Carg22770 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCCTTTTTCTCCACAAACAAAGTCCAACATTATTGAGGTTGGTTTCATGTGGTTTGCGTTGTTATTTTTGATGTGTTGATTCCATTTTTGAAGTAAGGGAATGAAGTGATCTTGGTTTTGTTGGTGGAAATGGGACGAGGGCGAGTGCAGTTGAAGAGGATTGAGAACAAGATCAATCGCCAAGTTACTTTCTCTAAAAGAAGGTCCGGTTTGCTGAAGAAAGCCCATGAGATTTCAGTTCTTTGTGATGCCGAAGTTGCTCTTATTGTCTTCTCCACCAAGGGCAAGCTCTTTGAATACTCCACTGATTCATGGTATTTTCCCTTGTCCTTCTTTCAGCTTCCCCTCACTTGTTCTACTTCTATGCTTATTTCTGCCTTCAACTTTGAATACCCATGTTGCTTCTCTGCTTACAAGAGTCTTAAACTTCGTTTTTCAATCGTTGTTTGGATGTGTTTTTCTGTACAACTTAGGTCCCTGTCCCTCTTGATGCACTTGTTGTATCATTGGATGAACCTGAACAACTATCACCAAACTTTAATATATACTATTGTATTGTGTGGGTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTAGTGATTGAAGTGTGGGTTTAATGTAATATGCTGTGAATAATGACGCATGCCAATGTAGCAACGGCATCACTTATGGGTTCTACAGCAGAATGTTTTGCTTTTTAATGATTTCCAATCATGAACACAACTAACTTTTTAAGATTCTAAATGTTAGTGTTAATGAATGTAACATTATGGGCAGCATGGAGAAAATCCTGGAACGCTATGAAAGGTACTCCTATGCAGAAAGGAGACTTATTGCAAATGATAACCAATCAAATGTACGAACAACACCCATGATCCCATTACGCAATTTCATTCTAAAATTTCAATCAATTATGAAATTTCGCTTTGTTTATAGGGAAATTGGAGTCTTGAACATGCAAAGCTCAAAGCCAGGGTAGAGGTTCTACAGAAAAACCACAGGTTCTAAATCTCTTTCTCCTCTTTTGGATGATTGTTTTTTTTGTTGTAATTGGAAGTAGCCAAGGCTTAATCCAGAACTTGGTTGAATTTGCAGGCATTTCATGGGGGAAGATCTTGACTCCTTGGCTCTAAAAGAGCTTCAAAATATTGAACAACAACTTGATTCTGCACTCAAACAAATAAGAGCTAGGAAGGTATTTTCAAGTATTTTAATTGCTATATTTTGAATTCCATTATTTTGTCCAACATTATTGGAATAGGTTTTGCTGACTGCATTCCAAAACCTTCTCTCCTACAGAACCAACTCATGCATGAATCCATTTCAGAGCTTCAGAAAAAGGTAATCTTATACTTGCTTTCTTCTCAGCTGTTTTTCTATTTTTTTTTTTTTTTTTCCCAATTTTTGGGCCAATCACTAATTAAAAAAAAAAAAAAAAAAAACAGGTTTATTAAGACATTCATTAATGTGTGTTTAATAAATGTCAAAACGCCTATTATACTAATAAATGTTTGATATGTGTCCAATACGTGTCAAAGATATTCGATATGTTGTATCGAATACAAATGCTCTACCCAAACTAGAAGGGTCTCTCCATAGAGATTGAACTCATTTCTTATAAGTACATTTACATTTTTTTCTTTTTTCTTTTTTTTTTTTACGAGCCTAATGAGTATGGAGCCAATTTGTGATGAAAGTTGTAGAATTTTAGTCCTACTTGGCACCATGAATTCAAACCAACATGAATTTGGATCAACAACAAGGAACAAGTTTGAGTTTTTCTCAGTTTTGTGTCCTATATATCACTTCAAGCTTCAAGCTTGAATGTGCATAAATTTTTAGTTAAAATGATGAAGCCAACATGAGAGAGTAAGTGAAGAAGATTTGTATGGGTTAAATTAATTTGCGTTGTTTGATCAGGACAAGGCCCTACAGGAGCAAAACAACATGTTAGCCAAGAAGGTAATGTTTTTTTTTTACCTTCGTATATGCATACAACTGTAGAATTAGACCACACAATGATCTACTTCTCTAATCATTTGGTTTCAAAAAATATATATAAATAGATAAAAGAGAAGGAAAAAGCACAAGCTCAAAATCCACCATCGGAGCAGCAGCAGGAGTATAGCCATGGCGTTTCCCCGCTTCTCCTACCTCAGCCATTCCCATCTCTTGCCATGACCACGAGAGACAAAGACGTGGCTGCCAACTACGATAGATCGGCAGCCCTCCTGCCGCCGTGGATGCTCGGGCACCACCTTGGTGACTAACATGATACACACATATATGATATATGATAAAAGACGTATGTATAATTGTAAAGCCCTGTATGTAAGATATGATATGGTAGCAGTAGAACCTAATTGTTCAGGTGTATGAAGCCTTTGGATTGGATCCTTTTGAAAGTTGTAGGTTTTAGTAAGCCATAATTAAGAAAAGAGTATAATGGGAAAGAAGCATGCAGGCTTTTTGGCTCCAAAATGAGACATTATGACTGTATATACATCTGTAACTCTGCCACTTTTTTTATAATAAACAAAAACAGCCTTATTGCATTTCTCCTCCATATGTTTAGTAAATAAACAACCTTCCATGCTTTCGTTTACGGGCCATTTTCGAATCATTTTTCATACTATTAATACTTTTTTTCCTATTTGAAACAAGGGTCATAGGATCCTTCAGAAAAGTTTTTTCTCGTATTAGTCTATTAATAAATTCACT CTTTCCTTTTTCTCCACAAACAAAGTCCAACATTATTGAGGTTGGTTTCATGTGGTTTGCGTTGTTATTTTTGATGTGTTGATTCCATTTTTGAAGTAAGGGAATGAAGTGATCTTGGTTTTGTTGGTGGAAATGGGACGAGGGCGAGTGCAGTTGAAGAGGATTGAGAACAAGATCAATCGCCAAGTTACTTTCTCTAAAAGAAGGTCCGGTTTGCTGAAGAAAGCCCATGAGATTTCAGTTCTTTGTGATGCCGAAGTTGCTCTTATTGTCTTCTCCACCAAGGGCAAGCTCTTTGAATACTCCACTGATTCATGCATGGAGAAAATCCTGGAACGCTATGAAAGGTACTCCTATGCAGAAAGGAGACTTATTGCAAATGATAACCAATCAAATGGAAATTGGAGTCTTGAACATGCAAAGCTCAAAGCCAGGGTAGAGGTTCTACAGAAAAACCACAGGCATTTCATGGGGGAAGATCTTGACTCCTTGGCTCTAAAAGAGCTTCAAAATATTGAACAACAACTTGATTCTGCACTCAAACAAATAAGAGCTAGGAAGAACCAACTCATGCATGAATCCATTTCAGAGCTTCAGAAAAAGGACAAGGCCCTACAGGAGCAAAACAACATGTTAGCCAAGAAGATAAAAGAGAAGGAAAAAGCACAAGCTCAAAATCCACCATCGGAGCAGCAGCAGGAGTATAGCCATGGCGTTTCCCCGCTTCTCCTACCTCAGCCATTCCCATCTCTTGCCATGACCACGAGAGACAAAGACGTGGCTGCCAACTACGATAGATCGGCAGCCCTCCTGCCGCCGTGGATGCTCGGGCACCACCTTGGTGACTAACATGATACACACATATATGATATATGATAAAAGACGTATGTATAATTGTAAAGCCCTGTATGTAAGATATGATATGGTAGCAGTAGAACCTAATTGTTCAGGTGTATGAAGCCTTTGGATTGGATCCTTTTGAAAGTTGTAGGTTTTAGTAAGCCATAATTAAGAAAAGAGTATAATGGGAAAGAAGCATGCAGGCTTTTTGGCTCCAAAATGAGACATTATGACTGTATATACATCTGTAACTCTGCCACTTTTTTTATAATAAACAAAAACAGCCTTATTGCATTTCTCCTCCATATGTTTAGTAAATAAACAACCTTCCATGCTTTCGTTTACGGGCCATTTTCGAATCATTTTTCATACTATTAATACTTTTTTTCCTATTTGAAACAAGGGTCATAGGATCCTTCAGAAAAGTTTTTTCTCGTATTAGTCTATTAATAAATTCACT ATGGGACGAGGGCGAGTGCAGTTGAAGAGGATTGAGAACAAGATCAATCGCCAAGTTACTTTCTCTAAAAGAAGGTCCGGTTTGCTGAAGAAAGCCCATGAGATTTCAGTTCTTTGTGATGCCGAAGTTGCTCTTATTGTCTTCTCCACCAAGGGCAAGCTCTTTGAATACTCCACTGATTCATGCATGGAGAAAATCCTGGAACGCTATGAAAGGTACTCCTATGCAGAAAGGAGACTTATTGCAAATGATAACCAATCAAATGGAAATTGGAGTCTTGAACATGCAAAGCTCAAAGCCAGGGTAGAGGTTCTACAGAAAAACCACAGGCATTTCATGGGGGAAGATCTTGACTCCTTGGCTCTAAAAGAGCTTCAAAATATTGAACAACAACTTGATTCTGCACTCAAACAAATAAGAGCTAGGAAGAACCAACTCATGCATGAATCCATTTCAGAGCTTCAGAAAAAGGACAAGGCCCTACAGGAGCAAAACAACATGTTAGCCAAGAAGATAAAAGAGAAGGAAAAAGCACAAGCTCAAAATCCACCATCGGAGCAGCAGCAGGAGTATAGCCATGGCGTTTCCCCGCTTCTCCTACCTCAGCCATTCCCATCTCTTGCCATGACCACGAGAGACAAAGACGTGGCTGCCAACTACGATAGATCGGCAGCCCTCCTGCCGCCGTGGATGCTCGGGCACCACCTTGGTGACTAA MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMEKILERYERYSYAERRLIANDNQSNGNWSLEHAKLKARVEVLQKNHRHFMGEDLDSLALKELQNIEQQLDSALKQIRARKNQLMHESISELQKKDKALQEQNNMLAKKIKEKEKAQAQNPPSEQQQEYSHGVSPLLLPQPFPSLAMTTRDKDVAANYDRSAALLPPWMLGHHLGD
BLAST of Carg22770 vs. NCBI nr
Match: XP_022955286.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata]) HSP 1 Score: 446.8 bits (1148), Expect = 4.6e-122 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of Carg22770 vs. NCBI nr
Match: XP_022994529.1 (truncated transcription factor CAULIFLOWER A-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 402.5 bits (1033), Expect = 9.8e-109 Identity = 223/245 (91.02%), Postives = 223/245 (91.02%), Query Frame = 0
BLAST of Carg22770 vs. NCBI nr
Match: XP_022994530.1 (truncated transcription factor CAULIFLOWER A-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108 Identity = 220/238 (92.44%), Postives = 220/238 (92.44%), Query Frame = 0
BLAST of Carg22770 vs. NCBI nr
Match: XP_023543013.1 (truncated transcription factor CAULIFLOWER A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.0 bits (1016), Expect = 9.2e-107 Identity = 222/247 (89.88%), Postives = 223/247 (90.28%), Query Frame = 0
BLAST of Carg22770 vs. NCBI nr
Match: XP_023543012.1 (truncated transcription factor CAULIFLOWER A-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-106 Identity = 222/249 (89.16%), Postives = 222/249 (89.16%), Query Frame = 0
BLAST of Carg22770 vs. TAIR10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 276.2 bits (705), Expect = 1.9e-74 Identity = 143/202 (70.79%), Postives = 171/202 (84.65%), Query Frame = 0
BLAST of Carg22770 vs. TAIR10
Match: AT5G60910.1 (AGAMOUS-like 8) HSP 1 Score: 272.3 bits (695), Expect = 2.8e-73 Identity = 156/241 (64.73%), Postives = 180/241 (74.69%), Query Frame = 0
BLAST of Carg22770 vs. TAIR10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 252.3 bits (643), Expect = 3.0e-67 Identity = 131/206 (63.59%), Postives = 172/206 (83.50%), Query Frame = 0
BLAST of Carg22770 vs. TAIR10
Match: AT3G30260.1 (AGAMOUS-like 79) HSP 1 Score: 204.9 bits (520), Expect = 5.5e-53 Identity = 124/243 (51.03%), Postives = 156/243 (64.20%), Query Frame = 0
BLAST of Carg22770 vs. TAIR10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42 Identity = 94/174 (54.02%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of Carg22770 vs. Swiss-Prot
Match: sp|P35631|AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana OX=3702 GN=AP1 PE=1 SV=2) HSP 1 Score: 276.2 bits (705), Expect = 3.5e-73 Identity = 143/202 (70.79%), Postives = 171/202 (84.65%), Query Frame = 0
BLAST of Carg22770 vs. Swiss-Prot
Match: sp|Q38876|AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana OX=3702 GN=AGL8 PE=1 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.0e-72 Identity = 156/241 (64.73%), Postives = 180/241 (74.69%), Query Frame = 0
BLAST of Carg22770 vs. Swiss-Prot
Match: sp|A2IB53|AP1_CITSI (Floral homeotic protein APETALA 1 OS=Citrus sinensis OX=2711 GN=AP1 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-71 Identity = 142/202 (70.30%), Postives = 169/202 (83.66%), Query Frame = 0
BLAST of Carg22770 vs. Swiss-Prot
Match: sp|Q41276|AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba OX=3728 GN=AP1 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 3.3e-71 Identity = 135/174 (77.59%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Carg22770 vs. Swiss-Prot
Match: sp|Q96356|2AP1_BRAOT (Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var. italica OX=36774 GN=2AP1 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 7.3e-71 Identity = 134/174 (77.01%), Postives = 165/174 (94.83%), Query Frame = 0
BLAST of Carg22770 vs. TrEMBL
Match: tr|A0A1S3BWY5|A0A1S3BWY5_CUCME (truncated transcription factor CAULIFLOWER A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494248 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 9.4e-100 Identity = 198/248 (79.84%), Postives = 209/248 (84.27%), Query Frame = 0
BLAST of Carg22770 vs. TrEMBL
Match: tr|A0A1S3BWS7|A0A1S3BWS7_CUCME (truncated transcription factor CAULIFLOWER A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494248 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 5.7e-97 Identity = 198/261 (75.86%), Postives = 209/261 (80.08%), Query Frame = 0
BLAST of Carg22770 vs. TrEMBL
Match: tr|Q39401|Q39401_BETPN (MADS5 protein OS=Betula pendula OX=3505 GN=MADS5 PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 7.2e-84 Identity = 174/242 (71.90%), Postives = 194/242 (80.17%), Query Frame = 0
BLAST of Carg22770 vs. TrEMBL
Match: tr|A0A061FX88|A0A061FX88_THECC (AGAMOUS-like 8 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_014345 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 8.0e-83 Identity = 170/238 (71.43%), Postives = 193/238 (81.09%), Query Frame = 0
BLAST of Carg22770 vs. TrEMBL
Match: tr|A0A0D4ZY39|A0A0D4ZY39_PYRPY (AP1 MADS-box protein OS=Pyrus pyrifolia OX=3767 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82 Identity = 173/252 (68.65%), Postives = 191/252 (75.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |