Cp4.1LG20g00760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g00760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMADS-box transcription factor
LocationCp4.1LG20 : 477882 .. 481111 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGGCGGAGGAGGGTTGAGAGAGAGAGANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGATGGTGACAGGCAAAAGGATACGTCACAGACAGTGGATCAGCCAATGAGAAATCGACAACGAATTAGAGGAAACCAAGGTGGTATTACAAAACCACCCATGTTGTTGAATTCCTTTGGTTTTGAATCAGTTTCATATTTTTGGTGTTGGTGTTGGTTTTGGTTTAGGGATTGGGAATGGGGAGGGGAAGAGTGCAGCTGAAGAGGATCGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTTTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTCGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCTTGGTATGTTCTTCCATTGCTCTTCATCAATACCACCCATGTTTCTTCTTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTATCAACAAAACCCAGCTCCCAAATTCCATTATCATTATTATTTTGGTTTTTCAGTATTATTATGCTCCAATCACTACATTGTCCTTTTCCTGTTTTTTTCTAGCTTTTCAGTACTTATGACCATAACCCAAAATGATTGGACCCATATTAGATTTCTCTTTTTTAGTGTTGATTATTGAACAAATGAAGAACAACCCTTTTGTTCCCTCCCCTTCTTGTTGCATTAACTAACTGGATGAACTTGAATTACTCTACGAATTTACTATTTAATCCACCATTTCAATCCCTCATAAATATTTGTATTTTTCTCGACATTATCATACTTTATTTTTGTAGTTCCAATATGGAGTAGGGATTCAAACTTTCGACTTTTGAGATAGAAAGCCACCGTCTCTTAACCTTGAGTTATAGGCGCTAAAAAAACAAGAAAAAGAAAGGGTTAAATATGATTTTATTTAAAGCAAAGAAAATGCCAAAAGCACTTTAATAAAGAAATTAAGTTATTTATTTATTCATTCATTTGTTTGAGAAAAAGAGAGATTGAATTATATTAGTTTACTATCAATAACTGATTGGAATTTATGTAAAACATGGACGAATGGAGTGTTGATATTGGATTGGCATTATTATTGTGTGTATAATGAATGAGTGTAGCTTTCATGAGCAGCATGGAGAAGATCCTTGAGCGTTATGAGAGGTACTCGTACGCGGAGAGGCGGCTTGTTGCAAATGATAGCCAATCAAACGTACGTACCAAACTCAACCCAACCTAACCCGTCTCGTCCCATCGAGTTGGTGGTGATTATAATGAAAAAGTTTGTGTGTTTAGGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGTAAAACTTAGCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTGTGGGAATGGTGTAAAGTTGGTTGGGATTTGCAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCACTCAAGCATGTAAGAGCCAGGAAGGTATGGATATGATGATTATGTTAGATTGGATTATTGTTCATCATTGTTATACACACTTCATCTCCATAACCTTTTCTTCTACAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGTAACCTTCTTTTTGTTGCCTTCACATCTCCAAAAATGCTTAATGATTCTACTATAAACTTGTTCAACTAATCCCACCAAACAACCATTTAACTCTATAATATTTGATCGTCACGAAACTTAGTACAATTGTAATCTTATAAAATTTTAGTTGAAGATAGGTTTTAAAATGATTTTAAACGTGACAAGAGTAGAGATGTCCATTTAACTTGCAAGACGCCCTCTCAAAAGGGGCGAAAAATGAGGAGTGAACGGAACAGGTAAAGATCTCTCCCTAATAGCTAAACATGGTCGAGGTTATTTTCTTTTTAATTTTGTTAGTAGAACATTGTATTAAATAGAAATTATTTTTTTGAAAAATGAACAAGAAGGAAAACAAGATAGCATTGTCCCATGGGCATCTCTAGCAGTCACAAACACACCCTTAAATCTCTTTACTTGGATTAATCTGATAGACATATATGGAATAACATTGATGGTGGAATTTATGTAACAATATGAATTTGGATCTGTAACAACAAGAACAATAACAACAATTTCATTATGTTGGCATGTTTGATCAGGACAAGGCGCTTCAGGACCAAAACAACATGTTAGCCAAGAAGGTAACTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTACCTTCATGCATGCACACACACACACACACGCACACACGCACACCATAATGTCCTTACTTAATTTATTTGCTTTCTTTTACTCTAAAACAATAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCACCACCACCAGCATAGCCATGCCATTGAACCTTCTCCACTTCTTCTTCCTCAGCCATTCCAATCTCTTGACATGCCGTTAGTATCCTAATTACAAACATTACATTGATTTAGATTAGGAGTTAACATCAACTGGGTTTGTTTACTTGTAGTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGGTCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTAAAATCATATACCACTACCTAATTCTTTTGCTGTATGAACCCTTTTGGATAATGGATGTTTGTGGAAGTTGTAGCTTTTTTAGTAAGTAATTTTCAGAAAAGGGTATAATGAGCTAAGAAGCATGGCAGGCTTGTGGGTTCCAAAATGAGACCTTTTTATAGAATAAGCCACACAGTGACATATGATTGTATATAGTTGTGTAAATGGCAGCCACTAACTAACGTCAGTACTCTAATTTACCAATATCTCTCCCTCTTCTTTCATTTTCTATTTCACAACATTACTATATTATTATATGTATGTGTAATGAATGATACACCCACCGTTAGTAGATATTTTCCGTTTTAGTTCGTTACGTATCAATGTCAGTCTCCACGATTTTAAAACGTGTATGTTAGAAGAGGTTTTCACACTCTTATTATAAGAAATGCTTTG

mRNA sequence

GAAGGCGGAGGAGGGTTGAGAGAGAGAGANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGATGGTGACAGGCAAAAGGATACGTCACAGACAGTGGATCAGCCAATGAGAAATCGACAACGAATTAGAGGAAACCAAGGGATTGGGAATGGGGAGGGGAAGAGTGCAGCTGAAGAGGATCGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTTTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTCGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCTTGCATGGAGAAGATCCTTGAGCGTTATGAGAGGTACTCGTACGCGGAGAGGCGGCTTGTTGCAAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCACTCAAGCATGTAAGAGCCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAACAACATTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGGTCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTAAAATCATATACCACTACCTAATTCTTTTGCTGTATGAACCCTTTTGGATAATGGATGTTTGTGGAAGTTGTAGCTTTTTTAGTAAGTAATTTTCAGAAAAGGGTATAATGAGCTAAGAAGCATGGCAGGCTTGTGGGTTCCAAAATGAGACCTTTTTATAGAATAAGCCACACAGTGACATATGATTGTATATAGTTGTGTAAATGGCAGCCACTAACTAACGTCAGTACTCTAATTTACCAATATCTCTCCCTCTTCTTTCATTTTCTATTTCACAACATTACTATATTATTATATGTATGTGTAATGAATGATACACCCACCGTTAGTAGATATTTTCCGTTTTAGTTCGTTACGTATCAATGTCAGTCTCCACGATTTTAAAACGTGTATGTTAGAAGAGGTTTTCACACTCTTATTATAAGAAATGCTTTG

Coding sequence (CDS)

ATGGGGAGGGGAAGAGTGCAGCTGAAGAGGATCGAGAACAAGATTAATATGCAAGTCACCTTCTCCAAGAGAAGGTCTGGTTTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTCGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGACTCTTGCATGGAGAAGATCCTTGAGCGTTATGAGAGGTACTCGTACGCGGAGAGGCGGCTTGTTGCAAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCACTCAAGCATGTAAGAGCCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAACAACATTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGGTCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTAA

Protein sequence

MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNICPYPTHATGHEESAANHDRSGTLLPPWMLGHHLGN
Homology
[Close]
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.6e-71
Identity = 135/166 (81.33%), Postives = 155/166 (93.37%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME++LERYERYS+AER+LV  D  S G+WTLE+AKLKAR+EVLQ+N +H++GEDLESL
Sbjct: 61  SCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNN 167
           ++KELQN+E QLDSALKH+R+RKNQLMHESIS LQK+D+ALQ+QNN
Sbjct: 121 NMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNN 166

[Close]
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.0e-70
Identity = 135/166 (81.33%), Postives = 153/166 (92.17%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEV LIVFSTKGKLFEY+ D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYS+AE++LV  D  S  +WTLE+ KLKAR+EVLQ+N +H++GEDLESL
Sbjct: 61  SCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNN 167
           S+KELQN+E QLDSALKH+R+RKNQLMHESIS LQKKD+ALQ+QNN
Sbjct: 121 SMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNN 166

[Close]
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-69
Identity = 128/167 (76.65%), Postives = 158/167 (94.61%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           S KELQN+EQQLD+ALKH+R+RKNQLMH+SI++LQ+K+KA+Q+QN++
Sbjct: 121 SSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSM 167

[Close]
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 129/167 (77.25%), Postives = 157/167 (94.01%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQKK+KA+Q+QN++
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSM 167

[Close]
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match: AP1_CITSI (Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69
Identity = 129/167 (77.25%), Postives = 157/167 (94.01%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQKK+KA+Q+QN++
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSM 167

[Close]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match: B9RLK4_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76
Identity = 157/241 (65.15%), Postives = 185/241 (76.76%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L+A D+++NG+WTLE+AKLKAR+EVLQ+N RHFMGE+L++L
Sbjct: 61  SCMERILERYERYSYAERQLLATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEELDTL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNN-------------- 180
           +LK+LQN+EQQ+DSALKHVR+RKNQLM+ESIS+LQKKDKALQ+QNN              
Sbjct: 121 TLKDLQNLEQQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNQLAKKVKEKEKAKA 180

Query: 181 -----------------ICPYP--------TH----ATGHEESAANHDRSGTLLPPWMLG 199
                            + P P        TH    +TG +E+   H+R+  LLP WML 
Sbjct: 181 QQTQWEQQNQGVDSSPVLLPQPIQSMNIRSTHPARGSTGEDETTPIHNRANALLPAWMLT 240

[Close]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match: A0A061FX88_THECC (AGAMOUS-like 8 isoform 1 OS=Theobroma cacao GN=TCM_014345 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-75
Identity = 157/237 (66.24%), Postives = 177/237 (74.68%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L  N+   NG+WTLE+AKLKAR+EVLQ+N RHFMGEDL++L
Sbjct: 61  SCMERILERYERYSYAERQLAGNEVDQNGSWTLEHAKLKARMEVLQRNQRHFMGEDLDNL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNIC------------ 180
           SL+ELQN+EQQLDSALKHVR+RKNQLM ESIS+LQKKDKALQ+QNN+             
Sbjct: 121 SLRELQNLEQQLDSALKHVRSRKNQLMFESISELQKKDKALQEQNNMLAKKVKEKEQAVA 180

Query: 181 -------------------------PYPTHATGHEE--SAANHDRSGTLLPPWMLGH 199
                                     Y   ++G EE  + A H  +  LLPPWM+ H
Sbjct: 181 QQAQWEQQNNCQDTSAILLPQPMSGTYEARSSGREEEGNPAQHRGANALLPPWMIRH 237

[Close]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match: Q39401_BETPN (MADS5 protein OS=Betula pendula GN=MADS5 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.2e-75
Identity = 156/241 (64.73%), Postives = 179/241 (74.27%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYA+R+L+AND + NG+WTLE+AKLKARIEVLQ+N +HF+GEDL+SL
Sbjct: 61  SCMERILERYERYSYADRQLLANDLEQNGSWTLEHAKLKARIEVLQRNQKHFVGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI------------- 180
           SLKELQN+EQQLDSALKH+R+RKNQLM+ESIS+LQ+KDKALQ+QNN+             
Sbjct: 121 SLKELQNLEQQLDSALKHIRSRKNQLMYESISELQRKDKALQEQNNVLAKKVKEKEKELA 180

Query: 181 ------------------CPYPTHAT------------GHEESAANHDRSGTLLPPWMLG 199
                              P P  ++            G  +      R+  LLPPWML 
Sbjct: 181 QQAQWEQQSHTLDSVPSLLPQPLQSSLNIGGSQQARGNGRVDEGTPPHRANALLPPWMLR 240

[Close]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match: A0A0D2PJM6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.7e-75
Identity = 157/237 (66.24%), Postives = 178/237 (75.11%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSSD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L AN+++  G+WTLE+AKLKAR+EVLQ+N RH+MGEDLE+L
Sbjct: 61  SCMERILERYERYSYAERQLAANENERTGSWTLEHAKLKARMEVLQRNQRHYMGEDLENL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI------------- 180
           SL+ELQN+E QLDSALKH+R+RKNQLM ESIS+LQKKDKALQ+QNN+             
Sbjct: 121 SLRELQNLEHQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNVLAKKEKEKEKEMT 180

Query: 181 --------------CPYP-----------THATGHEE---SAANHDRSGTLLPPWML 197
                          P P             + G EE   SAA H  S  LLPPWM+
Sbjct: 181 HQPQQNNCQDSSSMLPQPLQSLNISDTYEARSNGREEGNPSAAQHRNSNVLLPPWMI 237

[Close]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match: A0A0D2PSR8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.8e-75
Identity = 157/238 (65.97%), Postives = 178/238 (74.79%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSSD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L AN+++  G+WTLE+AKLKAR+EVLQ+N RH+MGEDLE+L
Sbjct: 61  SCMERILERYERYSYAERQLAANENERTGSWTLEHAKLKARMEVLQRNQRHYMGEDLENL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI------------- 180
           SL+ELQN+E QLDSALKH+R+RKNQLM ESIS+LQKKDKALQ+QNN+             
Sbjct: 121 SLRELQNLEHQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNVLAKKKEKEKEKEM 180

Query: 181 ---------------CPYP-----------THATGHEE---SAANHDRSGTLLPPWML 197
                           P P             + G EE   SAA H  S  LLPPWM+
Sbjct: 181 THQPQQNNCQDSSSMLPQPLQSLNISDTYEARSNGREEGNPSAAQHRNSNVLLPPWMI 238

[Close]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match: AT1G69120.1 (AT1G69120.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-70
Identity = 129/167 (77.25%), Postives = 157/167 (94.01%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVAL+VFS KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAER+L+A +S  N NW++EY +LKA+IE+L++N RH++GEDL+++
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           S KELQN+EQQLD+ALKH+R RKNQLM+ESI++LQKK+KA+Q+QN++
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSM 167

[Close]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match: AT5G60910.1 (AT5G60910.1 AGAMOUS-like 8)

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-68
Identity = 131/166 (78.92%), Postives = 150/166 (90.36%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFS+KGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERY+RY Y++++LV  D   + NW LE+AKLKAR+EVL+KN R+FMGEDL+SL
Sbjct: 61  SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNN 167
           SLKELQ++E QLD+A+K +R+RKNQ M ESIS LQKKDKALQD NN
Sbjct: 121 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNN 166

[Close]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match: AT1G26310.1 (AT1G26310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 246.1 bits (627), Expect = 1.8e-65
Identity = 120/169 (71.01%), Postives = 156/169 (92.31%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRV+LKRIENKIN QVTFSKRR+GLLKKA EISVLCDAEV+LIVFS KGKLFEYS++
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNG--NWTLEYAKLKARIEVLQKNHRHFMGEDLE 120
           SCMEK+LERYERYSYAER+L+A DS  N   NW++EY++LKA+IE+L++N RH++GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 SLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
            +SLK+LQN+EQQL++ALKH+R+RKNQLM+ES++ LQ+K+K +Q++N++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSM 169

[Close]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match: AT3G30260.1 (AT3G30260.1 AGAMOUS-like 79)

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-50
Identity = 108/201 (53.73%), Postives = 141/201 (70.15%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQL+RIENKI  QVTFSKRR+GL+KKA EISVLCDAEVALIVFS KGKLFEYS  
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           S ME+IL+RYER +YA + +   +  S G  + E +KL   I+VLQ++ RH  GE+++ L
Sbjct: 61  SSMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQD-QNNICPYPTHATGHEE 180
           S+++LQ +E QLD+ALK  R+RKNQLM ESI+ LQKK+K L++ +  +          + 
Sbjct: 121 SIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDFQT 180

Query: 181 SAANHDRSGTLLPPWMLGHHL 201
              +HD +    PP+   H L
Sbjct: 181 QNLSHDLASLATPPFESPHEL 201

[Close]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-42
Identity = 91/165 (55.15%), Postives = 121/165 (73.33%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRV+LKRIENKIN QVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           S M K L+RY++ SY    +    ++   N   EY KLK R E LQ+  R+ +GEDL  L
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQN 166
           + KEL+ +E+QLD +LK VR+ K Q M + +SDLQ K++ L + N
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETN 165

[Close]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match: gi|778657141|ref|XP_011650331.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 3.3e-85
Identity = 177/248 (71.37%), Postives = 186/248 (75.00%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKI  QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKIIRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAERRLVANDSQ NGNWTLE+AKLKARIEVLQKNHRHFMGEDL+SL
Sbjct: 61  SCMEKILERYERYSYAERRLVANDSQPNGNWTLEHAKLKARIEVLQKNHRHFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI------------- 180
           SLKELQNIEQQLDSALKH+RARKNQLMHESI++L+KK K LQ+ NNI             
Sbjct: 121 SLKELQNIEQQLDSALKHIRARKNQLMHESITELKKKGKVLQEHNNILGKKIKEKEKSRA 180

Query: 181 ----------------------CPYP-----------THATGHEESAANHDRSGTLLPPW 203
                                  P P           TH     ESA NH+RS TLLPPW
Sbjct: 181 HNPQMEQQQHQNSNVIESSPLLLPQPFQSLSMSCPYPTHGLEENESAPNHERSDTLLPPW 240

[Close]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match: gi|449439351|ref|XP_004137449.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 2.0e-82
Identity = 177/261 (67.82%), Postives = 186/261 (71.26%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKI  QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKIIRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SC-------------MEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQK 120
           SC             MEKILERYERYSYAERRLVANDSQ NGNWTLE+AKLKARIEVLQK
Sbjct: 61  SCEMNMSQNLNFHFSMEKILERYERYSYAERRLVANDSQPNGNWTLEHAKLKARIEVLQK 120

Query: 121 NHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 180
           NHRHFMGEDL+SLSLKELQNIEQQLDSALKH+RARKNQLMHESI++L+KK K LQ+ NNI
Sbjct: 121 NHRHFMGEDLDSLSLKELQNIEQQLDSALKHIRARKNQLMHESITELKKKGKVLQEHNNI 180

Query: 181 -----------------------------------CPYP-----------THATGHEESA 203
                                               P P           TH     ESA
Sbjct: 181 LGKKIKEKEKSRAHNPQMEQQQHQNSNVIESSPLLLPQPFQSLSMSCPYPTHGLEENESA 240

[Close]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match: gi|659066635|ref|XP_008453689.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCMEKILERYERYSYAERRLVANDSQSNGNWTLE+AKLKARIEVLQKNHRHFMGEDL+SL
Sbjct: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEHAKLKARIEVLQKNHRHFMGEDLDSL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           SLKELQNIEQQLDSALKH+RARKNQLMHESI++LQKK K LQ+ NN+
Sbjct: 121 SLKELQNIEQQLDSALKHIRARKNQLMHESITELQKKGKVLQEHNNM 167

[Close]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match: gi|659066633|ref|XP_008453619.1| (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-76
Identity = 156/180 (86.67%), Postives = 163/180 (90.56%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SC-------------MEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQK 120
           SC             MEKILERYERYSYAERRLVANDSQSNGNWTLE+AKLKARIEVLQK
Sbjct: 61  SCEMNMSQNLNFHFSMEKILERYERYSYAERRLVANDSQSNGNWTLEHAKLKARIEVLQK 120

Query: 121 NHRHFMGEDLESLSLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNNI 168
           NHRHFMGEDL+SLSLKELQNIEQQLDSALKH+RARKNQLMHESI++LQKK K LQ+ NN+
Sbjct: 121 NHRHFMGEDLDSLSLKELQNIEQQLDSALKHIRARKNQLMHESITELQKKGKVLQEHNNM 180

[Close]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match: gi|255547131|ref|XP_002514623.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis])

HSP 1 Score: 293.5 bits (750), Expect = 2.8e-76
Identity = 157/241 (65.15%), Postives = 185/241 (76.76%), Query Frame = 1 

Query: 1   MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
           MGRGRVQLKRIENKIN QVTFSKRR+GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SCMEKILERYERYSYAERRLVANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESL 120
           SCME+ILERYERYSYAER+L+A D+++NG+WTLE+AKLKAR+EVLQ+N RHFMGE+L++L
Sbjct: 61  SCMERILERYERYSYAERQLLATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEELDTL 120

Query: 121 SLKELQNIEQQLDSALKHVRARKNQLMHESISDLQKKDKALQDQNN-------------- 180
           +LK+LQN+EQQ+DSALKHVR+RKNQLM+ESIS+LQKKDKALQ+QNN              
Sbjct: 121 TLKDLQNLEQQIDSALKHVRSRKNQLMYESISELQKKDKALQEQNNQLAKKVKEKEKAKA 180

Query: 181 -----------------ICPYP--------TH----ATGHEESAANHDRSGTLLPPWMLG 199
                            + P P        TH    +TG +E+   H+R+  LLP WML 
Sbjct: 181 QQTQWEQQNQGVDSSPVLLPQPIQSMNIRSTHPARGSTGEDETTPIHNRANALLPAWMLT 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g00760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL8_SOLTU3.6e-7181.33Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1[more]
AGL8_SOLLC3.0e-7081.33Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 ... [more]
AP1_SINAL1.1e-6976.65Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1[more]
AP1_ARATH1.9e-6977.25Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2[more]
AP1_CITSI1.9e-6977.25Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2 SV=1[more]
BLAST of Cp4.1LG20g00760 vs. TrEMBL
Match NameE-valueIdentityDescription
B9RLK4_RICCO2.0e-7665.15Mads box protein, putative OS=Ricinus communis GN=RCOM_1468080 PE=4 SV=1[more]
A0A061FX88_THECC1.3e-7566.24AGAMOUS-like 8 isoform 1 OS=Theobroma cacao GN=TCM_014345 PE=4 SV=1[more]
Q39401_BETPN2.2e-7564.73MADS5 protein OS=Betula pendula GN=MADS5 PE=2 SV=1[more]
A0A0D2PJM6_GOSRA3.7e-7566.24Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1[more]
A0A0D2PSR8_GOSRA4.8e-7565.97Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075800 PE=4 SV=1[more]
BLAST of Cp4.1LG20g00760 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69120.11.1e-7077.25 K-box region and MADS-box transcription factor family protein [more]
AT5G60910.11.3e-6878.92 AGAMOUS-like 8[more]
AT1G26310.11.8e-6571.01 K-box region and MADS-box transcription factor family protein [more]
AT3G30260.12.2e-5053.73 AGAMOUS-like 79[more]
AT5G15800.22.8e-4255.15 K-box region and MADS-box transcription factor family protein [more]
BLAST of Cp4.1LG20g00760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778657141|ref|XP_011650331.1|3.3e-8571.37PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis sati... [more]
gi|449439351|ref|XP_004137449.1|2.0e-8267.82PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sati... [more]
gi|659066635|ref|XP_008453689.1|2.1e-7993.41PREDICTED: truncated transcription factor CAULIFLOWER A isoform X2 [Cucumis melo... [more]
gi|659066633|ref|XP_008453619.1|1.3e-7686.67PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis melo... [more]
gi|255547131|ref|XP_002514623.1|2.8e-7665.15PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002487TF_Kbox
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010154 fruit development
biological_process GO:0010077 maintenance of inflorescence meristem identity
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048731 system development
biological_process GO:0006950 response to stress
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g00760.1Cp4.1LG20g00760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 1.7E-30coord: 23..38
score: 1.7E-30coord: 38..59
score: 1.7
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 4.4
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 1.2
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 31
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..90
score: 8.24
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 84..166
score: 3.3
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 88..179
score: 15
NoneNo IPR availableunknownCoilCoilcoord: 88..108
score: -coord: 122..145
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..166
score: 1.1E
NoneNo IPR availablePANTHERPTHR11945:SF166SUBFAMILY NOT NAMEDcoord: 2..166
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g00760Cucsa.113430Cucumber (Gy14) v1cgycpeB0257
Cp4.1LG20g00760CmaCh13G010580Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g00760CmaCh18G000200Cucurbita maxima (Rimu)cmacpeB446
Cp4.1LG20g00760CmoCh13G011030Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g00760CmoCh18G000190Cucurbita moschata (Rifu)cmocpeB406
Cp4.1LG20g00760Cla018544Watermelon (97103) v1cpewmB523
Cp4.1LG20g00760Csa1G039910Cucumber (Chinese Long) v2cpecuB505
Cp4.1LG20g00760MELO3C002050Melon (DHL92) v3.5.1cpemeB478
Cp4.1LG20g00760ClCG04G011600Watermelon (Charleston Gray)cpewcgB471
Cp4.1LG20g00760CSPI01G06350Wild cucumber (PI 183967)cpecpiB505
Cp4.1LG20g00760MELO3C026299.2Melon (DHL92) v3.6.1cpemedB570
Cp4.1LG20g00760MELO3C002050.2Melon (DHL92) v3.6.1cpemedB560
Cp4.1LG20g00760CsaV3_1G006220Cucumber (Chinese Long) v3cpecucB0623
Cp4.1LG20g00760CsaV3_4G010080Cucumber (Chinese Long) v3cpecucB0646
Cp4.1LG20g00760Bhi08G000888Wax gourdcpewgoB0652
Cp4.1LG20g00760CsGy4G009550Cucumber (Gy14) v2cgybcpeB538
Cp4.1LG20g00760CsGy1G006040Cucumber (Gy14) v2cgybcpeB069
Cp4.1LG20g00760Carg22770Silver-seed gourdcarcpeB0724
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g00760Cp4.1LG09g11490Cucurbita pepo (Zucchini)cpecpeB047
Cp4.1LG20g00760Cp4.1LG02g13950Cucurbita pepo (Zucchini)cpecpeB438
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g00760Wax gourdcpewgoB0667
Cp4.1LG20g00760Cucurbita pepo (Zucchini)cpecpeB049
Cp4.1LG20g00760Cucurbita pepo (Zucchini)cpecpeB349
Cp4.1LG20g00760Cucurbita pepo (Zucchini)cpecpeB442
Cp4.1LG20g00760Cucumber (Gy14) v1cgycpeB0558
Cp4.1LG20g00760Cucurbita maxima (Rimu)cmacpeB084
Cp4.1LG20g00760Cucurbita maxima (Rimu)cmacpeB139
Cp4.1LG20g00760Cucurbita maxima (Rimu)cmacpeB439
Cp4.1LG20g00760Cucurbita moschata (Rifu)cmocpeB059
Cp4.1LG20g00760Cucurbita moschata (Rifu)cmocpeB116
Cp4.1LG20g00760Cucurbita moschata (Rifu)cmocpeB404
Cp4.1LG20g00760Wild cucumber (PI 183967)cpecpiB509
Cp4.1LG20g00760Wild cucumber (PI 183967)cpecpiB512
Cp4.1LG20g00760Cucumber (Chinese Long) v2cpecuB509
Cp4.1LG20g00760Bottle gourd (USVL1VR-Ls)cpelsiB418
Cp4.1LG20g00760Bottle gourd (USVL1VR-Ls)cpelsiB432
Cp4.1LG20g00760Watermelon (Charleston Gray)cpewcgB475
Cp4.1LG20g00760Watermelon (97103) v1cpewmB529
Cp4.1LG20g00760Melon (DHL92) v3.5.1cpemeB483
Cp4.1LG20g00760Cucumber (Gy14) v2cgybcpeB073
Cp4.1LG20g00760Cucumber (Gy14) v2cgybcpeB089
Cp4.1LG20g00760Melon (DHL92) v3.6.1cpemedB568
Cp4.1LG20g00760Silver-seed gourdcarcpeB0544
Cp4.1LG20g00760Silver-seed gourdcarcpeB0647
Cp4.1LG20g00760Silver-seed gourdcarcpeB0725
Cp4.1LG20g00760Silver-seed gourdcarcpeB0846
Cp4.1LG20g00760Cucumber (Chinese Long) v3cpecucB0627
Cp4.1LG20g00760Cucumber (Chinese Long) v3cpecucB0642