CsGy1G007170 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCACAAGGCCACGAGCCTATTTTATTATTTTATTATTTTTATTTGTACCAACATTAAATTGCTTTTATTTATTTTTAAAATGAAAAGACGTGCTTCTCTTGCTTTGCCTCTTTTTTAAATTTTAATTTCCTTTTCGTTTTTTTTGATATAAAACAATCGAAATTTCTCTCTTTCTTTTTCCCTCCTTGTGTGTGTAGAGAATTTTCATGGTTTAGAAGAACGAGAGTTTTAATTTTACAGATTTCCAAATGGAGTGGGATTTTTTGGGTTTGAATTCCAAGAATGTGGCCATGCCTTTGCCTATGCCTTTGAAGGAAGAATTTCAAGACAATTCTAAGAATTCAGGTATGTTTATGTTTATGCTTCTTCGTTCTTCCATTTTTCAGTTTCCATGCCGGAAATTGAAGTTTCGTGTGATTCAATACATGAATGTCTTTTTGTTATTAGTTCGAGTTTTTTTTAAATTTGAATTTTCTGAGGAACTAACCGGAAAATCTGTGGGGGAAGAAAACCAGGTTTGTCGCGGTGTATTCGAATGTAAATTTTAGGTGTAAAAAAGAAAGAACGACTGACACACATAAAGTTTCTGGGGAATATATATATATATATATAATTTAATCATTTTTTTATTTAAAAACTATTAGTTTTGTACTTCGTGTACTTTTTCTAAATTGGAAATTTACTTTTTCTAATTTTTCATTCACAAATTTCATTTTTAGTTTTCTGTCTTTGCAAATTGGGTTTGATTCCCTACCATTTGTTTAAATAAACTATTTTCCTAATTTTTGAACTTCAAACGTGTTTGATAATGATTTATGTTTTTGTTTTCTTTAAATTTGAGCTTAATTAGAAATACTACTGATTTTTTCTTTTTTGCTACTGTTAAAAAAAAACCAAATCAAATTTCGTAAAGTGAAGAAAGTAGTTTCCAGTTTTTCTTTTGTTTTTGGAATTTGATTGATAATTTATGCCTTCTTTTTTAGAATTATAGTATGGAATTGAGGGGAAAGAAAACATAAATTTCAAAAACAGAAAACTAATTAAGTCCGTAATTAATTTCTTTACATACGACCTTAAGTAGGTTTTTAGTTTTTTTTTTAAAAAAGTAGAATAGCTATGGAACATTTCCTAAGATAGGTTATAATTTTGACTTGGATTTAATATATACATACACACACATATATATATATTTAAAATAGATAAAATCAAATGGGTATGGGCCTTATGTATCGAAAATTCCAAGAATGGTGTTTTTGAGTACATGGATTTTCATTTTTGTTTTTTTGTGAAATATGAGAATCAATTTGAAAAGTACTTCATGCAATAAAATAAATAAAGGAATTGGAAAGTGTGAATTTTAATTAATAACAATGTGTAGTGAAATTTAAGCACAAATTTTATAAATTGGATGCAAAACGCGTCGTGGGGTTTTATTATTATTTCTTTAATTTAAACTTAGGCGTGAAGATATTAACTTAAAACTTTTAATTCATTATTAAGAAGAAGAAGAAGAAGAAAGAAATAATATTAACGATGATGTGGCAGTTTGAGTGTGGTATTATATATAAACAAAATGATACAGCTGGATTTCTGCACTCACCATAATTAACAATTTAATACTTCAAACCCGTGGTAAACACTTTACTTATTTTTTTTAATACCAATTTTATATTTTTTTGTATATATGTATTTTAATTTTTTAATATCACGTTCTTGTCGGTTTTTATTATAATATTAATGGTCTAATTATATGCATTTTTTAAAAAGTTTTTGGATTTTTTGGTTTAATTAACCAAAGCTAAAAGTAGGTGGAACTTTAAAAATACAATGACTTGGTTAAGTTGAGAAGGGCTTTCAATGGTATTTTGAACATAAAATGTATTATGGAATGAGATTTGATTTGGGGTTTGTTTAATTTGGTAGCAATGGTGAGTGGTTCTTCAAGTATGCAATGGTCATTCTCAAACAAGGTTTCTGCTGTTCCACAATTGCTGTCTTTCAAGGCTTCTCAAGATGAGAGGCAAAGGAAAATCACTGCTGACCCACTCGTCTCTTCAGACATTCATAGGCCATATTCTTCTGTAATTCACCTTTCACTTTCTATCTTTGATGATGCTCTGAGTTTTGATGTAACTATTGAACAATAACAAATGGGCTTTATGATAATTCATTCATTTTGGCTTGTTGGTTTTCTCTTTTGTTTGTAGAAGAATGTAGCTTCAGATAAGAAGCCTGTAAACCAGTATGCAATGGCAGTTAATTACCCTTTCCAAAATGCCGAGGCCCTTTCGCTTCATCGTTCACAAGATGTGAAAATGTTTCCAATTTCCAACCAAGCACCAGTTCCAATGGCTTTCAATGTGCCAGTATTTCAATCCCATTTGGTTTCTTCTCCTCAACCTATGGTTGGTTCCAATGTTAACTTGCAGCCATTTGGTGGGGTTCCAATTGCAACCTCCCTTTCGGTTCCTTTTACCAGCTCTGTTGGTACAACTGAGTTAAGGTACTACTTTTTTTGAGATGGAGCTAGGAAATATTTCATTAGCAAAAACTGTATTCAAATATGATGCTTAACTTACCTCGTCTTTCTAGGAATGTTTCAAAACCTCCCGGTTCGATGGCGCAGCTTACAATCTTTTATGCTGGATCCGTGTGTGTTTATAATGATATATCTCCTGAGAAGGTTTCTGTTCTTCTAAGAACTCTAGTTTGCTTTTGCCTTTTTGCCACTTGGTGAAGAAAAATTTCTCAGTTTATTGTTGTTTTTTTTTGTTCAGGCTCAGGCTGTTATGCTTTTAGCTGGCAGTGGTGGGCTGCCTCAAACACAAAACAACATACTTTCCACAGGTCAAGTGAAGGCATCATTTGCTGGAGAAAATTTCCAAGGAATGCCACACCTTGAGCTATCTACTGCGACTAAACCTATAAAAACCTCAGCTTCTCATCCCAAGCATTCTGAAACTCCCATCGATGCCTGTTCTGTTGCACCAGTTTCCCCGATTCCCCCAACATTCATACCTGCAGGTATAAATCCATTTTTACTCTACTCTACTCCATACGTTTTCAAAAGTGATGACTTTTAACATCAAACATGCTCAAATCCCTCTTGTTGCCTCCTCCCTGCAGCTGTACCTCAGGCTCGAAAGGCATCCTTGGCTCGGTTTTTAGAGAAGCGCAGAGAACGGTAATGATTGCTCAGCCTGGTTCTTTTACTTTGATTGTGTCGTATTTCTGTTTCGAATTGGAATTTCACGTATTCTGTTATGTCGATATTTCTCTTCAGACTACTATCTCACTTTGCTTCTAGACGTAGTTAACGCACTATTAGTTAACAAAGTAAATCTCTGATTTCCAAACGTGCTCTTTTTTATGTTGTTTTTAGGACAAACACTTGTCCCTACAGTGTTGCAAAGAAAACATCAGACTGCTCATCCTCAACCTTGGATCTGATGGCCTGATATTTGCACAATGGCCACCGCCAAGACTTTGGACTCATCACAAATTGGTGTGTCCTCCATATTAGAGAAGTTTAGATATAATCATCTAAAGCAAATTTTGTCAATCTGTTAGCTTAGATTGATTCTTGTTTTTAGTTTTTTTTTTTTTTTTTT TTCACAAGGCCACGAGCCTATTTTATTATTTTATTATTTTTATTTGTACCAACATTAAATTGCTTTTATTTATTTTTAAAATGAAAAGACGTGCTTCTCTTGCTTTGCCTCTTTTTTAAATTTTAATTTCCTTTTCGTTTTTTTTGATATAAAACAATCGAAATTTCTCTCTTTCTTTTTCCCTCCTTGTGTGTGTAGAGAATTTTCATGGTTTAGAAGAACGAGAGTTTTAATTTTACAGATTTCCAAATGGAGTGGGATTTTTTGGGTTTGAATTCCAAGAATGTGGCCATGCCTTTGCCTATGCCTTTGAAGGAAGAATTTCAAGACAATTCTAAGAATTCAGCAATGGTGAGTGGTTCTTCAAGTATGCAATGGTCATTCTCAAACAAGGTTTCTGCTGTTCCACAATTGCTGTCTTTCAAGGCTTCTCAAGATGAGAGGCAAAGGAAAATCACTGCTGACCCACTCGTCTCTTCAGACATTCATAGGCCATATTCTTCTAAGAATGTAGCTTCAGATAAGAAGCCTGTAAACCAGTATGCAATGGCAGTTAATTACCCTTTCCAAAATGCCGAGGCCCTTTCGCTTCATCGTTCACAAGATGTGAAAATGTTTCCAATTTCCAACCAAGCACCAGTTCCAATGGCTTTCAATGTGCCAGTATTTCAATCCCATTTGGTTTCTTCTCCTCAACCTATGGTTGGTTCCAATGTTAACTTGCAGCCATTTGGTGGGGTTCCAATTGCAACCTCCCTTTCGGTTCCTTTTACCAGCTCTGTTGGTACAACTGAGTTAAGGAATGTTTCAAAACCTCCCGGTTCGATGGCGCAGCTTACAATCTTTTATGCTGGATCCGTGTGTGTTTATAATGATATATCTCCTGAGAAGGCTCAGGCTGTTATGCTTTTAGCTGGCAGTGGTGGGCTGCCTCAAACACAAAACAACATACTTTCCACAGGTCAAGTGAAGGCATCATTTGCTGGAGAAAATTTCCAAGGAATGCCACACCTTGAGCTATCTACTGCGACTAAACCTATAAAAACCTCAGCTTCTCATCCCAAGCATTCTGAAACTCCCATCGATGCCTGTTCTGTTGCACCAGTTTCCCCGATTCCCCCAACATTCATACCTGCAGCTGTACCTCAGGCTCGAAAGGCATCCTTGGCTCGGTTTTTAGAGAAGCGCAGAGAACGGACAAACACTTGTCCCTACAGTGTTGCAAAGAAAACATCAGACTGCTCATCCTCAACCTTGGATCTGATGGCCTGATATTTGCACAATGGCCACCGCCAAGACTTTGGACTCATCACAAATTGGTGTGTCCTCCATATTAGAGAAGTTTAGATATAATCATCTAAAGCAAATTTTGTCAATCTGTTAGCTTAGATTGATTCTTGTTTTTAGTTTTTTTTTTTTTTTTTT ATGGAGTGGGATTTTTTGGGTTTGAATTCCAAGAATGTGGCCATGCCTTTGCCTATGCCTTTGAAGGAAGAATTTCAAGACAATTCTAAGAATTCAGCAATGGTGAGTGGTTCTTCAAGTATGCAATGGTCATTCTCAAACAAGGTTTCTGCTGTTCCACAATTGCTGTCTTTCAAGGCTTCTCAAGATGAGAGGCAAAGGAAAATCACTGCTGACCCACTCGTCTCTTCAGACATTCATAGGCCATATTCTTCTAAGAATGTAGCTTCAGATAAGAAGCCTGTAAACCAGTATGCAATGGCAGTTAATTACCCTTTCCAAAATGCCGAGGCCCTTTCGCTTCATCGTTCACAAGATGTGAAAATGTTTCCAATTTCCAACCAAGCACCAGTTCCAATGGCTTTCAATGTGCCAGTATTTCAATCCCATTTGGTTTCTTCTCCTCAACCTATGGTTGGTTCCAATGTTAACTTGCAGCCATTTGGTGGGGTTCCAATTGCAACCTCCCTTTCGGTTCCTTTTACCAGCTCTGTTGGTACAACTGAGTTAAGGAATGTTTCAAAACCTCCCGGTTCGATGGCGCAGCTTACAATCTTTTATGCTGGATCCGTGTGTGTTTATAATGATATATCTCCTGAGAAGGCTCAGGCTGTTATGCTTTTAGCTGGCAGTGGTGGGCTGCCTCAAACACAAAACAACATACTTTCCACAGGTCAAGTGAAGGCATCATTTGCTGGAGAAAATTTCCAAGGAATGCCACACCTTGAGCTATCTACTGCGACTAAACCTATAAAAACCTCAGCTTCTCATCCCAAGCATTCTGAAACTCCCATCGATGCCTGTTCTGTTGCACCAGTTTCCCCGATTCCCCCAACATTCATACCTGCAGCTGTACCTCAGGCTCGAAAGGCATCCTTGGCTCGGTTTTTAGAGAAGCGCAGAGAACGGACAAACACTTGTCCCTACAGTGTTGCAAAGAAAACATCAGACTGCTCATCCTCAACCTTGGATCTGATGGCCTGA MEWDFLGLNSKNVAMPLPMPLKEEFQDNSKNSAMVSGSSSMQWSFSNKVSAVPQLLSFKASQDERQRKITADPLVSSDIHRPYSSKNVASDKKPVNQYAMAVNYPFQNAEALSLHRSQDVKMFPISNQAPVPMAFNVPVFQSHLVSSPQPMVGSNVNLQPFGGVPIATSLSVPFTSSVGTTELRNVSKPPGSMAQLTIFYAGSVCVYNDISPEKAQAVMLLAGSGGLPQTQNNILSTGQVKASFAGENFQGMPHLELSTATKPIKTSASHPKHSETPIDACSVAPVSPIPPTFIPAAVPQARKASLARFLEKRRERTNTCPYSVAKKTSDCSSSTLDLMA
BLAST of CsGy1G007170 vs. NCBI nr
Match: XP_004137510.1 (PREDICTED: protein TIFY 6B isoform X1 [Cucumis sativus] >KGN64185.1 hypothetical protein Csa_1G042920 [Cucumis sativus]) HSP 1 Score: 662.5 bits (1708), Expect = 7.5e-187 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
BLAST of CsGy1G007170 vs. NCBI nr
Match: XP_011650896.1 (PREDICTED: protein TIFY 6B isoform X2 [Cucumis sativus]) HSP 1 Score: 656.0 bits (1691), Expect = 7.1e-185 Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 0
BLAST of CsGy1G007170 vs. NCBI nr
Match: XP_008466122.1 (PREDICTED: protein TIFY 6B-like isoform X1 [Cucumis melo]) HSP 1 Score: 543.9 bits (1400), Expect = 3.9e-151 Identity = 286/308 (92.86%), Postives = 294/308 (95.45%), Query Frame = 0
BLAST of CsGy1G007170 vs. NCBI nr
Match: XP_008466201.1 (PREDICTED: protein TIFY 6B-like isoform X2 [Cucumis melo]) HSP 1 Score: 537.3 bits (1383), Expect = 3.7e-149 Identity = 285/308 (92.53%), Postives = 293/308 (95.13%), Query Frame = 0
BLAST of CsGy1G007170 vs. NCBI nr
Match: XP_022955298.1 (protein TIFY 6B-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 442.2 bits (1136), Expect = 1.6e-120 Identity = 254/376 (67.55%), Postives = 283/376 (75.27%), Query Frame = 0
BLAST of CsGy1G007170 vs. TAIR10
Match: AT3G17860.1 (jasmonate-zim-domain protein 3) HSP 1 Score: 171.8 bits (434), Expect = 7.3e-43 Identity = 152/364 (41.76%), Postives = 195/364 (53.57%), Query Frame = 0
BLAST of CsGy1G007170 vs. TAIR10
Match: AT1G48500.1 (jasmonate-zim-domain protein 4) HSP 1 Score: 112.8 bits (281), Expect = 4.0e-25 Identity = 121/357 (33.89%), Postives = 155/357 (43.42%), Query Frame = 0
BLAST of CsGy1G007170 vs. TAIR10
Match: AT1G70700.1 (TIFY domain/Divergent CCT motif family protein) HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of CsGy1G007170 vs. TAIR10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of CsGy1G007170 vs. TAIR10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein) HSP 1 Score: 58.5 bits (140), Expect = 9.0e-09 Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 0
BLAST of CsGy1G007170 vs. Swiss-Prot
Match: sp|Q9LVI4|TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana OX=3702 GN=TIFY6B PE=1 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.3e-41 Identity = 152/364 (41.76%), Postives = 195/364 (53.57%), Query Frame = 0
BLAST of CsGy1G007170 vs. Swiss-Prot
Match: sp|Q58G47|TIF6A_ARATH (Protein TIFY 6A OS=Arabidopsis thaliana OX=3702 GN=TIFY6A PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.3e-24 Identity = 121/357 (33.89%), Postives = 155/357 (43.42%), Query Frame = 0
BLAST of CsGy1G007170 vs. Swiss-Prot
Match: sp|Q8W4J8|TIF7_ARATH (Protein TIFY 7 OS=Arabidopsis thaliana OX=3702 GN=TIFY7 PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 4.0e-14 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of CsGy1G007170 vs. Swiss-Prot
Match: sp|Q6ES51|TIF6B_ORYSJ (Protein TIFY 6b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY6B PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10 Identity = 84/293 (28.67%), Postives = 114/293 (38.91%), Query Frame = 0
BLAST of CsGy1G007170 vs. Swiss-Prot
Match: sp|Q9LMA8|TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.1e-10 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of CsGy1G007170 vs. TrEMBL
Match: tr|A0A0A0LQI7|A0A0A0LQI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042920 PE=4 SV=1) HSP 1 Score: 662.5 bits (1708), Expect = 5.0e-187 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
BLAST of CsGy1G007170 vs. TrEMBL
Match: tr|A0A1S3CQH5|A0A1S3CQH5_CUCME (protein TIFY 6B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 2.6e-151 Identity = 286/308 (92.86%), Postives = 294/308 (95.45%), Query Frame = 0
BLAST of CsGy1G007170 vs. TrEMBL
Match: tr|A0A1S3CS27|A0A1S3CS27_CUCME (protein TIFY 6B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 2.4e-149 Identity = 285/308 (92.53%), Postives = 293/308 (95.13%), Query Frame = 0
BLAST of CsGy1G007170 vs. TrEMBL
Match: tr|A0A2P4H9N0|A0A2P4H9N0_QUESU (Protein tify 6b OS=Quercus suber OX=58331 GN=CFP56_06845 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.0e-59 Identity = 170/385 (44.16%), Postives = 220/385 (57.14%), Query Frame = 0
BLAST of CsGy1G007170 vs. TrEMBL
Match: tr|A0A1U8VG30|A0A1U8VG30_HEVBR (Jasmonate ZIM-domain protein OS=Hevea brasiliensis OX=3981 GN=JAZ10 PE=2 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 5.2e-59 Identity = 175/382 (45.81%), Postives = 225/382 (58.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |