.1	cgybmedB072
CsGy1G010550	MELO3C002454.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G010550	CsaV3_1G010730	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G010550	CsaV3_6G049040	Cucumber (Chinese Long) v3	cgybcucB045
CsGy1G010550	Cla97C01G021600	Watermelon (97103) v2	cgybwmbB002
CsGy1G010550	Cla97C03G055850	Watermelon (97103) v2	cgybwmbB032
CsGy1G010550	Bhi08G001502	Wax gourd	cgybwgoB030
CsGy1G010550	Bhi03G000443	Wax gourd	cgybwgoB020
CsGy1G010550	Carg13696	Silver-seed gourd	carcgybB0919
CsGy1G010550	Carg06848	Silver-seed gourd	carcgybB0500
CsGy1G010550	Carg07549	Silver-seed gourd	carcgybB0992

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy1G010550	CsGy6G033110	Cucumber (Gy14) v2	cgybcgybB035

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G010550	Cucurbita maxima (Rimu)	cgybcmaB126
CsGy1G010550	Cucurbita maxima (Rimu)	cgybcmaB142
CsGy1G010550	Cucurbita moschata (Rifu)	cgybcmoB116
CsGy1G010550	Cucurbita moschata (Rifu)	cgybcmoB133
CsGy1G010550	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G010550	Cucurbita pepo (Zucchini)	cgybcpeB067
CsGy1G010550	Bottle gourd (USVL1VR-Ls)	cgyblsiB015
CsGy1G010550	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G010550	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G010550	Melon (DHL92) v3.5.1	cgybmeB076
CsGy1G010550	Silver-seed gourd	carcgybB0637