Cp4.1LG20g02720 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGTCTTGACTATAACGGGTTATAAAATTGTCGATCACGTCGTGACAGCCTTGACTATAACGTTTAAGCCTCGTAGTAGGCAGAGATATATGCATGAAGAACACCTGGCTCCAAAACGATATGCATGAAGCAAGAAGCATGAGGCAAAAGGGTGGGAAAGGGCATCAAGAAAACTGACAAACTTTTCGGTTATAATCTTTACCCTAAACACTGTAATAAAGCCATAAATTCTTCCCTTAATCACACCAAAATCACTCCTCTTTTACGCTTATTATATATATATATATATAATCCCACATTCCCCAACCATTACACATTACCTCTACTCATCCCCTGTTTCACCATGATCATCCAGCCACCTCGTTTGGCCGCCTCCGCCGCCCTGCTCCTCCTCCTAGTCGTCTTCCTCCGATGCTCGGACGAGACGGTTTCAGAGACAAATGGGGTTCCGGCGATTTTCGTGTTCGGCGACTCTCTTGTGGATGTTGGCAACAATAATTTTCTCCGATCAGTTGCTAGAGCCAATTATTATCCTTATGGGATTGATTTTCTTTCGGGTCCTACCGGGAGGTTTTCTAATGGACGAACCGTTATAGATATGTTTGGTATCGTTAATCTTTCTTCATAGACTTGTTTAGAGCCTGTTTCTATTGTTTTTTTTTTAAAGAGTTTTAATGTGTGATTGTCTTGCAGTGGACATGTTTGGAATTCCGAACGCTCCGGAATTTGCGAATCCGAACACCACCGGAGTTGGAATACTCCACGGCGTCAACTATGCTTCGGCTGCTGCTGGAATCCTCGACGAGACTGGCAGACATTACGTATGCGTTCCTGGGTTGTTGTGTAAGTTCAAAATTATTCAAAAACGTGTTTTTAATCGTTCGAATCGGTTTTGGATACAGGGCGAGAGGTACAGCCTGAGCCAGCAAGTGGTGAATTTTGAAAGCACTTTGAATGAGTTAAGGAGATCAATGGGGAGTTGGAATCTGAGTCGTTATTTATCAAAATCCTTAGCCTTTTTGGTGTTTGGAAGCAACGATTACATTAACAACTACCTGTTGCCGGAGCTCTACACTTCCCGCTTCAGATATACCCCTAATCAATTCGCTAACCTTCTCCTAAACCGATATTCTCGCCAGCTTCTAGTGAGTTCTTTTTCTCTGGGTTAACCCACTACATGTTTATTATACCGTTGATGATTATTGGGAGAGAGTCCCACGTTGGCTAATTTAGGGAATGATCATTACAAATAAGAAAACATCTCCATTGTTAGGAAGCTTTTTTGGAAAATTCAAAACAAAGCCACGAGCGCTTATGCTCAAAATGGACAATATCATACTAGTATGGAGATCCGTGATTTCTAACATAGTTTTAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATTGAACGAATAAAAGGGTCATGCCCTTGATTTAGCCATGTCAATAAAATCCTCAATTGTTGAACAAAGGGACAATGACGGTGTATTTGAGGAGTCAAGCCTCGATTATGAGGAGGCTGTTCGAGGGCTCCATAGACCTCAGGGGAGGCTCTATAGTGTACTTTGTTCAAGGAGTCAAGCCTCGATTAAGGGGAGGCTGTTCGAGGACTCCATAGGCCTCAGGGAAAGCTCATTCGAGGAGAGGATTATTGGGAGGGAGTACCAAGAAATGTTTATATAGTTTATAAATAATGAATACATCTTCATTGTTACGAGACCTTTTGGTAAGCCTAAAGTAAAGCTACTAGAGGTTATGCTGAAACTAGACAATATCATGTATTGTGGAGATCCGTGATTCTTAACCTATATTTTGCACAGGCGCTTCAGAGCGTAGGGTTGAGAAAGTTCGTGGTGGCAGGAGTGGGGCCGTTGGGCTGCATCCCGAACCAGAGGGCTTCTGGCGCAGCCACTCCAGGGCGGTGCGTTGATAATGTGAACAAGATGCTGGGGGCTTTCAACGAGGGGCTAAGATCGCTAGTAACCCAGCTGAACAGCCAGCACCCTGAATCCACCTTCGTCTACGTCAATGTGTATGCCATTTTTGGCGATATCTTGAACAACCCTGATACCTACGGTGAGAGATGATCGCCATTAATGGTTAGCTTAGCAGGGGGAAGTTATTAACTACATTAAAATGCAATGCAGGGTTTCGAGTTGTGGACACGGCGTGCTGTGGAGTAGGGCTAAACAGAGGGCAAATAACATGTTTGCCTCTGCAATTTCCATGCCTTTACAGGAATGAGTACGTGTTTTGGGATGCATTTCACCCAACAGAAGCAGCCTCCGCCATTCTTGCTGGTCGAGCTTTCAGAGGTCCACCCTCCGATTCCTACCCCATCAATGTCCGTCAGCTGGCCCTCATCTGAGCGCCGCCGTCGCCGTCGCCAAACCCTCTTTCATCACTCTTTCTTTCTAATATGTTGCTTTCTCATGTGAAAAAAGACCCAATGTAATCCCTATGAATATGTTGATCAATCTAGCTTGTTTCTTTTAAGAAGATT ATGACGCCACCTCGTTTGGCCGCCTCCGCCGCCCTGCTCCTCCTCCTAGTCGTCTTCCTCCGATGCTCGGACGAGACGGTTTCAGAGACAAATGGGGTTCCGGCGATTTTCGTGTTCGGCGACTCTCTTGTGGATGTTGGCAACAATAATTTTCTCCGATCAGTTGCTAGAGCCAATTATTATCCTTATGGGATTGATTTTCTTTCGGGTCCTACCGGGAGGTTTTCTAATGGACGAACCGTTATAGATATGTTTGTGGACATGTTTGGAATTCCGAACGCTCCGGAATTTGCGAATCCGAACACCACCGGAGTTGGAATACTCCACGGCGTCAACTATGCTTCGGCTGCTGCTGGAATCCTCGACGAGACTGGCAGACATTACGGCGAGAGGTACAGCCTGAGCCAGCAAGTGGTGAATTTTGAAAGCACTTTGAATGAGTTAAGGAGATCAATGGGGAGTTGGAATCTGAGTCGTTATTTATCAAAATCCTTAGCCTTTTTGAGGGCTTCTGGCGCAGCCACTCCAGGGCGGTGCGTTGATAATGTGAACAAGATGCTGGGGGCTTTCAACGAGGGGCTAAGATCGCTAGTAACCCAGCTGAACAGCCAGCACCCTGAATCCACCTTCGTCTACGTCAATGTGTATGCCATTTTTGGCGATATCTTGAACAACCCTGATACCTACGGGTTTCGAGTTGTGGACACGGCGTGCTGTGGAGTAGGGCTAAACAGAGGGCAAATAACATGTTTGCCTCTGCAATTTCCATGCCTTTACAGGAATGAGTACGTGTTTTGGGATGCATTTCACCCAACAGAAGCAGCCTCCGCCATTCTTGCTGGTCGAGCTTTCAGAGGTCCACCCTCCGATTCCTACCCCATCAATGTCCGTCAGCTGGCCCTCATCTGAGCGCCGCCGTCGCCGTCGCCAAACCCTCTTTCATCACTCTTTCTTTCTAATATGTTGCTTTCTCATGTGAAAAAAGACCCAATGTAATCCCTATGAATATGTTGATCAATCTAGCTTGTTTCTTTTAAGAAGATT ATGACGCCACCTCGTTTGGCCGCCTCCGCCGCCCTGCTCCTCCTCCTAGTCGTCTTCCTCCGATGCTCGGACGAGACGGTTTCAGAGACAAATGGGGTTCCGGCGATTTTCGTGTTCGGCGACTCTCTTGTGGATGTTGGCAACAATAATTTTCTCCGATCAGTTGCTAGAGCCAATTATTATCCTTATGGGATTGATTTTCTTTCGGGTCCTACCGGGAGGTTTTCTAATGGACGAACCGTTATAGATATGTTTGTGGACATGTTTGGAATTCCGAACGCTCCGGAATTTGCGAATCCGAACACCACCGGAGTTGGAATACTCCACGGCGTCAACTATGCTTCGGCTGCTGCTGGAATCCTCGACGAGACTGGCAGACATTACGGCGAGAGGTACAGCCTGAGCCAGCAAGTGGTGAATTTTGAAAGCACTTTGAATGAGTTAAGGAGATCAATGGGGAGTTGGAATCTGAGTCGTTATTTATCAAAATCCTTAGCCTTTTTGAGGGCTTCTGGCGCAGCCACTCCAGGGCGGTGCGTTGATAATGTGAACAAGATGCTGGGGGCTTTCAACGAGGGGCTAAGATCGCTAGTAACCCAGCTGAACAGCCAGCACCCTGAATCCACCTTCGTCTACGTCAATGTGTATGCCATTTTTGGCGATATCTTGAACAACCCTGATACCTACGGGTTTCGAGTTGTGGACACGGCGTGCTGTGGAGTAGGGCTAAACAGAGGGCAAATAACATGTTTGCCTCTGCAATTTCCATGCCTTTACAGGAATGAGTACGTGTTTTGGGATGCATTTCACCCAACAGAAGCAGCCTCCGCCATTCTTGCTGGTCGAGCTTTCAGAGGTCCACCCTCCGATTCCTACCCCATCAATGTCCGTCAGCTGGCCCTCATCTGA MTPPRLAASAALLLLLVVFLRCSDETVSETNGVPAIFVFGDSLVDVGNNNFLRSVARANYYPYGIDFLSGPTGRFSNGRTVIDMFVDMFGIPNAPEFANPNTTGVGILHGVNYASAAAGILDETGRHYGERYSLSQQVVNFESTLNELRRSMGSWNLSRYLSKSLAFLRASGAATPGRCVDNVNKMLGAFNEGLRSLVTQLNSQHPESTFVYVNVYAIFGDILNNPDTYGFRVVDTACCGVGLNRGQITCLPLQFPCLYRNEYVFWDAFHPTEAASAILAGRAFRGPPSDSYPINVRQLALI
BLAST of Cp4.1LG20g02720 vs. Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 5.2e-50 Identity = 87/134 (64.93%), Postives = 108/134 (80.60%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.0e-42 Identity = 89/152 (58.55%), Postives = 110/152 (72.37%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.0e-37 Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.8e-34 Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.0e-33 Identity = 65/123 (52.85%), Postives = 82/123 (66.67%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TrEMBL
Match: A0A087HHE5_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G143400 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 6.7e-89 Identity = 168/315 (53.33%), Postives = 215/315 (68.25%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TrEMBL
Match: A0A087HHE4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA2G143300 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 2.8e-79 Identity = 158/298 (53.02%), Postives = 193/298 (64.77%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TrEMBL
Match: B9RWB9_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1177180 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 6.3e-71 Identity = 154/325 (47.38%), Postives = 195/325 (60.00%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TrEMBL
Match: A0A103XYX2_CYNCS (Lipase, GDSL OS=Cynara cardunculus var. scolymus GN=Ccrd_022299 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 7.7e-69 Identity = 132/268 (49.25%), Postives = 178/268 (66.42%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TrEMBL
Match: A0A103V450_CYNCS (Lipase, GDSL OS=Cynara cardunculus var. scolymus GN=Ccrd_025729 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.9e-67 Identity = 134/309 (43.37%), Postives = 188/309 (60.84%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TAIR10
Match: AT1G71250.1 (AT1G71250.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 2.9e-51 Identity = 87/134 (64.93%), Postives = 108/134 (80.60%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TAIR10
Match: AT5G08460.1 (AT5G08460.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 175.3 bits (443), Expect = 5.9e-44 Identity = 89/152 (58.55%), Postives = 110/152 (72.37%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TAIR10
Match: AT1G29670.1 (AT1G29670.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 156.4 bits (394), Expect = 2.8e-38 Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TAIR10
Match: AT5G15720.1 (AT5G15720.1 GDSL-motif lipase 7) HSP 1 Score: 146.0 bits (367), Expect = 3.8e-35 Identity = 76/134 (56.72%), Postives = 94/134 (70.15%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. TAIR10
Match: AT5G45670.1 (AT5G45670.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34 Identity = 65/123 (52.85%), Postives = 82/123 (66.67%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. NCBI nr
Match: gi|674248782|gb|KFK41547.1| (hypothetical protein AALP_AA2G143400 [Arabis alpina]) HSP 1 Score: 335.5 bits (859), Expect = 9.6e-89 Identity = 168/315 (53.33%), Postives = 215/315 (68.25%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. NCBI nr
Match: gi|674248781|gb|KFK41546.1| (hypothetical protein AALP_AA2G143300 [Arabis alpina]) HSP 1 Score: 303.5 bits (776), Expect = 4.1e-79 Identity = 158/298 (53.02%), Postives = 193/298 (64.77%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. NCBI nr
Match: gi|223543020|gb|EEF44556.1| (zinc finger protein, putative [Ricinus communis]) HSP 1 Score: 275.8 bits (704), Expect = 9.1e-71 Identity = 154/325 (47.38%), Postives = 195/325 (60.00%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. NCBI nr
Match: gi|976913118|gb|KVH99468.1| (Lipase, GDSL [Cynara cardunculus var. scolymus]) HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68 Identity = 132/268 (49.25%), Postives = 178/268 (66.42%), Query Frame = 1
BLAST of Cp4.1LG20g02720 vs. NCBI nr
Match: gi|659067604|ref|XP_008440329.1| (PREDICTED: GDSL esterase/lipase At1g71250 [Cucumis melo]) HSP 1 Score: 268.5 bits (685), Expect = 1.4e-68 Identity = 133/161 (82.61%), Postives = 148/161 (91.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |