CsGy1G006980 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGTTTTAACTATTCAAACTAAAACATCAAAATTACAAATATGTTCTCTTTTTCTTTTTCAATCTCTGATTACTGGAAGACCACAAGAAAGGGAGAGGAAAAAAATGGATAAACAGAAAGAGCCACCATTTAAATATCAGAAAAAGGGATAAGGTAGGGACAAGGATAATCATCCATTTCTTCGTAGTTTTACAATTATAACTGTTTGTTCTAACTTCTTGTTGGTTGTGATCATGGCTTCTCTTTTCGGATCAACTTCATTTCTCTCCCACCCACTTACTAGAACTTATCACTTAGCTTCCTCACAAACCCCTTCACCTTCAACCCCACCTTCCCAACCGCCGCAAACTCCGCCGTCCCCATCTCCATCTCTGAGCGCTTCTTCATCGGAGCAACTTAAACCAGCCCCATCAAAGGTGGAACAACAGAGGTCTACCACCAATGTCGATTCTACGGATTGGATTGCTTCAACTTTGACAAGACGATTTGGGCTTGGCGCTGGCCTTGCGTGGGCTGCTTTTCTCGCCGTTGGTGTAGTCTCCGAACAAATCAAAACTCGCCTCGAAGTCTCTCAAGAAGAAGCTAATACAAGGTCTTCAATCCATTTGCCTTTTCAATGATTTTCATGCTATTCTTGTTCTGAGCACGTAATTTCCTTAGCATCAGAATGGCTTTTATTATAAAAAAAGAAAAATTGAATTAAGAACAATAGAACATGAACCCATTTTTCAAAATTATGATTTGTTTTACCATTAACAATGTGCTTCCATAACCAAGCATTGAATCCTGCAGAAACGTTGAAAAGGAAGAGGAAGTGGTGCTACCCAATGGCATAAGGTGCATATCTAACATATTAACTTAGCCTTTTTCTCATTATGTGCATGTTCAAGTTTTACAAGATTTAAGAGAATTTATGACTATAACAGTATCCTTGGATTCTAACATGGTCCAAGAGATTTTGATGATGCAAAACAGGTATTATGAGCTGCGAGTAGGCGGCGGCGCCGTACCGAGGACGGGGGACTTGGTTGTGATTGATCTGAAGGGAAAAATACAAGGAACTGATGAAGTATTCGTAGATACATTTGGAAAGGAAAGAAAGCCACTGGCTTTGGTGATGGGCTCAAGACCTTACAGCAAAGGAATGTGTGAAGGCTTGGAATATGTGCTGAGATCCATGAAATCAGGTGGTAAGAGGAGAGTTATAATTCCTTCAAGTTTGGGGTTTGGAGAGAATGGTGCTGACTTAGGAACTGGGGTTCAAATTCCTCCATTTGCAACTTTAGAGTATGTAATTGAGATTGATAAGGTTTCCATTGCACCTGCTTGAACTGATCTTTGATGCACATAGCTAAACAATAGAACATATTTTGCTTCTCTTCTTCCTTGCATTTCTTTTTTTCTTTCCTTTTCAGGTGTTTGTTTCCCAGATGATTTTTTGTTCCTTTGCAGTTCATCAAAATATAGAGAAAGGAACACAACAGAAGGATCCTTTCATTAGCTTTCTATCTTTCCCCATGAACTCTGCAATATGGTTTGGAATAATATTAATACATTCTATTGTTTTCTGTTATTTTGTAATCTAAATATGGACTTTAAGTAATATTCAAGATATAAATGTGTTGAGTTATTTTTCTAGAAAAATAA AAAAGTTTTAACTATTCAAACTAAAACATCAAAATTACAAATATGTTCTCTTTTTCTTTTTCAATCTCTGATTACTGGAAGACCACAAGAAAGGGAGAGGAAAAAAATGGATAAACAGAAAGAGCCACCATTTAAATATCAGAAAAAGGGATAAGGTAGGGACAAGGATAATCATCCATTTCTTCGTAGTTTTACAATTATAACTGTTTGTTCTAACTTCTTGTTGGTTGTGATCATGGCTTCTCTTTTCGGATCAACTTCATTTCTCTCCCACCCACTTACTAGAACTTATCACTTAGCTTCCTCACAAACCCCTTCACCTTCAACCCCACCTTCCCAACCGCCGCAAACTCCGCCGTCCCCATCTCCATCTCTGAGCGCTTCTTCATCGGAGCAACTTAAACCAGCCCCATCAAAGGTGGAACAACAGAGGTCTACCACCAATGTCGATTCTACGGATTGGATTGCTTCAACTTTGACAAGACGATTTGGGCTTGGCGCTGGCCTTGCGTGGGCTGCTTTTCTCGCCGTTGGTGTAGTCTCCGAACAAATCAAAACTCGCCTCGAAGTCTCTCAAGAAGAAGCTAATACAAGAAACGTTGAAAAGGAAGAGGAAGTGGTGCTACCCAATGGCATAAGGTATTATGAGCTGCGAGTAGGCGGCGGCGCCGTACCGAGGACGGGGGACTTGGTTGTGATTGATCTGAAGGGAAAAATACAAGGAACTGATGAAGTATTCGTAGATACATTTGGAAAGGAAAGAAAGCCACTGGCTTTGGTGATGGGCTCAAGACCTTACAGCAAAGGAATGTGTGAAGGCTTGGAATATGTGCTGAGATCCATGAAATCAGGTGGTAAGAGGAGAGTTATAATTCCTTCAAGTTTGGGGTTTGGAGAGAATGGTGCTGACTTAGGAACTGGGGTTCAAATTCCTCCATTTGCAACTTTAGAGTATGTAATTGAGATTGATAAGGTTTCCATTGCACCTGCTTGAACTGATCTTTGATGCACATAGCTAAACAATAGAACATATTTTGCTTCTCTTCTTCCTTGCATTTCTTTTTTTCTTTCCTTTTCAGGTGTTTGTTTCCCAGATGATTTTTTGTTCCTTTGCAGTTCATCAAAATATAGAGAAAGGAACACAACAGAAGGATCCTTTCATTAGCTTTCTATCTTTCCCCATGAACTCTGCAATATGGTTTGGAATAATATTAATACATTCTATTGTTTTCTGTTATTTTGTAATCTAAATATGGACTTTAAGTAATATTCAAGATATAAATGTGTTGAGTTATTTTTCTAGAAAAATAA ATGGCTTCTCTTTTCGGATCAACTTCATTTCTCTCCCACCCACTTACTAGAACTTATCACTTAGCTTCCTCACAAACCCCTTCACCTTCAACCCCACCTTCCCAACCGCCGCAAACTCCGCCGTCCCCATCTCCATCTCTGAGCGCTTCTTCATCGGAGCAACTTAAACCAGCCCCATCAAAGGTGGAACAACAGAGGTCTACCACCAATGTCGATTCTACGGATTGGATTGCTTCAACTTTGACAAGACGATTTGGGCTTGGCGCTGGCCTTGCGTGGGCTGCTTTTCTCGCCGTTGGTGTAGTCTCCGAACAAATCAAAACTCGCCTCGAAGTCTCTCAAGAAGAAGCTAATACAAGAAACGTTGAAAAGGAAGAGGAAGTGGTGCTACCCAATGGCATAAGGTATTATGAGCTGCGAGTAGGCGGCGGCGCCGTACCGAGGACGGGGGACTTGGTTGTGATTGATCTGAAGGGAAAAATACAAGGAACTGATGAAGTATTCGTAGATACATTTGGAAAGGAAAGAAAGCCACTGGCTTTGGTGATGGGCTCAAGACCTTACAGCAAAGGAATGTGTGAAGGCTTGGAATATGTGCTGAGATCCATGAAATCAGGTGGTAAGAGGAGAGTTATAATTCCTTCAAGTTTGGGGTTTGGAGAGAATGGTGCTGACTTAGGAACTGGGGTTCAAATTCCTCCATTTGCAACTTTAGAGTATGTAATTGAGATTGATAAGGTTTCCATTGCACCTGCTTGA MASLFGSTSFLSHPLTRTYHLASSQTPSPSTPPSQPPQTPPSPSPSLSASSSEQLKPAPSKVEQQRSTTNVDSTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRLEVSQEEANTRNVEKEEEVVLPNGIRYYELRVGGGAVPRTGDLVVIDLKGKIQGTDEVFVDTFGKERKPLALVMGSRPYSKGMCEGLEYVLRSMKSGGKRRVIIPSSLGFGENGADLGTGVQIPPFATLEYVIEIDKVSIAPA
BLAST of CsGy1G006980 vs. NCBI nr
Match: XP_004137497.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis sativus] >KGN64167.1 hypothetical protein Csa_1G042740 [Cucumis sativus]) HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-117 Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsGy1G006980 vs. NCBI nr
Match: XP_008464100.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115 Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsGy1G006980 vs. NCBI nr
Match: XP_022137092.1 (peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Momordica charantia]) HSP 1 Score: 389.8 bits (1000), Expect = 7.0e-105 Identity = 230/254 (90.55%), Postives = 241/254 (94.88%), Query Frame = 0
BLAST of CsGy1G006980 vs. NCBI nr
Match: XP_023001107.1 (peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102 Identity = 222/252 (88.10%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of CsGy1G006980 vs. NCBI nr
Match: XP_022923724.1 (peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucurbita moschata]) HSP 1 Score: 370.2 bits (949), Expect = 5.7e-99 Identity = 219/255 (85.88%), Postives = 234/255 (91.76%), Query Frame = 0
BLAST of CsGy1G006980 vs. TAIR10
Match: AT1G18170.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 290.4 bits (742), Expect = 1.0e-78 Identity = 139/186 (74.73%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of CsGy1G006980 vs. TAIR10
Match: AT1G73655.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 246.9 bits (629), Expect = 1.3e-65 Identity = 116/175 (66.29%), Postives = 147/175 (84.00%), Query Frame = 0
BLAST of CsGy1G006980 vs. TAIR10
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 0
BLAST of CsGy1G006980 vs. TAIR10
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-09 Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 0
BLAST of CsGy1G006980 vs. TAIR10
Match: AT4G26555.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-09 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of CsGy1G006980 vs. Swiss-Prot
Match: sp|Q9LDY5|FK172_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-2 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.9e-77 Identity = 139/186 (74.73%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of CsGy1G006980 vs. Swiss-Prot
Match: sp|Q8LB65|FK173_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP17-3 PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.4e-64 Identity = 116/175 (66.29%), Postives = 147/175 (84.00%), Query Frame = 0
BLAST of CsGy1G006980 vs. Swiss-Prot
Match: sp|Q9SR70|FK164_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.4e-11 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 0
BLAST of CsGy1G006980 vs. Swiss-Prot
Match: sp|Q54NB6|FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.9e-09 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of CsGy1G006980 vs. Swiss-Prot
Match: sp|Q9FLB3|FK153_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP15-3 OS=Arabidopsis thaliana OX=3702 GN=FKBP15-3 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.4e-08 Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 0
BLAST of CsGy1G006980 vs. TrEMBL
Match: tr|A0A0A0LTR8|A0A0A0LTR8_CUCSA (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_1G042740 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 1.1e-117 Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsGy1G006980 vs. TrEMBL
Match: tr|A0A1S3CM73|A0A1S3CM73_CUCME (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103502038 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 9.9e-116 Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsGy1G006980 vs. TrEMBL
Match: tr|A0A2K1Y919|A0A2K1Y919_POPTR (Peptidylprolyl isomerase OS=Populus trichocarpa OX=3694 GN=POPTR_012G048300v3 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 8.5e-91 Identity = 206/259 (79.54%), Postives = 229/259 (88.42%), Query Frame = 0
BLAST of CsGy1G006980 vs. TrEMBL
Match: tr|A0A2C9UMI0|A0A2C9UMI0_MANES (Peptidylprolyl isomerase OS=Manihot esculenta OX=3983 GN=MANES_14G170200 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.3e-88 Identity = 191/252 (75.79%), Postives = 221/252 (87.70%), Query Frame = 0
BLAST of CsGy1G006980 vs. TrEMBL
Match: tr|A0A1Q3C5P3|A0A1Q3C5P3_CEPFO (Peptidylprolyl isomerase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18882 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88 Identity = 192/260 (73.85%), Postives = 222/260 (85.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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