CsGy1G009450 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G009450
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 5873594 .. 5873872 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGTTTCAAAGGTATAGTACCAGTAATTACTTCTTGTTTCTAACATCTTTCCATGATGTTGAATATGTACAACATGGGATTGACGAGAAGCCTGGTGAGTCTGTAGAAGCAGCAATGTTGGTAACAATTTTACTTGATCTATGCCGTATCTTCCTTGCCCTGCCAAAAAGCGATGCTATCAACCATGGTTTCTTGGAAAAACCAATTGAAACTTCAGAACCTGCATTGCATCTTACCGTAAAGTATTATTCCCCCGATGTCAAACTTACATAG

mRNA sequence

ATGAGTTTGTTTCAAAGGTATAGTACCAGTAATTACTTCTTGTTTCTAACATCTTTCCATGATGTTGAATATGTACAACATGGGATTGACGAGAAGCCTGGTGAGTCTGTAGAAGCAGCAATGTTGGTAACAATTTTACTTGATCTATGCCGTATCTTCCTTGCCCTGCCAAAAAGCGATGCTATCAACCATGGTTTCTTGGAAAAACCAATTGAAACTTCAGAACCTGCATTGCATCTTACCGTAAAGTATTATTCCCCCGATGTCAAACTTACATAG

Coding sequence (CDS)

ATGAGTTTGTTTCAAAGGTATAGTACCAGTAATTACTTCTTGTTTCTAACATCTTTCCATGATGTTGAATATGTACAACATGGGATTGACGAGAAGCCTGGTGAGTCTGTAGAAGCAGCAATGTTGGTAACAATTTTACTTGATCTATGCCGTATCTTCCTTGCCCTGCCAAAAAGCGATGCTATCAACCATGGTTTCTTGGAAAAACCAATTGAAACTTCAGAACCTGCATTGCATCTTACCGTAAAGTATTATTCCCCCGATGTCAAACTTACATAG

Protein sequence

MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSDAINHGFLEKPIETSEPALHLTVKYYSPDVKLT
Homology
[Close]
BLAST of CsGy1G009450 vs. NCBI nr
Match: KGN64396.1 (hypothetical protein Csa_1G050350 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD 60
          MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD
Sbjct: 1  MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD 60

Query: 61 AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT 93
          AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT
Sbjct: 61 AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT 92

[Close]
BLAST of CsGy1G009450 vs. TrEMBL
Match: tr|A0A0A0LWM1|A0A0A0LWM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050350 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.3e-36
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD 60
          MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD
Sbjct: 1  MSLFQRYSTSNYFLFLTSFHDVEYVQHGIDEKPGESVEAAMLVTILLDLCRIFLALPKSD 60

Query: 61 AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT 93
          AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT
Sbjct: 61 AINXXXXXXXXXXXXPALHLTVKYYSPDVKLT 92

The following BLAST results are available for this feature:
BLAST of CsGy1G009450 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64396.11.2e-35100.00hypothetical protein Csa_1G050350 [Cucumis sativus][more]
BLAST of CsGy1G009450 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G009450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G009450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWM1|A0A0A0LWM1_CUCSA8.3e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050350 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009450.1CsGy1G009450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G009450Csa1G050350Cucumber (Chinese Long) v2cgybcuB001
CsGy1G009450CSPI01G09400Wild cucumber (PI 183967)cgybcpiB001
CsGy1G009450CsaV3_1G009510Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G009450Cucumber (Gy14) v2cgybcgybB005
CsGy1G009450Cucurbita maxima (Rimu)cgybcmaB025
CsGy1G009450Cucurbita maxima (Rimu)cgybcmaB049
CsGy1G009450Cucurbita maxima (Rimu)cgybcmaB063
CsGy1G009450Cucurbita maxima (Rimu)cgybcmaB085
CsGy1G009450Cucurbita moschata (Rifu)cgybcmoB026
CsGy1G009450Cucurbita moschata (Rifu)cgybcmoB046
CsGy1G009450Cucurbita moschata (Rifu)cgybcmoB058
CsGy1G009450Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G009450Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G009450Cucurbita pepo (Zucchini)cgybcpeB049
CsGy1G009450Cucurbita pepo (Zucchini)cgybcpeB080
CsGy1G009450Cucumber (Chinese Long) v2cgybcuB014
CsGy1G009450Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G009450Bottle gourd (USVL1VR-Ls)cgyblsiB064
CsGy1G009450Melon (DHL92) v3.5.1cgybmeB022
CsGy1G009450Melon (DHL92) v3.5.1cgybmeB046
CsGy1G009450Melon (DHL92) v3.6.1cgybmedB020
CsGy1G009450Melon (DHL92) v3.6.1cgybmedB041
CsGy1G009450Watermelon (Charleston Gray)cgybwcgB033
CsGy1G009450Watermelon (Charleston Gray)cgybwcgB069
CsGy1G009450Watermelon (97103) v1cgybwmB010
CsGy1G009450Watermelon (97103) v1cgybwmB087
CsGy1G009450Wild cucumber (PI 183967)cgybcpiB013
CsGy1G009450Silver-seed gourdcarcgybB0373
CsGy1G009450Silver-seed gourdcarcgybB0500
CsGy1G009450Silver-seed gourdcarcgybB0989
CsGy1G009450Cucumber (Chinese Long) v3cgybcucB010
CsGy1G009450Watermelon (97103) v2cgybwmbB032
CsGy1G009450Watermelon (97103) v2cgybwmbB070
CsGy1G009450Wax gourdcgybwgoB029