CsGy1G002450 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G002450
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat
LocationChr1 : 1508965 .. 1510485 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAAACAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGGTGGGTTCATTCCCATGTCAACAGTAACGATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTAGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

mRNA sequence

ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAAACAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGGTGGGTTCATTCCCATGTCAACAGTAACGATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTAGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

Coding sequence (CDS)

ATGATCCTTATCAACAGGAGAAAATTGAACTTGGCACTCTCTCTGTGTTCCCATGTTAAGATCAATTTTTCAAATTTTCAGTTGCTTGTTCCCAGGTTCATTTGGAGTTCGGGTTTGAAAACAGCCACTGATACAATACCCAACGGCGGCTATTTTGCTAAGGAGCAAAAGTTCATGTTTCTTTTCAAGCAATGTTCCACTTTGAAAGATTTGAATCAACTCCATGCCAGTATTATTCGATTGGGTTTCGATCAGAATCTCTTTGTTATTGGCAAACTCATTGATTTTTGTGCGGTTTCGGATCATGGAGACATGAATTACGCTGTTGTTGTTTTTGACAGAATCGAAAACGCAGATGGGTTTCTTTGGAATACAATGATCAGGGGATTTGGAAGAAATCGTAAACTGCTAATGGCGTTTGAGTTCTACAAGAGGATGTTAGAGAAGGGAATAGCGGCGGATAATTTCACTTTTTCTTTCTTGCTGAAGATGACTGGGCAGTTGGGTTCAATTATGTTGGGGAAACAGTTGCATGTTAATATTCTGAAACTTGGCCTTGATTCTCATGTGTATGTGAGGAACACGCTTATACATATGTATGGCAGGTTAAAAGACGTCAATATAGCACGCAACCTGTTTGATGAATTGCCCAAAACAGATTTAGTGGCTTGGAATGCCGTAATTGACTGTCATGTCTCTTGTGGAATGTACAACGAAGCACTTGACTTGTTTGTTCAAATGTTGCAGAGTGGCGTCGAGCCAGACGAAGCCACACTGGTTGTGACGATTTCAGCATGTTCTGCATTGGGTGCACTGGACTGTGGGAGGTGGGTTCATTCCCATGTCAACAGTAACGATAGGGGAAAAACTATAGCTGTTTTCAATTCATTGATCGACATGTACGCCAAATGTGGAGCGGTTGAATACGCCCGCGAGATGTTTAACGCAGTGAGCGGCAAGAACATAGTAACGTGGAACACAATGATCATGGGATTAGCAACACATGGTGATGCAGAGGATGCACTGACACTCTTCTCAAACATGTTAGCCGAGAGGGTGGAGACTCCTGATGGTGTTACTTTCTTGGCAGTATTGTGTGCTTGTAATTATGGAGGGAAGGTAGAGGAAGGGAGGAGGTATTTTGATCTTATGACCAAACACTTCAATATCCAACCCACACTTAAGCATTATGGATCCATGGTGGATATTCTGGGACGAGCTGGATTTGTAGAAGAAGCTTATCAGCTAATAAAGAGCATGCCAATGGAGTGCAATGCTGTCATATGGAGAACATTGCTCGCAGCCTGTCAGATGCATGGAAACGTTGAACTCGGGGAGAGAGTAAGTAGCCATGTGCTAGAGATAGTGGCAGATCATAGTAGTGATTATGTTCTTCTTGCAAATATGTACGCAAGTTCTGGTCAATGGAATGAAATGATAAAGACCAGGAAATCAATGCACCGGAAAGGAGTGGAGAAACCAGAGCCAGGTAATAGTTATTTGGAAATCAATCCATTGTAA

Protein sequence

MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEINPL
Homology
[Close]
BLAST of CsGy1G002450 vs. NCBI nr
Match: XP_004138302.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, mitochondrial [Cucumis sativus] >KGN63681.1 hypothetical protein Csa_1G009850 [Cucumis sativus])

HSP 1 Score: 888.3 bits (2294), Expect = 1.3e-254
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF
Sbjct: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG
Sbjct: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSMHRKGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 506

[Close]
BLAST of CsGy1G002450 vs. NCBI nr
Match: XP_008453215.2 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 823.5 bits (2126), Expect = 3.8e-235
Identity = 473/506 (93.48%), Postives = 485/506 (95.85%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MILIN RKLNLALSLCSH KI FS FQL+VPRFIW+SG KTATDTIPNGGYFAKEQ  MF
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLK LNQLHA IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAV VFDRIEN DG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGR RKLLMAFEFYKRMLEKGI XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           LDLF+QMLQSGVEPDEATLVVT+SACSALGALD GRW+HSHVNSNDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAV+YAREMFNA+SGKN+VTWNTMIMGLATHGDAEDALTLFSNML E+VETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACN+GGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNV+LGERVSSHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM +KGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

[Close]
BLAST of CsGy1G002450 vs. NCBI nr
Match: XP_023516362.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.8 bits (1714), Expect = 2.3e-187
Identity = 379/505 (75.05%), Postives = 406/505 (80.40%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLA SLCS V+I F +FQLL+P+FIWSS  KT T+ IPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLARSLCSRVEIKFPHFQLLLPKFIWSSDRKTPTEAIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQ+HA  IR GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQVHARTIRSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIA                 XXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKISGQLGXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA                                       PDGVT
Sbjct: 301 YAKCGAVEEAREMFNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]
BLAST of CsGy1G002450 vs. NCBI nr
Match: XP_022921850.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 659.8 bits (1701), Expect = 7.3e-186
Identity = 338/505 (66.93%), Postives = 364/505 (72.08%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLA SL S V+I F +FQLL+P+FIWSS  KT TD IPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLARSLFSRVEIKFPHFQLLLPKFIWSSDRKTPTDAIPNGCYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQLHA II+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQLHARIIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIA                            
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAADNFTFSFLLKICGQLGSIMLGKQLHVN 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
                                            DE+PK  LVAWN VIDCHVSCGMYNEA
Sbjct: 181 ILKLGLDSHVYVRNTLIHMYGGLKDVKLARNLFDEMPKPGLVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  ND GKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKDNDSGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA                                       PDGVT
Sbjct: 301 YAKCGAVEDAREMFNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH NIQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCNIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]
BLAST of CsGy1G002450 vs. NCBI nr
Match: XP_022987183.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima] >XP_022987184.1 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 652.9 bits (1683), Expect = 8.9e-184
Identity = 394/505 (78.02%), Postives = 421/505 (83.37%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MI++N  K NLALSLCS V+I F +FQLL+P++IWSS  KT TDTIPNG YF+KEQ+F+ 
Sbjct: 1   MIVLNGGKSNLALSLCSRVEIKFPHFQLLLPKYIWSSDPKTPTDTIPNGSYFSKEQRFLS 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCS +KDLNQLHA  I+ GFDQNLFV+GKLI+FCAVS HGDMNYAV VF+RIEN DG
Sbjct: 61  LFKQCSAVKDLNQLHARTIQSGFDQNLFVLGKLIEFCAVSAHGDMNYAVAVFNRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGR   L  AFEFYKRMLEKGIA XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRISNLPKAFEFYKRMLEKGIAAXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        VAWN VIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAWNTVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           L LF+QMLQSGVEPDEATLVVT+SACSALGALD GRWVHSHV  NDRGKTIAVFNSLIDM
Sbjct: 241 LALFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWVHSHVKHNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVE AREMFNA                                       PDGVT
Sbjct: 301 YAKCGAVEDAREMFNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FL VLCACN+GGKVEEGRRYFDLMTKH +IQPT+KHYGSMVDILGRAGFVEEAYQLI+SM
Sbjct: 361 FLGVLCACNHGGKVEEGRRYFDLMTKHCDIQPTVKHYGSMVDILGRAGFVEEAYQLIRSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAAC+MHGNV+LGERV SHVLEI  DHSSDYVLLAN+YASSGQWNEM+
Sbjct: 421 PMECNAVIWRTLLAACRMHGNVKLGERVRSHVLEIEPDHSSDYVLLANIYASSGQWNEMM 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINP 506
           K RKSM RKGV+KPEPGNS+LEINP
Sbjct: 481 KVRKSMQRKGVQKPEPGNSFLEINP 505

[Close]
BLAST of CsGy1G002450 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-78
Identity = 167/466 (35.84%), Postives = 250/466 (53.65%), Query Frame = 0 

Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQ---NLFVIGKLIDFCAVSDHGDMNYAVVVF 115
           Q+   L + CS +  L QLHA  +R  + +    LF+ GK++     S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 116 DRIENADGFLWNTMIRGFGRN-RKLLMAFEFYKRMLEKG-IAXXXXXXXXXXXXXXXXXX 175
           D IEN   F+WNT+IR    +  +   AF  Y++MLE+G  +                  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDC 235
                                                      DE+P+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN---DR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+ +      D 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAERVET-PDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ +R    P+ VTF+ +L ACN+ G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG-NVELGERVSSHVLEIVADHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL AC   G +VEL E ++ +++    D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G+ K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

[Close]
BLAST of CsGy1G002450 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-72
Identity = 128/293 (43.69%), Postives = 200/293 (68.26%), Query Frame = 0 

Query: 214 DELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALD 273
           + LP  D+++WN +I  +    +Y EAL LF +ML+SG  P++ T++  + AC+ LGA+D
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384

Query: 274 CGRWVHSHVNSNDRGKTIA--VFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMG 333
            GRW+H +++   +G T A  +  SLIDMYAKCG +E A ++FN++  K++ +WN MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444

Query: 334 LATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQ 393
            A HG A+ +  LFS M    ++ PD +TF+ +L AC++ G ++ GR  F  MT+ + + 
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 504

Query: 394 PTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSH 453
           P L+HYG M+D+LG +G  +EA ++I  M ME + VIW +LL AC+MHGNVELGE  + +
Sbjct: 505 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 564

Query: 454 VLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
           +++I  ++   YVLL+N+YAS+G+WNE+ KTR  ++ KG++K  PG S +EI+
Sbjct: 565 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEID 615


HSP 2 Score: 65.5 bits (158), Expect = 1.1e-10
Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 0 

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGD-MNYAVVVFDRIENAD 120
           L   C TL+ L  +HA +I++G     + + KLI+FC +S H + + YA+ VF  I+  +
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 121 GFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGI 152
             +WNTM RG   +   + A + Y  M+  G+
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130

[Close]
BLAST of CsGy1G002450 vs. TAIR10
Match: AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 260.0 bits (663), Expect = 3.0e-69
Identity = 146/427 (34.19%), Postives = 225/427 (52.69%), Query Frame = 0 

Query: 69  KDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMIR 128
           K L ++HA ++R GF +   ++ +L++   V   GDM YA  VFD +     FLWNT+ +
Sbjct: 25  KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI--GDMCYARQVFDEMHKPRIFLWNTLFK 84

Query: 129 GFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           G+ RN+    +   YK+M + G+                                     
Sbjct: 85  GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 144

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQML 248
                                    + +   DLVAWNA +   V  G    AL+ F +M 
Sbjct: 145 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 204

Query: 249 QSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVE 308
              V+ D  T+V  +SAC  LG+L+ G  ++      +    I V N+ +DM+ KCG  E
Sbjct: 205 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 264

Query: 309 YAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCAC 368
            AR +F  +  +N+V+W+TMI+G A +GD+ +ALTLF+ M  E +  P+ VTFL VL AC
Sbjct: 265 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR-PNYVTFLGVLSAC 324

Query: 369 NYGGKVEEGRRYFDLM--TKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNA 428
           ++ G V EG+RYF LM  +   N++P  +HY  MVD+LGR+G +EEAY+ IK MP+E + 
Sbjct: 325 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 384

Query: 429 VIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSM 488
            IW  LL AC +H ++ LG++V+  ++E   D  S +VLL+N+YA++G+W+ + K R  M
Sbjct: 385 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 444

Query: 489 HRKGVEK 494
            + G +K
Sbjct: 445 RKLGTKK 448

[Close]
BLAST of CsGy1G002450 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-68
Identity = 145/453 (32.01%), Postives = 238/453 (52.54%), Query Frame = 0 

Query: 54  KEQKFMFLFKQCSTLKDLNQLHASIIRLG-FDQNLFVIGKLIDFCAVSD-HGDMNYAVVV 113
           KEQ+ ++L K+C  + +  Q+HA  I+L  F  + F    ++  CA S     MNYA  +
Sbjct: 29  KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88

Query: 114 FDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXX 173
           F  I++   F +NTMIRG+        A  FY  M+++G                     
Sbjct: 89  FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCH 233
                                                     ++L      +W++++   
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208

Query: 234 VSCGMYNEALDLFVQML-QSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKT 293
              GM++E L LF  M  ++ ++ +E+ +V  + AC+  GAL+ G  +H  +  N     
Sbjct: 209 AGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN 268

Query: 294 IAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLA 353
           I V  SL+DMY KCG ++ A  +F  +  +N +T++ MI GLA HG+ E AL +FS M+ 
Sbjct: 269 IIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK 328

Query: 354 ERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFV 413
           E +E PD V +++VL AC++ G V+EGRR F  M K   ++PT +HYG +VD+LGRAG +
Sbjct: 329 EGLE-PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 388

Query: 414 EEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMY 473
           EEA + I+S+P+E N VIWRT L+ C++  N+ELG+  +  +L++ + +  DY+L++N+Y
Sbjct: 389 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 448

Query: 474 ASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEI 504
           +    W+++ +TR  +  KG+ K  PG S +E+
Sbjct: 449 SQGQMWDDVARTRTEIAIKGL-KQTPGFSIVEL 479

[Close]
BLAST of CsGy1G002450 vs. TAIR10
Match: AT3G56550.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-66
Identity = 137/452 (30.31%), Postives = 236/452 (52.21%), Query Frame = 0 

Query: 54  KEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFD 113
           K +  + + + C+++K L ++H+ +I  G   +  +   L+ FCAVS  G +++A ++FD
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 114 RIENADGFL-WNTMIRGFGRNRKLLMAFEFYKRMLEKGIA-XXXXXXXXXXXXXXXXXXX 173
             ++      WN +IRGF  +   L +  FY RML   ++                    
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCH 233
                                                     DE+P  DLV+WN +I C 
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 234 VSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTI 293
              G++N+AL ++ +M   GV  D  TLV  +S+C+ + AL+ G  +H           +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 294 AVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAE 353
            V N+LIDMYAKCG++E A  +FN +  ++++TWN+MI+G   HG   +A++ F  M+A 
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 354 RVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVE 413
            V  P+ +TFL +L  C++ G V+EG  +F++M+  F++ P +KHYG MVD+ GRAG +E
Sbjct: 304 GVR-PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 363

Query: 414 EAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYA 473
            + ++I +     + V+WRTLL +C++H N+ELGE     ++++ A ++ DYVL+ ++Y+
Sbjct: 364 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 423

Query: 474 SSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEI 504
           ++         RK +    ++   PG S++EI
Sbjct: 424 AANDAQAFASMRKLIRSHDLQ-TVPGWSWIEI 453

[Close]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 2.9e-77
Identity = 167/466 (35.84%), Postives = 250/466 (53.65%), Query Frame = 0 

Query: 56  QKFMFLFKQCSTLKDLNQLHASIIRLGFDQ---NLFVIGKLIDFCAVSDHGDMNYAVVVF 115
           Q+   L + CS +  L QLHA  +R  + +    LF+ GK++     S   D+NYA  VF
Sbjct: 49  QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 108

Query: 116 DRIENADGFLWNTMIRGFGRN-RKLLMAFEFYKRMLEKG-IAXXXXXXXXXXXXXXXXXX 175
           D IEN   F+WNT+IR    +  +   AF  Y++MLE+G  +                  
Sbjct: 109 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 168

Query: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDC 235
                                                      DE+P+  LV+WN++ID 
Sbjct: 169 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 228

Query: 236 HVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSN---DR 295
            V  G Y+ AL LF +M Q   EPD  T+   +SAC+ LG+L  G W H+ +      D 
Sbjct: 229 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 288

Query: 296 GKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSN 355
              + V NSLI+MY KCG++  A ++F  +  +++ +WN MI+G ATHG AE+A+  F  
Sbjct: 289 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 348

Query: 356 MLAERVET-PDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGR 415
           M+ +R    P+ VTF+ +L ACN+ G V +GR+YFD+M + + I+P L+HYG +VD++ R
Sbjct: 349 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 408

Query: 416 AGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHG-NVELGERVSSHVLEIVADHSSD--- 475
           AG++ EA  ++ SMPM+ +AVIWR+LL AC   G +VEL E ++ +++    D+ S    
Sbjct: 409 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 468

Query: 476 ----YVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
               YVLL+ +YAS+ +WN++   RK M   G+ K EPG S +EIN
Sbjct: 469 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK-EPGCSSIEIN 510

[Close]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.4e-71
Identity = 128/293 (43.69%), Postives = 200/293 (68.26%), Query Frame = 0 

Query: 214 DELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALD 273
           + LP  D+++WN +I  +    +Y EAL LF +ML+SG  P++ T++  + AC+ LGA+D
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384

Query: 274 CGRWVHSHVNSNDRGKTIA--VFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMG 333
            GRW+H +++   +G T A  +  SLIDMYAKCG +E A ++FN++  K++ +WN MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444

Query: 334 LATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQ 393
            A HG A+ +  LFS M    ++ PD +TF+ +L AC++ G ++ GR  F  MT+ + + 
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQ-PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 504

Query: 394 PTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSH 453
           P L+HYG M+D+LG +G  +EA ++I  M ME + VIW +LL AC+MHGNVELGE  + +
Sbjct: 505 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 564

Query: 454 VLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 505
           +++I  ++   YVLL+N+YAS+G+WNE+ KTR  ++ KG++K  PG S +EI+
Sbjct: 565 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK-VPGCSSIEID 615

[Close]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match: sp|Q9ZVF4|PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.5e-68
Identity = 146/427 (34.19%), Postives = 225/427 (52.69%), Query Frame = 0 

Query: 69  KDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMIR 128
           K L ++HA ++R GF +   ++ +L++   V   GDM YA  VFD +     FLWNT+ +
Sbjct: 25  KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI--GDMCYARQVFDEMHKPRIFLWNTLFK 84

Query: 129 GFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
           G+ RN+    +   YK+M + G+                                     
Sbjct: 85  GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 144

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQML 248
                                    + +   DLVAWNA +   V  G    AL+ F +M 
Sbjct: 145 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 204

Query: 249 QSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVE 308
              V+ D  T+V  +SAC  LG+L+ G  ++      +    I V N+ +DM+ KCG  E
Sbjct: 205 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 264

Query: 309 YAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCAC 368
            AR +F  +  +N+V+W+TMI+G A +GD+ +ALTLF+ M  E +  P+ VTFL VL AC
Sbjct: 265 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR-PNYVTFLGVLSAC 324

Query: 369 NYGGKVEEGRRYFDLM--TKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNA 428
           ++ G V EG+RYF LM  +   N++P  +HY  MVD+LGR+G +EEAY+ IK MP+E + 
Sbjct: 325 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 384

Query: 429 VIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSM 488
            IW  LL AC +H ++ LG++V+  ++E   D  S +VLL+N+YA++G+W+ + K R  M
Sbjct: 385 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 444

Query: 489 HRKGVEK 494
            + G +K
Sbjct: 445 RKLGTKK 448

[Close]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.1e-67
Identity = 145/453 (32.01%), Postives = 238/453 (52.54%), Query Frame = 0 

Query: 54  KEQKFMFLFKQCSTLKDLNQLHASIIRLG-FDQNLFVIGKLIDFCAVSD-HGDMNYAVVV 113
           KEQ+ ++L K+C  + +  Q+HA  I+L  F  + F    ++  CA S     MNYA  +
Sbjct: 29  KEQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASI 88

Query: 114 FDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXX 173
           F  I++   F +NTMIRG+        A  FY  M+++G                     
Sbjct: 89  FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCH 233
                                                     ++L      +W++++   
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSAR 208

Query: 234 VSCGMYNEALDLFVQML-QSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKT 293
              GM++E L LF  M  ++ ++ +E+ +V  + AC+  GAL+ G  +H  +  N     
Sbjct: 209 AGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN 268

Query: 294 IAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLA 353
           I V  SL+DMY KCG ++ A  +F  +  +N +T++ MI GLA HG+ E AL +FS M+ 
Sbjct: 269 IIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK 328

Query: 354 ERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFV 413
           E +E PD V +++VL AC++ G V+EGRR F  M K   ++PT +HYG +VD+LGRAG +
Sbjct: 329 EGLE-PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 388

Query: 414 EEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMY 473
           EEA + I+S+P+E N VIWRT L+ C++  N+ELG+  +  +L++ + +  DY+L++N+Y
Sbjct: 389 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 448

Query: 474 ASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEI 504
           +    W+++ +TR  +  KG+ K  PG S +E+
Sbjct: 449 SQGQMWDDVARTRTEIAIKGL-KQTPGFSIVEL 479

[Close]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match: sp|Q9LXY5|PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.3e-65
Identity = 137/452 (30.31%), Postives = 236/452 (52.21%), Query Frame = 0 

Query: 54  KEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFD 113
           K +  + + + C+++K L ++H+ +I  G   +  +   L+ FCAVS  G +++A ++FD
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 114 RIENADGFL-WNTMIRGFGRNRKLLMAFEFYKRMLEKGIA-XXXXXXXXXXXXXXXXXXX 173
             ++      WN +IRGF  +   L +  FY RML   ++                    
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCH 233
                                                     DE+P  DLV+WN +I C 
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 234 VSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTI 293
              G++N+AL ++ +M   GV  D  TLV  +S+C+ + AL+ G  +H           +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 294 AVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAE 353
            V N+LIDMYAKCG++E A  +FN +  ++++TWN+MI+G   HG   +A++ F  M+A 
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 354 RVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVE 413
            V  P+ +TFL +L  C++ G V+EG  +F++M+  F++ P +KHYG MVD+ GRAG +E
Sbjct: 304 GVR-PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 363

Query: 414 EAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYA 473
            + ++I +     + V+WRTLL +C++H N+ELGE     ++++ A ++ DYVL+ ++Y+
Sbjct: 364 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 423

Query: 474 SSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEI 504
           ++         RK +    ++   PG S++EI
Sbjct: 424 AANDAQAFASMRKLIRSHDLQ-TVPGWSWIEI 453

[Close]
BLAST of CsGy1G002450 vs. TrEMBL
Match: tr|A0A0A0LUI8|A0A0A0LUI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 8.3e-255
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF
Sbjct: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG
Sbjct: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM
Sbjct: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT
Sbjct: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSMHRKGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 506

[Close]
BLAST of CsGy1G002450 vs. TrEMBL
Match: tr|A0A1S3BWU9|A0A1S3BWU9_CUCME (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494002 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 2.5e-235
Identity = 473/506 (93.48%), Postives = 485/506 (95.85%), Query Frame = 0 

Query: 1   MILINRRKLNLALSLCSHVKINFSNFQLLVPRFIWSSGLKTATDTIPNGGYFAKEQKFMF 60
           MILIN RKLNLALSLCSH KI FS FQL+VPRFIW+SG KTATDTIPNGGYFAKEQ  MF
Sbjct: 1   MILINGRKLNLALSLCSHGKIKFSKFQLVVPRFIWNSGPKTATDTIPNGGYFAKEQNLMF 60

Query: 61  LFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADG 120
           LFKQCSTLK LNQLHA IIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAV VFDRIEN DG
Sbjct: 61  LFKQCSTLKHLNQLHARIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVDVFDRIENPDG 120

Query: 121 FLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FLWNTMIRGFGR RKLLMAFEFYKRMLEKGI XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 FLWNTMIRGFGRIRKLLMAFEFYKRMLEKGIEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYNEA 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELPKTDLVAWNAVIDCHVSCGMYNEA
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPKTDLVAWNAVIDCHVSCGMYNEA 240

Query: 241 LDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLIDM 300
           LDLF+QMLQSGVEPDEATLVVT+SACSALGALD GRW+HSHVNSNDRGKT AVFNSLIDM
Sbjct: 241 LDLFLQMLQSGVEPDEATLVVTVSACSALGALDFGRWIHSHVNSNDRGKTTAVFNSLIDM 300

Query: 301 YAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVT 360
           YAKCGAV+YAREMFNA+SGKN+VTWNTMIMGLATHGDAEDALTLFSNML E+VETPD VT
Sbjct: 301 YAKCGAVDYAREMFNAMSGKNVVTWNTMIMGLATHGDAEDALTLFSNMLTEKVETPDAVT 360

Query: 361 FLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420
           FLAVLCACN+GGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM
Sbjct: 361 FLAVLCACNHGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSM 420

Query: 421 PMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMI 480
           PMECNAVIWRTLLAACQMHGNV+LGERVSSHVLEI  DHSSDYVLLANMYASSGQWNEMI
Sbjct: 421 PMECNAVIWRTLLAACQMHGNVKLGERVSSHVLEIEPDHSSDYVLLANMYASSGQWNEMI 480

Query: 481 KTRKSMHRKGVEKPEPGNSYLEINPL 507
           KTRKSM +KGVEKPEPGNSYLEINPL
Sbjct: 481 KTRKSMQQKGVEKPEPGNSYLEINPL 506

[Close]
BLAST of CsGy1G002450 vs. TrEMBL
Match: tr|A0A2P6P2R4|A0A2P6P2R4_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0181731 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.0e-148
Identity = 265/465 (56.99%), Postives = 318/465 (68.39%), Query Frame = 0 

Query: 36  SSGLKTATDTIPNGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLID 95
           SS     T        F K Q+ M LFKQC+T+K++ QLHA I   G DQ L V+GK+I 
Sbjct: 8   SSSSSFPTKPTMRSNIFHKAQRVMTLFKQCTTMKEVKQLHAHITHTGLDQTLCVLGKVIS 67

Query: 96  FCAVSDHGDMNYAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXX 155
           FCAVSD GDM+YAV VF  IE+ DGFLWNTMIRGFG+  K   AFEF KRM EKG     
Sbjct: 68  FCAVSDLGDMDYAVSVFSSIESPDGFLWNTMIRGFGKTDKPERAFEFCKRMQEKGNVADN 127

Query: 156 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE 215
                                                                     DE
Sbjct: 128 FTLSFLLKVSGQLGSDILGKQIHCTTVKNGFDSNVFVRNTLIHMYGMFGDAKTALHLFDE 187

Query: 216 LPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCG 275
           +P  DLVAWN +ID HV+CG  NEALDLF++M+  GV+ DEAT+VVT+SACS LGALD G
Sbjct: 188 MPSPDLVAWNTIIDSHVNCGKCNEALDLFLRMMDRGVDTDEATVVVTLSACSTLGALDFG 247

Query: 276 RWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSG-KNIVTWNTMIMGLAT 335
           RWVH  V+  D G  + V NSLIDMYAKCGAVE A + FN + G KNIV+WNTMI+GLAT
Sbjct: 248 RWVHCLVDHTDLGNVVTVSNSLIDMYAKCGAVEEAYDAFNKMKGKKNIVSWNTMILGLAT 307

Query: 336 HGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTL 395
           HG A+ +L LF  ML E++E PDGVTFL VLCAC+YGG V+EGRRYF++M+K + IQPT+
Sbjct: 308 HGHADKSLDLFLKMLEEKLERPDGVTFLGVLCACSYGGMVDEGRRYFEIMSKDYQIQPTV 367

Query: 396 KHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLE 455
           KHYG MVD+LGRAGFVEEAY+LI+SMP++CNA++WRTLL+ACQ+HG VELGE+V SH+LE
Sbjct: 368 KHYGCMVDMLGRAGFVEEAYRLIRSMPVKCNAIVWRTLLSACQVHGEVELGEKVRSHLLE 427

Query: 456 IVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNS 500
           + +DHSSDYVLLANMYAS GQWNE ++ R+SM  +GVEKPEPGNS
Sbjct: 428 LASDHSSDYVLLANMYASLGQWNEAMRVRRSMQYRGVEKPEPGNS 472

[Close]
BLAST of CsGy1G002450 vs. TrEMBL
Match: tr|A0A2N9H027|A0A2N9H027_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32881 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.4e-146
Identity = 253/446 (56.73%), Postives = 318/446 (71.30%), Query Frame = 0 

Query: 59  MFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENA 118
           M LFK+C+T+KDL Q+HA II+     NL+VIGK+I FCAVS+HGDM+YA +VFD+IEN 
Sbjct: 1   MSLFKRCATMKDLKQVHAHIIQTCLHHNLYVIGKIIVFCAVSEHGDMDYAGLVFDKIENP 60

Query: 119 DGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXXXXXXXXXXXXX 178
           DGFLWNTMIRGF +  +   AFEFYKRM EKG                            
Sbjct: 61  DGFLWNTMIRGFVKTGQKEKAFEFYKRMQEKGEVADNFTFSFLLKFCGQLGSVMLGKQIY 120

Query: 179 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAVIDCHVSCGMYN 238
                                              +E+P+ DLVAWN ++DCHV+CG   
Sbjct: 121 CDTMKHGLESHVFVRNTLIHMYGMFKDIETARQLFEEIPRPDLVAWNTILDCHVNCGKCK 180

Query: 239 EALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLI 298
           EA+DLF+ MLQ GVEPDEATLVVT+SACSALGALD GRWVHS +N +  G  ++V NSLI
Sbjct: 181 EAIDLFLLMLQRGVEPDEATLVVTLSACSALGALDFGRWVHSCINHSSLGDDVSVSNSLI 240

Query: 299 DMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDG 358
           DMYAKCGAV+ A E FN +  KNIV+WN MI+GLATHG   +AL +FS ML E++  P+ 
Sbjct: 241 DMYAKCGAVDEAYETFNKMKWKNIVSWNIMILGLATHGHTNEALAIFSKMLEEKLVKPND 300

Query: 359 VTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIK 418
           VTFL VLCAC++GG V++G+RYF++M K ++I+PT+KHYG MVD+LGRAGFV EAYQLI+
Sbjct: 301 VTFLGVLCACSHGGMVDDGKRYFNVMIKDYHIKPTIKHYGCMVDVLGRAGFVGEAYQLIR 360

Query: 419 SMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNE 478
           SMP++CNA++WRTLLAAC++HGNVELGE+V SH+LE+  DHSSD+VLLANMYAS GQWN+
Sbjct: 361 SMPVQCNAIVWRTLLAACRLHGNVELGEKVRSHLLELEPDHSSDFVLLANMYASVGQWNK 420

Query: 479 MIKTRKSMHRKGVEKPEPGNSYLEIN 505
           M   RK+M  +GV+KPEPGNS++ I+
Sbjct: 421 MTGVRKAMQDRGVQKPEPGNSFIGIH 446

[Close]
BLAST of CsGy1G002450 vs. TrEMBL
Match: tr|A5B815|A5B815_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019655 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145
Identity = 253/458 (55.24%), Postives = 323/458 (70.52%), Query Frame = 0 

Query: 48  NGGYFAKEQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNY 107
           N G+ ++E++ M +FKQC ++K L QLHA +I+ G +QNLFV+GK+I FCAVS+ G M+Y
Sbjct: 44  NEGFDSREERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDY 103

Query: 108 AVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAXXXXXXXXXXXXXXX 167
           A+ VF +IEN DGFLWNTMIRG GR R+   AFEFYKRM  KG                 
Sbjct: 104 ALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQ 163

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPKTDLVAWNAV 227
                                                         +E+PK+ LVAWN +
Sbjct: 164 LGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTI 223

Query: 228 IDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDR 287
           IDC+V CG Y EA++LF +MLQSG++PD+AT VVT+SAC+ALG LD GR VHS ++    
Sbjct: 224 IDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGL 283

Query: 288 GKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSN 347
           G  ++V NSLIDMYAKCG VE A E+FN + G+NIV+WNTMI+GLA HG  ++AL LFS 
Sbjct: 284 GNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSK 343

Query: 348 MLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRA 407
           ML E++ TP+ VTFL VLCAC++GG VEEGRRYFD+M + +NIQPT+KHYGSMVDILGRA
Sbjct: 344 MLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRA 403

Query: 408 GFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLA 467
           G VEEAY+LIKSMP+E N+++WRTLLAAC++HGN+EL E+V   +LE+  DHSSDYVLLA
Sbjct: 404 GLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLA 463

Query: 468 NMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEINP 506
           NMYAS+GQWN++ + RKSMH +GV+KP+PGNSY+   P
Sbjct: 464 NMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYIGFQP 501

The following BLAST results are available for this feature:
BLAST of CsGy1G002450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138302.11.3e-254100.00PREDICTED: pentatricopeptide repeat-containing protein At1g59720, mitochondrial ... [more]
XP_008453215.23.8e-23593.48PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/... [more]
XP_023516362.12.3e-18775.05pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
XP_022921850.17.3e-18666.93pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_022987183.18.9e-18478.02pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
BLAST of CsGy1G002450 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G59720.11.6e-7835.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G08070.11.3e-7243.69Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G01510.13.0e-6934.19Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G31920.11.2e-6832.01Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G56550.11.8e-6630.31Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy1G002450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WQW5|PPR85_ARATH2.9e-7735.84Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
sp|Q9LN01|PPR21_ARATH2.4e-7143.69Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q9ZVF4|PP140_ARATH5.5e-6834.19Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... [more]
sp|Q9C6T2|PPR68_ARATH2.1e-6732.01Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
sp|Q9LXY5|PP284_ARATH3.3e-6530.31Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX... [more]
BLAST of CsGy1G002450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LUI8|A0A0A0LUI8_CUCSA8.3e-255100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009850 PE=4 SV=1[more]
tr|A0A1S3BWU9|A0A1S3BWU9_CUCME2.5e-23593.48pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
tr|A0A2P6P2R4|A0A2P6P2R4_ROSCH4.0e-14856.99Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen... [more]
tr|A0A2N9H027|A0A2N9H027_FAGSY6.4e-14656.73Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32881 PE=4 SV=1[more]
tr|A5B815|A5B815_VITVI1.8e-14555.24Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_019655 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G002450.1CsGy1G002450.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 222..256
e-value: 2.8E-9
score: 34.6
coord: 323..356
e-value: 4.7E-6
score: 24.4
coord: 122..154
e-value: 6.8E-8
score: 30.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 194..217
e-value: 0.14
score: 12.3
coord: 463..491
e-value: 0.36
score: 11.1
coord: 397..421
e-value: 0.0022
score: 18.0
coord: 293..316
e-value: 0.0022
score: 18.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 320..368
e-value: 2.0E-9
score: 37.4
coord: 121..163
e-value: 2.8E-10
score: 40.1
coord: 220..266
e-value: 3.7E-11
score: 42.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..320
score: 7.75
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 357..387
score: 7.092
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..423
score: 7.618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..219
score: 6.917
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 459..493
score: 7.914
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 12.595
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 119..153
score: 11.422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 6.106
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 425..455
score: 5.601
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 321..355
score: 10.731
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 372..502
e-value: 3.1E-16
score: 61.8
coord: 34..179
e-value: 1.8E-16
score: 62.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 272..371
e-value: 2.1E-18
score: 68.3
coord: 180..271
e-value: 6.3E-20
score: 73.2
NoneNo IPR availablePANTHERPTHR24015:SF987SUBFAMILY NOT NAMEDcoord: 81..503
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 81..503

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G002450Cla019101Watermelon (97103) v1cgybwmB094
CsGy1G002450Csa1G009850Cucumber (Chinese Long) v2cgybcuB001
CsGy1G002450ClCG06G016090Watermelon (Charleston Gray)cgybwcgB078
CsGy1G002450CSPI01G02400Wild cucumber (PI 183967)cgybcpiB001
CsGy1G002450CmaCh10G002000Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G002450CmoCh10G002180Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G002450Lsi06G014550Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G002450Cp4.1LG04g15010Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G002450CsaV3_1G002450Cucumber (Chinese Long) v3cgybcucB002
CsGy1G002450Cla97C06G125670Watermelon (97103) v2cgybwmbB076
CsGy1G002450Bhi06G000315Wax gourdcgybwgoB009
CsGy1G002450Bhi02G000217Wax gourdcgybwgoB085
CsGy1G002450Carg17953Silver-seed gourdcarcgybB0470
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G002450Watermelon (97103) v2cgybwmbB054
CsGy1G002450Watermelon (97103) v2cgybwmbB058
CsGy1G002450Watermelon (97103) v2cgybwmbB088
CsGy1G002450Wax gourdcgybwgoB050
CsGy1G002450Wax gourdcgybwgoB067
CsGy1G002450Wax gourdcgybwgoB092
CsGy1G002450Melon (DHL92) v3.6.1cgybmedB043
CsGy1G002450Cucumber (Gy14) v2cgybcgybB002
CsGy1G002450Cucurbita maxima (Rimu)cgybcmaB040
CsGy1G002450Cucurbita maxima (Rimu)cgybcmaB103
CsGy1G002450Cucurbita maxima (Rimu)cgybcmaB106
CsGy1G002450Cucurbita maxima (Rimu)cgybcmaB130
CsGy1G002450Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G002450Cucurbita moschata (Rifu)cgybcmoB100
CsGy1G002450Cucurbita moschata (Rifu)cgybcmoB119
CsGy1G002450Cucurbita pepo (Zucchini)cgybcpeB014
CsGy1G002450Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G002450Cucurbita pepo (Zucchini)cgybcpeB061
CsGy1G002450Cucurbita pepo (Zucchini)cgybcpeB101
CsGy1G002450Cucumber (Chinese Long) v2cgybcuB004
CsGy1G002450Bottle gourd (USVL1VR-Ls)cgyblsiB021
CsGy1G002450Bottle gourd (USVL1VR-Ls)cgyblsiB040
CsGy1G002450Melon (DHL92) v3.5.1cgybmeB024
CsGy1G002450Melon (DHL92) v3.5.1cgybmeB048
CsGy1G002450Melon (DHL92) v3.6.1cgybmedB005
CsGy1G002450Melon (DHL92) v3.6.1cgybmedB024
CsGy1G002450Watermelon (Charleston Gray)cgybwcgB003
CsGy1G002450Watermelon (Charleston Gray)cgybwcgB054
CsGy1G002450Watermelon (97103) v1cgybwmB004
CsGy1G002450Watermelon (97103) v1cgybwmB065
CsGy1G002450Wild cucumber (PI 183967)cgybcpiB003
CsGy1G002450Silver-seed gourdcarcgybB0053
CsGy1G002450Silver-seed gourdcarcgybB0611
CsGy1G002450Cucumber (Chinese Long) v3cgybcucB004
CsGy1G002450Cucumber (Chinese Long) v3cgybcucB039