Cp4.1LG20g04180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g04180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlucose-fructose oxidoreductase domain-containing protein 2, putative
LocationCp4.1LG20 : 2390933 .. 2391202 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCGCACCAGATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

mRNA sequence

ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCGCACCAGATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

Coding sequence (CDS)

ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCGCACCAGATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

Protein sequence

MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYELQHCANVYNSAMRAYVLWGKSES
Homology
[Close]
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match: A0A0A0LXB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-28
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 1 

Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MK+EG R LERMNAYGKKQC +LFW+V+AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 60

Query: 61 GRT----------RYELQHCANVYNSAMRAYVLWGKSE 89
          G +          ++E+Q+C NVYNSAM  YVLW KSE
Sbjct: 61 GHSEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match: I1MED1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G069900 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-16
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE- 67
          RLE +NAYGKK+C +LFWRVRAALKKA+KNG  +  +LKFQYDPSSYALNFDDG    + 
Sbjct: 6  RLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 ------LQHCANVYNSAMRAYVLWGKS 88
                L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWVKT 89

[Close]
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match: A0A151T7K4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_017585 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-16
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 9  LERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDG------- 68
          +E +NAYGKK+C +LFWRVRAALKKA+ NG N + +L FQYDPSSYALNFDDG       
Sbjct: 4  VEWVNAYGKKRCRSLFWRVRAALKKALNNGGNHRQRLNFQYDPSSYALNFDDGCCHASKK 63

Query: 69 ----RTRYELQHCANVYNSAMRAYVLWGKS 88
                  EL    N  N+    YVLW K+
Sbjct: 64 FIGDARLLELTDIINNNNTTTFVYVLWLKT 93

[Close]
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match: A0A067G8B6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034488mg PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-15
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 1 

Query: 7  RRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE 66
          R LE +N+YG+++C +LFWRVRAALKKA+K G  +Q   KFQYDPSSYALNFDDGR+ Y 
Sbjct: 5  RSLEWVNSYGQRKCRSLFWRVRAALKKAVKTGGKQQ--FKFQYDPSSYALNFDDGRSNYG 64

Query: 67 L----------QHCANVYNSAMRAYVLWGKSE 89
          L          Q C+   N  M   VLW +S+
Sbjct: 65 LGANGVKQAQHQDCSESKN-VMWVCVLWVESQ 93

[Close]
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match: A0A0B2PH59_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014330 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.5e-15
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE- 67
          RLE +N YGKK+C +LFWRVRAALK+A KNG  +  +LKFQYDPSSYALNFDDG    + 
Sbjct: 6  RLEWVNTYGKKRCRSLFWRVRAALKRAFKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 ------LQHCANVYNSAMRAYVLWGKS 88
                L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWIKT 89

[Close]
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match: gi|700209545|gb|KGN64641.1| (hypothetical protein Csa_1G073010 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-28
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 1 

Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MK+EG R LERMNAYGKKQC +LFW+V+AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 60

Query: 61 GRT----------RYELQHCANVYNSAMRAYVLWGKSE 89
          G +          ++E+Q+C NVYNSAM  YVLW KSE
Sbjct: 61 GHSEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match: gi|947061538|gb|KRH10799.1| (hypothetical protein GLYMA_15G069900 [Glycine max])

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-16
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE- 67
          RLE +NAYGKK+C +LFWRVRAALKKA+KNG  +  +LKFQYDPSSYALNFDDG    + 
Sbjct: 6  RLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 ------LQHCANVYNSAMRAYVLWGKS 88
                L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWVKT 89

[Close]
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match: gi|1012351834|gb|KYP63023.1| (hypothetical protein KK1_017585 [Cajanus cajan])

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-16
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 1 

Query: 9  LERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDG------- 68
          +E +NAYGKK+C +LFWRVRAALKKA+ NG N + +L FQYDPSSYALNFDDG       
Sbjct: 4  VEWVNAYGKKRCRSLFWRVRAALKKALNNGGNHRQRLNFQYDPSSYALNFDDGCCHASKK 63

Query: 69 ----RTRYELQHCANVYNSAMRAYVLWGKS 88
                  EL    N  N+    YVLW K+
Sbjct: 64 FIGDARLLELTDIINNNNTTTFVYVLWLKT 93

[Close]
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match: gi|641857058|gb|KDO75824.1| (hypothetical protein CISIN_1g034488mg [Citrus sinensis])

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-15
Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 1 

Query: 7  RRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE 66
          R LE +N+YG+++C +LFWRVRAALKKA+K G  +Q   KFQYDPSSYALNFDDGR+ Y 
Sbjct: 5  RSLEWVNSYGQRKCRSLFWRVRAALKKAVKTGGKQQ--FKFQYDPSSYALNFDDGRSNYG 64

Query: 67 L----------QHCANVYNSAMRAYVLWGKSE 89
          L          Q C+   N  M   VLW +S+
Sbjct: 65 LGANGVKQAQHQDCSESKN-VMWVCVLWVESQ 93

[Close]
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match: gi|734337628|gb|KHN08565.1| (hypothetical protein glysoja_014330 [Glycine soja])

HSP 1 Score: 88.2 bits (217), Expect = 7.9e-15
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGRTRYE- 67
          RLE +N YGKK+C +LFWRVRAALK+A KNG  +  +LKFQYDPSSYALNFDDG    + 
Sbjct: 6  RLEWVNTYGKKRCRSLFWRVRAALKRAFKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 ------LQHCANVYNSAMRAYVLWGKS 88
                L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWIKT 89

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g04180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG20g04180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXB8_CUCSA1.1e-2868.37Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073010 PE=4 SV=1[more]
I1MED1_SOYBN3.8e-1656.32Uncharacterized protein OS=Glycine max GN=GLYMA_15G069900 PE=4 SV=1[more]
A0A151T7K4_CAJCA5.0e-1653.33Uncharacterized protein OS=Cajanus cajan GN=KK1_017585 PE=4 SV=1[more]
A0A067G8B6_CITSI2.5e-1553.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034488mg PE=4 SV=1[more]
A0A0B2PH59_GLYSO5.5e-1554.02Uncharacterized protein OS=Glycine soja GN=glysoja_014330 PE=4 SV=1[more]
BLAST of Cp4.1LG20g04180 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG20g04180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209545|gb|KGN64641.1|1.6e-2868.37hypothetical protein Csa_1G073010 [Cucumis sativus][more]
gi|947061538|gb|KRH10799.1|5.5e-1656.32hypothetical protein GLYMA_15G069900 [Glycine max][more]
gi|1012351834|gb|KYP63023.1|7.1e-1653.33hypothetical protein KK1_017585 [Cajanus cajan][more]
gi|641857058|gb|KDO75824.1|3.5e-1553.26hypothetical protein CISIN_1g034488mg [Citrus sinensis][more]
gi|734337628|gb|KHN08565.1|7.9e-1554.02hypothetical protein glysoja_014330 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g04180.1Cp4.1LG20g04180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538FAMILY NOT NAMEDcoord: 7..87
score: 5.3
NoneNo IPR availablePANTHERPTHR34538:SF3SUBFAMILY NOT NAMEDcoord: 7..87
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g04180CmaCh13G006640Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g04180CmaCh07G002660Cucurbita maxima (Rimu)cmacpeB881
Cp4.1LG20g04180CmoCh13G006840Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g04180CmoCh07G002560Cucurbita moschata (Rifu)cmocpeB818
Cp4.1LG20g04180Cla019471Watermelon (97103) v1cpewmB503
Cp4.1LG20g04180Cla001371Watermelon (97103) v1cpewmB513
Cp4.1LG20g04180Csa1G073010Cucumber (Chinese Long) v2cpecuB506
Cp4.1LG20g04180MELO3C007306Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g04180MELO3C002569Melon (DHL92) v3.5.1cpemeB477
Cp4.1LG20g04180ClCG01G022750Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g04180ClCG03G005660Watermelon (Charleston Gray)cpewcgB463
Cp4.1LG20g04180CSPI06G34390Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g04180CSPI01G11770Wild cucumber (PI 183967)cpecpiB506
Cp4.1LG20g04180Lsi02G007150Bottle gourd (USVL1VR-Ls)cpelsiB417
Cp4.1LG20g04180Lsi01G003390Bottle gourd (USVL1VR-Ls)cpelsiB415
Cp4.1LG20g04180MELO3C002569.2Melon (DHL92) v3.6.1cpemedB559
Cp4.1LG20g04180MELO3C007306.2Melon (DHL92) v3.6.1cpemedB572
Cp4.1LG20g04180CsaV3_1G011920Cucumber (Chinese Long) v3cpecucB0624
Cp4.1LG20g04180Bhi03G000348Wax gourdcpewgoB0632
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g04180Cp4.1LG09g08680Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG20g04180Cp4.1LG19g07420Cucurbita pepo (Zucchini)cpecpeB412
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g04180Cucurbita pepo (Zucchini)cpecpeB086
Cp4.1LG20g04180Cucurbita pepo (Zucchini)cpecpeB437
Cp4.1LG20g04180Cucurbita pepo (Zucchini)cpecpeB445
Cp4.1LG20g04180Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g04180Cucumber (Gy14) v1cgycpeB0328
Cp4.1LG20g04180Cucumber (Gy14) v1cgycpeB0394
Cp4.1LG20g04180Cucurbita maxima (Rimu)cmacpeB044
Cp4.1LG20g04180Cucurbita maxima (Rimu)cmacpeB438
Cp4.1LG20g04180Cucurbita maxima (Rimu)cmacpeB533
Cp4.1LG20g04180Cucurbita maxima (Rimu)cmacpeB677
Cp4.1LG20g04180Cucurbita moschata (Rifu)cmocpeB019
Cp4.1LG20g04180Cucurbita moschata (Rifu)cmocpeB403
Cp4.1LG20g04180Cucurbita moschata (Rifu)cmocpeB443
Cp4.1LG20g04180Cucurbita moschata (Rifu)cmocpeB631
Cp4.1LG20g04180Cucumber (Chinese Long) v2cpecuB525
Cp4.1LG20g04180Watermelon (Charleston Gray)cpewcgB449
Cp4.1LG20g04180Watermelon (97103) v1cpewmB527
Cp4.1LG20g04180Melon (DHL92) v3.5.1cpemeB481
Cp4.1LG20g04180Cucumber (Gy14) v2cgybcpeB070
Cp4.1LG20g04180Cucumber (Gy14) v2cgybcpeB813
Cp4.1LG20g04180Cucumber (Gy14) v2cgybcpeB944
Cp4.1LG20g04180Melon (DHL92) v3.6.1cpemedB566
Cp4.1LG20g04180Silver-seed gourdcarcpeB0215
Cp4.1LG20g04180Silver-seed gourdcarcpeB0916
Cp4.1LG20g04180Silver-seed gourdcarcpeB1222
Cp4.1LG20g04180Silver-seed gourdcarcpeB1291
Cp4.1LG20g04180Silver-seed gourdcarcpeB1314
Cp4.1LG20g04180Cucumber (Chinese Long) v3cpecucB0650
Cp4.1LG20g04180Cucumber (Chinese Long) v3cpecucB0656
Cp4.1LG20g04180Wax gourdcpewgoB0637