CsGy1G001240 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G001240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprobable kinetochore protein SPC25
LocationChr1 : 728606 .. 733469 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTTACCGAACATTAAAAATGGGCCATGACAATCTGGGCTCAAAATCGTTATTGCCTACAATGGACCGAGGGCCTGCCCAAGGGGAATCATTTACACCATCGTCATCGTCCGTCGATATTCTCTTCAGAAAGAATAATTTAATTTTGAAGGTTTGAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGAGAGAATGGAGAACAAGGCGAATGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCCTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTACAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGTGAGCTATCTATTTTCTTCAATTTACTTGGGAAAGATATGGGTGTGAAACTTGTTACTGTGGTCACTTACGACACTGTAATCGGCATTAGAATGGTTTGTGAAGTGACCATTAGGGTTTTGAAATGGGTAGCGATTAAGACTCAGAATGGATGTAATTCTAGGGAATTGAGTTGGAGTTGGTTCAGAAGTGGCAAAGTTTACTTTGAAATTTCTTGTTTCATTTTTTATTTATTTGTTGATGTATATTTTTTGAATTCTCAGGCAAACTGGGGGAACTAAAAGCGAGGCTGAGGGAGACGGAAGATGAACTGGTTAAAGCTCTTGCAGGTATGAGCTATGATTATGCTACTTTCCTTCAACGCTGTATGAGTTAGAATATACTACTTCGTTGAAGATTGATTCGACTTGAAGTGGCATTTAAGAGTTGAGTTATTTTTCCACTAAAATTGTTGAGAATCTTTTACAACGGTAGTGCTTTGGATTTGGAGTAAGTGATGGGCGAAATGTTGGTGTTTGTGATGCTGGTATATTGTTTCTTACTTAAAATTATCGCTCATCGTAAGGGCTGATTTCCTTTATACTTGGATATTTTTGTAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAACAGAAGAGCTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGGTAATGTCTGTCAATCTTATTTTCTTTCAGACCCAGTCTTCCTTTATGCAAACAGAAAACTTCACATGGACTGAAGGGAAATTAAATTGGATATGCATTGATCAATCTTTATTTGCTACTTACTTGCAAGATCTCTTCCACAATTCTTTTGCAAACTTCAACTTTCGAAGTTCCATACGATAACTGATTACTTCTCTCTCTTTCCAATGCTATCTATAGTTCTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGTATGATAATTCAAGTTTGTTTTTGAAGAATCTCAACAGTTTTTGGGAAGCTTGAGATAAATTTGCTGACAACATCTCTCGGCATTTCAGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTGTAAGTGTTATCATACGTGCACTTAATATATGTTGATTTTTCTAGCTCATTATCTTCTGACAACCTGTATTTTTTTTCCTCGACTTTTTAGTGTTAGATTGTAACCCATCCTTGTCAGATATTAAGGAGTTGATACATGAATTAAATAAGACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGTGTGCCCTGAGTTTTTAACTTTTCGCTTGAAAGGTATTTTTCCACTAAACGGTTATACGTTTGCTATTCAACAGGAGCTGGGGCTCCAGCATTGTCTCTCCACCAAGGTTCATCAGTAATCTCTACGTCAGCCCCAGTCTTGTCATCATCAACCGAGGGAAGTGAATCTTCAACTGAAGAAATTAACATAGATGAAGTTGAGGAAACCAACAAACATTCTAAGAACATTTTACCCAGAAAGAACCCAGCTATCCACTCCAGTGGATCTGCATTTTCTTTGCGTCGATCTCCTCGTTTTAAGGTATGTTCAATTTTAATGTTTGATGTCTGCTGATATTGATTTAGGATTCTCGGGTATGTGATACTAAGAGGATACTATAAGTCTATATCTTCTATGTATAACAGGTTGATCTTTTTTTTAAAGCACATTTCAAATTGTTATGCAAAAGAGAATTACTAATAAAATGCCACCTCGTATGGCAGGTCAGGAAATAAGGTTGGAGGCTGTTAATGATTGAACAAGTATTAGGTTGATGGGCTTAGCCTTTTGCTTCCATGACATGAATTGCTTTGCAATTAACGTTGATTATGCCATTATGGGTCCTGATCTCAACATTTTCCAGAACTTCTCTGACTACTCTGAAGGGTCCATATCATAAAAGTGAAGTTGAAGAAGGCTTTATCCATGACCTGTTGTATGTTCGTTGTATCTGATTTGTTTTTGTGTATTATTTTACACGAAGTTATGGTTTTCATGTAATGCATGGGGTGATTATCCCAAATGTACCGAATGCCAGTACTTTGTATCAATCTGATCTGTTCTAGGTTCCACATCATCGGACTTAAGTTAAGGTTTGTGCAGTTTTAAATTAATTAATTGTGAAAGCTTGAAGGTGAAACACTGAATGTTCACTTTTCTATGAAATTAAGTTAGTGTATAACGATGTGATTTACATTCTTTAATTAGTAGGTTTTCAATCATTGTCTGCTTTGTTGCTCTTTTTGCAGGGAATTTCCTGAAAGCAAAATATTTTACACTGCCTATTGATATTATTTGACTTTACTGTAGGTTGAGTAATACATTATTTGAATAGGGCTGAAGGGGGAAGACTTTCTAGCCCCTGTATCTTTCAGGTATTCATTAAATTGACTTTCTATCTATATAACTGTTTAATGACAAACTTATGCTCATTACATCTAAACCTAGATTTTTTTACAAAATGTTGAATAATATTTGACTAGGAGGGAAGTTTGCTTAGTCGTCTATTGATTAAGTTGCGAGTTTGAGTCCATAACTTTTGTGCTTCTAACTCATCATTGGCTAAGGATGAGCAGTTAGTCTCGTTACAATCTGCGTAAAATTTTCCACTCTTTCCTTCTGTTTGCGAACTCAGTGCTACGTAGCATGTTGTTGATGCTCCCTGCATAGCCATTTTATGTATTTTGTGAGTTAAATCAATCATTAATGGTGTTGGGGGTTGCTTCTGATGATTAATCATACCTGACTTGTAGTTTTAAGTAACTTTGATGCCATAAAAAACAATGAATCTGCACAGGAAAGTTTGAGAAGTCAGTTGCCCTCTTGCTCGTGTTGAAGGGTGAATGCTTTACATTATTCATATGCATAAGAAACAAGTTAACAGTGAAGTTGCAGGAAATACTATAACATCTACCTGTGATAAAGCCCTTGTGAGCTCTAATGATGGCAGTTTTTACAATTCCTGGATGAACTGCATTTATGGTGACTCTGGCATTTCTTCCCTGCCACCCCACCAAAAAGACCTCGGGTGAGTCACTGAATTCTTTTCAATTTCTCATTTAATTGCTTATGTTTCTTAGAATTGTTAGCTAGCTGAGTATTTGAAGAATTTGATACTTTTAGGAATAAGGTTGAGGGTTCATTTTATTGAATAAGGAAGAATGCGAAATGATACTGGAAGACTCTACCTGAAGTTGCCTTGATAGTTCCTTAGCATGCAAGATATTGGCTAGTTTTGATTGAGCATATGCACGAGTGCCATTGTAACTGCAAATAAACCACGATTCTTCAATATTTCTTCCACCATGGCAGAGAGAGGATTAGGGGTATAGGTAGAGTGTACTATTATAGCTCATTTTATGTTTAGAACTCCAATTTTAGACCAATTTTAGACGTTGTTTTTAATTCTTATTAACTTACAATTAACTATAATATTATTAACCAATCATAAGTTGGCCTAGTCATAAATATGGAGGTATGACCTTGATACAAGACAAAGAGGTTGGTTCAACCTATGGTGGTCACCTACTTGTGATATGGTATCCTAATTGACACTCAAATATTATAGGGTTAGATAAGATATTCTGTGAGATTAATCGTAAGTTAACTCGAGTACTTACGAATAATCAAACTAAAATAGTTTGTACCTTGAACACACTTTCATGACTTATTAAACTACGTACATTGTGGACACCACAACCAAACAACCAATGAGATATCTTTTTAGACTAAACAACTTCACTCCTTGCCCTAAACATTATAGGATTGTTTGACTTGCAGACTTGTTAGGTAGGTATAAACAACTCAGTTTATGTTGTATTTTTTTAATACTTTTTAAGTAAATTCATCTTAGTATTTTTCAGTACTTTCTACATTTACTAAAGAACTTCATCTTTCCCTTTTTATCTCTAGTTTTCACATTTACCAAATAACTTCGTCTTAATCTACTTTTCACAATTATTGAGTAACTTTTGTTCCACACTCCGAACAAAAACTTATCACCTCCAACATATCAACCTTAGATTTATTAACTTATTAACTCCACTTGAGGGCACACGCTCTTACGTGGTTTTTTAGTGCAAGGAGGCTCTAAATATGATTGGCCATACCTGTTTGGGTTGAGCATTTGACGAAAGCTTAAACCATCTTTCTTCACCCAGCCATGAACCACCGATGAAACGTTGATAATCCTTCCTTCAATTCCTGTCTTGGCTGCTGTTTCTATCATTTTCTCTAACAGCCTCTCTGTTAG

mRNA sequence

GGCTTACCGAACATTAAAAATGGGCCATGACAATCTGGGCTCAAAATCGTTATTGCCTACAATGGACCGAGGGCCTGCCCAAGGGGAATCATTTACACCATCGTCATCGTCCGTCGATATTCTCTTCAGAAAGAATAATTTAATTTTGAAGGTTTGAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGAGAGAATGGAGAACAAGGCGAATGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCCTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTACAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGCAAACTGGGGGAACTAAAAGCGAGGCTGAGGGAGACGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAACAGAAGAGCTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGGAGCTGGGGCTCCAGCATTGTCTCTCCACCAAGGTTCATCAGTAATCTCTACGTCAGCCCCAGTCTTGTCATCATCAACCGAGGGAAGTGAATCTTCAACTGAAGAAATTAACATAGATGAAGTTGAGGAAACCAACAAACATTCTAAGAACATTTTACCCAGAAAGAACCCAGCTATCCACTCCAGTGGATCTGCATTTTCTTTGCGTCGATCTCCTCGTTTTAAGCCTCTCTGTTAG

Coding sequence (CDS)

ATGGAGAACAAGGCGAATGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCCTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTACAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGCAAACTGGGGGAACTAAAAGCGAGGCTGAGGGAGACGGAAGATGAACTGGTTAAAGCTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAACAGAAGAGCTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGATGAATATGCTACAATTATATCTCAGCAATCCTTAGGAGCTGGGGCTCCAGCATTGTCTCTCCACCAAGGTTCATCAGTAATCTCTACGTCAGCCCCAGTCTTGTCATCATCAACCGAGGGAAGTGAATCTTCAACTGAAGAAATTAACATAGATGAAGTTGAGGAAACCAACAAACATTCTAAGAACATTTTACCCAGAAAGAACCCAGCTATCCACTCCAGTGGATCTGCATTTTCTTTGCGTCGATCTCCTCGTTTTAAGCCTCTCTGTTAG

Protein sequence

MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLGELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYATIISQQSLGAGAPALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSGSAFSLRRSPRFKPLC
Homology
[Close]
BLAST of CsGy1G001240 vs. NCBI nr
Match: XP_004138099.1 (PREDICTED: uncharacterized protein LOC101205655 [Cucumis sativus] >KGN63556.1 hypothetical protein Csa_1G004230 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 203/312 (65.06%), Postives = 203/312 (65.06%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSL----------------------------------------------------- 180
           IISQQSL                                                     
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   GAGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

[Close]
BLAST of CsGy1G001240 vs. NCBI nr
Match: XP_008464538.1 (PREDICTED: probable kinetochore protein SPC25 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 3.1e-74
Identity = 189/312 (60.58%), Postives = 194/312 (62.18%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLR  EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSL----------------------------------------------------- 180
           IISQQSL                                                     
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   G+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

[Close]
BLAST of CsGy1G001240 vs. NCBI nr
Match: XP_022134671.1 (uncharacterized protein LOC111006883 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 160/313 (51.12%), Postives = 176/313 (56.23%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           MENK  DS+R ++E LR++RE EIPVQQQKMESFADSF KS+ESI+VRSR NALSQGKLG
Sbjct: 1   MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLRE EDELVKALAVKTRKEAKRL I DS+A SKSR EELRNTLQDCKA+RDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120

Query: 121 IISQQSL----------------------------------------------------- 180
           IISQQSL                                                     
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   G GA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240

[Close]
BLAST of CsGy1G001240 vs. NCBI nr
Match: XP_023516085.1 (probable kinetochore protein SPC25 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 5.6e-52
Identity = 154/313 (49.20%), Postives = 170/313 (54.31%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           MENKA DSV  R+E LRI+RE EI VQQQKMESFADSF KS+ESI+ RSR NA SQGKLG
Sbjct: 1   MENKAEDSVCERMESLRIVREKEIAVQQQKMESFADSFRKSLESITARSRENARSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLRE EDELVKALAVKTRKEAKRL + DS+ATSKSR EELRN LQDCKARRDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLALTDSLATSKSRIEELRNNLQDCKARRDEYST 120

Query: 121 IISQQSL----------------------------------------------------- 180
            IS+QSL                                                     
Sbjct: 121 TISRQSLALSPYEHKEPQESDCRNEIQEAISWYNRVLDFHIEGGHGVKFSFKKINVDDPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   G GA
Sbjct: 181 KEYSFTIRHGNDTYTLLDCNPSLQGIEELIHELNNTNGLFKFVRIMRRRFQEAAAEGVGA 240

[Close]
BLAST of CsGy1G001240 vs. NCBI nr
Match: XP_022921533.1 (probable kinetochore protein SPC25 isoform X2 [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 7.3e-52
Identity = 153/313 (48.88%), Postives = 170/313 (54.31%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           MENKA +SV AR+E LRI+RE EI V+QQKMESFADSF KS+ESI+ RSR NA SQGKLG
Sbjct: 1   MENKAEESVCARMESLRIVREKEIAVEQQKMESFADSFRKSLESITARSRENARSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLRE EDELVKALAVKTRKEAKRL + DS+ATSKSR EELRN  QDCKARRDEY+T
Sbjct: 61  ELKARLREAEDELVKALAVKTRKEAKRLALTDSLATSKSRIEELRNNFQDCKARRDEYST 120

Query: 121 IISQQSL----------------------------------------------------- 180
            IS+QSL                                                     
Sbjct: 121 TISRQSLALSPYEHKEPQESDCRNEIQEAISWYNRVLDFHIEGGHGVNFSFKKINVDDPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   G GA
Sbjct: 181 KEYSFTIRHANDTYTLLDCNPSLQGIEELIHELNNTNGLFKFVRIMRRRFQEAAAEGVGA 240

[Close]
BLAST of CsGy1G001240 vs. TAIR10
Match: AT3G48210.1 (Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255))

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 0 

Query: 7   DSVRARLEKLRILRENEIPVQQQKMESF-ADSFYKSVESISVRSRANALSQGKLGELKAR 66
           D+ +  +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYATIISQQ 126
           LRE EDELVK LAVKTRKEA+++ I DSI+ ++SR E LR  LQ  K+++D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

[Close]
BLAST of CsGy1G001240 vs. Swiss-Prot
Match: sp|Q93VK9|SPC25_ARATH (Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-16
Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 0 

Query: 7   DSVRARLEKLRILRENEIPVQQQKMESF-ADSFYKSVESISVRSRANALSQGKLGELKAR 66
           D+ +  +  L ++ E +I  Q+ K++SF A  F +S+ S+  R++A A SQ +L  LKA 
Sbjct: 11  DTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMNLKAD 70

Query: 67  LRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYATIISQQ 126
           LRE EDELVK LAVKTRKEA+++ I DSI+ ++SR E LR  LQ  K+++D+   IISQQ
Sbjct: 71  LREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRIISQQ 130

[Close]
BLAST of CsGy1G001240 vs. TrEMBL
Match: tr|A0A0A0LU84|A0A0A0LU84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.1e-83
Identity = 203/312 (65.06%), Postives = 203/312 (65.06%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG
Sbjct: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSL----------------------------------------------------- 180
           IISQQSL                                                     
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   GAGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240

[Close]
BLAST of CsGy1G001240 vs. TrEMBL
Match: tr|A0A1S3CM71|A0A1S3CM71_CUCME (probable kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74
Identity = 189/312 (60.58%), Postives = 194/312 (62.18%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1   MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKARLR  EDELVKALAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61  ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120

Query: 121 IISQQSL----------------------------------------------------- 180
           IISQQSL                                                     
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180

Query: 181 --------------------------------------------------------GAGA 204
                                                                   G+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240

[Close]
BLAST of CsGy1G001240 vs. TrEMBL
Match: tr|A0A2N9J1I6|A0A2N9J1I6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58063 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.6e-33
Identity = 94/200 (47.00%), Postives = 128/200 (64.00%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           ME++A + VR ++E LR+L E EIP+QQQKM+SFA SF+KS++SI   ++    +QGK+G
Sbjct: 1   MESQAEEPVRKKMESLRLLCEREIPIQQQKMDSFAASFFKSLQSIQSTAQQTLQNQGKVG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           ELKA+LRE ED++VKALAVKTRKEAKR+ I+DSI+   +R EEL+ ++Q   A+RD+YAT
Sbjct: 61  ELKAKLREAEDDMVKALAVKTRKEAKRMAIMDSISAKNARVEELKRSVQLLMAKRDQYAT 120

Query: 121 IISQQSLGAGA-------------------------------------PALSLHQGSSVI 164
           ++SQQSL   A                                     P L+ HQ SS+I
Sbjct: 121 VVSQQSLALAASEEKSNKNDECKGETQEAISWYNRVLGFHVEAGHGFLPQLTNHQESSMI 180

[Close]
BLAST of CsGy1G001240 vs. TrEMBL
Match: tr|A0A2I4DPJ7|A0A2I4DPJ7_9ROSI (uncharacterized protein LOC108982219 OS=Juglans regia OX=51240 GN=LOC108982219 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.2e-27
Identity = 71/128 (55.47%), Postives = 97/128 (75.78%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           ME +  D+VRA ++ LR++ + EIP+QQQ+M +   SF KS+ESI  R+R    SQGKLG
Sbjct: 1   MEIREEDTVRANMDSLRLISDREIPIQQQRMGTLTASFRKSLESIGDRARETVQSQGKLG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           +LK +LRE EDE+VKALAVKTRKEA R+  +D+IA  K+R EEL+ + ++ +A+RD+YA 
Sbjct: 61  QLKDKLREAEDEMVKALAVKTRKEAMRMAKMDAIAAQKARVEELKRSAEEQRAKRDQYAA 120

Query: 121 IISQQSLG 129
           IISQQ LG
Sbjct: 121 IISQQYLG 128

[Close]
BLAST of CsGy1G001240 vs. TrEMBL
Match: tr|A0A2I4G1E3|A0A2I4G1E3_9ROSI (uncharacterized protein LOC109003853 isoform X1 OS=Juglans regia OX=51240 GN=LOC109003853 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.2e-27
Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 0 

Query: 1   MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
           ME +A D+VR ++E LR++ + EIP+QQ+KM+S   SF KS+E I V +R    + GK+G
Sbjct: 1   METQAEDTVRRKMESLRLIYDGEIPIQQRKMDSLKASFRKSLELIGVTARETFQNHGKIG 60

Query: 61  ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
           E+KA+LR  ED+LVKALAVKTRKEA+R+  +D+IA  K+R EELR ++Q+ +A RDEYA 
Sbjct: 61  EVKAKLRLAEDDLVKALAVKTRKEAERMAKMDAIAAQKARVEELRRSVQEQRANRDEYAA 120

Query: 121 IISQQSL 128
           IISQQ L
Sbjct: 121 IISQQFL 127

The following BLAST results are available for this feature:
BLAST of CsGy1G001240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138099.14.7e-8365.06PREDICTED: uncharacterized protein LOC101205655 [Cucumis sativus] >KGN63556.1 hy... [more]
XP_008464538.13.1e-7460.58PREDICTED: probable kinetochore protein SPC25 [Cucumis melo][more]
XP_022134671.11.5e-5751.12uncharacterized protein LOC111006883 [Momordica charantia][more]
XP_023516085.15.6e-5249.20probable kinetochore protein SPC25 [Cucurbita pepo subsp. pepo][more]
XP_022921533.17.3e-5248.88probable kinetochore protein SPC25 isoform X2 [Cucurbita moschata][more]
BLAST of CsGy1G001240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48210.11.4e-1747.50Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255)[more]
BLAST of CsGy1G001240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93VK9|SPC25_ARATH2.6e-1647.50Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 ... [more]
BLAST of CsGy1G001240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LU84|A0A0A0LU84_CUCSA3.1e-8365.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=4 SV=1[more]
tr|A0A1S3CM71|A0A1S3CM71_CUCME2.0e-7460.58probable kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=4 ... [more]
tr|A0A2N9J1I6|A0A2N9J1I6_FAGSY6.6e-3347.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58063 PE=4 SV=1[more]
tr|A0A2I4DPJ7|A0A2I4DPJ7_9ROSI3.2e-2755.47uncharacterized protein LOC108982219 OS=Juglans regia OX=51240 GN=LOC108982219 P... [more]
tr|A0A2I4G1E3|A0A2I4G1E3_9ROSI9.2e-2755.91uncharacterized protein LOC109003853 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G001240.1CsGy1G001240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..206
NoneNo IPR availablePANTHERPTHR14281FAMILY NOT NAMEDcoord: 7..127

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G001240Cla019214Watermelon (97103) v1cgybwmB094
CsGy1G001240Csa1G004230Cucumber (Chinese Long) v2cgybcuB001
CsGy1G001240MELO3C026277Melon (DHL92) v3.5.1cgybmeB048
CsGy1G001240ClCG06G017200Watermelon (Charleston Gray)cgybwcgB078
CsGy1G001240CSPI01G01180Wild cucumber (PI 183967)cgybcpiB001
CsGy1G001240CmaCh10G001120Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G001240CmoCh11G000830Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G001240CmoCh10G001160Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G001240Lsi06G015710Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G001240Cp4.1LG18g08490Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G001240MELO3C026277.2Melon (DHL92) v3.6.1cgybmedB043
CsGy1G001240CsaV3_1G001290Cucumber (Chinese Long) v3cgybcucB002
CsGy1G001240Cla97C06G126890Watermelon (97103) v2cgybwmbB076
CsGy1G001240Bhi02G000370Wax gourdcgybwgoB092
CsGy1G001240Carg10333Silver-seed gourdcarcgybB0371
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G001240Cucurbita maxima (Rimu)cgybcmaB066
CsGy1G001240Cucurbita maxima (Rimu)cgybcmaB099
CsGy1G001240Cucurbita moschata (Rifu)cgybcmoB062
CsGy1G001240Cucurbita moschata (Rifu)cgybcmoB093
CsGy1G001240Cucurbita moschata (Rifu)cgybcmoB121
CsGy1G001240Cucurbita pepo (Zucchini)cgybcpeB012
CsGy1G001240Cucurbita pepo (Zucchini)cgybcpeB062
CsGy1G001240Cucurbita pepo (Zucchini)cgybcpeB085
CsGy1G001240Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G001240Bottle gourd (USVL1VR-Ls)cgyblsiB032
CsGy1G001240Melon (DHL92) v3.5.1cgybmeB015
CsGy1G001240Melon (DHL92) v3.6.1cgybmedB013
CsGy1G001240Watermelon (Charleston Gray)cgybwcgB002
CsGy1G001240Watermelon (Charleston Gray)cgybwcgB025
CsGy1G001240Watermelon (Charleston Gray)cgybwcgB086
CsGy1G001240Watermelon (97103) v1cgybwmB003
CsGy1G001240Wild cucumber (PI 183967)cgybcpiB009
CsGy1G001240Wild cucumber (PI 183967)cgybcpiB033
CsGy1G001240Silver-seed gourdcarcgybB0990
CsGy1G001240Silver-seed gourdcarcgybB1031
CsGy1G001240Cucumber (Chinese Long) v3cgybcucB009
CsGy1G001240Watermelon (97103) v2cgybwmbB013
CsGy1G001240Watermelon (97103) v2cgybwmbB087
CsGy1G001240Wax gourdcgybwgoB008
CsGy1G001240Wax gourdcgybwgoB054
CsGy1G001240Cucumber (Gy14) v2cgybcgybB004
CsGy1G001240Cucurbita maxima (Rimu)cgybcmaB028