CmaCh18G004760 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G004760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Jasmonate-zim-domain protein 8, putative
Location	Cma_Chr18 : 2690908 .. 2692460 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGTTCTTCCCATTTTCATGGAGAAAAATTGTAACTTGGAACTTTGTCTTTCTTCTTCTTCTATGGCTTCTTCCGATCATGATTCCGGTGACCTCCGCCGCCACCACCCTTCCCTCCACCAGTTCTTGTAAGTTTTCTCTCTCTTTTTTGCTGTTCGTAAACAATGAACCTTCACAATCACATATAATATTGTTTGTGATTATACCTACTATGAAATCTGATGTTGGTTGGAAAGAAGAATGAAACATTATTTGTAAGAGTGTGAAAATTTTTCTCTAACTTTAAGGGAAAACTCAGAGAGGACAATATTTACTAGTCGTAGGTTTGAGCTGAACATGAGATAGTGTACCAGTAAGGATGTTGGACCCTAAAGTGGGTGGATTGTGGGTCCCACATCGATTATAGAAGGGAATGAGTGCTAACAAAGACGTTGAGCCACGAAGGGGGTAGATTGTAAGATCCCTCATCGGTTGGGGAGGAGAATGAAACACCATTTATAACAGTGTGGAAACCTCTCCTTAGCAGACGTTTTAAAAACCTTGAGGGGAAACCTGAAAGAGAAAGCCTAAAGAGGACAATACTTGCTAGTTGTGGGTTTGAGCTGTTAAAAATGGTATTAGAGCTAGACAACGGACGATGTGCCAGTGAAGAGGCTGAACCCGAAGTGGATGGATTGGGGAGTCTCACATCGATTAAAGAAGGGAACGAGTGACAACGAGGACGCTGAATCACAAAGAGGGTGGATTGTAAGATCCTCATCGATTGAGGAGGAGAATGAAACACCATTTATAACGATGTGGAAACCTCTCTTTAGCAAACGTTTTAAAAAGTTTGAGGGGAAGCCTGAAAAAGGAAAGCTCAAAGAGGATAATATCCGCTAGCGAGGACGCTGGTCTCGAAGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACTATTTATAAAAGTGTGGAAACTTCTCGGTAGGGTTTTAAAAACCTTGAGGGGAAGCAGGAGAACCCAAAGAAAACAATATTTGTTAGTGGTAGGCTTGAGTCGTTACACCTACGAGGTTTAACACCTAAGGATTATCACTTATAAAACAACGAACCTCCACAATAACATGAGAGTTCTCGTGACTTTGATTTTAGTTTTTCGTATCAATAAAGATAGTGTCTCGTGACTTTGCGATTGATTAAGGTTGTTCTTATGGCAGAGATGATGAGTCGAGCAAGAACTCTCATCAGCAGATGACAATTTTCTACAATGGAAGAGTTTGTGTGGCTGATTTTACAGAGGATCAGGTACCTTTCTTCTTGGGATTGCATTAGAAAATGGTTGATTTTGATTAGAAATTCATGAACTTGTTGGTGCATTTCAGGCCAGAGCTATAATAATGCTAGCAACCCGACGATCCACGAGTCGTCGACATCGATCGGAACCGTGTAAACGTGAAGGTGGTTCCGATTCCGGGCTCTCCATGAAGAGATCTTTGCAGAGGTTTCTACATAAAAGGAAGAATCGGATTCAATCTGCTTCACCTTACACTCAATAACCCA

mRNA sequence

GCGGTTCTTCCCATTTTCATGGAGAAAAATTGTAACTTGGAACTTTGTCTTTCTTCTTCTTCTATGGCTTCTTCCGATCATGATTCCGGTGACCTCCGCCGCCACCACCCTTCCCTCCACCAGTTCTTAGATGATGAGTCGAGCAAGAACTCTCATCAGCAGATGACAATTTTCTACAATGGAAGAGTTTGTGTGGCTGATTTTACAGAGGATCAGGCCAGAGCTATAATAATGCTAGCAACCCGACGATCCACGAGTCGTCGACATCGATCGGAACCGTGTAAACGTGAAGGTGGTTCCGATTCCGGGCTCTCCATGAAGAGATCTTTGCAGAGGTTTCTACATAAAAGGAAGAATCGGATTCAATCTGCTTCACCTTACACTCAATAACCCA

Coding sequence (CDS)

ATGGAGAAAAATTGTAACTTGGAACTTTGTCTTTCTTCTTCTTCTATGGCTTCTTCCGATCATGATTCCGGTGACCTCCGCCGCCACCACCCTTCCCTCCACCAGTTCTTAGATGATGAGTCGAGCAAGAACTCTCATCAGCAGATGACAATTTTCTACAATGGAAGAGTTTGTGTGGCTGATTTTACAGAGGATCAGGCCAGAGCTATAATAATGCTAGCAACCCGACGATCCACGAGTCGTCGACATCGATCGGAACCGTGTAAACGTGAAGGTGGTTCCGATTCCGGGCTCTCCATGAAGAGATCTTTGCAGAGGTTTCTACATAAAAGGAAGAATCGGATTCAATCTGCTTCACCTTACACTCAATAA

Protein sequence

MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVADFTEDQARAIIMLATRRSTSRRHRSEPCKREGGSDSGLSMKRSLQRFLHKRKNRIQSASPYTQ

Homology

[Close]

BLAST of CmaCh18G004760 vs. Swiss-Prot
Match: TIF5A_ARATH (Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-09
Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           +++NC+LEL L  +S  S   D+  +     S +   ++ES     Q++TIFYNG++C +
Sbjct: 3   LQQNCDLELRLFPTSYDSDSSDTTSVVESTSSGNPQPNEES-----QRITIFYNGKMCFS 62

Query: 61  -DFTEDQARAIIMLATR--RSTSRRHRSEPCKREGG------SDSGLSMKRSLQRFLHKR 120
            D T  QAR+II +A+R  ++ S  + S+P  +          +   SMK+SLQ FL KR
Sbjct: 63  SDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLPNPKASMKKSLQSFLQKR 122

Query: 121 KNRIQSASPY 122
           K RIQ+ SPY
Sbjct: 123 KIRIQATSPY 127

[Close]

BLAST of CmaCh18G004760 vs. Swiss-Prot
Match: TIF5B_ARATH (Protein TIFY 5B OS=Arabidopsis thaliana GN=TIFY 5B PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.4e-08
Identity = 53/141 (37.59%), Postives = 66/141 (46.81%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESS------KNSHQQMTIFYN 60
           M+  C+LEL L +SS  S  H S             LD+ SS      K   Q +TIFYN
Sbjct: 20  MQTKCDLELRLLTSSYDSDFHSS-------------LDESSSSEISQPKQESQILTIFYN 79

Query: 61  GRVCVA-DFTEDQARAIIMLATRRSTSRRHRSEPCKREGGSD-------------SGLSM 120
           G +CV+ D T  +A AI+ LA+R       +S   +   GSD                SM
Sbjct: 80  GHMCVSSDLTHLEANAILSLASR---DVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASM 139

Query: 121 KRSLQRFLHKRKNRIQSASPY 122
           KRSL  FL KR  RIQ+ SPY
Sbjct: 140 KRSLHSFLQKRSLRIQATSPY 144

[Close]

BLAST of CmaCh18G004760 vs. TrEMBL
Match: A0A0A0LXJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435720 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-30
Identity = 88/142 (61.97%), Postives = 95/142 (66.90%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDD--ESSKNSHQQMTIFYNGRVC 60
           ++ NCNLEL LS SS     H       HHP LH FLDD  E +KNSHQQMTIFYNGRVC
Sbjct: 8   IDHNCNLELRLSPSSSTFLSHPLPH-SHHHPPLHHFLDDDDECNKNSHQQMTIFYNGRVC 67

Query: 61  VADFTEDQARAIIMLATR----RSTSRRHRSE-------PCKRE--------GGSDSGLS 120
           VADFTEDQA+AIIMLA+R    RST+  H+ E        C RE         GS SGLS
Sbjct: 68  VADFTEDQAKAIIMLASRQVEDRSTNPEHKLERPSTSPDQCHREPVSLSVSGSGSGSGLS 127

Query: 121 MKRSLQRFLHKRKNRIQSASPY 122
           MKRSLQRFL KRKNRIQSASPY
Sbjct: 128 MKRSLQRFLQKRKNRIQSASPY 148

[Close]

BLAST of CmaCh18G004760 vs. TrEMBL
Match: A0A061GKU8_THECC (Jasmonate-zim-domain protein 8, putative OS=Theobroma cacao GN=TCM_029461 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16
Identity = 63/131 (48.09%), Postives = 75/131 (57.25%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS +   HD  +              ES +N  QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELRLLPSSYSGGHHDMMEE-----------SSESPQNQQQQLTIFYNGRVCVC 60

Query: 61  DFTEDQARAIIMLATRRSTSR-----RHRSEPCKREGGS-----DSGLSMKRSLQRFLHK 120
           D TE QARAI+MLA R +  R        S P      S     ++G++MKRSLQRFL K
Sbjct: 61  DVTELQARAILMLANRETDERITTPTGSGSVPASPTLQSQLYSPNTGMTMKRSLQRFLQK 120

Query: 121 RKNRIQSASPY 122
           RKNRIQ+ SPY
Sbjct: 121 RKNRIQATSPY 120

[Close]

BLAST of CmaCh18G004760 vs. TrEMBL
Match: A0A0D4D684_GOSBA (JAZ15 OS=Gossypium barbadense PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-16
Identity = 64/129 (49.61%), Postives = 73/129 (56.59%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS  S  HD  + R            ES K   QQ+TIFYNGRVCV+
Sbjct: 1   MRRNCNLELRLLPSSYPSDSHDMMEERI-----------ESPKTQQQQLTIFYNGRVCVS 60

Query: 61  DFTEDQARAIIMLATRRSTSRRHRS---EPCKREGGS-----DSGLSMKRSLQRFLHKRK 120
           D TE QA+AI+MLA R    R       EP      S     ++ LSMKRSLQRFL KRK
Sbjct: 61  DVTELQAKAILMLANRERDERMKSPTGWEPVSPTLKSQVKCPNTALSMKRSLQRFLQKRK 118

Query: 121 NRIQSASPY 122
            RIQ+ SPY
Sbjct: 121 TRIQATSPY 118

[Close]

BLAST of CmaCh18G004760 vs. TrEMBL
Match: A0A0D4D5X5_GOSBA (JAZ13 OS=Gossypium barbadense PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-16
Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS +  D                   E+ +N  QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELRLHPSSYSGGDRVEES-------------SENPENQQQQLTIFYNGRVCVC 60

Query: 61  DFTEDQARAIIMLATRRSTSR----RHRSEPC-----KREGGSDSGL--SMKRSLQRFLH 120
           D TE QARAI+M+A R +  R    R  SEP       +    ++GL  SMKRSLQRFL 
Sbjct: 61  DVTEIQARAILMIANRETDERLRTPRQGSEPASPTVHSQINSPNNGLSTSMKRSLQRFLQ 119

Query: 121 KRKNRIQSASPY 122
           KRKNRIQ+ SPY
Sbjct: 121 KRKNRIQATSPY 119

[Close]

BLAST of CmaCh18G004760 vs. TrEMBL
Match: A0A0B0PDL4_GOSAR (Protein TIFY 5A-like protein OS=Gossypium arboreum GN=F383_06859 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.0e-16
Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS +  D                   E+ +N  QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELRLHPSSYSGGDRVEES-------------SENPENQQQQLTIFYNGRVCVC 60

Query: 61  DFTEDQARAIIMLATRRSTSR----RHRSEPC-----KREGGSDSGL--SMKRSLQRFLH 120
           D TE QARAI+M+A R +  R    R  SEP       +    ++GL  SMKRSLQRFL 
Sbjct: 61  DVTEIQARAILMIANRETDERLRTPRPGSEPASPTVHSQINSPNNGLSTSMKRSLQRFLQ 119

Query: 121 KRKNRIQSASPY 122
           KRKNRIQ+ SPY
Sbjct: 121 KRKNRIQATSPY 119

[Close]

BLAST of CmaCh18G004760 vs. TAIR10
Match: AT1G30135.1 (AT1G30135.1 jasmonate-zim-domain protein 8)

HSP 1 Score: 62.4 bits (150), Expect = 2.3e-10
Identity = 49/130 (37.69%), Postives = 75/130 (57.69%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           +++NC+LEL L  +S  S   D+  +     S +   ++ES     Q++TIFYNG++C +
Sbjct: 3   LQQNCDLELRLFPTSYDSDSSDTTSVVESTSSGNPQPNEES-----QRITIFYNGKMCFS 62

Query: 61  -DFTEDQARAIIMLATR--RSTSRRHRSEPCKREGG------SDSGLSMKRSLQRFLHKR 120
            D T  QAR+II +A+R  ++ S  + S+P  +          +   SMK+SLQ FL KR
Sbjct: 63  SDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLPNPKASMKKSLQSFLQKR 122

Query: 121 KNRIQSASPY 122
           K RIQ+ SPY
Sbjct: 123 KIRIQATSPY 127

[Close]

BLAST of CmaCh18G004760 vs. TAIR10
Match: AT2G34600.1 (AT2G34600.1 jasmonate-zim-domain protein 7)

HSP 1 Score: 58.9 bits (141), Expect = 2.5e-09
Identity = 53/141 (37.59%), Postives = 66/141 (46.81%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESS------KNSHQQMTIFYN 60
           M+  C+LEL L +SS  S  H S             LD+ SS      K   Q +TIFYN
Sbjct: 20  MQTKCDLELRLLTSSYDSDFHSS-------------LDESSSSEISQPKQESQILTIFYN 79

Query: 61  GRVCVA-DFTEDQARAIIMLATRRSTSRRHRSEPCKREGGSD-------------SGLSM 120
           G +CV+ D T  +A AI+ LA+R       +S   +   GSD                SM
Sbjct: 80  GHMCVSSDLTHLEANAILSLASR---DVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASM 139

Query: 121 KRSLQRFLHKRKNRIQSASPY 122
           KRSL  FL KR  RIQ+ SPY
Sbjct: 140 KRSLHSFLQKRSLRIQATSPY 144

[Close]

BLAST of CmaCh18G004760 vs. TAIR10
Match: AT3G22275.1 (AT3G22275.1 unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 4.4e-06
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 3   KNCNLELCLS--SSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 62
           K C+L+L LS  +S++ S   DS             ++D SS    +++  FY+GR+   
Sbjct: 2   KGCSLDLHLSPMASTLQSCHQDST------------VNDRSSTIRSKEINAFYSGRLSEY 61

Query: 63  DFTEDQARAIIMLATRRSTSRRHRSEPCKREGGSDSGLSMKRSLQRFLHKRKNRIQS 118
           D  E Q RAII +A++          P + E  S  G S+KRS++RFL KRK R +S
Sbjct: 62  DLVEIQMRAIIEMASKDREVTALELVPVRLE--SPLGCSVKRSVKRFLEKRKKRSKS 104

[Close]

BLAST of CmaCh18G004760 vs. NCBI nr
Match: gi|778660933|ref|XP_011657199.1| (PREDICTED: protein TIFY 5A-like [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30
Identity = 88/142 (61.97%), Postives = 95/142 (66.90%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDD--ESSKNSHQQMTIFYNGRVC 60
           ++ NCNLEL LS SS     H       HHP LH FLDD  E +KNSHQQMTIFYNGRVC
Sbjct: 8   IDHNCNLELRLSPSSSTFLSHPLPH-SHHHPPLHHFLDDDDECNKNSHQQMTIFYNGRVC 67

Query: 61  VADFTEDQARAIIMLATR----RSTSRRHRSE-------PCKRE--------GGSDSGLS 120
           VADFTEDQA+AIIMLA+R    RST+  H+ E        C RE         GS SGLS
Sbjct: 68  VADFTEDQAKAIIMLASRQVEDRSTNPEHKLERPSTSPDQCHREPVSLSVSGSGSGSGLS 127

Query: 121 MKRSLQRFLHKRKNRIQSASPY 122
           MKRSLQRFL KRKNRIQSASPY
Sbjct: 128 MKRSLQRFLQKRKNRIQSASPY 148

[Close]

BLAST of CmaCh18G004760 vs. NCBI nr
Match: gi|720064124|ref|XP_010275855.1| (PREDICTED: protein TIFY 5A-like [Nelumbo nucifera])

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-17
Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 1


Query: 1   MEKNCNLELCLSS-SSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCV 60
           + +NCNL+LCL    S  SSD D+  L        Q   +++ +   QQ+TIFYNGRVCV
Sbjct: 10  LRRNCNLDLCLFPLGSRPSSDSDNSSLSEASIRT-QRQQEQAQQQKQQQLTIFYNGRVCV 69

Query: 61  ADFTEDQARAIIMLATRR-----STSRRHRSEPCKREGGSDSGLSMKRSLQRFLHKRKNR 120
            D T+ QARAII +A R      +T R   S P + +  S  GLSMKRSLQRFL KRKNR
Sbjct: 70  CDVTDLQARAIICIARREMGERMTTPRSPLSPPLQSQLQSLPGLSMKRSLQRFLQKRKNR 129

Query: 121 IQSASPY 122
           +Q ASPY
Sbjct: 130 MQDASPY 135

[Close]

BLAST of CmaCh18G004760 vs. NCBI nr
Match: gi|720089348|ref|XP_010244732.1| (PREDICTED: protein TIFY 5A-like [Nelumbo nucifera])

HSP 1 Score: 95.5 bits (236), Expect = 6.8e-17
Identity = 65/132 (49.24%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 1   MEKNCNLELCLSS-SSMASSDHDSGDLRRHHPSL---HQFLDDESSKNSHQQMTIFYNGR 60
           M ++CNL+LCL    S+ S+D  SG      P      Q       +   QQ+TIFYNGR
Sbjct: 10  MRRSCNLDLCLFPIGSLPSNDSGSGSSSSGEPIKTPEQQQQQQAQQQQQQQQLTIFYNGR 69

Query: 61  VCVADFTEDQARAIIMLATRR-----STSRRHRSEPCKREGGSDSGLSMKRSLQRFLHKR 120
           VCV D TE QARAII +A R      ST R   S   +    S  GLSMKRSLQRFL KR
Sbjct: 70  VCVCDVTEFQARAIIWIARREMEERLSTPRSPLSPSLQSPLQSPPGLSMKRSLQRFLQKR 129

Query: 121 KNRIQSASPYTQ 124
           KNR+Q ASPY Q
Sbjct: 130 KNRMQDASPYRQ 141

[Close]

BLAST of CmaCh18G004760 vs. NCBI nr
Match: gi|590622444|ref|XP_007025052.1| (Jasmonate-zim-domain protein 8, putative [Theobroma cacao])

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-16
Identity = 63/131 (48.09%), Postives = 75/131 (57.25%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS +   HD  +              ES +N  QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELRLLPSSYSGGHHDMMEE-----------SSESPQNQQQQLTIFYNGRVCVC 60

Query: 61  DFTEDQARAIIMLATRRSTSR-----RHRSEPCKREGGS-----DSGLSMKRSLQRFLHK 120
           D TE QARAI+MLA R +  R        S P      S     ++G++MKRSLQRFL K
Sbjct: 61  DVTELQARAILMLANRETDERITTPTGSGSVPASPTLQSQLYSPNTGMTMKRSLQRFLQK 120

Query: 121 RKNRIQSASPY 122
           RKNRIQ+ SPY
Sbjct: 121 RKNRIQATSPY 120

[Close]

BLAST of CmaCh18G004760 vs. NCBI nr
Match: gi|767812344|gb|AJT58403.1| (JAZ13 [Gossypium barbadense])

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-16
Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 1   MEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFYNGRVCVA 60
           M +NCNLEL L  SS +  D                   E+ +N  QQ+TIFYNGRVCV 
Sbjct: 1   MRRNCNLELRLHPSSYSGGDRVEES-------------SENPENQQQQLTIFYNGRVCVC 60

Query: 61  DFTEDQARAIIMLATRRSTSR----RHRSEPC-----KREGGSDSGL--SMKRSLQRFLH 120
           D TE QARAI+M+A R +  R    R  SEP       +    ++GL  SMKRSLQRFL 
Sbjct: 61  DVTEIQARAILMIANRETDERLRTPRQGSEPASPTVHSQINSPNNGLSTSMKRSLQRFLQ 119

Query: 121 KRKNRIQSASPY 122
           KRKNRIQ+ SPY
Sbjct: 121 KRKNRIQATSPY 119

The following BLAST results are available for this feature:

BLAST of CmaCh18G004760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIF5A_ARATH	4.0e-09	37.69	Protein TIFY 5A OS=Arabidopsis thaliana GN=TIFY5A PE=1 SV=1	[more]
TIF5B_ARATH	4.4e-08	37.59	Protein TIFY 5B OS=Arabidopsis thaliana GN=TIFY 5B PE=2 SV=1	[more]

BLAST of CmaCh18G004760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXJ5_CUCSA	2.9e-30	61.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435720 PE=4 SV=1	[more]
A0A061GKU8_THECC	1.4e-16	48.09	Jasmonate-zim-domain protein 8, putative OS=Theobroma cacao GN=TCM_029461 PE=4 S...	[more]
A0A0D4D684_GOSBA	2.4e-16	49.61	JAZ15 OS=Gossypium barbadense PE=2 SV=1	[more]
A0A0D4D5X5_GOSBA	2.4e-16	47.73	JAZ13 OS=Gossypium barbadense PE=2 SV=1	[more]
A0A0B0PDL4_GOSAR	4.0e-16	47.73	Protein TIFY 5A-like protein OS=Gossypium arboreum GN=F383_06859 PE=4 SV=1	[more]

BLAST of CmaCh18G004760 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30135.1	2.3e-10	37.69	jasmonate-zim-domain protein 8	[more]
AT2G34600.1	2.5e-09	37.59	jasmonate-zim-domain protein 7	[more]
AT3G22275.1	4.4e-06	35.04	unknown protein	[more]

BLAST of CmaCh18G004760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660933\|ref\|XP_011657199.1\|	4.1e-30	61.97	PREDICTED: protein TIFY 5A-like [Cucumis sativus]	[more]
gi\|720064124\|ref\|XP_010275855.1\|	1.8e-17	49.61	PREDICTED: protein TIFY 5A-like [Nelumbo nucifera]	[more]
gi\|720089348\|ref\|XP_010244732.1\|	6.8e-17	49.24	PREDICTED: protein TIFY 5A-like [Nelumbo nucifera]	[more]
gi\|590622444\|ref\|XP_007025052.1\|	2.0e-16	48.09	Jasmonate-zim-domain protein 8, putative [Theobroma cacao]	[more]
gi\|767812344\|gb\|AJT58403.1\|	3.4e-16	47.73	JAZ13 [Gossypium barbadense]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010399	Tify_dom
IPR018467	CCT_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1903507	negative regulation of nucleic acid-templated transcription
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003714	transcription corepressor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G004760.1	CmaCh18G004760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 46..74 score: 1.3
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 42..76 score: 5.
IPR010399	Tify domain	PROFILE	PS51320	TIFY	coord: 42..76 score: 12
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	CCT_2	coord: 101..121 score: 9.7
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 1..121 score: 4.3
None	No IPR available	PANTHER	PTHR33077:SF17	PROTEIN TIFY 5A-RELATED	coord: 1..121 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G004760	Cucsa.047800	Cucumber (Gy14) v1	cgycmaB0037
CmaCh18G004760	Cucsa.054630	Cucumber (Gy14) v1	cgycmaB0069
CmaCh18G004760	Cla009781	Watermelon (97103) v1	cmawmB379
CmaCh18G004760	Cla019575	Watermelon (97103) v1	cmawmB370
CmaCh18G004760	Csa1G435720	Cucumber (Chinese Long) v2	cmacuB398
CmaCh18G004760	Csa6G523460	Cucumber (Chinese Long) v2	cmacuB422
CmaCh18G004760	ClCG03G006750	Watermelon (Charleston Gray)	cmawcgB357
CmaCh18G004760	ClCG01G024700	Watermelon (Charleston Gray)	cmawcgB345
CmaCh18G004760	CSPI01G21030	Wild cucumber (PI 183967)	cmacpiB402
CmaCh18G004760	CSPI06G36360	Wild cucumber (PI 183967)	cmacpiB426
CmaCh18G004760	CmoCh03G014000	Cucurbita moschata (Rifu)	cmacmoB417
CmaCh18G004760	CmoCh18G004530	Cucurbita moschata (Rifu)	cmacmoB407
CmaCh18G004760	CmoCh13G005560	Cucurbita moschata (Rifu)	cmacmoB398
CmaCh18G004760	CmoCh07G001010	Cucurbita moschata (Rifu)	cmacmoB429
CmaCh18G004760	Lsi01G001380	Bottle gourd (USVL1VR-Ls)	cmalsiB368
CmaCh18G004760	Lsi02G008980	Bottle gourd (USVL1VR-Ls)	cmalsiB369
CmaCh18G004760	Cp4.1LG09g07550	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G004760	Cp4.1LG19g05970	Cucurbita pepo (Zucchini)	cmacpeB437
CmaCh18G004760	Cp4.1LG20g05170	Cucurbita pepo (Zucchini)	cmacpeB438
CmaCh18G004760	MELO3C007125.2	Melon (DHL92) v3.6.1	cmamedB440
CmaCh18G004760	CsaV3_1G032370	Cucumber (Chinese Long) v3	cmacucB0475
CmaCh18G004760	CsaV3_6G051810	Cucumber (Chinese Long) v3	cmacucB0506
CmaCh18G004760	Cla97C03G058010	Watermelon (97103) v2	cmawmbB416
CmaCh18G004760	Cla97C01G024650	Watermelon (97103) v2	cmawmbB396
CmaCh18G004760	Bhi08G001680	Wax gourd	cmawgoB0531
CmaCh18G004760	Bhi03G000085	Wax gourd	cmawgoB0513
CmaCh18G004760	CsGy6G035710	Cucumber (Gy14) v2	cgybcmaB768
CmaCh18G004760	CsGy1G020760	Cucumber (Gy14) v2	cgybcmaB094
CmaCh18G004760	Carg19946	Silver-seed gourd	carcmaB1110
CmaCh18G004760	Carg15002	Silver-seed gourd	carcmaB1022
CmaCh18G004760	Carg22545	Silver-seed gourd	carcmaB0586
CmaCh18G004760	Carg19276	Silver-seed gourd	carcmaB0412

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G004760	CmaCh13G005280	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh18G004760	CmaCh03G014060	Cucurbita maxima (Rimu)	cmacmaB397
CmaCh18G004760	CmaCh07G000990	Cucurbita maxima (Rimu)	cmacmaB414

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G004760	Melon (DHL92) v3.6.1	cmamedB423
CmaCh18G004760	Melon (DHL92) v3.5.1	cmameB364
CmaCh18G004760	Melon (DHL92) v3.5.1	cmameB381
CmaCh18G004760	Cucurbita pepo (Zucchini)	cmacpeB417