CsGy1G000310 (gene) Cucumber (Gy14) v2

NameCsGy1G000310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr1 : 160049 .. 163281 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATGATCTATAGACCATTCTTGTTGGTTTAGTCAACAATATTTATTATAATAATACTAAATAAATAAATTTAGAGAGAAAGGGTCCAATCCATATTATCCACCTACCTAGCATTAGTTTAATTAATATATTTTATTTAAAAAATTTAATTTTCTTGGTAACTAATTGTTGTAAGATCACATGGGAACCTAATTAAATTTGTAGAGGAACTTGCAATTGGTCATTTTCACTAAAATGTGAGGAGGTGATCAAATGTGGTACAATAAGGAATTAAATTAGTTAAAACTTAAAGATGCTTTCTCGGTCTTTGTCCATTGTGATCATTCACTAATAAATAAATTATATAGCCTCGGGAATGTATCTTAATTAGGAACACTATATATATTCTGTTATATATATTCATGATTAATTATCTTCATATTATAATCATTGATTTAATTAGACTCCACCAATCTTATGTACGCTTTATCCAATACTTGGTGTGTATAGATATGCATACATATATGTCCAAGGAAAGGGCATAAAGTTCACATACGAGATTGAAATGAGGCATTGGAAGCCAACCTATATTCCAAAAAGAAAATCTCAATGCCTTGAGATTTGGACCAACCAAACTCGGTCGGGTCGATAAATATATATCAATCAACCATAAACCAAAAAATTCGAACATGCATATCTTGCCTACCTTGAGCACTAGAAATGTCGACACAGTGTGTTACAGATGCAATCGAAGACATATATTTATAATGACAAACTTATAAATAATCGCATTTGACCACTCTACGAGAAAGAGATCTGACGACTTGTATTTCATTTTTATTTAGTTGAATTAGTCGTTCGTTAAATTGTACTAATTTAGGTATCAAAATGTAAAACTAATCTCTTACATACTGTAACTTTAGAGCATCTTAAGACTAGACTAGGAAGAAGTAAAGTTGAATTACGTCAAAGGCCAATGCAAACCTGCAACGAATCCCAATGGTAACGGTATCATGCAAAGCACCGATAATAATGTCAATTCGAAATCCAATGCATCCAACGTATACTAATGGTGTGTTGGATGTATATACCAAATTAATTTGGTATCAATAATAGTGAAGATTTCAAGAGTTGTCCTGTAGTATACTAATGTGCTGACAATCAAGCCTAAGCTAGTAATAATTAAACCCAACCAGCTACAAAAGTTGGCCATACGTCTCCATATATACTCTTTAGATTTTCACGATCGACTCCTATAATAAATATGATGATCATTTGATCCATCACGTGAGTGATGTCATACCGTACCTCTTATGGTTGACCATATAGATTAATGTAACCTCTCATTTAAAAATTTAATATTATATTATCTAACATTAGTCAAATATAACTAAACTTCTTTTGTCTCTATAGGACATTAATTAGCACAAAAGAGTAAATGCAAGAAGAAAAGATCTAGTAATAGTTAGAGGTTAATTAAAAATGCAAAATTTGAAACTAGAGACTAATTAAATTGAACTAAGTAGAATTATAATATTTTGAAATGAATGGTAAAATAGGTAGGTAGGGAAGAAAAATACATAAGAAAAAGAAAATTAATGATGATCTAATTCAGCTATATGGTTATGATTATAGTTCTCACCAACTTTTAGAGGTTTTCATTTTAAAATTTAATTTTGGGGAGTTGGCCTGAGGAAGAAGAAGGAGAATATAATATAAGGTCAATAGTTGTTTCTTTTTCTCTTTCTTTTTCTAAACACTAATATATAGTTAAATGGATTGGGTACTATCAGGTACATACAAATTGAAAAAAAAAAAAAGAAAAAAAGATGGGCTGATTAATTTGGTAGGAGGCATTTAATAAATTTTGTTTGTTTTAGTTGAAGGAAAAAGAGAAATGAGTGAGTGTGATATAATTATTTATATATATATATAGATGAATTAGAAATATTCTTTGAACCAATCAATATCAAAACTGGTAGCCTTAGCTGTATATCCCTTGTTTGAGTTAATGCCATTGAATTTCCCCCTTGAATCTTCCAAACTCCATTAGTACTAAAAACACAATTTGGCAAAAAGGATGTTTGTTTTTGGAATTTGTACTGCCACACCCCATTATTAATTTTTGCCAAACTCCATTTTTGCCGTAATTGAGCACCTAATCTCTGGTATTAATCCTCACCTTTTTTTCATCATCTATATGTTCTTCCTATAAGTCATTATATTCATTACGTACTTAAAAGACTAATTTTGTGTGGTTCACAATCAATAATATTACTGCACCTTCCCTTATTCCACAACACACACACCAATAATAATAACAATAATCATGCACACACACACACACACACACATATATATAACAATCATCAACTTGAAGTTTGGCGTTATTTGTGAATTTTAATTTAATTTACTAATTTCTAAACTACAAAGATCATTTTACTATATATGTACAATAGCTTAATTATGTTTATAGGTAATAATAGTATAATGAAAGTTTGACTGGGAGAAGAAGTGTTAATTTGAGTTGTTTGTTATTAATTAATAATTAGAGAGAGGTAAATTAATATAGATATATGAAAGGGGCACGTGAGAATGAATGGAATAACAATGATGATGATGTGTGGAATGTAAAAAAGAATAGAGGGGGAGTATATAACTATGTTAAGAAGTCAACTAGGAGTAGAAAAGGTATGGATTTTTGGAGGAGGTAAAGAATTTATAAGAATTATGTGCAAGAATATGATGATAATGATGAGGGGTAAGGGTTGGGAAATGGGTTTTGCACCGTCTGATTGGGTTAAAAATGTGATGGGGATCAGCACATGAAGTGCGATTACACATCAAAAGCCCCTTCCCACAGAATCTCTGGTAAATCTTGTTGGATCAATCCAAGATGCGAACTCCCCAAGTTGAGCAAGTGGCCATATATATATATATTATATATATATATATATATTTCTCTCTTTTTAAAATATCTACTCATCCCCCCATTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTGTGTTTAATTTGAAACAATTCCCTTCCAGTTACATCAGAATTATTAATATGATTCCAGTTCAGTAATTAGTATAGAGAGTTGATTAAGTGGTGTTCCCAATCACACGCAATTCAAGTCAGCTAATCAAAATGAATGTATATAATTGATTAATTAATTTTGAAATGAAAAAACTTTATAATAGGGGGTTTGCTTGTAACGGACTCTCATCTCTCGGCTAG

mRNA sequence

ATGTATATGATCTATAGACCATTCTTAGGAACTTGCAATTGGTCATTTTCACTAAAATGTGAGGAGATTTTCACGATCGACTCCTATAATAAATATGATGATCATTTGATCCATCACGTGAGTGATGTCATACCGTACCTCTTATGGACATTAATTAGCACAAAAGAATATATGAAAGGGGCACGTGAGAATGAATGGAATAACAATGATGATGATGTGTGGAATCACATGAAGTGCGATTACACATCAAAAGCCCCTTCCCACAGAATCTCTGGTAAATCTTGTTGGATCAATCCAAGATGCGAACTCCCCAATTACATCAGAATTATTAATATGATTCCAGTTCAGGGGTTTGCTTGTAACGGACTCTCATCTCTCGGCTAG

Coding sequence (CDS)

ATGTATATGATCTATAGACCATTCTTAGGAACTTGCAATTGGTCATTTTCACTAAAATGTGAGGAGATTTTCACGATCGACTCCTATAATAAATATGATGATCATTTGATCCATCACGTGAGTGATGTCATACCGTACCTCTTATGGACATTAATTAGCACAAAAGAATATATGAAAGGGGCACGTGAGAATGAATGGAATAACAATGATGATGATGTGTGGAATCACATGAAGTGCGATTACACATCAAAAGCCCCTTCCCACAGAATCTCTGGTAAATCTTGTTGGATCAATCCAAGATGCGAACTCCCCAATTACATCAGAATTATTAATATGATTCCAGTTCAGGGGTTTGCTTGTAACGGACTCTCATCTCTCGGCTAG

Protein sequence

MYMIYRPFLGTCNWSFSLKCEEIFTIDSYNKYDDHLIHHVSDVIPYLLWTLISTKEYMKGARENEWNNNDDDVWNHMKCDYTSKAPSHRISGKSCWINPRCELPNYIRIINMIPVQGFACNGLSSLG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G000310.1CsGy1G000310.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILYSSF140924Duffy binding domain-likecoord: 51..106

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G000310Melon (DHL92) v3.6.1cgybmedB043
CsGy1G000310Cucumber (Gy14) v2cgybcgybB005
CsGy1G000310Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G000310Cucurbita maxima (Rimu)cgybcmaB028
CsGy1G000310Cucurbita maxima (Rimu)cgybcmaB045
CsGy1G000310Cucurbita maxima (Rimu)cgybcmaB081
CsGy1G000310Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G000310Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G000310Cucurbita moschata (Rifu)cgybcmoB032
CsGy1G000310Cucurbita moschata (Rifu)cgybcmoB076
CsGy1G000310Cucurbita moschata (Rifu)cgybcmoB097
CsGy1G000310Cucurbita pepo (Zucchini)cgybcpeB015
CsGy1G000310Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G000310Cucurbita pepo (Zucchini)cgybcpeB078
CsGy1G000310Cucurbita pepo (Zucchini)cgybcpeB117
CsGy1G000310Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G000310Cucumber (Chinese Long) v2cgybcuB001
CsGy1G000310Cucumber (Chinese Long) v2cgybcuB012
CsGy1G000310Bottle gourd (USVL1VR-Ls)cgyblsiB035
CsGy1G000310Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G000310Melon (DHL92) v3.5.1cgybmeB020
CsGy1G000310Melon (DHL92) v3.5.1cgybmeB048
CsGy1G000310Melon (DHL92) v3.6.1cgybmedB017
CsGy1G000310Watermelon (Charleston Gray)cgybwcgB048
CsGy1G000310Watermelon (Charleston Gray)cgybwcgB078
CsGy1G000310Watermelon (97103) v1cgybwmB028
CsGy1G000310Watermelon (97103) v1cgybwmB094
CsGy1G000310Wild cucumber (PI 183967)cgybcpiB001
CsGy1G000310Wild cucumber (PI 183967)cgybcpiB012
CsGy1G000310Silver-seed gourdcarcgybB0371
CsGy1G000310Silver-seed gourdcarcgybB0608
CsGy1G000310Cucumber (Chinese Long) v3cgybcucB002
CsGy1G000310Cucumber (Chinese Long) v3cgybcucB011
CsGy1G000310Watermelon (97103) v2cgybwmbB076
CsGy1G000310Watermelon (97103) v2cgybwmbB048
CsGy1G000310Wax gourdcgybwgoB060
CsGy1G000310Wax gourdcgybwgoB077