Carg06635 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06635
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein TIFY 6B-like isoform X1
Location	Cucurbita_argyrosperma_scaffold_012 : 102468 .. 107123 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTTTTTTGAATAAAAAGACGTGCTTCTCTCGCTTTCCTCTCGCATTGATATTAAAAAGCGCTGAAATTCTCTCGTATTTTTTTCTCTCTGCCTATTTCTCTCTCAGTGCGCGCTTCACTTTCATGGTCTTGGAGCTCGAAACTGGCTCGATTCTTCATCGCTTCGAAACTCTGCAGGTATTTTTTCGGCGTTAATTCTTTCGAGGATTTCGAATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGTATGTTCATGTCTCGTCTTCTTCATCATCGTCTTGTTCATCTGTTTCGATTTCCATGGAAGTTTTGTTTGATATCTTGGAAATCTGTTTGGTGAATTTGATACTCGGAAATGTCTCTGCTAGGGCTTAAGTTTGTTGTATCAACGAAATTTCTTTTGGAAAACAGGAAGAGTTAGAGAAGAAATGAAGATTGAGGAAATTATTGTATGAATTTAGAATTTATTTTCTCAGGAACCAAACAGAAAATTAGAAAGGAAAATCTGTTAGAATAGGCGTAAAAACCACGTTTCGCACGCTGTACCGAAATGTAAATTTGATGTGCAAAAGAACTGACAAGCCAAAAAGTTTTTGGGGGAATTTTTTATATTAAAAATAATTGTTTTTAAAAATACATGAATTAAAATATTATTATTTGTGTACTGCGTATAATTTTAATTTTGTTGGAATTTTTTAAATAGGGAAAATGTGAAAATTTGGAAAATAATTTATTAAATTAATCAATGAATTTTGTTCTACATTAATTTAAACTTAACTTTAATCGTTTAATTTATGTATTAAAGAACAGTGACGTGGCAATTTCAGTGCGGTATAAAAGAATAATAACAATAAATAAATAGATAATACAGCTGGATAGCTGCAATGATCATATTAACAATTAAATACTTCAATCCCGTGGTAAACACTCGGTTTATTTTTTTAAAAGAAAAATTAAAGTTTTTTTAATCACACGTCGGTGTGGGTCTTCATTATAATAATGAATCATGGCGATGTAATATTTATTTATTTATTTTTGAAGTTTTTAAGATTTTTTCCGTTAATCTCCCAAGATTATTGATCATAGGATTGTGGATTGAAATTTGATTGGTTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGGTTTCACTTTCTTCATTTTGTTCTTGATTATGCTCTGAATCTGCAATTCTCTGTTTTTTGATTTGTAGTCATCAATGGCTTGGACTCTGTTCATTGATTTGAAGTTGGTGATTTTGTCTTTTGTTTGTAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGTACTTGTTTTTCAAGATGGAGTTGTGAAAGATGTCAAAGCCTAAATGTCTTGAAAATTGATGCTTACTTTTCTTTGTAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGTTTGTGTTTATAATGATGTATCTCCTGAGAAGGTATCTGTTCCTTTAGAAACTCTAATTTCGTTTTGCCTTCTCACCACTTGGGGAAGAATTGTGAGATCCCACGTCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAAACCTCTCTCTAGAAGATGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAACGGAAAACCCAAAGAAGACAATATCTGCTAGTGGTGGGCGATGTGCCAACGAGGACATTGAGTCCCGAAAGGGGGTGGACAAGAGAAGGTGTGCCAGCAAGGACACTGGGCCTCAAAAGGAGGTGGATTGGGGGGTTCCACGTCGATTAGAGAAGGGATCGAGTGTCAGCCAAGATACTGGAACTCGAAAGGGGGTGGATTGGGGGGTTCCACGTCGATTAGAGAAGGGATCGAGTGTCAGCCATGATACTGGAACTCGAAAGGGGGTGGATTATGAGATCCTATATCTGTTGGGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACGCATTTTAAGAACCTTGAGGGAAAACCCGAAAGAAGACAATATCTGTTGACGGTCGGATTTACAAGAATCAATTCTCAGTTCTTGTTGTTTGATGTTTCTATTCAGGCTCAGGCTATAATGCTTCTGGCTGGCACTGGTGGGCTGCCTCAAACAGAAAACAACATACATCCCACCGGTCAAATGAAGGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGGTATAAAGCCACTTCACTCTACTCTAGTCCATATTTTTCCAGAAGTAATGATTTAAACAACAAACATGCTGACATTCCTCCTATCACCTCCTCCCTACAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGGTGAGTTTTCAACCTGGTTCTTTTACTTGAGTGTTTAGTTCTACTTCGACTCGGAATCTCACGAGTTCGTTCTCATGTTGTTTTAGGATAAACACATGCCCCTACAATATTGGAAAGAAAGCATCAGACTGTTCATCCACAACCTTGGATCTGATGGCCTGATGTCTCTCTCGCTTTGGACATACAAAATCGGTTTGTCCTCCATATTAGAGAATTGGATATAAAGCAAAATTTGTCAATCTGTTAGCTTAGATTGATTCTTGGTTTTGTTTTTTTTTTTTATATAATTTTCTTTTGTTCAATTGAAAAGCGCAGTTATTAGTTTCGATTGAACAATATGTAACTTAGTTGCTCCATGTTTATGTAAAATATTGCTTTTTATTTACACCCAGAGAAAAAAAAATGGGATGATATTTTGTATGTAAAACTATTCTGAATGATTCTATATTGTTCTTTCCTCTACTTGAAAACGTGATAGAGAATCAAACTGAAAATGTTTCTCTCTTGGTCCCATTCATCACATGCTGAGAACATTTTGGCTGTGTTCTTTATGATCTTTCTCTCTCTCTCTCTAGACTGTTCTTTAGTGTTCACATGTTCTTTTAAATTTCGAATGAGGAATAATTCCCACAAGAAAAAGTACTTTCGACCAAATATAGAGAAGAGCTTTGGCCATTCCCAGATATTTCTTGTTTCTCTGGATTTACACCAGATTTCCTCGTTGTCTATATTTATTTTGTAACCGCCCAAGTCCACCGCTAGTAGATATTGTCCTCTATTATAGGTTTTTCTTTTCGGGTTTTCCCTTAAAGTTCTTAAAACGCGCTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCATTCTCCTTCCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGGGGTCCAGCGTCCTTGCTGGCATTCGTTCCCTTCTCCGAACTATGTGGGACCCCCCTTCTCCCCCAATCCACCCCCTTCGAGGCACAATGCCCTTGCAGGTACACCGCCTTGTGTCCACATTACCCGATGTCTGGCTCTGATACCATTTGTAACAGTCTAATTCCACCAATATAGCAGATATTGGAAACGAAAGAAAAAACTAGCTGTGTTTGTTGAACTGCGTTGATAGGTAAAATGAAAACTGACATTTAGAATTTCAAGTATAAACATTCTCATGAGCTTGGTCTGAGTATGCATTGCTTTGCTTAAACTTGCTCAAAATGACTTAGCTTGTTTCTTGTTTTTTTGATTCAGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAGAGAGATACAAAGATGATGCTTGCTTCATTTCCTCTCATTCTTGGAGTAAAATCTAAGAACCACATAGAAGAACAGCCGGTAAAGCACCCCCCAAGCTAGTAAGATACCAATGTCATACCATATATTTCGCATATTAACGTCCATCGAGAACAGAACGTCTTCTCCGATCAGCATGCAGTTTGGCTGCAAATCTCTAGAAACATTGTGCAGCTTGCTAATCCTAACATCTCCCAACGGCCCGGGCGAAAGATCGTTGGGATTTCCCTGATAACATCTTTTCCCTTTGAATTCATTGATCAACA

mRNA sequence

ATTTATTTTTTTGAATAAAAAGACGTGCTTCTCTCGCTTTCCTCTCGCATTGATATTAAAAAGCGCTGAAATTCTCTCGTATTTTTTTCTCTCTGCCTATTTCTCTCTCAGTGCGCGCTTCACTTTCATGGTCTTGGAGCTCGAAACTGGCTCGATTCTTCATCGCTTCGAAACTCTGCAGGTATTTTTTCGGCGTTAATTCTTTCGAGGATTTCGAATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAGAGAGATACAAAGATGATGCTTGCTTCATTTCCTCTCATTCTTGGAGTAAAATCTAAGAACCACATAGAAGAACAGCCGGTAAAGCACCCCCCAAGCTAGTAAGATACCAATGTCATACCATATATTTCGCATATTAACGTCCATCGAGAACAGAACGTCTTCTCCGATCAGCATGCAGTTTGGCTGCAAATCTCTAGAAACATTGTGCAGCTTGCTAATCCTAACATCTCCCAACGGCCCGGGCGAAAGATCGTTGGGATTTCCCTGATAACATCTTTTCCCTTTGAATTCATTGATCAACA

Coding sequence (CDS)

ATGGAGAGAGATTTCTTAGGTTTGAACTCGAAGAATGACGCTATGGCGTCGAGAGAAGATTTCTCAGATTCTTCTAAGAATTCAGGCATGCAGTGGGCATTCTCAAACAAAGTTTCTGCTCTTCCCCAGTTGCTGTCTTTCAAGGCTGCTCAAGATGAGAAGCAAAGGAAAATTGTTGTTGATCCATTGGTCTCTTCTGACCTTTCAAATCTTACCCATAGGCCATATTCTTCTGTGATTCAGAAGAATGTAGTTCTAGATAAGAAGGCTGGTAACCAGTATGCAATGGCGGTTTATCCGTTCCAAAATGGCGAGGCGATTTCGGTACATCGTTCACAAGATGTGAAGATGTTTCCAATCTCGAACCAAACTAAAACTAACAATGCTGTTCCTGTGGCTTTCAATGTTCCGGTGTTTCAATCCCAGTTGGTTTCTTCTGGCCAAGCTGTGGTTGGTTCCAATGTTAACTTGCAATTTGGTGGTGTTCCAATTGCGACCTCTGTTTCTGTTCCTTTCACGAGCTCGGTCATCGGTAGCACGGAGCTAAGGAATGCTTCGAAACCTCCAGGTTCAACGCCGCAGCTGACAATCTTCTATGCAGGATCTGCATCATTCCCCAACGAAAACTTCCAAGGAATGCCACTCCTTGGCCTTTCAAGTCCACCTTCTGTTGCACATTCTAAGAGTCCTAATGCAGGGTTAGGATCTTGTAGTAAAATTGAGCTACCTGCTGCACCAAAACGTATGCAAACCCCAGCATCCCATTCAAACTATTCCGAACCTCCTAAGGATGCTCGTTCCATTGCACCTATTGCCACGACATTCATACCTGCAGCTGTGCCTCAGGCTCGAAAAGCATCCTTGACTCGGTTTCTAGAGAAGCGCAAGGAACGCCTCTGGAAAGCGATTCTGGTGGCATTACAATCTTCAACTTATTCCCATTCAAAAGCCTAG

Protein sequence

MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQFGGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAAVPQARKASLTRFLEKRKERLWKAILVALQSSTYSHSKA

Homology

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BLAST of Carg06635 vs. NCBI nr
Match: XP_022955298.1 (protein TIFY 6B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 544.3 bits (1401), Expect = 2.8e-151
Identity = 296/338 (87.57%), Postives = 298/338 (88.17%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]

BLAST of Carg06635 vs. NCBI nr
Match: XP_023542531.1 (protein TIFY 6B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.1 bits (1398), Expect = 6.2e-151
Identity = 295/338 (87.28%), Postives = 298/338 (88.17%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]

BLAST of Carg06635 vs. NCBI nr
Match: XP_022994524.1 (protein TIFY 6B-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 538.1 bits (1385), Expect = 2.0e-149
Identity = 293/338 (86.69%), Postives = 297/338 (87.87%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGM+WAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMKWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNV+LQ FGGVPIATSVSVP TSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVSLQPFGGVPIATSVSVPLTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNIHPTGQM 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGL SPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLPSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]

BLAST of Carg06635 vs. NCBI nr
Match: XP_022955299.1 (protein TIFY 6B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 2.6e-149
Identity = 295/338 (87.28%), Postives = 297/338 (87.87%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQ NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQ-NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]

BLAST of Carg06635 vs. NCBI nr
Match: XP_023542533.1 (protein TIFY 6B-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 536.6 bits (1381), Expect = 5.8e-149
Identity = 294/338 (86.98%), Postives = 297/338 (87.87%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60
           MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV
Sbjct: 1   MERDFLGLNSKNDAMASREDFSDSSKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVV 60

Query: 61  DPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120
           DPLVSSDLSNLTHRPYSSVIQ NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI
Sbjct: 61  DPLVSSDLSNLTHRPYSSVIQ-NVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPI 120

Query: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGS 180
           SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ FGGVPIATSVSVPFTSSVIGS
Sbjct: 121 SNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQPFGGVPIATSVSVPFTSSVIGS 180

Query: 181 TELRNASKPPGSTPQLTIFYAGS------------------------------------- 240
           TELRNASKPPGSTPQLTIFYAGS                                     
Sbjct: 181 TELRNASKPPGSTPQLTIFYAGSVCVYNDVSPEKAQAIMLLAGTGGLPQTENNVHPIGQV 240

Query: 241 -ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEP 300
            ASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKR+QTPASHSNYSEP
Sbjct: 241 KASFPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRIQTPASHSNYSEP 300

[Close]

BLAST of Carg06635 vs. TAIR10
Match: AT3G17860.1 (jasmonate-zim-domain protein 3)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-25
Identity = 121/348 (34.77%), Postives = 167/348 (47.99%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSK----NSGMQWAFSNKVSA-LPQLLSFKAAQDEKQ 60
           MERDFLGL SKN  +  +E+ S+SS+    N GM W+FSNKVSA   Q LSF+  Q+++ 
Sbjct: 1   MERDFLGLGSKNSPITVKEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDRH 60

Query: 61  RKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDV 120
           RK           S   H P+S     + V D     + A    P+ +         Q V
Sbjct: 61  RK-----------SGNYHLPHSGSFMPSSVADVYDSTRKA----PYSS--------VQGV 120

Query: 121 KMFPISNQTKTNNAVPVAFNVPVFQS-QLVSSGQAVVGSNVNLQ-FGGVPI-ATSVSV-P 180
           +MFP SNQ +  NA  V+ ++P FQS      G++ + +  N Q   GVPI A  +S+ P
Sbjct: 121 RMFPNSNQHEETNA--VSMSMPGFQSHHYAPGGRSFMNNXXNSQPLVGVPIMAPPISILP 180

Query: 181 FTSSVIGSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLG--------LS 240
              S++G+T++R++SKP GS  QLTIFYAGS         E  + + LL         + 
Sbjct: 181 PPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVF 240

Query: 241 SPPS-----VAHSK-------------------SPNAGLGS----CSKIELPAAPKRMQT 300
           SPP      V H++                   SP AG  +     +K            
Sbjct: 241 SPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNN 300

[Close]

BLAST of Carg06635 vs. TAIR10
Match: AT1G48500.1 (jasmonate-zim-domain protein 4)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-13
Identity = 100/327 (30.58%), Postives = 139/327 (42.51%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFS-DSSKNSG-MQWAFSNKVSALPQLLSFKAAQDEKQRKI 60
           MERDFLGL SK   +  +E+ + DS+ + G M W+FS+KV + PQ LSF  +Q E +   
Sbjct: 1   MERDFLGLGSKLSPITVKEETNEDSAPSRGMMDWSFSSKVGSGPQFLSFGTSQQETRVNT 60

Query: 61  VVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMF 120
           V D L+SS   +   R Y S +Q++                                ++F
Sbjct: 61  VNDHLLSSAAMDQNQRTYFSSLQED--------------------------------RVF 120

Query: 121 PISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVI 180
           P S+Q +    + V+ + P +           + S +N Q  GG PI      P  S   
Sbjct: 121 PGSSQ-QDQTTITVSMSEPNY-----------INSFINHQHLGGSPI----MAPPVSVFP 180

Query: 181 GSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLGLSSPPS---------- 240
             T +R++SKP    PQLTIFYAGS         E  Q + LL  + P +          
Sbjct: 181 APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQK 240

Query: 241 -VAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSE---PPKDARSIA------PIAT 300
            V HS                 +    +T +S SN      P K   S+A        A 
Sbjct: 241 LVHHSLPTTDXXXXXXXXXXXISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAF 277

[Close]

BLAST of Carg06635 vs. TAIR10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12)

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 160 GGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLS 219
           G   I  + SV  + + + STE++ A +P     QLTIF+ GS +     F G+P   + 
Sbjct: 24  GAAEIGGTGSVEKSINEVRSTEIQTA-EPTVPPNQLTIFFGGSVTV----FDGLPSEKVQ 83

Query: 220 SPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAA 279
               +A          S S +  PA   R  + +S SN + P      I PI+     A 
Sbjct: 84  EILRIAAKAMETKNSTSISPVSSPAL-NRAPSFSSTSNVASPAAQPFPIQPISFCRSTAD 143

Query: 280 VPQARKASLTRFLEKRKERL 300
           +P AR+ SL RFLEKR++RL
Sbjct: 144 LPIARRHSLQRFLEKRRDRL 157

[Close]

BLAST of Carg06635 vs. TAIR10
Match: AT1G70700.1 (TIFY domain/Divergent CCT motif family protein)

HSP 1 Score: 43.5 bits (101), Expect = 2.8e-04
Identity = 53/165 (32.12%), Postives = 71/165 (43.03%), Query Frame = 0


Query: 158 QFGG-----VPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPN----E 217
           QFGG      P+    SVP  +    S   R AS   GS+PQLTIFY G+ S  N    +
Sbjct: 82  QFGGAFQNATPLLLGGSVPLPTH--PSLVPRVASS--GSSPQLTIFYGGTISVFNDISPD 141

Query: 218 NFQGMPLLGLSSPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSI 277
             Q + L   +          P          ++        + A+H++     +D    
Sbjct: 142 KAQAIMLCAGNGLKGETGDSKPVREAERMYGKQIHNTAATSSSSATHTDNFSRCRDTPVA 201

Query: 278 APIATTFIPA----------AVPQARKASLTRFLEKRKERLWKAI 304
           A  A + I +          +VPQARKASL RFLEKRKERL  A+
Sbjct: 202 ATNAMSMIESFNAAPRNMIPSVPQARKASLARFLEKRKERLMSAM 242

[Close]

BLAST of Carg06635 vs. Swiss-Prot
Match: sp|Q9LVI4|TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana OX=3702 GN=TIFY6B PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.2e-24
Identity = 121/348 (34.77%), Postives = 167/348 (47.99%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSK----NSGMQWAFSNKVSA-LPQLLSFKAAQDEKQ 60
           MERDFLGL SKN  +  +E+ S+SS+    N GM W+FSNKVSA   Q LSF+  Q+++ 
Sbjct: 1   MERDFLGLGSKNSPITVKEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDRH 60

Query: 61  RKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDV 120
           RK           S   H P+S     + V D     + A    P+ +         Q V
Sbjct: 61  RK-----------SGNYHLPHSGSFMPSSVADVYDSTRKA----PYSS--------VQGV 120

Query: 121 KMFPISNQTKTNNAVPVAFNVPVFQS-QLVSSGQAVVGSNVNLQ-FGGVPI-ATSVSV-P 180
           +MFP SNQ +  NA  V+ ++P FQS      G++ + +  N Q   GVPI A  +S+ P
Sbjct: 121 RMFPNSNQHEETNA--VSMSMPGFQSHHYAPGGRSFMNNXXNSQPLVGVPIMAPPISILP 180

Query: 181 FTSSVIGSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLG--------LS 240
              S++G+T++R++SKP GS  QLTIFYAGS         E  + + LL         + 
Sbjct: 181 PPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVF 240

Query: 241 SPPS-----VAHSK-------------------SPNAGLGS----CSKIELPAAPKRMQT 300
           SPP      V H++                   SP AG  +     +K            
Sbjct: 241 SPPQTHQQVVHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGATKATRGLTSTYHNN 300

[Close]

BLAST of Carg06635 vs. Swiss-Prot
Match: sp|Q58G47|TIF6A_ARATH (Protein TIFY 6A OS=Arabidopsis thaliana OX=3702 GN=TIFY6A PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.5e-12
Identity = 100/327 (30.58%), Postives = 139/327 (42.51%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFS-DSSKNSG-MQWAFSNKVSALPQLLSFKAAQDEKQRKI 60
           MERDFLGL SK   +  +E+ + DS+ + G M W+FS+KV + PQ LSF  +Q E +   
Sbjct: 1   MERDFLGLGSKLSPITVKEETNEDSAPSRGMMDWSFSSKVGSGPQFLSFGTSQQETRVNT 60

Query: 61  VVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMF 120
           V D L+SS   +   R Y S +Q++                                ++F
Sbjct: 61  VNDHLLSSAAMDQNQRTYFSSLQED--------------------------------RVF 120

Query: 121 PISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVI 180
           P S+Q +    + V+ + P +           + S +N Q  GG PI      P  S   
Sbjct: 121 PGSSQ-QDQTTITVSMSEPNY-----------INSFINHQHLGGSPI----MAPPVSVFP 180

Query: 181 GSTELRNASKPPGSTPQLTIFYAGSA----SFPNENFQGMPLLGLSSPPS---------- 240
             T +R++SKP    PQLTIFYAGS         E  Q + LL  + P +          
Sbjct: 181 APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKPVSQPKPQK 240

Query: 241 -VAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSE---PPKDARSIA------PIAT 300
            V HS                 +    +T +S SN      P K   S+A        A 
Sbjct: 241 LVHHSLPTTDXXXXXXXXXXXISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQTAAF 277

[Close]

BLAST of Carg06635 vs. Swiss-Prot
Match: sp|Q9C5K8|TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana OX=3702 GN=TIFY3B PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 160 GGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPNENFQGMPLLGLS 219
           G   I  + SV  + + + STE++ A +P     QLTIF+ GS +     F G+P   + 
Sbjct: 24  GAAEIGGTGSVEKSINEVRSTEIQTA-EPTVPPNQLTIFFGGSVTV----FDGLPSEKVQ 83

Query: 220 SPPSVAHSKSPNAGLGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIATTFIPAA 279
               +A          S S +  PA   R  + +S SN + P      I PI+     A 
Sbjct: 84  EILRIAAKAMETKNSTSISPVSSPAL-NRAPSFSSTSNVASPAAQPFPIQPISFCRSTAD 143

Query: 280 VPQARKASLTRFLEKRKERL 300
           +P AR+ SL RFLEKR++RL
Sbjct: 144 LPIARRHSLQRFLEKRRDRL 157

[Close]

BLAST of Carg06635 vs. TrEMBL
Match: tr|A0A0A0LQI7|A0A0A0LQI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042920 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 205/328 (62.50%), Postives = 229/328 (69.82%), Query Frame = 0


Query: 1   MERDFLGLNSKNDA----MASREDFSDSSKN-------SGMQWAFSNKVSALPQLLSFKA 60
           ME DFLGLNSKN A    M  +E+F D+SKN       S MQW+FSNKVSA+PQLLSFKA
Sbjct: 1   MEWDFLGLNSKNVAMPLPMPLKEEFQDNSKNSAMVSGSSSMQWSFSNKVSAVPQLLSFKA 60

Query: 61  AQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAV-YPFQNGEAIS 120
           +QDE+QRKI  DPLVSSD+    HRPYSS   KNV  DKK  NQYAMAV YPFQN EA+S
Sbjct: 61  SQDERQRKITADPLVSSDI----HRPYSS---KNVASDKKPVNQYAMAVNYPFQNAEALS 120

Query: 121 VHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVPIATS 180
           +HRSQDVKMFPISNQ      VP+AFNVPVFQS LVSS Q +VGSNVNLQ FGGVPIATS
Sbjct: 121 LHRSQDVKMFPISNQA----PVPMAFNVPVFQSHLVSSPQPMVGSNVNLQPFGGVPIATS 180

Query: 181 VSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPN----ENFQGMPLL-GLSSPP 240
           +SVPFTSSV G+TELRN SKPPGS  QLTIFYAGS    N    E  Q + LL G    P
Sbjct: 181 LSVPFTSSV-GTTELRNVSKPPGSMAQLTIFYAGSVCVYNDISPEKAQAVMLLAGSGGLP 240

Query: 241 -------SVAHSKSPNAG--LGSCSKIELPAAPKRMQTPASHSNYSEPPKDARSIAPIA- 299
                  S    K+  AG        +EL  A K ++T ASH  +SE P DA S+AP++ 
Sbjct: 241 QTQNNILSTGQVKASFAGENFQGMPHLELSTATKPIKTSASHPKHSETPIDACSVAPVSP 300

[Close]

BLAST of Carg06635 vs. TrEMBL
Match: tr|A0A1S3CQH5|A0A1S3CQH5_CUCME (protein TIFY 6B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.4e-77
Identity = 186/293 (63.48%), Postives = 209/293 (71.33%), Query Frame = 0


Query: 25  SKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNV 84
           S +S MQW+FSNKVSA+PQLLSFKA+QDEK +K++ DPLVSSD+    HRPYSS   KNV
Sbjct: 3   SGSSSMQWSFSNKVSAVPQLLSFKASQDEKPKKVIADPLVSSDI----HRPYSS---KNV 62

Query: 85  VLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLV 144
             DKK  NQYAMAVYPFQN EA+   RSQDVKMFPISNQ    + VP+AFNVPVFQS LV
Sbjct: 63  ASDKKPVNQYAMAVYPFQNTEALLFPRSQDVKMFPISNQ----SPVPMAFNVPVFQSHLV 122

Query: 145 SSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSA 204
           SS Q +VGSNVNLQ FGGVPIATS+SVPFTSSV+G+TELRN SKPPGS  QLTIFYAGS 
Sbjct: 123 SSPQPMVGSNVNLQPFGGVPIATSLSVPFTSSVVGTTELRNVSKPPGSMSQLTIFYAGSV 182

Query: 205 SFPN----ENFQGMPLL-GLSSPP-------SVAHSKSPNAG--LGSCSKIELPAAPKRM 264
              N    E  Q + LL G    P       S    K+  AG        +ELP A K +
Sbjct: 183 CVYNDISPEKAQAVMLLAGSGGLPQTQNNILSTGQMKASFAGESFQGMPHLELPTATKPI 242

Query: 265 QTPASHSNYSEPPKDARSIA---PIATTFIPAAVPQARKASLTRFLEKRKERL 300
           +  ASH  +SEPP DA S+A   PI  TFIPAAVPQARKASL RFLEKRKER+
Sbjct: 243 KPSASHPKHSEPPIDAGSVASVSPIPPTFIPAAVPQARKASLARFLEKRKERI 284

[Close]

BLAST of Carg06635 vs. TrEMBL
Match: tr|A0A1S3CS27|A0A1S3CS27_CUCME (protein TIFY 6B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.7e-77
Identity = 185/293 (63.14%), Postives = 208/293 (70.99%), Query Frame = 0


Query: 25  SKNSGMQWAFSNKVSALPQLLSFKAAQDEKQRKIVVDPLVSSDLSNLTHRPYSSVIQKNV 84
           S +S MQW+FSNKVSA+PQLLSFKA+QDEK +K++ DPLVSSD+    HRPYSS    NV
Sbjct: 3   SGSSSMQWSFSNKVSAVPQLLSFKASQDEKPKKVIADPLVSSDI----HRPYSS----NV 62

Query: 85  VLDKKAGNQYAMAVYPFQNGEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLV 144
             DKK  NQYAMAVYPFQN EA+   RSQDVKMFPISNQ    + VP+AFNVPVFQS LV
Sbjct: 63  ASDKKPVNQYAMAVYPFQNTEALLFPRSQDVKMFPISNQ----SPVPMAFNVPVFQSHLV 122

Query: 145 SSGQAVVGSNVNLQ-FGGVPIATSVSVPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSA 204
           SS Q +VGSNVNLQ FGGVPIATS+SVPFTSSV+G+TELRN SKPPGS  QLTIFYAGS 
Sbjct: 123 SSPQPMVGSNVNLQPFGGVPIATSLSVPFTSSVVGTTELRNVSKPPGSMSQLTIFYAGSV 182

Query: 205 SFPN----ENFQGMPLL-GLSSPP-------SVAHSKSPNAG--LGSCSKIELPAAPKRM 264
              N    E  Q + LL G    P       S    K+  AG        +ELP A K +
Sbjct: 183 CVYNDISPEKAQAVMLLAGSGGLPQTQNNILSTGQMKASFAGESFQGMPHLELPTATKPI 242

Query: 265 QTPASHSNYSEPPKDARSIA---PIATTFIPAAVPQARKASLTRFLEKRKERL 300
           +  ASH  +SEPP DA S+A   PI  TFIPAAVPQARKASL RFLEKRKER+
Sbjct: 243 KPSASHPKHSEPPIDAGSVASVSPIPPTFIPAAVPQARKASLARFLEKRKERI 283

[Close]

BLAST of Carg06635 vs. TrEMBL
Match: tr|U5FRP6|U5FRP6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G035800v3 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.2e-51
Identity = 152/376 (40.43%), Postives = 212/376 (56.38%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDS-------SKNSGMQWAFSNKVSALPQLLSFKAAQDE 60
           MERDFLGL SKN+ +  +E+ +D+        + SGMQW+FSNKVSA+PQ LSFK++ ++
Sbjct: 1   MERDFLGLGSKNNPVTIKEEATDTPLKDSVPMRGSGMQWSFSNKVSAIPQFLSFKSSMED 60

Query: 61  KQRKIVVDPLVSS----------DLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQN 120
           K RK V DP+ SS          D  +   + YS++IQKN+ LDK+AGN YAM  Y  Q+
Sbjct: 61  KPRKAVHDPMASSSSGYMSISTADAFDSNQKSYSALIQKNMALDKQAGNHYAMTTYGKQH 120

Query: 121 GEAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSN--VNLQFGG 180
            +A   +R QD++MFPIS+Q   N  + V+ + P+ QS    +G +++ SN  V+   GG
Sbjct: 121 FDAYFANRPQDMRMFPISSQ--QNQTINVSMSSPILQSLFPPTGHSMITSNSIVSKPLGG 180

Query: 181 VPIATSVS-VPFTSSVIGSTELRNASKPPGSTPQLTIFYAGSASFPN----ENFQGMPLL 240
           VP+ T  S +P  SSVIG+T+LR+ +K  G+  QLTIFYAGS S  +    E  Q + LL
Sbjct: 181 VPVITPASALPTPSSVIGTTDLRDVAKSSGAPAQLTIFYAGSVSVYDDVSPEKAQAIMLL 240

Query: 241 G------------LSSPPSVAHSKSPNAGLGSC---SKIELPAAPKRMQTPASHSNYS-- 300
                        +S+P + A +  P   +G     +KI   A    M +P S ++ S  
Sbjct: 241 AGNGGSSGTQNKPISTPQAQAQAPIPGPPVGDIFVGNKINTTAPCSGMPSPISVTSSSTN 300

Query: 301 ------------------EPPKDARSIAPIATTFIPA-AVPQARKASLTRFLEKRKERLW 317
                             EP K A S+ P + T +PA AVPQARKASL RFLEKRKER+ 
Sbjct: 301 DLAIVKPVVNLAPSVKHIEPTKPASSVGPTSATLVPAVAVPQARKASLARFLEKRKERV- 360

[Close]

BLAST of Carg06635 vs. TrEMBL
Match: tr|A0A1U8ATU1|A0A1U8ATU1_NELNU (protein TIFY 6B-like OS=Nelumbo nucifera OX=4432 GN=LOC104607376 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.0e-48
Identity = 139/360 (38.61%), Postives = 192/360 (53.33%), Query Frame = 0


Query: 1   MERDFLGLNSKNDAMASREDFSDSSKNS------GMQWAFSNKVSALPQ-LLSFKAAQDE 60
           MERDFLGL+SK      +E+  D+SK+S      GMQW FSNKVSA+PQ ++ FKA Q++
Sbjct: 1   MERDFLGLSSKESVTLVKEETKDASKDSVFMRGPGMQWPFSNKVSAIPQFIMPFKAGQED 60

Query: 61  KQRKIVVDPLVSS---------DLSNLTHRPYSSVIQKNVVLDKKAGNQYAMAVYPFQNG 120
           + +KIV DPL SS         D  +  H+  S ++QK+   D++ G  YAM+ YP Q+ 
Sbjct: 61  RAKKIVFDPLASSGFIPAIATADAFDANHKSTSGMVQKSFNFDRQGGTHYAMSAYPIQHV 120

Query: 121 EAISVHRSQDVKMFPISNQTKTNNAVPVAFNVPVFQSQLVSSGQAVVGSNVNLQ-FGGVP 180
           +A + HR  DV+MF      + N A+ VA N P F++ + ++GQ++  +NV  Q  GG+P
Sbjct: 121 DAHATHRPTDVRMF------QANQAISVAMNNPFFKTNIATTGQSMAAANVKQQPLGGIP 180

Query: 181 IATSVSV-PFTSSVIGSTELRNASKPPGSTPQLTIFYAGSAS------------------ 240
           + TS S+ P  SS+  + + RN SKP G+  QLTIFY G+ S                  
Sbjct: 181 VGTSHSILPTVSSMARAIDPRNISKPSGAPAQLTIFYGGAVSVYDDITPEKAQAIMFFAA 240

Query: 241 -------------------------FPNENFQGMPLLGLSSPPSVAHSKSPNAGLGSCSK 300
                                      N+++   P  GLSSP SV+   +  +G GS S 
Sbjct: 241 SGSSVTNPRAQVQAPTPKPAASEGLHGNQSYAASPCSGLSSPISVSSHATAQSGSGSSSP 300

The following BLAST results are available for this feature:

BLAST of Carg06635 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955298.1	2.8e-151	87.57	protein TIFY 6B-like isoform X1 [Cucurbita moschata]	[more]
XP_023542531.1	6.2e-151	87.28	protein TIFY 6B-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022994524.1	2.0e-149	86.69	protein TIFY 6B-like isoform X1 [Cucurbita maxima]	[more]
XP_022955299.1	2.6e-149	87.28	protein TIFY 6B-like isoform X2 [Cucurbita moschata]	[more]
XP_023542533.1	5.8e-149	86.98	protein TIFY 6B-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg06635 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17860.1	2.9e-25	34.77	jasmonate-zim-domain protein 3	[more]
AT1G48500.1	1.9e-13	30.58	jasmonate-zim-domain protein 4	[more]
AT5G20900.1	1.1e-05	32.86	jasmonate-zim-domain protein 12	[more]
AT1G70700.1	2.8e-04	32.12	TIFY domain/Divergent CCT motif family protein	[more]

BLAST of Carg06635 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LVI4\|TIF6B_ARATH	5.2e-24	34.77	Protein TIFY 6B OS=Arabidopsis thaliana OX=3702 GN=TIFY6B PE=1 SV=1	[more]
sp\|Q58G47\|TIF6A_ARATH	3.5e-12	30.58	Protein TIFY 6A OS=Arabidopsis thaliana OX=3702 GN=TIFY6A PE=1 SV=1	[more]
sp\|Q9C5K8\|TIF3B_ARATH	2.1e-04	32.86	Protein TIFY 3B OS=Arabidopsis thaliana OX=3702 GN=TIFY3B PE=1 SV=1	[more]

BLAST of Carg06635 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQI7\|A0A0A0LQI7_CUCSA	2.0e-81	62.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042920 PE=4 SV=1	[more]
tr\|A0A1S3CQH5\|A0A1S3CQH5_CUCME	1.4e-77	63.48	protein TIFY 6B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=...	[more]
tr\|A0A1S3CS27\|A0A1S3CS27_CUCME	6.7e-77	63.14	protein TIFY 6B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503612 PE=4 SV=...	[more]
tr\|U5FRP6\|U5FRP6_POPTR	2.2e-51	40.43	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G035800v3 PE=...	[more]
tr\|A0A1U8ATU1\|A0A1U8ATU1_NELNU	5.0e-48	38.61	protein TIFY 6B-like OS=Nelumbo nucifera OX=4432 GN=LOC104607376 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018467	CCT_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06635-RA	Carg06635-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	CCT_2	coord: 281..299 e-value: 5.5E-10 score: 38.9
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 1..203 coord: 213..303
None	No IPR available	PANTHER	PTHR33077:SF37	PROTEIN TIFY 7	coord: 1..203 coord: 213..303

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06635	Cla018445	Watermelon (97103) v1	carwmB0493
Carg06635	Csa1G042920	Cucumber (Chinese Long) v2	carcuB0523
Carg06635	MELO3C002143	Melon (DHL92) v3.5.1	carmeB0499
Carg06635	ClCG04G010520	Watermelon (Charleston Gray)	carwcgB0481
Carg06635	CSPI01G07320	Wild cucumber (PI 183967)	carcpiB0531
Carg06635	Cucsa.122030	Cucumber (Gy14) v1	carcgyB0568
Carg06635	CmaCh18G000800	Cucurbita maxima (Rimu)	carcmaB0692
Carg06635	CmaCh13G009820	Cucurbita maxima (Rimu)	carcmaB0690
Carg06635	CmoCh18G000610	Cucurbita moschata (Rifu)	carcmoB0673
Carg06635	CmoCh13G010160	Cucurbita moschata (Rifu)	carcmoB0671
Carg06635	Lsi02G002450	Bottle gourd (USVL1VR-Ls)	carlsiB447
Carg06635	Cp4.1LG09g11080	Cucurbita pepo (Zucchini)	carcpeB0694
Carg06635	Cp4.1LG20g01660	Cucurbita pepo (Zucchini)	carcpeB0696
Carg06635	CsGy1G007170	Cucumber (Gy14) v2	carcgybB0500
Carg06635	MELO3C002143.2	Melon (DHL92) v3.6.1	carmedB0504
Carg06635	CsaV3_1G007260	Cucumber (Chinese Long) v3	carcucB0529
Carg06635	Cla97C04G077350	Watermelon (97103) v2	carwmbB0518
Carg06635	Bhi08G001086	Wax gourd	carwgoB0600

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06635	Carg04855	Silver-seed gourd	carcarB411

The following block(s) are covering this gene:

None