CsGy1G001140 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G001140
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 653564 .. 656880 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAAAGGTGGAGATGGTATATGTTATGTCAATGTCAAAATATATTAAGGATGGAGAATTCAAAATTCTCTATAACGTGTAAGATACCCAAACTGTTTTGAGTAAAAAAAATCATCTTACCCTTGCAATCCAATGCCCACTCAACATACTATGATTCTTTCTTCAATTTGCATGTCATTCTTCAACTATCTTTCTTCATACACGACCAGAGTTGTACAGTGAAACATGGTTGAAAGTTAATGATCTAAAGCTTTTCATGTCGTTTAATCTCCATATCCTCACGACGGAGCTTTCCAAGAGTTTTCTAACTCTTTTACGAACAAAGGAACTGCATGCTTTTATTACCAAATCCCATCTTGCTTCCGACCCATTTTACGCAACTAGAATTGTTAAGCTCTACTCCATCAATGCTAAACTCGGTTATGCCCGCCATTTGTTTGACAAAACTCCCAACCGAAGTGTCTACCTTTGGAACTCAATCATTCGAGCTTACGCGAAAGCATATAAATTCAGGGATGCATTATCTCTGTTCCTCACAATGTCTGGAACTGAGACATCGCCCGATAACTTCACTTATTCATGCATCATAAGGGCATGCTCTGAGAATCACCATAGAGAATGGCTTAAGTTTGTTCATGGACGAGTTTTAGTAACTGGGTTTGGATTAGATCCTATTTGTTGCAGCGCTCTAGTGACTGCATACTCAAATCTGGACCTTATTGAAGAGGCCAGCAAAGTGTTTGGTAGAATACAACATCCAGACTTGGTTATGTGGAACTCAATCATTTGTGGATTTGGGTCTTGTGGGTATTGGAATCAGGGGCTTTTGTTATTTTCTAGGATGAGGAATCTGGGAGAACTTCCGGATGGATACACGGTAGTTGGTGTGGCATCGGGTATAGCAGAACCCAGCCTACTGAGCACTGGCAAAGGCATTCATGGACTTTGCCTCAAGTGTAATTTTGACTCTAATGAGCATGTAGCTAGTGCACTTGTGAGTATGTATTCGAGGTGTAATTGCATGGATTCAGCATATTTAGTATTTAGTAGTTTGTTACAGCCTGACTTAGTTACATGGTCTGCTTTAATAACTGGGTATTCTCAAGCTGGTGACTTTAGGAAAGCAATGTTGTTCTTTCAGAGACTGAATATGCAGGGTAAGAAGATGGATTCTATTTTGATTGCCAGCATTTTGGCTGCTACTGCTCAATCGACCAACATAAGGCATGGAATTGAGATACATGGTTATGTTCTTCGACAAGGGATAGAATCAAACGAGATGATATCTTCTTCTCTCATAGACATGTATTCCAAGTGTGGTTATTTGAGTTTAGGAATTCGTGTTTTTCACGTTATGTCACAAAAAAATATCTCGACATACAATTCTGTAATATGGGGACTTGGTTTGCATGGACTTGCATCAAAGGCATTGGAGATGTTTGAAGAGTTGTTGACCATTGGTTTAGTGCCTAATGAGTCCACTTTCTCTGCTCTCCTCTTTGCGTGCTGCCATGCTGGTCTTAACTCTGTTGGCAAGGAGATTTTCAAACGAATGAAAGATGAGTTTTGCATCAAATACAAAACAGAGCATTACGTTTACATTGTAAAACTTCTTGGAATGACTGGGAATTAGAAGTGGCTTACAATCTTGTCATGTCCTTACCAGAGCCTGCAGACTCTGGAATTTGGGGAGCTCTACTCTCTTGCTGTGATGCTTGTGGGAACGTTGAACTGGCTGAAGTTGTTGCTCAACGGCTCATAGAAAATGATCCTGAAAAAACTGTTTATAAAGTAATGCTCTCTAATATTTATGCTGGAGATGGGAGATGGGATGATGTGAAGAAGTTAAGGGATACAATGACAGAAAAGGAACGAGGAAAATGTCCTGGTCTTAGCTGGATTTGAGAGTTTAATGTTTGTTGGCAGGTACATTCGCTTGGTCATCATTGATCATATTTCAATAATTTACAGAAGCGAATGTCACCTTGTGAAGTTATGATTCCTTTTAAATTATGGCTATTTTCTGCTGGCTTTGAAGATGCCACCAGTGATCTTTGGATATTTACTTCAGGTACATCGATGTTGATCAAAGGTGGTAAAAAATGTAAAATAAAAAAGGTTCCGAAAGATTGGGATTATGCCATCATGCTAAGTTTGTTCAATCTTAACTTATGGTCAACTTGGTTATATCTTATAACAAACAGATTGATTATTCTTGAAGTTAGGATTGAGATTTTGTCCATCGTTTTAAGTATTTATGCTTGCACTTCGATAGAAAACTGGAGGATGTTGCTATATCTAAAAAGCAAATGACTATAGAAAGGAAGAAATAACTAATTGTCTAAAATTCAAATGTCAACAACCACTTTATTTCTGAAACTGTGAAAAGTAAGTTCTCTGTATCTTGATTGATATTGGTTAAACAAAAAAACTGTCTTTCATCTAGAGAATACTTTTTTTTTTTTTCTTTCTATAGCTGAAGATTTGAAGATTCTTTGTTCTTTCTTGCTCAGGGACCAAAAAGTTCTTATGGTTAAGACGATAACTCTTTTCGAAGTGTTGCATTTTGATTGTTGCTTTAATGCAGCATATTCAGGTTAGAAATGGCAGTTGATAATTACATTCAATTTTGATATTCATAGCCTTGTTTTGACTTTTGACATGTATCTGACAACATGTTTACCTATACGGCTATACTACAACTACAAAGAACTATGTCCAGTTTCACTAGCACACACTAAATAGTAGGTGACTATCAGAAATTTGGTTTGTTATTTTTATATATTCAAAGATTAACGAAACACTGTTCTCTTGTTTGTCGACAGATTTTTGAGTGCCTCAAAAACCACTTGCTATGTGGCTAGTGCAGGATCCCACCTCAACGTAATGGCTAAATTATGGAGTTCGTTTTTGTTGATTTCTGGGACATTATGTTGCACCAGTGGGAAATGAAATCTAAAGAAATTCCCTGGCTCTCCATGCTGCTGATTCTGTTGCAATTGGCTTCACGATATAGCACCCATTGTTTGAACTGCAAGAACTTAACCTTCCTGTTATAGTGCCATCAGAACCAGGATAGTCCACGGAAAATCTTCTCTCTTTTTCTTGCCTCTTAGCTCTCTTCCTTAGACTCTGTCTCTTCAATATGGAGGTCAATGTTGCTTTGCTACTTCTAGCATTCAGCGGCATCGGCATTGCCTCAAGACCCATCAACTTGGCTACCACTCCTGGTTTGCGCCACACAACATTCTCCCCAGCTATCGTTGATGGCAATCGTAAGGCTGTCTCCAGTGTCAAATTGAACTCATTATCATGA

mRNA sequence

ATTTAAAGGTGGAGATGGTATATGTTATGTCAATGTCAAAATATATTAAGGATGGAGAATTCAAAATTCTCTATAACGTGTAAGATACCCAAACTGTTTTGAGTAAAAAAAATCATCTTACCCTTGCAATCCAATGCCCACTCAACATACTATGATTCTTTCTTCAATTTGCATGTCATTCTTCAACTATCTTTCTTCATACACGACCAGAGTTGTACAGTGAAACATGGTTGAAAGTTAATGATCTAAAGCTTTTCATGTCGTTTAATCTCCATATCCTCACGACGGAGCTTTCCAAGAGTTTTCTAACTCTTTTACGAACAAAGGAACTGCATGCTTTTATTACCAAATCCCATCTTGCTTCCGACCCATTTTACGCAACTAGAATTGTTAAGCTCTACTCCATCAATGCTAAACTCGGTTATGCCCGCCATTTGTTTGACAAAACTCCCAACCGAAGTGTCTACCTTTGGAACTCAATCATTCGAGCTTACGCGAAAGCATATAAATTCAGGGATGCATTATCTCTGTTCCTCACAATGTCTGGAACTGAGACATCGCCCGATAACTTCACTTATTCATGCATCATAAGGGCATGCTCTGAGAATCACCATAGAGAATGGCTTAAGTTTGTTCATGGACGAGTTTTAGTAACTGGGTTTGGATTAGATCCTATTTGTTGCAGCGCTCTAGTGACTGCATACTCAAATCTGGACCTTATTGAAGAGGCCAGCAAAGTGTTTGGTAGAATACAACATCCAGACTTGGTTATGTGGAACTCAATCATTTGTGGATTTGGGTCTTGTGGGTATTGGAATCAGGGGCTTTTGTTATTTTCTAGGATGAGGAATCTGGGAGAACTTCCGGATGGATACACGGTAGTTGGTGTGGCATCGGGTATAGCAGAACCCAGCCTACTGAGCACTGGCAAAGGCATTCATGGACTTTGCCTCAAGTGTAATTTTGACTCTAATGAGCATGTAGCTAGTGCACTTGTGAGTATGTATTCGAGGTGTAATTGCATGGATTCAGCATATTTAGTATTTAGTAGTTTGTTACAGCCTGACTTAGTTACATGGTCTGCTTTAATAACTGGGTATTCTCAAGCTGGTGACTTTAGGAAAGCAATGTTGTTCTTTCAGAGACTGAATATGCAGGGTAAGAAGATGGATTCTATTTTGATTGCCAGCATTTTGGCTGCTACTGCTCAATCGACCAACATAAGGCATGGAATTGAGATACATGGTTATGTTCTTCGACAAGGGATAGAATCAAACGAGATGATATCTTCTTCTCTCATAGACATGTATTCCAAGTGTGGTTATTTGAGTTTAGGAATTCGTGTTTTTCACGTTATGTCACAAAAAAATATCTCGACATACAATTCTGTAATATGGGGACTTGGTTTGCATGGACTTGCATCAAAGGCATTGGAGATGTTTGAAGAGTTGTTGACCATTGGTTTAGTGCCTAATGAGTCCACTTTCTCTGCTCTCCTCTTTGCGTGCTGCCATGCTGGTCTTAACTCTGTTGGCAAGGAGATTTTCAAACGAATGAAAGATGAGTTTTGCATCAAATACAAAACAGAGCATTACGTTTACATTGTAAAACTTCTTGGAATGACTGGGAATTAGAAGTGGCTTACAATCTTGTCATGTCCTTACCAGAGCCTGCAGACTCTGGAATTTGGGGAGCTCTACTCTCTTGCTGTGATGCTTGTGGGAACGTTGAACTGGCTGAAGTTGTTGCTCAACGGCTCATAGAAAATGATCCTGAAAAAACTGTTTATAAAGTAATGCTCTCTAATATTTATGCTGGAGATGGGAGATGGGATGATGTGAAGAAGTTAAGGGATACAATGACAGAAAAGGAACGAGGAAAATGTCCTGGTCTTAGCTGGATTTGAGAGTTTAATGTTTGTTGGCAGGGACCAAAAAGTTCTTATGGTTAAGACGATAACTCTTTTCGAAGTGTTGCATTTTGATTGTTGCTTTAATGCAGCATATTCAGCTCTCTTCCTTAGACTCTGTCTCTTCAATATGGAGGTCAATGTTGCTTTGCTACTTCTAGCATTCAGCGGCATCGGCATTGCCTCAAGACCCATCAACTTGGCTACCACTCCTGGTTTGCGCCACACAACATTCTCCCCAGCTATCGTTGATGGCAATCGTAAGGCTGTCTCCAGTGTCAAATTGAACTCATTATCATGA

Coding sequence (CDS)

ATGTTTGTTGGCAGGGACCAAAAAGTTCTTATGGTTAAGACGATAACTCTTTTCGAAGTGTTGCATTTTGATTGTTGCTTTAATGCAGCATATTCAGCTCTCTTCCTTAGACTCTGTCTCTTCAATATGGAGGTCAATGTTGCTTTGCTACTTCTAGCATTCAGCGGCATCGGCATTGCCTCAAGACCCATCAACTTGGCTACCACTCCTGGTTTGCGCCACACAACATTCTCCCCAGCTATCGTTGATGGCAATCGTAAGGCTGTCTCCAGTGTCAAATTGAACTCATTATCATGA

Protein sequence

MFVGRDQKVLMVKTITLFEVLHFDCCFNAAYSALFLRLCLFNMEVNVALLLLAFSGIGIASRPINLATTPGLRHTTFSPAIVDGNRKAVSSVKLNSLS
Homology
[Close]
BLAST of CsGy1G001140 vs. NCBI nr
Match: KGN63549.1 (hypothetical protein Csa_1G004150 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 2  FVGRDQKVLMVKTITLFEVLHFDCCFNAAYS 33
          F+ RDQKVLMVKTITLFEVLHFDCCFNAAYS
Sbjct: 41 FLLRDQKVLMVKTITLFEVLHFDCCFNAAYS 71

[Close]
BLAST of CsGy1G001140 vs. TrEMBL
Match: tr|A0A0A0LRE9|A0A0A0LRE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004150 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-07
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 2  FVGRDQKVLMVKTITLFEVLHFDCCFNAAYS 33
          F+ RDQKVLMVKTITLFEVLHFDCCFNAAYS
Sbjct: 41 FLLRDQKVLMVKTITLFEVLHFDCCFNAAYS 71

The following BLAST results are available for this feature:
BLAST of CsGy1G001140 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63549.15.8e-0793.55hypothetical protein Csa_1G004150 [Cucumis sativus][more]
BLAST of CsGy1G001140 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G001140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G001140 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRE9|A0A0A0LRE9_CUCSA3.9e-0793.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004150 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G001140.1CsGy1G001140.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G001140Csa1G004150Cucumber (Chinese Long) v2cgybcuB001
CsGy1G001140MELO3C029767.2Melon (DHL92) v3.6.1cgybmedB043
CsGy1G001140CsaV3_1G001210Cucumber (Chinese Long) v3cgybcucB002
CsGy1G001140Bhi02G000379Wax gourdcgybwgoB092
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G001140Wild cucumber (PI 183967)cgybcpiB001
CsGy1G001140Wild cucumber (PI 183967)cgybcpiB033
CsGy1G001140Silver-seed gourdcarcgybB0371
CsGy1G001140Silver-seed gourdcarcgybB0374
CsGy1G001140Silver-seed gourdcarcgybB0442
CsGy1G001140Silver-seed gourdcarcgybB1031
CsGy1G001140Cucumber (Chinese Long) v3cgybcucB009
CsGy1G001140Watermelon (97103) v2cgybwmbB076
CsGy1G001140Watermelon (97103) v2cgybwmbB087
CsGy1G001140Wax gourdcgybwgoB008
CsGy1G001140Wax gourdcgybwgoB054
CsGy1G001140Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G001140Cucurbita maxima (Rimu)cgybcmaB028
CsGy1G001140Cucurbita maxima (Rimu)cgybcmaB045
CsGy1G001140Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G001140Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G001140Cucurbita moschata (Rifu)cgybcmoB032
CsGy1G001140Cucurbita moschata (Rifu)cgybcmoB078
CsGy1G001140Cucurbita moschata (Rifu)cgybcmoB121
CsGy1G001140Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G001140Cucurbita pepo (Zucchini)cgybcpeB062
CsGy1G001140Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G001140Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G001140Melon (DHL92) v3.5.1cgybmeB048
CsGy1G001140Melon (DHL92) v3.6.1cgybmedB013
CsGy1G001140Watermelon (Charleston Gray)cgybwcgB002
CsGy1G001140Watermelon (Charleston Gray)cgybwcgB078
CsGy1G001140Watermelon (Charleston Gray)cgybwcgB086
CsGy1G001140Watermelon (97103) v1cgybwmB003
CsGy1G001140Watermelon (97103) v1cgybwmB094