Carg07549 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07549
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Senescence regulator
Location	Cucurbita_argyrosperma_scaffold_024 : 229511 .. 230799 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACACCGATCAACAGGTAAGCTAAGAATGTGTGATATTCCGAAACTGAGATTCTTTATCATCCCCCATCGCTTTCTTTTGCTTTCTCTCTTCCTTAAATCTCTTCCCCGTTCTTAATCAGCCATTGAGTTTTAAGGAAAACCCATCTCCGTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGTTTTTGTGTTCTTCCTTGGAGATTTTCAGACCAACCAATTTTACCATCTACTTTCTTTACAGCTTCTCTCCCATTTGCCTCATGTCTTTTGGGATTATGAGCAAAACCCATTTCAGGAACTCTTGAAAAAGCTCTGCTTTTTCCAGCTGACCACTGCGGCAAAAGCCTGGGTAGAATTCTAGAATCTTTATTCATTTATTTCTTTTTCGATTCCCGAGATGACTAATCACTAGAACTGTTTACATTTTGGGTTTGAATTATTCCACCTTTTTTATTTCTATTTTGTCATAAAATAGGTTCCGATGGCGAATTGGAACGGCGCTCTGAGAAAAAGCTATGGCTTCAGTGAAGATTTGGAAGAAGAAGATGTGTGGAAATCCGTTGAAGGTAAAGAAGATTCTTCAAGTTTTGTAACGAGAAAGTCTACTGATTATCGTCTTCCAACTGCACCGAAAATGATCCCGAAATCCATTGCAACAAGAACACACGAAACCCAGATGAGGACTAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGGCTAAAATTTACGGCAAGATGGGCTCGTCGGACGGCGAGCTTTCAGGCCAGAAACCTGACGACAGAGATCAAGAAGACATCGCCGGTGAAGAAGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAACTGGCGAGAAGCCGAATTTCGTCTTTCTCTGTTTGTGAAGGGGTTGGTAGAACTCTCAAAGGAAGGGATTTAAGCAAAGTGCGAAACGCCATTTTAACGAAGACTGGTTTCTTAGAGTGATACTTAACGGCCGAGATGTTCATCATCACCGTTTTGTTCTTTTCTTTCCGCCATTGTTAAGGTCTTTAGAGCTTAGAACAGAGTTTTTAGCAAGAACTGGAAGAAAAAACAAAAGAAAATGCAAAAAAGATGAAGAATTTGTAGTCTGTTGAGAATTCTATCTGGTACCCAGATGGGTTTTTTGTTTTCTGTTCTTAATTTTCCCTCTCTCTCTCTCTCTCTCTGCTTCATGTTCTGTGATTTGGAATTTTGAAAATGGGAGAATTTGTTGTTTGCAGCCTTTCTTCCATGGCTGAGTGCTTG

mRNA sequence

AAAACACCGATCAACAGGTAAGCTAAGAATGTGTGATATTCCGAAACTGAGATTCTTTATCATCCCCCATCGCTTTCTTTTGCTTTCTCTCTTCCTTAAATCTCTTCCCCGTTCTTAATCAGCCATTGAGTTTTAAGGAAAACCCATCTCCGTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGTTTTTGTGTTCTTCCTTGGAGATTTTCAGACCAACCAATTTTACCATCTACTTTCTTTACAGCTTCTCTCCCATTTGCCTCATGTCTTTTGGGATTATGAGCAAAACCCATTTCAGGAACTCTTGAAAAAGCTCTGCTTTTTCCAGCTGACCACTGCGGCAAAAGCCTGGGTTCCGATGGCGAATTGGAACGGCGCTCTGAGAAAAAGCTATGGCTTCAGTGAAGATTTGGAAGAAGAAGATGTGTGGAAATCCGTTGAAGGTAAAGAAGATTCTTCAAGTTTTGTAACGAGAAAGTCTACTGATTATCGTCTTCCAACTGCACCGAAAATGATCCCGAAATCCATTGCAACAAGAACACACGAAACCCAGATGAGGACTAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGGCTAAAATTTACGGCAAGATGGGCTCGTCGGACGGCGAGCTTTCAGGCCAGAAACCTGACGACAGAGATCAAGAAGACATCGCCGGTGAAGAAGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAACTGGCGAGAAGCCGAATTTCGTCTTTCTCTGTTTGTGAAGGGGTTGGTAGAACTCTCAAAGGAAGGGATTTAAGCAAAGTGCGAAACGCCATTTTAACGAAGACTGGTTTCTTAGAGTGATACTTAACGGCCGAGATGTTCATCATCACCGTTTTGTTCTTTTCTTTCCGCCATTGTTAAGGTCTTTAGAGCTTAGAACAGAGTTTTTAGCAAGAACTGGAAGAAAAAACAAAAGAAAATGCAAAAAAGATGAAGAATTTGTAGTCTGTTGAGAATTCTATCTGGTACCCAGATGGGTTTTTTGTTTTCTGTTCTTAATTTTCCCTCTCTCTCTCTCTCTCTCTGCTTCATGTTCTGTGATTTGGAATTTTGAAAATGGGAGAATTTGTTGTTTGCAGCCTTTCTTCCATGGCTGAGTGCTTG

Coding sequence (CDS)

ATGGCGAATTGGAACGGCGCTCTGAGAAAAAGCTATGGCTTCAGTGAAGATTTGGAAGAAGAAGATGTGTGGAAATCCGTTGAAGGTAAAGAAGATTCTTCAAGTTTTGTAACGAGAAAGTCTACTGATTATCGTCTTCCAACTGCACCGAAAATGATCCCGAAATCCATTGCAACAAGAACACACGAAACCCAGATGAGGACTAATCGATCCTCTGCTCCGGTGGACATTCCCGATTGGGCTAAAATTTACGGCAAGATGGGCTCGTCGGACGGCGAGCTTTCAGGCCAGAAACCTGACGACAGAGATCAAGAAGACATCGCCGGTGAAGAAGACGACATGGTGCCTCCTCATGAATGGATTGCTCAGAAACTGGCGAGAAGCCGAATTTCGTCTTTCTCTGTTTGTGAAGGGGTTGGTAGAACTCTCAAAGGAAGGGATTTAAGCAAAGTGCGAAACGCCATTTTAACGAAGACTGGTTTCTTAGAGTGA

Protein sequence

MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE

Homology

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BLAST of Carg07549 vs. NCBI nr
Match: XP_022924226.1 (uncharacterized protein LOC111431737 [Cucurbita moschata])

HSP 1 Score: 328.2 bits (840), Expect = 1.6e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60
           MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR
Sbjct: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60

Query: 61  THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEW 120
           THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEW
Sbjct: 61  THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEW 120

Query: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 163

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BLAST of Carg07549 vs. NCBI nr
Match: XP_023518990.1 (uncharacterized protein LOC111782469 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.7 bits (831), Expect = 1.8e-85
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60
           MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR
Sbjct: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60

Query: 61  THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEW 120
           THETQMRT+RSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQED AGEEDDMVPPHEW
Sbjct: 61  THETQMRTSRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDFAGEEDDMVPPHEW 120

Query: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 163

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BLAST of Carg07549 vs. NCBI nr
Match: XP_023001323.1 (uncharacterized protein LOC111495488 [Cucurbita maxima])

HSP 1 Score: 318.9 bits (816), Expect = 9.8e-84
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60
           MANWNGALRKSYGFSEDL EEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR
Sbjct: 1   MANWNGALRKSYGFSEDL-EEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATR 60

Query: 61  THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEW 120
           THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQK DDRDQEDIAGEEDDMVPPHEW
Sbjct: 61  THETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKSDDRDQEDIAGEEDDMVPPHEW 120

Query: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 IAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 162

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BLAST of Carg07549 vs. NCBI nr
Match: XP_008441031.1 (PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo] >ADN34054.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 135/179 (75.42%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTR----------------KSTDY 60
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS+F+ R                    +
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRXXXXXXXXXXXXXXXXXXXXW 60

Query: 61  RLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQ 120
           RLPTAPKMIPKSI+TRTHETQM  NRSSAPVDIPDW+KIYGKMGSS    +G+K D RDQ
Sbjct: 61  RLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSS---AGEKTDVRDQ 120

Query: 121 EDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           ED  GE+DDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 ED--GEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of Carg07549 vs. NCBI nr
Match: XP_023542791.1 (uncharacterized protein LOC111802596 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 1.5e-63
Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTRKSTDY---RLPTAPKMIPKSI 60
           MANW+  LRKSYG SEDLEEEDVW SVE  E+SS+F+TRK+ DY   RLP+APKMIPKSI
Sbjct: 1   MANWSSVLRKSYGVSEDLEEEDVWSSVESNEESSNFITRKTNDYSTWRLPSAPKMIPKSI 60

Query: 61  ATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEE-DDMVP 120
           +TRTHETQM  NRSSAPV IPDW+KIYGKM     + SG+KPDD DQED+ GEE DDMVP
Sbjct: 61  STRTHETQMTDNRSSAPVVIPDWSKIYGKM-----DFSGEKPDDGDQEDVDGEEDDDMVP 120

Query: 121 PHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           PHEWIAQKLARSRISS SV EGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 121 PHEWIAQKLARSRISSCSVFEGVGRTLKGRDLSKVRNAVLSKTGFLE 162

[Close]

BLAST of Carg07549 vs. TAIR10
Match: AT4G04630.1 (Protein of unknown function, DUF584)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 16  EDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPV 75
           E+ +EEDVW  +   E SS  +    + +         P +I  R  +      +SSAP+
Sbjct: 25  EEFQEEDVWSVLREGETSSPEMKIPKSHFSSXXXXXXXPWNI--RRSKEVSGVKQSSAPM 84

Query: 76  DIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSV 135
           ++PDW+K+YG   S     S                  MVPPHEW+A+KLAR++ISSFS+
Sbjct: 85  NVPDWSKVYG--DSKSNRRSSHLHXXXXXXXXXXXXXCMVPPHEWVARKLARTQISSFSM 144

Query: 136 CEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           CEGVGRTLKGRDLSKVRNA+L+KTGFLE
Sbjct: 145 CEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of Carg07549 vs. TAIR10
Match: AT4G21970.1 (Protein of unknown function, DUF584)

HSP 1 Score: 114.4 bits (285), Expect = 6.7e-26
Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = 0


Query: 16  EDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPV 75
           E+ +EE+VW SV  + ++     + S    L +A          + +E      +SSAP+
Sbjct: 5   EEFQEEEVW-SVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNEVSGGAKQSSAPM 64

Query: 76  DIPDWAKIYG-KMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFS 135
           +IPDW+K+YG    ++   L     DD D       E  MVPPHE +A++LAR++ISSFS
Sbjct: 65  NIPDWSKVYGYSKKNTSSHLHSWAIDDDD-------EGSMVPPHELVAKRLARTQISSFS 124

Query: 136 VCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           +CEG+GRTLKGRDLSK RNA+LT+TGFLE
Sbjct: 125 MCEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of Carg07549 vs. TAIR10
Match: AT3G45210.1 (Protein of unknown function, DUF584)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 55/147 (37.41%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 17  DLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVD 76
           + +E D++ +   + DS  F  +  T  R     K  P ++ T        T  SS P++
Sbjct: 33  EFDESDLYSN---RSDSPEFRRKLITSNR-----KSSPATVTT-------TTVASSLPMN 92

Query: 77  IPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVC 136
           + +W+KI GK          +K  + D +   G+    +PPHE+    LA++R++SFSV 
Sbjct: 93  VQNWSKILGK--------ENRKSIENDDDGGEGK----LPPHEY----LAKTRMASFSVH 148

Query: 137 EGVGRTLKGRDLSKVRNAILTKTGFLE 164
           EG+GRTLKGRD+S+VRNAIL KTGFL+
Sbjct: 153 EGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of Carg07549 vs. TAIR10
Match: AT2G28400.1 (Protein of unknown function, DUF584)

HSP 1 Score: 74.7 bits (182), Expect = 5.8e-14
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 0


Query: 17  DLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVD 76
           +L+E D++ +      S SF     T  R  T  ++   S + +          SS PV+
Sbjct: 29  ELDEWDLFNTGSDSSSSFSFSDLTITSGRTGTNRQIHGGSDSGKA--------ASSLPVN 88

Query: 77  IPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVC 136
           +PDW+KI G       ++S ++  D D E + GE    VPPHE +A +    R++SFSV 
Sbjct: 89  VPDWSKILGDESRRQRKISNEEEVDGD-EILCGEGTRRVPPHELLANR----RMASFSVH 148

Query: 137 EGVGRTLKGRDLSKVRNAILTKTG 161
           EG GRTLKGRDLS+VRN I    G
Sbjct: 149 EGAGRTLKGRDLSRVRNTIFKIRG 159

[Close]

BLAST of Carg07549 vs. TAIR10
Match: AT2G34340.1 (Protein of unknown function, DUF584)

HSP 1 Score: 70.9 bits (172), Expect = 8.4e-13
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 15  SEDLEEEDVWKSVEGKEDSSSFVTRKSTDYRLPTAPKMIPKSIATRTHETQMRTNRSSAP 74
           +E+ +E +V  S     D  S V  K  + RL  +     K+   +   T+  +  SS P
Sbjct: 2   AEEFDESEVVFS-----DGLSSVLHKENENRLFGSDMERKKTRRIKRTTTEKASLSSSLP 61

Query: 75  VDIPDWAKIYGKMGSSDGELSGQKPDDRDQEDIAGEEDDMVPPHEWIAQKLARSRISSFS 134
           V IP+   I+ +         G++ D+  +E+ +    +M+PPH  I +++   ++ +FS
Sbjct: 62  VSIPE--NIFRR-------YVGKEEDEYSEEEYSEGGGEMIPPHIMIGRRIQGGQM-AFS 121

Query: 135 VCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           VC G GRTLKGRDLS+VRN++L  TGFLE
Sbjct: 122 VCSGSGRTLKGRDLSRVRNSVLRLTGFLE 135

[Close]

BLAST of Carg07549 vs. TrEMBL
Match: tr|A0A1S3B355|A0A1S3B355_CUCME (uncharacterized protein LOC103485264 OS=Cucumis melo OX=3656 GN=LOC103485264 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.2e-65
Identity = 135/179 (75.42%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTR----------------KSTDY 60
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS+F+ R                    +
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRXXXXXXXXXXXXXXXXXXXXW 60

Query: 61  RLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQ 120
           RLPTAPKMIPKSI+TRTHETQM  NRSSAPVDIPDW+KIYGKMGSS    +G+K D RDQ
Sbjct: 61  RLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSS---AGEKTDVRDQ 120

Query: 121 EDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           ED  GE+DDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 ED--GEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of Carg07549 vs. TrEMBL
Match: tr|E5GC55|E5GC55_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.2e-65
Identity = 135/179 (75.42%), Postives = 146/179 (81.56%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSSSFVTR----------------KSTDY 60
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS+F+ R                    +
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSNFINRXXXXXXXXXXXXXXXXXXXXW 60

Query: 61  RLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDDRDQ 120
           RLPTAPKMIPKSI+TRTHETQM  NRSSAPVDIPDW+KIYGKMGSS    +G+K D RDQ
Sbjct: 61  RLPTAPKMIPKSISTRTHETQMANNRSSAPVDIPDWSKIYGKMGSSS---AGEKTDVRDQ 120

Query: 121 EDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 164
           ED  GE+DDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE
Sbjct: 121 ED--GEDDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFLE 174

[Close]

BLAST of Carg07549 vs. TrEMBL
Match: tr|A0A0A0LX30|A0A0A0LX30_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062910 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.5e-61
Identity = 131/182 (71.98%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 1   MANWNGALRKSYGFSEDLEEEDVWKSVEGKEDSS-------------------SFVTRKS 60
           MANW+ ALRK+YGFS+DLEEEDVW SVEGKEDSS                          
Sbjct: 1   MANWSSALRKNYGFSDDLEEEDVWNSVEGKEDSSXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  TDYRLPTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSGQKPDD 120
             +RLPTAPKMIPKSI+TR HETQM  NRSSAPVDIPDW+KIYGKMGSS    +G K D 
Sbjct: 61  XXWRLPTAPKMIPKSISTRAHETQMANNRSSAPVDIPDWSKIYGKMGSSS---TGDKDDV 120

Query: 121 RDQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGF 164
           RDQED  GE++DMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGF
Sbjct: 121 RDQED--GEDEDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGF 177

[Close]

BLAST of Carg07549 vs. TrEMBL
Match: tr|A0A2I4EDW2|A0A2I4EDW2_9ROSI (uncharacterized protein LOC108988712 OS=Juglans regia OX=51240 GN=LOC108988712 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.6e-42
Identity = 104/195 (53.33%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 1   MANWNGALRKSYGF------SEDLEEEDVWKSVEGKEDSSSFVTRKSTDY--------RL 60
           M +WNG + K+ GF       ED EEEDVW  ++ +EDSS  + RKS DY        RL
Sbjct: 1   MTDWNGIMGKTSGFGGSTTRDEDFEEEDVWGFIKEREDSSCKMKRKSKDYSSGSSSAWRL 60

Query: 61  PTAPKMIPKSIATRTHETQMRTNRSSAPVDIPDWAKIYGK-----------MGSSDGELS 120
           P+ P+MIP+     THE ++   +SSAP+DIPDW+KIYGK           +G  DG  +
Sbjct: 61  PSVPRMIPRVNTPTTHEAKV-VQQSSAPMDIPDWSKIYGKGAKMGSRDASWVGGGDGTGN 120

Query: 121 GQKPDDR-------DQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDL 164
           G   DD        D E    ++ DMVPPHEWIA+KLA+S+ISSFSVCEGVGRTLKGRDL
Sbjct: 121 GVANDDHVDYHGVGDYEADDNDDGDMVPPHEWIARKLAKSQISSFSVCEGVGRTLKGRDL 180

[Close]

BLAST of Carg07549 vs. TrEMBL
Match: tr|A0A0D2S397|A0A0D2S397_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G178800 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.2e-38
Identity = 99/181 (54.70%), Postives = 127/181 (70.17%), Query Frame = 0


Query: 1   MANWNGALRKSY-GFS------EDLEEEDVWKSVEGKEDSSSFVTRKSTDY-----RLPT 60
           MA+W G +RK+  G S      ED +EE++W+  E KEDS S   RK +DY     RLP+
Sbjct: 1   MADWYGTMRKTTDGCSIRSTRDEDFDEEEMWRYEEEKEDSGS-APRKPSDYSSTAWRLPS 60

Query: 61  APKMIPK---SIATRTHETQMRTNRSSAPVDIPDWAKIYGKMGSSDGELSG---QKPDDR 120
           AP+M+P+     ++  HET+M   +SSAP++IPDW+KIYG+ GS D   +G       D 
Sbjct: 61  APRMVPRVSQYSSSAKHETKM-AQQSSAPLNIPDWSKIYGRHGSLDSSRNGTWVYNGVDG 120

Query: 121 DQEDIAGEEDDMVPPHEWIAQKLARSRISSFSVCEGVGRTLKGRDLSKVRNAILTKTGFL 164
             ED   ++ DMVPPHEW+A+KLARS+ISSFSVCEG+GRTLKGRDLSKVRNA+LTKTGFL
Sbjct: 121 CGED-HDDDHDMVPPHEWLAKKLARSQISSFSVCEGIGRTLKGRDLSKVRNAVLTKTGFL 178

The following BLAST results are available for this feature:

BLAST of Carg07549 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924226.1	1.6e-86	100.00	uncharacterized protein LOC111431737 [Cucurbita moschata]	[more]
XP_023518990.1	1.8e-85	98.77	uncharacterized protein LOC111782469 [Cucurbita pepo subsp. pepo]	[more]
XP_023001323.1	9.8e-84	98.77	uncharacterized protein LOC111495488 [Cucurbita maxima]	[more]
XP_008441031.1	7.8e-65	75.42	PREDICTED: uncharacterized protein LOC103485264 [Cucumis melo] >ADN34054.1 hypot...	[more]
XP_023542791.1	1.5e-63	77.84	uncharacterized protein LOC111802596 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07549 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04630.1	1.3e-26	45.27	Protein of unknown function, DUF584	[more]
AT4G21970.1	6.7e-26	44.30	Protein of unknown function, DUF584	[more]
AT3G45210.1	2.4e-15	37.41	Protein of unknown function, DUF584	[more]
AT2G28400.1	5.8e-14	37.50	Protein of unknown function, DUF584	[more]
AT2G34340.1	8.4e-13	34.23	Protein of unknown function, DUF584	[more]

BLAST of Carg07549 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07549 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B355\|A0A1S3B355_CUCME	5.2e-65	75.42	uncharacterized protein LOC103485264 OS=Cucumis melo OX=3656 GN=LOC103485264 PE=...	[more]
tr\|E5GC55\|E5GC55_CUCME	5.2e-65	75.42	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0LX30\|A0A0A0LX30_CUCSA	4.5e-61	71.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062910 PE=4 SV=1	[more]
tr\|A0A2I4EDW2\|A0A2I4EDW2_9ROSI	3.6e-42	53.33	uncharacterized protein LOC108988712 OS=Juglans regia OX=51240 GN=LOC108988712 P...	[more]
tr\|A0A0D2S397\|A0A0D2S397_GOSRA	9.2e-38	54.70	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G178800 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07549-RA	Carg07549-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 32..163 e-value: 2.0E-38 score: 132.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..115
None	No IPR available	PANTHER	PTHR33083:SF4	SUBFAMILY NOT NAMED	coord: 15..163
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 15..163

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07549	Cla014451	Watermelon (97103) v1	carwmB1007
Carg07549	Cla019378	Watermelon (97103) v1	carwmB1004
Carg07549	Csa1G062910	Cucumber (Chinese Long) v2	carcuB1020
Carg07549	Csa6G513750	Cucumber (Chinese Long) v2	carcuB1021
Carg07549	MELO3C007391	Melon (DHL92) v3.5.1	carmeB0980
Carg07549	MELO3C002454	Melon (DHL92) v3.5.1	carmeB0977
Carg07549	ClCG03G004700	Watermelon (Charleston Gray)	carwcgB0981
Carg07549	ClCG01G021970	Watermelon (Charleston Gray)	carwcgB0979
Carg07549	CSPI01G10660	Wild cucumber (PI 183967)	carcpiB1044
Carg07549	CSPI06G33560	Wild cucumber (PI 183967)	carcpiB1045
Carg07549	Cucsa.085790	Cucumber (Gy14) v1	carcgyB1119
Carg07549	Cucsa.045220	Cucumber (Gy14) v1	carcgyB1118
Carg07549	CmaCh13G007430	Cucurbita maxima (Rimu)	carcmaB1393
Carg07549	CmaCh18G002610	Cucurbita maxima (Rimu)	carcmaB1394
Carg07549	CmaCh03G005390	Cucurbita maxima (Rimu)	carcmaB1398
Carg07549	CmoCh18G002710	Cucurbita moschata (Rifu)	carcmoB1352
Carg07549	CmoCh13G007730	Cucurbita moschata (Rifu)	carcmoB1349
Carg07549	Lsi01G004270	Bottle gourd (USVL1VR-Ls)	carlsiB917
Carg07549	Cp4.1LG09g09210	Cucurbita pepo (Zucchini)	carcpeB1395
Carg07549	Cp4.1LG20g03660	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07549	CsGy6G033110	Cucumber (Gy14) v2	carcgybB0993
Carg07549	CsGy1G010550	Cucumber (Gy14) v2	carcgybB0992
Carg07549	MELO3C002454.2	Melon (DHL92) v3.6.1	carmedB0987
Carg07549	MELO3C007391.2	Melon (DHL92) v3.6.1	carmedB0990
Carg07549	CsaV3_1G010730	Cucumber (Chinese Long) v3	carcucB1049
Carg07549	CsaV3_6G049040	Cucumber (Chinese Long) v3	carcucB1051
Carg07549	Cla97C01G021600	Watermelon (97103) v2	carwmbB1059
Carg07549	Cla97C03G055850	Watermelon (97103) v2	carwmbB1061
Carg07549	Bhi03G000443	Wax gourd	carwgoB1175
Carg07549	Bhi08G001502	Wax gourd	carwgoB1182

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07549	Carg06848	Silver-seed gourd	carcarB483
Carg07549	Carg13696	Silver-seed gourd	carcarB645

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07549	Silver-seed gourd	carcarB565
Carg07549	Cucurbita maxima (Rimu)	carcmaB1399
Carg07549	Cucurbita moschata (Rifu)	carcmoB1353
Carg07549	Cucurbita moschata (Rifu)	carcmoB1355
Carg07549	Cucurbita pepo (Zucchini)	carcpeB1397
Carg07549	Cucurbita pepo (Zucchini)	carcpeB1400
Carg07549	Bottle gourd (USVL1VR-Ls)	carlsiB920
Carg07549	Wax gourd	carwgoB1179