Cp4.1LG20g05170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g05170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionJasmonate zim-domain protein
LocationCp4.1LG20 : 3075573 .. 3076507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGGTCCTTAGGTTGGCGTCCATGTCGTAAGCATTTCAAACGTGCGTAATTCTGCTTTTTCTTCTACACGCATACATATAAATAAACATTCATTCTTTGCCGGATTCTTCCATTTCTGTGTGCAAAATCTCATCTTTTTCTCCGATTCGAATTACCCACCGGCGAAATCTGATTCTTTTTCATCTGGGTCTCTCTGTTTCTCTCAATTCTTCTCCGATTGCTCTGTTTTAATGGCGGTTCTTCCCATTTCCATGGAGCAAAGCTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAATTCTTGTAAGTTTCTGTTTCTTATCATCTCTGTTTCTCTTTGAATGTTTGTATGTCTGTGAAAGTGTATTGATTTTGGGTTGTTCTTTATGGCAGGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACCATTTTCTACAATGGGAGAGTTTGTGTTGGGGATTTTACAGAGGATCAGGCTAGAGCTATAATAATGCTTGCAACAAGACATGTAGAGGAGCGATCGGTTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCCGAGCGGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTGCAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAGCCTTCCATTGCTCCACTTTCTTTCTTTCTTTTTATTGGTTTTTTTTCCCTTCAGATGATTGAATATGTAACGATGTTTAGAGATGTAATTTGTAGAGAACTTACTTTTTTGGAGTTTCTTTAATGAAAAATTGGAAAAAAAAAATCATTTTTTGATATCTGGGTTGTTTAGATCTGCCTCCAAACTCAAGATCT

mRNA sequence

TTTGGTCCTTAGGTTGGCGTCCATGTCGTAAGCATTTCAAACGTGCGTAATTCTGCTTTTTCTTCTACACGCATACATATAAATAAACATTCATTCTTTGCCGGATTCTTCCATTTCTGTGTGCAAAATCTCATCTTTTTCTCCGATTCGAATTACCCACCGGCGAAATCTGATTCTTTTTCATCTGGGTCTCTCTGTTTCTCTCAATTCTTCTCCGATTGCTCTGTTTTAATGGCGGTTCTTCCCATTTCCATGGAGCAAAGCTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAATTCTTGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACCATTTTCTACAATGGGAGAGTTTGTGTTGGGGATTTTACAGAGGATCAGGCTAGAGCTATAATAATGCTTGCAACAAGACATGTAGAGGAGCGATCGGTTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCCGAGCGGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTGCAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAGCCTTCCATTGCTCCACTTTCTTTCTTTCTTTTTATTGGTTTTTTTTCCCTTCAGATGATTGAATATGTAACGATGTTTAGAGATGTAATTTGTAGAGAACTTACTTTTTTGGAGTTTCTTTAATGAAAAATTGGAAAAAAAAAATCATTTTTTGATATCTGGGTTGTTTAGATCTGCCTCCAAACTCAAGATCT

Coding sequence (CDS)

ATGGCGGTTCTTCCCATTTCCATGGAGCAAAGCTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAATTCTTGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACCATTTTCTACAATGGGAGAGTTTGTGTTGGGGATTTTACAGAGGATCAGGCTAGAGCTATAATAATGCTTGCAACAAGACATGTAGAGGAGCGATCGGTTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCCGAGCGGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTGCAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAG

Protein sequence

MAVLPISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSLQRFLQKRKNRVQSASPYNH
Homology
[Close]
BLAST of Cp4.1LG20g05170 vs. Swiss-Prot
Match: TIF5B_ARATH (Protein TIFY 5B OS=Arabidopsis thaliana GN=TIFY 5B PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-12
Identity = 55/140 (39.29%), Postives = 71/140 (50.71%), Query Frame = 1 

Query: 6   ISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESS------KNSQQQMTIFY 65
           + M+  C+LELRL  S+  SD             H  LD+ SS      K   Q +TIFY
Sbjct: 18  MEMQTKCDLELRLLTSSYDSD------------FHSSLDESSSSEISQPKQESQILTIFY 77

Query: 66  NGRVCVG-DFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKR 125
           NG +CV  D T  +A AI+ LA+R VEE+S++ R            N         SMKR
Sbjct: 78  NGHMCVSSDLTHLEANAILSLASRDVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASMKR 137

Query: 126 SLQRFLQKRKNRVQSASPYN 139
           SL  FLQKR  R+Q+ SPY+
Sbjct: 138 SLHSFLQKRSLRIQATSPYH 145

[Close]
BLAST of Cp4.1LG20g05170 vs. Swiss-Prot
Match: TIF5A_ARATH (Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.3e-11
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 6   ISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQ-----QQMTIFYN 65
           + ++Q+C+LELRL P TS+ D DS D           ++  SS N Q     Q++TIFYN
Sbjct: 1   MKLQQNCDLELRLFP-TSY-DSDSSDTT-------SVVESTSSGNPQPNEESQRITIFYN 60

Query: 66  GRVCVG-DFTEDQARAIIMLATRHVEERS-------VNRRRKLERSMSPERCNGEGGSGS 125
           G++C   D T  QAR+II +A+R ++ +S        N+      +  P           
Sbjct: 61  GKMCFSSDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLP---------NP 120

Query: 126 GLSMKRSLQRFLQKRKNRVQSASPYN 139
             SMK+SLQ FLQKRK R+Q+ SPY+
Sbjct: 121 KASMKKSLQSFLQKRKIRIQATSPYH 128

[Close]
BLAST of Cp4.1LG20g05170 vs. Swiss-Prot
Match: TIF9_ORYSI (Protein TIFY 9 OS=Oryza sativa subsp. indica GN=TIFY9 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.0e-06
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 55  MTIFYNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGL 114
           MT+FYNG V V D + D+A AI+ +AT   + + + R   +  + + E           L
Sbjct: 87  MTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKE----------PL 146

Query: 115 SMKRSLQRFLQKRKNRVQSASPY 138
           +  +SLQRFL KRK R+ S  PY
Sbjct: 147 TRTKSLQRFLSKRKERLTSLGPY 159

[Close]
BLAST of Cp4.1LG20g05170 vs. Swiss-Prot
Match: TIF9_ORYSJ (Protein TIFY 9 OS=Oryza sativa subsp. japonica GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.0e-06
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 55  MTIFYNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGL 114
           MT+FYNG V V D + D+A AI+ +AT   + + + R   +  + + E           L
Sbjct: 87  MTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKE----------PL 146

Query: 115 SMKRSLQRFLQKRKNRVQSASPY 138
           +  +SLQRFL KRK R+ S  PY
Sbjct: 147 TRTKSLQRFLSKRKERLTSLGPY 159

[Close]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match: A0A0A0LXJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435720 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.5e-43
Identity = 101/150 (67.33%), Postives = 115/150 (76.67%), Query Frame = 1 

Query: 1   MAVLPISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDD--ESSKNSQQQMTIF 60
           MA+LP+S++ +CNLELRLSPS+S        H HH P LH FLDD  E +KNS QQMTIF
Sbjct: 1   MALLPVSIDHNCNLELRLSPSSSTFLSHPLPHSHHHPPLHHFLDDDDECNKNSHQQMTIF 60

Query: 61  YNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLER-SMSPERCNGE--------GG 120
           YNGRVCV DFTEDQA+AIIMLA+R VE+RS N   KLER S SP++C+ E         G
Sbjct: 61  YNGRVCVADFTEDQAKAIIMLASRQVEDRSTNPEHKLERPSTSPDQCHREPVSLSVSGSG 120

Query: 121 SGSGLSMKRSLQRFLQKRKNRVQSASPYNH 140
           SGSGLSMKRSLQRFLQKRKNR+QSASPYNH
Sbjct: 121 SGSGLSMKRSLQRFLQKRKNRIQSASPYNH 150

[Close]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match: A0A067L1K4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04632 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-20
Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVGD 67
           M ++CNLELRL P +   D    D+RHHQP +    +   S   +QQ+TIFYNG VCV D
Sbjct: 1   MRRNCNLELRLVPFSDI-DHHHRDNRHHQP-ISTEKEGSESPQQKQQLTIFYNGSVCVCD 60

Query: 68  FTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGS----------GSGLSMK 127
            TE QARAI++LA+R +EE       KL+  +    C+ E  S           +GLSMK
Sbjct: 61  VTELQARAILLLASREMEE-------KLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMK 120

Query: 128 RSLQRFLQKRKNRVQSASPYNH 140
           RS+QRFLQKR +R+ + SPYNH
Sbjct: 121 RSIQRFLQKRNHRIHATSPYNH 133

[Close]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match: A0A061GKU8_THECC (Jasmonate-zim-domain protein 8, putative OS=Theobroma cacao GN=TCM_029461 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-20
Identity = 66/133 (49.62%), Postives = 83/133 (62.41%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDD--ESSKNSQQQMTIFYNGRVCV 67
           M ++CNLELRL PS+      SG H       H  +++  ES +N QQQ+TIFYNGRVCV
Sbjct: 1   MRRNCNLELRLLPSSY-----SGGH-------HDMMEESSESPQNQQQQLTIFYNGRVCV 60

Query: 68  GDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSLQRFLQ 127
            D TE QARAI+MLA R  +ER            SP   +      +G++MKRSLQRFLQ
Sbjct: 61  CDVTELQARAILMLANRETDERITTPTGSGSVPASPTLQSQLYSPNTGMTMKRSLQRFLQ 120

Query: 128 KRKNRVQSASPYN 139
           KRKNR+Q+ SPY+
Sbjct: 121 KRKNRIQATSPYH 121

[Close]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match: A0A0B4RUY2_HEVBR (JAZ8 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-19
Identity = 71/139 (51.08%), Postives = 86/139 (61.87%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQF-LDDESSKNSQQQMTIFYNGRVCVG 67
           M ++CNLEL+L P   FSD D     HH P L +    DE S    QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELQLFP---FSDPD-----HHPPVLEEKETSDEQSPQHSQQLTIFYNGRVCVC 60

Query: 68  DFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGS------GSGLSMKRSL 127
           D TE QARAI++LA+R +EE   N R  +      E  +    S       +GLSMKRS+
Sbjct: 61  DVTELQARAILLLASREMEE---NLRTPVGTPTGSEVASPSLQSPLCTPMAAGLSMKRSI 120

Query: 128 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRK+RVQ+ SPYNH
Sbjct: 121 QRFLQKRKHRVQAISPYNH 128

[Close]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match: A5AT04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03790 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-19
Identity = 63/129 (48.84%), Postives = 84/129 (65.12%), Query Frame = 1 

Query: 10  QSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVGDFT 69
           ++CNLELRL P  +  D  S  H HH   +         +  QQQ+TIFYNGR+CV D T
Sbjct: 4   RNCNLELRLLPPNT--DYSSPQH-HHNMMMETGRGSPQEQQQQQQLTIFYNGRICVCDVT 63

Query: 70  EDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSLQRFLQKRKN 129
           E QARAI++LA+R +EE++  R      + SP   + +  S +GLSMKRSLQRFLQKRKN
Sbjct: 64  ELQARAILLLASREMEEKT--RTPTASDATSPS-LHSQLYSATGLSMKRSLQRFLQKRKN 123

Query: 130 RVQSASPYN 139
           R+++ SPY+
Sbjct: 124 RMEATSPYH 126

[Close]
BLAST of Cp4.1LG20g05170 vs. TAIR10
Match: AT2G34600.1 (AT2G34600.1 jasmonate-zim-domain protein 7)

HSP 1 Score: 72.0 bits (175), Expect = 3.2e-13
Identity = 55/140 (39.29%), Postives = 71/140 (50.71%), Query Frame = 1 

Query: 6   ISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESS------KNSQQQMTIFY 65
           + M+  C+LELRL  S+  SD             H  LD+ SS      K   Q +TIFY
Sbjct: 18  MEMQTKCDLELRLLTSSYDSD------------FHSSLDESSSSEISQPKQESQILTIFY 77

Query: 66  NGRVCVG-DFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKR 125
           NG +CV  D T  +A AI+ LA+R VEE+S++ R            N         SMKR
Sbjct: 78  NGHMCVSSDLTHLEANAILSLASRDVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASMKR 137

Query: 126 SLQRFLQKRKNRVQSASPYN 139
           SL  FLQKR  R+Q+ SPY+
Sbjct: 138 SLHSFLQKRSLRIQATSPYH 145

[Close]
BLAST of Cp4.1LG20g05170 vs. TAIR10
Match: AT1G30135.1 (AT1G30135.1 jasmonate-zim-domain protein 8)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-12
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 6   ISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQ-----QQMTIFYN 65
           + ++Q+C+LELRL P TS+ D DS D           ++  SS N Q     Q++TIFYN
Sbjct: 1   MKLQQNCDLELRLFP-TSY-DSDSSDTT-------SVVESTSSGNPQPNEESQRITIFYN 60

Query: 66  GRVCVG-DFTEDQARAIIMLATRHVEERS-------VNRRRKLERSMSPERCNGEGGSGS 125
           G++C   D T  QAR+II +A+R ++ +S        N+      +  P           
Sbjct: 61  GKMCFSSDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLP---------NP 120

Query: 126 GLSMKRSLQRFLQKRKNRVQSASPYN 139
             SMK+SLQ FLQKRK R+Q+ SPY+
Sbjct: 121 KASMKKSLQSFLQKRKIRIQATSPYH 128

[Close]
BLAST of Cp4.1LG20g05170 vs. TAIR10
Match: AT3G22275.1 (AT3G22275.1 unknown protein)

HSP 1 Score: 47.4 bits (111), Expect = 8.5e-06
Identity = 40/124 (32.26%), Postives = 61/124 (49.19%), Query Frame = 1 

Query: 10  QSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVGDFT 69
           + C+L+L LSP  S       D           ++D SS    +++  FY+GR+   D  
Sbjct: 2   KGCSLDLHLSPMASTLQSCHQDST---------VNDRSSTIRSKEINAFYSGRLSEYDLV 61

Query: 70  EDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSLQRFLQKRKN 129
           E Q RAII +A++  E  ++         + P R      S  G S+KRS++RFL+KRK 
Sbjct: 62  EIQMRAIIEMASKDREVTALE--------LVPVRLE----SPLGCSVKRSVKRFLEKRKK 104

Query: 130 RVQS 134
           R +S
Sbjct: 122 RSKS 104

[Close]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match: gi|778660933|ref|XP_011657199.1| (PREDICTED: protein TIFY 5A-like [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42
Identity = 101/150 (67.33%), Postives = 115/150 (76.67%), Query Frame = 1 

Query: 1   MAVLPISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDD--ESSKNSQQQMTIF 60
           MA+LP+S++ +CNLELRLSPS+S        H HH P LH FLDD  E +KNS QQMTIF
Sbjct: 1   MALLPVSIDHNCNLELRLSPSSSTFLSHPLPHSHHHPPLHHFLDDDDECNKNSHQQMTIF 60

Query: 61  YNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLER-SMSPERCNGE--------GG 120
           YNGRVCV DFTEDQA+AIIMLA+R VE+RS N   KLER S SP++C+ E         G
Sbjct: 61  YNGRVCVADFTEDQAKAIIMLASRQVEDRSTNPEHKLERPSTSPDQCHREPVSLSVSGSG 120

Query: 121 SGSGLSMKRSLQRFLQKRKNRVQSASPYNH 140
           SGSGLSMKRSLQRFLQKRKNR+QSASPYNH
Sbjct: 121 SGSGLSMKRSLQRFLQKRKNRIQSASPYNH 150

[Close]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match: gi|802596215|ref|XP_012072123.1| (PREDICTED: protein TIFY 5A-like [Jatropha curcas])

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20
Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVGD 67
           M ++CNLELRL P +   D    D+RHHQP +    +   S   +QQ+TIFYNG VCV D
Sbjct: 1   MRRNCNLELRLVPFSDI-DHHHRDNRHHQP-ISTEKEGSESPQQKQQLTIFYNGSVCVCD 60

Query: 68  FTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGS----------GSGLSMK 127
            TE QARAI++LA+R +EE       KL+  +    C+ E  S           +GLSMK
Sbjct: 61  VTELQARAILLLASREMEE-------KLKSPVGTPTCSSETASQKLPSQLCRPSAGLSMK 120

Query: 128 RSLQRFLQKRKNRVQSASPYNH 140
           RS+QRFLQKR +R+ + SPYNH
Sbjct: 121 RSIQRFLQKRNHRIHATSPYNH 133

[Close]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match: gi|590622444|ref|XP_007025052.1| (Jasmonate-zim-domain protein 8, putative [Theobroma cacao])

HSP 1 Score: 105.5 bits (262), Expect = 7.5e-20
Identity = 66/133 (49.62%), Postives = 83/133 (62.41%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDD--ESSKNSQQQMTIFYNGRVCV 67
           M ++CNLELRL PS+      SG H       H  +++  ES +N QQQ+TIFYNGRVCV
Sbjct: 1   MRRNCNLELRLLPSSY-----SGGH-------HDMMEESSESPQNQQQQLTIFYNGRVCV 60

Query: 68  GDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSLQRFLQ 127
            D TE QARAI+MLA R  +ER            SP   +      +G++MKRSLQRFLQ
Sbjct: 61  CDVTELQARAILMLANRETDERITTPTGSGSVPASPTLQSQLYSPNTGMTMKRSLQRFLQ 120

Query: 128 KRKNRVQSASPYN 139
           KRKNR+Q+ SPY+
Sbjct: 121 KRKNRIQATSPYH 121

[Close]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match: gi|724086337|gb|AIY25009.1| (JAZ8 [Hevea brasiliensis])

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19
Identity = 71/139 (51.08%), Postives = 86/139 (61.87%), Query Frame = 1 

Query: 8   MEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQF-LDDESSKNSQQQMTIFYNGRVCVG 67
           M ++CNLEL+L P   FSD D     HH P L +    DE S    QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELQLFP---FSDPD-----HHPPVLEEKETSDEQSPQHSQQLTIFYNGRVCVC 60

Query: 68  DFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGS------GSGLSMKRSL 127
           D TE QARAI++LA+R +EE   N R  +      E  +    S       +GLSMKRS+
Sbjct: 61  DVTELQARAILLLASREMEE---NLRTPVGTPTGSEVASPSLQSPLCTPMAAGLSMKRSI 120

Query: 128 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRK+RVQ+ SPYNH
Sbjct: 121 QRFLQKRKHRVQAISPYNH 128

[Close]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match: gi|720089348|ref|XP_010244732.1| (PREDICTED: protein TIFY 5A-like [Nelumbo nucifera])

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19
Identity = 71/142 (50.00%), Postives = 83/142 (58.45%), Query Frame = 1 

Query: 2   AVLPISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRL-----HQFLDDESSKNSQQQMT 61
           + LP++M +SCNL+L L P  S    DSG               Q       +  QQQ+T
Sbjct: 4   STLPLAMRRSCNLDLCLFPIGSLPSNDSGSGSSSSGEPIKTPEQQQQQQAQQQQQQQQLT 63

Query: 62  IFYNGRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLERSM-SPERCNGEGGSGSGLS 121
           IFYNGRVCV D TE QARAII +A R +EER    R  L  S+ SP +      S  GLS
Sbjct: 64  IFYNGRVCVCDVTEFQARAIIWIARREMEERLSTPRSPLSPSLQSPLQ------SPPGLS 123

Query: 122 MKRSLQRFLQKRKNRVQSASPY 138
           MKRSLQRFLQKRKNR+Q ASPY
Sbjct: 124 MKRSLQRFLQKRKNRMQDASPY 139

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g05170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIF5B_ARATH5.7e-1239.29Protein TIFY 5B OS=Arabidopsis thaliana GN=TIFY 5B PE=2 SV=1[more]
TIF5A_ARATH6.3e-1137.67Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1[more]
TIF9_ORYSI8.0e-0637.35Protein TIFY 9 OS=Oryza sativa subsp. indica GN=TIFY9 PE=3 SV=1[more]
TIF9_ORYSJ8.0e-0637.35Protein TIFY 9 OS=Oryza sativa subsp. japonica GN=TIFY9 PE=1 SV=1[more]
BLAST of Cp4.1LG20g05170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXJ5_CUCSA7.5e-4367.33Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435720 PE=4 SV=1[more]
A0A067L1K4_JATCU1.8e-2046.48Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04632 PE=4 SV=1[more]
A0A061GKU8_THECC5.2e-2049.62Jasmonate-zim-domain protein 8, putative OS=Theobroma cacao GN=TCM_029461 PE=4 S... [more]
A0A0B4RUY2_HEVBR1.2e-1951.08JAZ8 OS=Hevea brasiliensis PE=2 SV=1[more]
A5AT04_VITVI9.8e-1948.84Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03790 PE=4 SV=... [more]
BLAST of Cp4.1LG20g05170 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34600.13.2e-1339.29 jasmonate-zim-domain protein 7[more]
AT1G30135.13.6e-1237.67 jasmonate-zim-domain protein 8[more]
AT3G22275.18.5e-0632.26 unknown protein[more]
BLAST of Cp4.1LG20g05170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778660933|ref|XP_011657199.1|1.1e-4267.33PREDICTED: protein TIFY 5A-like [Cucumis sativus][more]
gi|802596215|ref|XP_012072123.1|2.6e-2046.48PREDICTED: protein TIFY 5A-like [Jatropha curcas][more]
gi|590622444|ref|XP_007025052.1|7.5e-2049.62Jasmonate-zim-domain protein 8, putative [Theobroma cacao][more]
gi|724086337|gb|AIY25009.1|1.7e-1951.08JAZ8 [Hevea brasiliensis][more]
gi|720089348|ref|XP_010244732.1|1.7e-1950.00PREDICTED: protein TIFY 5A-like [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018467CCT_CS
IPR010399Tify_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g05170.1Cp4.1LG20g05170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010399Tify domainPFAMPF06200tifycoord: 51..80
score: 2.5
IPR010399Tify domainSMARTSM00979tify_2coord: 48..82
score: 6.
IPR010399Tify domainPROFILEPS51320TIFYcoord: 48..82
score: 12
IPR018467CO/COL/TOC1, conserved sitePFAMPF09425CCT_2coord: 117..137
score: 6.8
NoneNo IPR availablePANTHERPTHR33077FAMILY NOT NAMEDcoord: 6..137
score: 1.1
NoneNo IPR availablePANTHERPTHR33077:SF17PROTEIN TIFY 5A-RELATEDcoord: 6..137
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g05170Cucsa.047800Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g05170Cucsa.054630Cucumber (Gy14) v1cgycpeB0065
Cp4.1LG20g05170CmaCh18G004760Cucurbita maxima (Rimu)cmacpeB438
Cp4.1LG20g05170CmaCh03G014060Cucurbita maxima (Rimu)cmacpeB675
Cp4.1LG20g05170CmaCh07G000990Cucurbita maxima (Rimu)cmacpeB881
Cp4.1LG20g05170CmoCh18G004530Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g05170CmoCh03G014000Cucurbita moschata (Rifu)cmocpeB628
Cp4.1LG20g05170CmoCh07G001010Cucurbita moschata (Rifu)cmocpeB818
Cp4.1LG20g05170Cla009781Watermelon (97103) v1cpewmB513
Cp4.1LG20g05170Cla019575Watermelon (97103) v1cpewmB508
Cp4.1LG20g05170Csa1G435720Cucumber (Chinese Long) v2cpecuB514
Cp4.1LG20g05170Csa6G523460Cucumber (Chinese Long) v2cpecuB525
Cp4.1LG20g05170ClCG01G024700Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g05170ClCG03G006750Watermelon (Charleston Gray)cpewcgB468
Cp4.1LG20g05170CSPI06G36360Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g05170CSPI01G21030Wild cucumber (PI 183967)cpecpiB516
Cp4.1LG20g05170Lsi01G001380Bottle gourd (USVL1VR-Ls)cpelsiB416
Cp4.1LG20g05170Lsi02G008980Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g05170Carg19276Silver-seed gourdcarcpeB0416
Cp4.1LG20g05170Carg22545Silver-seed gourdcarcpeB0594
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g05170Cp4.1LG09g07550Cucurbita pepo (Zucchini)cpecpeB048
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g05170Cucumber (Chinese Long) v3cpecucB0633
Cp4.1LG20g05170Cucumber (Chinese Long) v3cpecucB0650
Cp4.1LG20g05170Wax gourdcpewgoB0630
Cp4.1LG20g05170Wax gourdcpewgoB0649
Cp4.1LG20g05170Cucurbita pepo (Zucchini)cpecpeB088
Cp4.1LG20g05170Cucurbita pepo (Zucchini)cpecpeB412
Cp4.1LG20g05170Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g05170Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g05170Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g05170Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g05170Cucumber (Gy14) v2cgybcpeB079
Cp4.1LG20g05170Cucumber (Gy14) v2cgybcpeB813
Cp4.1LG20g05170Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g05170Melon (DHL92) v3.6.1cpemedB572
Cp4.1LG20g05170Silver-seed gourdcarcpeB1030
Cp4.1LG20g05170Silver-seed gourdcarcpeB1123