CmoCh18G000510 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G000510
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPeptidyl-prolyl cis-trans isomerase
LocationCmo_Chr18 : 333438 .. 335304 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGATAAGGTAGGGACTATCATCCAAATCTTATATTGTGTTGCATCTTTCTGCAGCTGTTCTGTCTGTTTGGATCATGGCTTCTCTATTCGGATCAACTGCACTTCTCTCCCACCCACTTACCAGAACTTATCACTTAGCTTCCTCACAGACGCCTCCACCTACTCAACCACAGCAAACTCCGCCGCCATCTCCATCTCTGAGCACTTCCTCATTAGAGCATCTAAAGCCAGCCCCATCAAAGGTGGAGCAGCAGAGGCCTGCCACTCATGTAGAAGCTACAGAATGGGGTGCTTCAACCTTGACAAGGCGATATGGGCTCAGCGCTGGCCTTGCCTGTGCTGCTTTTCTCGCCGTTGGTATAGTTTCCCAAGAAGAAGCAAATAAAAGGTACTCAACCCATTTCCCTTCTCAGCATGTTACTTCCTTATCATTACAAGTCCGTTTCCTGTTATGAATTGTTATGAGCATAAACCAGTTAAGTTGCTCTGGTGAATAAGAGAATGCCGTCCTGATATTGTTCTACTTCCCAGTGTTAGGAACCACAAACCTCTACAATGGTGTGATCTCGTCCACTTTGAGCCTAAACTCTCATGGTTTTGCTTTTGATTTCCTCGAAAAGCCTCGGAGATGTATTCCTTACTTGTAAATTCATGATAAACCCCTTAATTAGTCAACGTGGGACCTCTCTTCCAACAATCCTTAACAATCCTCCCCTCGAACAAAGTACGCCATAGAGCCTCCCCTAAAGCCTATGAGACTCTCAAACAGTCTCTCCATAGTCGAGGCTCGACTCATTCTCTGAAGCTCTCGAACAAAGTACACCCTTTGTTTGACACTTTAGTCACTTTTGACTACACCTTCGAGGCTCACAACTTATTTGTTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGGCATGACTCAGATAACATGTTAGGAAGCATGGCTCTCCATAATGATATGATATTTTCCCCTTTGAGCATAAGCTCTTGTGGCTTTGCTTTTGGTTTCTCCAAGAGGCCTCGTACCAATGGAGATGTATTCCTTATTTATAAACCATGATCAACCCTTCTAATTAACCGATATGGACTCCTCTCCGAACAATCCTCAACACGTAGAACATGAACGAATTCTCTTAAAATATGATTTGTTTTACCAATAACAAGATGCATTGCATTCTGCAGAAACGTTGAAAAGGAAGAGGAAGTAGTCCTACAAAATGGCATAAGGTGCACATCTAACATACATCTTAACTTGGCCACATTCCCCACTATCTGACTCTCTTAGTTCTATAAACTTTGATGATCCAAAACAGGTACTACGAGACGAGGGTCGGCCGTGGCACCGTACCGAGGTCCGGGGACCTCGTTGTGATTGATCTCAAAGGGAAAGTACAAGACAGTAATGACATATTTGTAGATACATTTGAGAATGAGAGGAAGGCATTGGCTATGGTGATGGGCTCAAGACCTTACTGCAAAGGAATGTGTGAAGGTTTGGAATATGTTGTGAGATCCATGAAACCAGGCGGTAGGAGGAGAGTTATAATTCCTTATGATTTGGGGTTTGGAGAAAAAGGTGCTGATTTAGGCACTGGCTTTCGAATTCCTCCATTTGCAACATTAGAGTATGTAGTTGAGATTGATGAGGCTTCCATTGCAGCTGCTTGAGCTGTTCTTGGATGCATATAGCTACACAGCACACCATTCTTTCCCCTTTTTCTGCCTTGTATTCATGGAAATATAGAGGACAACAGGGATCCTTTCATTTCATTATAGCAATGTTTGAAGATTCAAACCATCATTTGAAATCTAAATTCGACACCTAATGACTGCATCACCTGCAACATGACTGCA

mRNA sequence

AAATGGATAAGGTAGGGACTATCATCCAAATCTTATATTGTGTTGCATCTTTCTGCAGCTGTTCTGTCTGTTTGGATCATGGCTTCTCTATTCGGATCAACTGCACTTCTCTCCCACCCACTTACCAGAACTTATCACTTAGCTTCCTCACAGACGCCTCCACCTACTCAACCACAGCAAACTCCGCCGCCATCTCCATCTCTGAGCACTTCCTCATTAGAGCATCTAAAGCCAGCCCCATCAAAGGTGGAGCAGCAGAGGCCTGCCACTCATGTAGAAGCTACAGAATGGGGTGCTTCAACCTTGACAAGGCGATATGGGCTCAGCGCTGGCCTTGCCTGTGCTGCTTTTCTCGCCGTTGGTATAGTTTCCCAAGAAGAAGCAAATAAAAGAAACGTTGAAAAGGAAGAGGAAGTAGTCCTACAAAATGGCATAAGGTACTACGAGACGAGGGTCGGCCGTGGCACCGTACCGAGGTCCGGGGACCTCGTTGTGATTGATCTCAAAGGGAAAGTACAAGACAGTAATGACATATTTGTAGATACATTTGAGAATGAGAGGAAGGCATTGGCTATGGTGATGGGCTCAAGACCTTACTGCAAAGGAATGTGTGAAGGTTTGGAATATGTTGTGAGATCCATGAAACCAGGCGGTAGGAGGAGAGTTATAATTCCTTATGATTTGGGGTTTGGAGAAAAAGGTGCTGATTTAGGCACTGGCTTTCGAATTCCTCCATTTGCAACATTAGAGTATGTAGTTGAGATTGATGAGGCTTCCATTGCAGCTGCTTGAGCTGTTCTTGGATGCATATAGCTACACAGCACACCATTCTTTCCCCTTTTTCTGCCTTGTATTCATGGAAATATAGAGGACAACAGGGATCCTTTCATTTCATTATAGCAATGTTTGAAGATTCAAACCATCATTTGAAATCTAAATTCGACACCTAATGACTGCATCACCTGCAACATGACTGCA

Coding sequence (CDS)

ATGGCTTCTCTATTCGGATCAACTGCACTTCTCTCCCACCCACTTACCAGAACTTATCACTTAGCTTCCTCACAGACGCCTCCACCTACTCAACCACAGCAAACTCCGCCGCCATCTCCATCTCTGAGCACTTCCTCATTAGAGCATCTAAAGCCAGCCCCATCAAAGGTGGAGCAGCAGAGGCCTGCCACTCATGTAGAAGCTACAGAATGGGGTGCTTCAACCTTGACAAGGCGATATGGGCTCAGCGCTGGCCTTGCCTGTGCTGCTTTTCTCGCCGTTGGTATAGTTTCCCAAGAAGAAGCAAATAAAAGAAACGTTGAAAAGGAAGAGGAAGTAGTCCTACAAAATGGCATAAGGTACTACGAGACGAGGGTCGGCCGTGGCACCGTACCGAGGTCCGGGGACCTCGTTGTGATTGATCTCAAAGGGAAAGTACAAGACAGTAATGACATATTTGTAGATACATTTGAGAATGAGAGGAAGGCATTGGCTATGGTGATGGGCTCAAGACCTTACTGCAAAGGAATGTGTGAAGGTTTGGAATATGTTGTGAGATCCATGAAACCAGGCGGTAGGAGGAGAGTTATAATTCCTTATGATTTGGGGTTTGGAGAAAAAGGTGCTGATTTAGGCACTGGCTTTCGAATTCCTCCATTTGCAACATTAGAGTATGTAGTTGAGATTGATGAGGCTTCCATTGCAGCTGCTTGA
Homology
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BLAST of CmoCh18G000510 vs. Swiss-Prot
Match: FK172_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-2 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-60
Identity = 136/258 (52.71%), Postives = 172/258 (66.67%), Query Frame = 1 

Query: 1   MASLFGSTA---LLSHPLTRT--YH--LASSQTPPPTQPQQTPPPSPSLSTSSLEHLKPA 60
           MA+LF +TA    LS P T+T  YH   ASS  PP  +    PPP P           P 
Sbjct: 1   MANLFTATAPFLSLSKPFTKTASYHQCYASSSNPPEPESSSPPPPPP-----------PP 60

Query: 61  PSKVEQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGI----------VSQEEAN 120
                QQ+   +VE T+W AS+LTRR+G+ AGLA A FLA G+          VSQE AN
Sbjct: 61  QPLASQQKRKKNVETTDWVASSLTRRFGIGAGLAWAGFLAFGVISEQIKTRIEVSQEVAN 120

Query: 121 KRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTF----EN 180
            R+VE+E+E+VL NGIRYY+ RVG G  PR+GDLVVIDLKG+VQ +  +FVDTF    + 
Sbjct: 121 TRDVEEEKEIVLPNGIRYYDQRVGGGATPRAGDLVVIDLKGQVQGTGQVFVDTFGTKDKK 180

Query: 181 ERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPP 238
           + K LA+V+GS+PY KG+CEG++YV+RSMK GG+RRVI+P  LGFG  GA+L +G +IPP
Sbjct: 181 KMKPLALVVGSKPYSKGLCEGIDYVLRSMKAGGKRRVIVPPSLGFGVDGAELESGLQIPP 240

[Close]
BLAST of CmoCh18G000510 vs. Swiss-Prot
Match: FK173_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-3 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.8e-48
Identity = 108/241 (44.81%), Postives = 148/241 (61.41%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTPPPTQPQQTPPPSPSLSTSSLEHLKPAPSKVEQQ 60
           MA+LF +T    H               P+Q  +    S SLS +  E+ +P      Q+
Sbjct: 1   MATLFTATVPSHHRFVS-----------PSQHPKQSLLSQSLSVTFTENPQPTAVVTLQE 60

Query: 61  RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS-----------QEEANKRNVEK 120
           +     + T+W  S +TRR+G+ AG   A FLA G+VS           QEE N R +EK
Sbjct: 61  Q-----QLTDWITSPVTRRFGIGAGFTWAGFLAFGVVSEQMKKSRLDVFQEEDNTRGLEK 120

Query: 121 EEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVMG 180
           +EE++L NGIRYY+ +VG G  P SG LVV D+KG+V  +  +FVDTF  + K+LAMVM 
Sbjct: 121 QEEIILPNGIRYYDLQVGSGATPSSGYLVVFDVKGQVHGTEQVFVDTFGGKGKSLAMVMD 180

Query: 181 SRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVVEI 231
           SRPY KG+C+G+E+V+RSMK GG+RRVIIP  LGFG++  + G G  IPP ATL+Y++E+
Sbjct: 181 SRPYSKGLCQGIEHVLRSMKAGGKRRVIIPPSLGFGDRNVEFGQGLEIPPSATLDYIIEV 225

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BLAST of CmoCh18G000510 vs. Swiss-Prot
Match: FK164_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 69/237 (29.11%), Postives = 99/237 (41.77%), Query Frame = 1 

Query: 8   TALLSHPLTRTYHLASSQTPPPTQPQQTPPPSPSLSTSSLEH-------LKPAPSKVEQQ 67
           T  L HPL   +H  SS  P P++ +Q+ P   SL +   E        L PAP   E +
Sbjct: 4   TMKLVHPL---HHSLSSSIPFPSRKRQSKPYRCSLPSPGCEKVIRTETVLPPAPVSCEGR 63

Query: 68  RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVSQEEANKRNVEKEEEVVLQNGIR 127
           R          G    T    LS G A A        S+       + + +   L NG++
Sbjct: 64  RVLL-------GCLLATASGILSTGSAEAVS-----TSRRALRASKLPESDFTTLPNGLK 123

Query: 128 YYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVMGSRPYC------ 187
           YY+ +VG G     G  V +    K +        TF   R+ L  V G  PY       
Sbjct: 124 YYDIKVGNGAEAVKGSRVAVHYVAKWKGI------TFMTSRQGLG-VGGGTPYGFDVGQS 183

Query: 188 --KGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVVEI 230
               + +GL+  V  M+ GG+R VI+P +L +G+KG        IPP AT+E  +E+
Sbjct: 184 ERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQ-----EIPPNATIELDIEL 213

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BLAST of CmoCh18G000510 vs. Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 36/131 (27.48%), Postives = 70/131 (53.44%), Query Frame = 1 

Query: 101 EANKRN--VEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFE 160
           EA K    VEK+E+  +  G+   + +VG G V ++G +V++  +G+++ +N +F +  +
Sbjct: 288 EAKKEEAPVEKKEKKQIAGGVSIEDLKVGSGPVAKAGKVVMVYYEGRLKQNNKMFDNCVK 347

Query: 161 NERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIP 220
                    +GS    K +  G +  +  MK GG+R+++ P  + +G KG+       IP
Sbjct: 348 G--PGFKFRLGS----KEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPP----VIP 407

Query: 221 PFATLEYVVEI 230
           P +TL + V++
Sbjct: 408 PNSTLVFEVDL 408

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BLAST of CmoCh18G000510 vs. TrEMBL
Match: A0A0A0LTR8_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_1G042740 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.9e-94
Identity = 189/252 (75.00%), Postives = 210/252 (83.33%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTP----PPTQPQQTPP-PSPSLSTSSLEHLKPAPS 60
           MASLFGST+ LSHPLTRTYHLASSQTP    PP+QP QTPP PSPSLS SS E LKPAPS
Sbjct: 1   MASLFGSTSFLSHPLTRTYHLASSQTPSPSTPPSQPPQTPPSPSPSLSASSSEQLKPAPS 60

Query: 61  KVEQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------QEEANKR 120
           KVEQQR  T+V++T+W ASTLTRR+GL AGLA AAFLAVG+VS          QEEAN R
Sbjct: 61  KVEQQRSTTNVDSTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRLEVSQEEANTR 120

Query: 121 NVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALA 180
           NVEKEEEVVL NGIRYYE RVG G VPR+GDLVVIDLKGK+Q ++++FVDTF  ERK LA
Sbjct: 121 NVEKEEEVVLPNGIRYYELRVGGGAVPRTGDLVVIDLKGKIQGTDEVFVDTFGKERKPLA 180

Query: 181 MVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEY 238
           +VMGSRPY KGMCEGLEYV+RSMK GG++RVIIP  LGFGE GADLGTG +IPPFATLEY
Sbjct: 181 LVMGSRPYSKGMCEGLEYVLRSMKSGGKKRVIIPSSLGFGENGADLGTGVQIPPFATLEY 240

[Close]
BLAST of CmoCh18G000510 vs. TrEMBL
Match: B9I2F8_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0012s04560g PE=4 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 163/258 (63.18%), Postives = 191/258 (74.03%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTPPPTQPQ---QTPPPSPSLSTSSLEH-LKPAPSK 60
           MA+ FGS   LSHPLTRT   +SSQTPPP  P      P PSP LS+SS E  L PA  +
Sbjct: 1   MATFFGSPPFLSHPLTRTNFSSSSQTPPPPTPPIPPSQPNPSPQLSSSSSEQPLLPASVR 60

Query: 61  VEQQRPA-------THVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------Q 120
           V+QQ+PA       T VE T+W ASTLTRR+GL AGLA AAFLAVG+VS          Q
Sbjct: 61  VQQQKPAKPAGNSATKVETTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRIEVSQ 120

Query: 121 EEANKRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFEN 180
           +EAN RNV KEEEV L NGIRYYE RVG G  P++GDLVVIDLKGK++ S ++FVDTF  
Sbjct: 121 QEANTRNVGKEEEVALPNGIRYYELRVGGGASPKTGDLVVIDLKGKIEGSGEVFVDTFGG 180

Query: 181 ERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPP 238
           +RK LA+VMGSRPY KGMCEG+EYV+RS+K GG+RRVI+P +LGF E GADLGTG +IPP
Sbjct: 181 DRKPLALVMGSRPYSKGMCEGVEYVLRSVKAGGKRRVIVPPNLGFRENGADLGTGVQIPP 240

[Close]
BLAST of CmoCh18G000510 vs. TrEMBL
Match: A0A0D2PFB1_GOSRA (Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G202900 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.7e-76
Identity = 153/249 (61.45%), Postives = 189/249 (75.90%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASS-QTPPPTQPQQTPPPSPSLSTSSLEHLKPAPSKVEQ 60
           MA+ F S   LS+PLTRT   +SS QTPPP      PPPSP L+T+S E   P   +  +
Sbjct: 1   MATSFSSPPFLSYPLTRTPRFSSSSQTPPPNSQPPNPPPSPKLTTTSSEQQPPVTVREPK 60

Query: 61  Q-RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGI----------VSQEEANKRNVE 120
             +P T VE T+W AS+LTRR+GL AGLA AAFLAVG+          VS++EAN R+VE
Sbjct: 61  PPKPTTTVETTDWIASSLTRRFGLGAGLAWAAFLAVGVISEQIKTRIEVSEQEANTRDVE 120

Query: 121 KEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVM 180
           K+EEVVL NGIRYYE R+G G  PR+GDLVV+DLKGK++   ++FVDTF+ ++K LA+VM
Sbjct: 121 KQEEVVLPNGIRYYELRIGGGASPRNGDLVVLDLKGKIESRGEVFVDTFDGDKKPLALVM 180

Query: 181 GSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVVE 238
           GSRPY KGMCEG+EY+VRSMK GG+RRVI+P +LGFGEKGADLGTG +IPPFATLEY+VE
Sbjct: 181 GSRPYTKGMCEGIEYIVRSMKAGGKRRVIVPPNLGFGEKGADLGTGVQIPPFATLEYIVE 240

[Close]
BLAST of CmoCh18G000510 vs. TrEMBL
Match: A0A061FUU2_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_012717 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.5e-75
Identity = 158/261 (60.54%), Postives = 193/261 (73.95%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASS-QTPPPTQPQQTPP----------PSPSLSTSSLEH 60
           MA+ FGS   LSHPLTRT H +SS QTPPPT P    P          PSP LST+S E 
Sbjct: 1   MAAFFGSPPFLSHPLTRTPHFSSSSQTPPPTPPSPPNPSSQSQPQPSTPSPQLSTTSSEQ 60

Query: 61  LKPAPSKVEQQ---RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS-------- 120
             PA  +V+QQ   +PAT+VE T+W AS+LTRR+GL AGLA AAFLAVG++S        
Sbjct: 61  QPPATVRVQQQGPPKPATNVETTDWIASSLTRRFGLGAGLAWAAFLAVGVISEQIKTRLE 120

Query: 121 --QEEANKRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDT 180
             Q+EAN R+ E++EEVVL NGIRYYE RVG G  PR+GDLVVIDLKGK++ S ++FVDT
Sbjct: 121 ISQQEANTRDAEEQEEVVLPNGIRYYEVRVGGGASPRNGDLVVIDLKGKIEGSGEVFVDT 180

Query: 181 FENERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFR 238
           F+  +K LA+VMGSRPY KG CEG+E V+RSMK GG+RRVI+P +LGFGE GADLG+G +
Sbjct: 181 FDGGKKPLALVMGSRPYSKGTCEGVESVLRSMKAGGKRRVIVPPNLGFGENGADLGSGVQ 240

[Close]
BLAST of CmoCh18G000510 vs. TrEMBL
Match: W9RFH9_9ROSA (Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_017385 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.5e-75
Identity = 160/265 (60.38%), Postives = 190/265 (71.70%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQT----PPPTQPQQTPPPSPS-------LSTSSLEH 60
           MAS FGS   LSHPLTRT+HL+SS      PPP  P Q PP  P        LS +S E 
Sbjct: 1   MASFFGSPPFLSHPLTRTHHLSSSSQTRPPPPPLPPSQKPPSQPQTPQPGQQLSATSSEQ 60

Query: 61  LKPAPSKVEQQRPA-------THVEATEWGASTLTRRYGLSAGLACAAFLAVGI------ 120
             P  +KV QQ+ A       T VE+T+W ASTLTRR+GL AGLA   FLA G+      
Sbjct: 61  PTPVSAKVMQQQKASKPASSTTKVESTDWIASTLTRRFGLGAGLAWVGFLAFGVISEQIK 120

Query: 121 ----VSQEEANKRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDI 180
               VSQ+EAN RNVEKEEEVVL NGIRYYE +VG G  PR GDLVVIDL+GKV+ S ++
Sbjct: 121 TRLEVSQQEANTRNVEKEEEVVLPNGIRYYELKVGGGASPRPGDLVVIDLQGKVEGSGEV 180

Query: 181 FVDTFENERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLG 238
           FVDTFE E+K LA+VMGSRPY KG+CEG+EYV++S+K GG+RRVI+P +LGFGE GADLG
Sbjct: 181 FVDTFEKEQKPLALVMGSRPYSKGVCEGIEYVLKSIKAGGKRRVIVPPNLGFGENGADLG 240

[Close]
BLAST of CmoCh18G000510 vs. TAIR10
Match: AT1G18170.1 (AT1G18170.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 234.2 bits (596), Expect = 8.4e-62
Identity = 136/258 (52.71%), Postives = 172/258 (66.67%), Query Frame = 1 

Query: 1   MASLFGSTA---LLSHPLTRT--YH--LASSQTPPPTQPQQTPPPSPSLSTSSLEHLKPA 60
           MA+LF +TA    LS P T+T  YH   ASS  PP  +    PPP P           P 
Sbjct: 1   MANLFTATAPFLSLSKPFTKTASYHQCYASSSNPPEPESSSPPPPPP-----------PP 60

Query: 61  PSKVEQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGI----------VSQEEAN 120
                QQ+   +VE T+W AS+LTRR+G+ AGLA A FLA G+          VSQE AN
Sbjct: 61  QPLASQQKRKKNVETTDWVASSLTRRFGIGAGLAWAGFLAFGVISEQIKTRIEVSQEVAN 120

Query: 121 KRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTF----EN 180
            R+VE+E+E+VL NGIRYY+ RVG G  PR+GDLVVIDLKG+VQ +  +FVDTF    + 
Sbjct: 121 TRDVEEEKEIVLPNGIRYYDQRVGGGATPRAGDLVVIDLKGQVQGTGQVFVDTFGTKDKK 180

Query: 181 ERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPP 238
           + K LA+V+GS+PY KG+CEG++YV+RSMK GG+RRVI+P  LGFG  GA+L +G +IPP
Sbjct: 181 KMKPLALVVGSKPYSKGLCEGIDYVLRSMKAGGKRRVIVPPSLGFGVDGAELESGLQIPP 240

[Close]
BLAST of CmoCh18G000510 vs. TAIR10
Match: AT1G73655.1 (AT1G73655.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 108/241 (44.81%), Postives = 148/241 (61.41%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTPPPTQPQQTPPPSPSLSTSSLEHLKPAPSKVEQQ 60
           MA+LF +T    H               P+Q  +    S SLS +  E+ +P      Q+
Sbjct: 1   MATLFTATVPSHHRFVS-----------PSQHPKQSLLSQSLSVTFTENPQPTAVVTLQE 60

Query: 61  RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS-----------QEEANKRNVEK 120
           +     + T+W  S +TRR+G+ AG   A FLA G+VS           QEE N R +EK
Sbjct: 61  Q-----QLTDWITSPVTRRFGIGAGFTWAGFLAFGVVSEQMKKSRLDVFQEEDNTRGLEK 120

Query: 121 EEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVMG 180
           +EE++L NGIRYY+ +VG G  P SG LVV D+KG+V  +  +FVDTF  + K+LAMVM 
Sbjct: 121 QEEIILPNGIRYYDLQVGSGATPSSGYLVVFDVKGQVHGTEQVFVDTFGGKGKSLAMVMD 180

Query: 181 SRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVVEI 231
           SRPY KG+C+G+E+V+RSMK GG+RRVIIP  LGFG++  + G G  IPP ATL+Y++E+
Sbjct: 181 SRPYSKGLCQGIEHVLRSMKAGGKRRVIIPPSLGFGDRNVEFGQGLEIPPSATLDYIIEV 225

[Close]
BLAST of CmoCh18G000510 vs. TAIR10
Match: AT3G10060.1 (AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-10
Identity = 69/237 (29.11%), Postives = 99/237 (41.77%), Query Frame = 1 

Query: 8   TALLSHPLTRTYHLASSQTPPPTQPQQTPPPSPSLSTSSLEH-------LKPAPSKVEQQ 67
           T  L HPL   +H  SS  P P++ +Q+ P   SL +   E        L PAP   E +
Sbjct: 4   TMKLVHPL---HHSLSSSIPFPSRKRQSKPYRCSLPSPGCEKVIRTETVLPPAPVSCEGR 63

Query: 68  RPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVSQEEANKRNVEKEEEVVLQNGIR 127
           R          G    T    LS G A A        S+       + + +   L NG++
Sbjct: 64  RVLL-------GCLLATASGILSTGSAEAVS-----TSRRALRASKLPESDFTTLPNGLK 123

Query: 128 YYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVMGSRPYC------ 187
           YY+ +VG G     G  V +    K +        TF   R+ L  V G  PY       
Sbjct: 124 YYDIKVGNGAEAVKGSRVAVHYVAKWKGI------TFMTSRQGLG-VGGGTPYGFDVGQS 183

Query: 188 --KGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVVEI 230
               + +GL+  V  M+ GG+R VI+P +L +G+KG        IPP AT+E  +E+
Sbjct: 184 ERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQ-----EIPPNATIELDIEL 213

[Close]
BLAST of CmoCh18G000510 vs. TAIR10
Match: AT4G26555.1 (AT4G26555.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.7e-07
Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 1 

Query: 109 KEEEVV----LQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFV----DTFENE 168
           KE EV+    L +G+RY E   G G     GDLV  +L    + +N  FV    D F  E
Sbjct: 74  KEPEVIRTLKLPSGVRYQEIIEGEGREAHEGDLV--ELNYVCRRANGYFVHSTVDQFSGE 133

Query: 169 RKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGF 205
              + +++        + EGL+ V+  MK GG+RR +IP  +G+
Sbjct: 134 SSPVKLILDEND----VIEGLKEVLVGMKAGGKRRALIPPSVGY 171

[Close]
BLAST of CmoCh18G000510 vs. TAIR10
Match: AT3G60370.1 (AT3G60370.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 48.9 bits (115), Expect = 5.0e-06
Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 1 

Query: 117 NGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMVMGSRPYCKG 176
           +G+ Y +  VG+G  P+ G  V     G  +    I  D+   +     + MG+      
Sbjct: 120 SGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGRRI--DSTYIQGSPARIRMGTN----A 179

Query: 177 MCEGLEYVVRSMKPGGRRRVIIPYDLG 204
           +  G E  +R MKPGGRRR+IIP +LG
Sbjct: 180 LVPGFEMGIRDMKPGGRRRIIIPPELG 200

[Close]
BLAST of CmoCh18G000510 vs. NCBI nr
Match: gi|659066846|ref|XP_008464100.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 6.4e-96
Identity = 194/252 (76.98%), Postives = 211/252 (83.73%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTP----PPTQPQQTPP-PSPSLSTSSLEHLKPAPS 60
           MASLFGST+ LSHPLTRTYHLASSQTP    PP+QP QTPP PSPSLSTSS + LKPAPS
Sbjct: 1   MASLFGSTSFLSHPLTRTYHLASSQTPSPSTPPSQPPQTPPSPSPSLSTSSADQLKPAPS 60

Query: 61  KVEQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------QEEANKR 120
           KVEQQR  T+V++T+W ASTLTRR+GL AGLA AAFLAVG+VS          QE AN R
Sbjct: 61  KVEQQRSTTNVDSTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRLEVSQEVANTR 120

Query: 121 NVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALA 180
           NVEKEEEVVL NGIRYYE RVG G VPR+GDLVVIDLKGKVQ S+++FVDTF  ERK LA
Sbjct: 121 NVEKEEEVVLPNGIRYYELRVGGGAVPRTGDLVVIDLKGKVQGSDEVFVDTFGKERKPLA 180

Query: 181 MVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEY 238
           MVMGSRPY KGMCEGLEYV+RSMK GG+RRVIIP  LGFGE GADLGTGF+IPPFATLEY
Sbjct: 181 MVMGSRPYSKGMCEGLEYVLRSMKSGGKRRVIIPSSLGFGENGADLGTGFQIPPFATLEY 240

[Close]
BLAST of CmoCh18G000510 vs. NCBI nr
Match: gi|449439447|ref|XP_004137497.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 2.7e-94
Identity = 189/252 (75.00%), Postives = 210/252 (83.33%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTP----PPTQPQQTPP-PSPSLSTSSLEHLKPAPS 60
           MASLFGST+ LSHPLTRTYHLASSQTP    PP+QP QTPP PSPSLS SS E LKPAPS
Sbjct: 1   MASLFGSTSFLSHPLTRTYHLASSQTPSPSTPPSQPPQTPPSPSPSLSASSSEQLKPAPS 60

Query: 61  KVEQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------QEEANKR 120
           KVEQQR  T+V++T+W ASTLTRR+GL AGLA AAFLAVG+VS          QEEAN R
Sbjct: 61  KVEQQRSTTNVDSTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRLEVSQEEANTR 120

Query: 121 NVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALA 180
           NVEKEEEVVL NGIRYYE RVG G VPR+GDLVVIDLKGK+Q ++++FVDTF  ERK LA
Sbjct: 121 NVEKEEEVVLPNGIRYYELRVGGGAVPRTGDLVVIDLKGKIQGTDEVFVDTFGKERKPLA 180

Query: 181 MVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEY 238
           +VMGSRPY KGMCEGLEYV+RSMK GG++RVIIP  LGFGE GADLGTG +IPPFATLEY
Sbjct: 181 LVMGSRPYSKGMCEGLEYVLRSMKSGGKKRVIIPSSLGFGENGADLGTGVQIPPFATLEY 240

[Close]
BLAST of CmoCh18G000510 vs. NCBI nr
Match: gi|802573709|ref|XP_012068446.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Jatropha curcas])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 155/250 (62.00%), Postives = 191/250 (76.40%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASS---QTPPPTQPQQTPPPSPSLSTSSLEHLKPAPSKV 60
           MA+LFGS   LSHPLTRT H++SS   QTPPP+QP Q    SP LST+  E   P P KV
Sbjct: 1   MAALFGSPPFLSHPLTRTAHISSSSSSQTPPPSQPPQPQSQSPQLSTNLSEQPTPIPVKV 60

Query: 61  EQQRPATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------QEEANKRNV 120
           +QQ+P T VE T+W AS LTRR+GL AGLA A FLA G+VS          Q+EAN R+V
Sbjct: 61  QQQKPTTKVETTDWIASNLTRRFGLGAGLAWAGFLAFGVVSEQIKTRLEVSQQEANTRDV 120

Query: 121 EKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFENERKALAMV 180
           EKEEEV+L NG+RY+E RVG G  PR GDLVVIDLKGK+++S  +FVDTF  ++K LA+V
Sbjct: 121 EKEEEVLLPNGVRYFELRVGGGASPRPGDLVVIDLKGKIEESGQVFVDTF-GDKKPLALV 180

Query: 181 MGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPPFATLEYVV 238
           MGSRPY KG+CEG+E+V++SMK GG+R+VI+P +LGFGE GADLG+  +IPPFATLEY+V
Sbjct: 181 MGSRPYSKGICEGIEFVLKSMKAGGKRKVIVPSNLGFGENGADLGSDVQIPPFATLEYIV 240

[Close]
BLAST of CmoCh18G000510 vs. NCBI nr
Match: gi|566196793|ref|XP_002318521.2| (immunophilin family protein [Populus trichocarpa])

HSP 1 Score: 294.3 bits (752), Expect = 1.9e-76
Identity = 163/258 (63.18%), Postives = 191/258 (74.03%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTPPPTQPQ---QTPPPSPSLSTSSLEH-LKPAPSK 60
           MA+ FGS   LSHPLTRT   +SSQTPPP  P      P PSP LS+SS E  L PA  +
Sbjct: 1   MATFFGSPPFLSHPLTRTNFSSSSQTPPPPTPPIPPSQPNPSPQLSSSSSEQPLLPASVR 60

Query: 61  VEQQRPA-------THVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------Q 120
           V+QQ+PA       T VE T+W ASTLTRR+GL AGLA AAFLAVG+VS          Q
Sbjct: 61  VQQQKPAKPAGNSATKVETTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRIEVSQ 120

Query: 121 EEANKRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFEN 180
           +EAN RNV KEEEV L NGIRYYE RVG G  P++GDLVVIDLKGK++ S ++FVDTF  
Sbjct: 121 QEANTRNVGKEEEVALPNGIRYYELRVGGGASPKTGDLVVIDLKGKIEGSGEVFVDTFGG 180

Query: 181 ERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPP 238
           +RK LA+VMGSRPY KGMCEG+EYV+RS+K GG+RRVI+P +LGF E GADLGTG +IPP
Sbjct: 181 DRKPLALVMGSRPYSKGMCEGVEYVLRSVKAGGKRRVIVPPNLGFRENGADLGTGVQIPP 240

[Close]
BLAST of CmoCh18G000510 vs. NCBI nr
Match: gi|743890692|ref|XP_011039123.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like isoform X1 [Populus euphratica])

HSP 1 Score: 294.3 bits (752), Expect = 1.9e-76
Identity = 163/258 (63.18%), Postives = 191/258 (74.03%), Query Frame = 1 

Query: 1   MASLFGSTALLSHPLTRTYHLASSQTPPPTQPQ---QTPPPSPSLSTSSLEHLK-PAPSK 60
           MA+ FGS   LSHPLTRT   +SSQTPPP  P      P PSP LS+SS E  + PA  +
Sbjct: 1   MATFFGSPPFLSHPLTRTNFSSSSQTPPPPTPPIPPSQPNPSPQLSSSSSEQPQLPASVR 60

Query: 61  VEQQRP-------ATHVEATEWGASTLTRRYGLSAGLACAAFLAVGIVS----------Q 120
           V+QQ+P       AT VE T+W ASTLTRR+GL AGLA AAFLAVG+VS          Q
Sbjct: 61  VQQQKPPKPAGNSATKVETTDWIASTLTRRFGLGAGLAWAAFLAVGVVSEQIKTRIEVSQ 120

Query: 121 EEANKRNVEKEEEVVLQNGIRYYETRVGRGTVPRSGDLVVIDLKGKVQDSNDIFVDTFEN 180
           +EAN RNV+K+EEV L NGIRYYE RVG G  P+ GDLVVIDLKGK++ S ++FVDTF  
Sbjct: 121 QEANTRNVDKQEEVALPNGIRYYELRVGGGASPKPGDLVVIDLKGKIEGSGEVFVDTFGG 180

Query: 181 ERKALAMVMGSRPYCKGMCEGLEYVVRSMKPGGRRRVIIPYDLGFGEKGADLGTGFRIPP 238
           +RK LA+VMGSRPY KGMCEG+EYV+RSMK GG+RRVI+P +LGF E GADLGTG +IPP
Sbjct: 181 DRKPLALVMGSRPYSKGMCEGVEYVLRSMKAGGKRRVIVPPNLGFRENGADLGTGVQIPP 240

The following BLAST results are available for this feature:
BLAST of CmoCh18G000510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FK172_ARATH1.5e-6052.71Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thali... [more]
FK173_ARATH3.8e-4844.81Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thali... [more]
FK164_ARATH1.0e-0829.11Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thali... [more]
FKBP4_SPOFR1.5e-0727.4846 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=... [more]
BLAST of CmoCh18G000510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTR8_CUCSA1.9e-9475.00Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_1G042740 PE=4 SV=1[more]
B9I2F8_POPTR1.3e-7663.18Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0012s04560g ... [more]
A0A0D2PFB1_GOSRA6.7e-7661.45Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G202900 PE... [more]
A0A061FUU2_THECC2.5e-7560.54Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_012717 PE=4 SV=1[more]
W9RFH9_9ROSA2.5e-7560.38Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_017385 PE=4 SV=1[more]
BLAST of CmoCh18G000510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18170.18.4e-6252.71 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT1G73655.12.1e-4944.81 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT3G10060.15.7e-1029.11 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT4G26555.17.7e-0733.65 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT3G60370.15.0e-0633.33 FKBP-like peptidyl-prolyl cis-trans isomerase family protein[more]
BLAST of CmoCh18G000510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066846|ref|XP_008464100.1|6.4e-9676.98PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis ... [more]
gi|449439447|ref|XP_004137497.1|2.7e-9475.00PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Cucumis ... [more]
gi|802573709|ref|XP_012068446.1|1.1e-7662.00PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Jatropha... [more]
gi|566196793|ref|XP_002318521.2|1.9e-7663.18immunophilin family protein [Populus trichocarpa][more]
gi|743890692|ref|XP_011039123.1|1.9e-7663.18PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like isof... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G000510.1CmoCh18G000510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 130..229
score: 3.6
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50059FKBP_PPIASEcoord: 135..233
score: 17
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 11..235
score: 1.8
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 99..229
score: 4.7
NoneNo IPR availablePANTHERPTHR10516:SF308PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATEDcoord: 11..235
score: 1.8
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 95..229
score: 7.69

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G000510Cucsa.121870Cucumber (Gy14) v1cgycmoB0315
CmoCh18G000510CmaCh18G000680Cucurbita maxima (Rimu)cmacmoB408
CmoCh18G000510Cla018461Watermelon (97103) v1cmowmB389
CmoCh18G000510Csa1G042740Cucumber (Chinese Long) v2cmocuB380
CmoCh18G000510MELO3C002126Melon (DHL92) v3.5.1cmomeB356
CmoCh18G000510ClCG04G010700Watermelon (Charleston Gray)cmowcgB357
CmoCh18G000510CSPI01G07140Wild cucumber (PI 183967)cmocpiB383
CmoCh18G000510Lsi02G002270Bottle gourd (USVL1VR-Ls)cmolsiB356
CmoCh18G000510Cp4.1LG09g11200Cucurbita pepo (Zucchini)cmocpeB377
CmoCh18G000510Cp4.1LG20g01390Cucurbita pepo (Zucchini)cmocpeB404
CmoCh18G000510MELO3C002126.2Melon (DHL92) v3.6.1cmomedB408
CmoCh18G000510CsaV3_1G007080Cucumber (Chinese Long) v3cmocucB0457
CmoCh18G000510Bhi08G001070Wax gourdcmowgoB0516
CmoCh18G000510CsGy1G006980Cucumber (Gy14) v2cgybcmoB082
CmoCh18G000510Carg04842Silver-seed gourdcarcmoB0527
CmoCh18G000510Carg06624Silver-seed gourdcarcmoB0673
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G000510Cucurbita maxima (Rimu)cmacmoB224
CmoCh18G000510Cucurbita pepo (Zucchini)cmocpeB391
CmoCh18G000510Cucurbita pepo (Zucchini)cmocpeB413
CmoCh18G000510Bottle gourd (USVL1VR-Ls)cmolsiB377
CmoCh18G000510Cucumber (Gy14) v2cgybcmoB086
CmoCh18G000510Silver-seed gourdcarcmoB0812
CmoCh18G000510Watermelon (97103) v2cmowmbB402
CmoCh18G000510Wax gourdcmowgoB0546
CmoCh18G000510Cucurbita moschata (Rifu)cmocmoB064
CmoCh18G000510Cucurbita moschata (Rifu)cmocmoB171