Cp4.1LG19g03190 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCTTGGCACGTAGTTCATTATCATTTTGAAACGCCAAAAGTTAATTTAATCGCTGCATTGCATCTGCCATTCAAGAACCCTCGTTTGAGGAACGCAAAGCTTCAATCCTCGGGACCATGGGTGCTTTGTTGAGCTCTAATCAATGTCAATGGCGGACGGAGGCTTTCCCTGTCTCCTACTTCATGTGTTTATCCACAAAGTAATCATGATTTAAATTCACCGCCCTCTTTCTTTCATTCTTTCTTTATTTGTTGTTTGTTTTAACCGTTTGTACATACCCTTTTCATTATTGGGCATGGTTGATTTGTGATGAAACCTTTTGGATGGAGCTTTAAATCGACCCTTCAATTCTAAGAGTGGCCCTAAATCATTACCAACTCCATTTTCTTTGATTTGGCTTTCTGGGTGTTGGAATCTCCATCGGAATTTGTGTTTTGAGCTTAATTTGCAGAAGGGTTTGGATTAATAAGGCTTCTAGTGGGTGGATTCGAAGTGGGTTGCTTTGATTTTGTGCTATGGTTGTGATTGAAGAACGGAAATTGTAATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGGTAATTTTAGCCCTCTTTTATTTGTGGGGTTTCTCTATATAAACTGTATTGATCTTTTAATGCTGTGTGGGGGATTACAGAGGTTGAGATGTTGAAGGAAAGATTTTCTAAACTGCTACTCGGAGAAGATATGTCAGGCTGCGGAAATGGGGTTTGTACGGCGTTGGCTATATCGAATGCCATTACAAATCTTTGTGGTATGCTTTGACTCATTGATATTCTATCTAAGATTGACATTGGTAGACACTGATTCCCTTTGCCATTGTTTTGTTATAGCCACTCTGTTTGGGCAACTGTGGCGATTAGAGCCTATTTCAGAAGAGAAGAAAGTGCGGTGGCGAAGGGAGATGGATTGGCTTCTTTGTGTTAGCGATCATATTGTCGAGTTCACGCCTACTTGGCAGACGTTTCTTGATGGAAGCAAGCATGAGGTACTGAATAACTTCAAACAGGCTTGTTATGGCTGTATGGGTTTTGTTCGAATTGCCTGTTGCCTTCCATATTGTTTGTTCATATATAAACGCTAAGTAAATTTGTACAAACACAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGTAAGAACAGGCCTGCATCGAGAACGTGAAAACGGGAGAGTTTATATGTTTATGTATTTGTAAAGCATCAATTTTTTGATGGGGGTTTTTTTTTTTATGATCCTTCAGGTTATGACATGCAAACAACGGTCGGATCTTTATGTGAATCTTCCTGCTCTTCGGAAACTGGACAACATGCTTCTTGTATGATTCACCAATGTCTACTCGTCTCTGTGTTACAAACGTTTGAGATTTGTTCTAAATTTGGTAAAATAAACTTTGTGCAGGAAATATTAGATAGTTTTGAAGTTTGTGAGTTCTGGTATGTTGATCAAGGGATACACGGCCCTGAGACTGATGGGTCTTCCTCTTTCCATAGAGTGCTACAGCGTCAAGAAGATAAATGGTGGCTTCCCGTGCCTCGAGTTCCTCCGGGTGGTCTCCAGGAAGACTCAAGAAAGCAACTGCAACAAAAGCGCGACAGCACAAACCAGATATTAAAAGCTGCAATTGCAATTAACAGTGCTACTTTGGCTGATCTCGAAATTCCCGAACCGTATCTCGAAGCCTTACCGAAGGTACGAGATGCTTGAATTGTTACAATTCTGATATCTAAAGCAGTGTGTGATTTTCTAATCTTTTATTCCATTTGGTTTCTCAGAATGGAAGAGCCTGTTTGGGAGATCTCATATATCGATATATTTCATCAGATCAATTCTCTCCTCAATGTTTACTTGACTGCCTTGAAATGTCATCTGAACATCAAGCTACGGAGATCGCTAACCGGGTCGAGGCTTCTATCTACGTATGGCGAAAAAGAACGAGCTCAAAACCTGCTATGAACTCCATCAAACACAGTTCAAAATCGTCATGGGAAATGGTGAAGGAGCTGATGGTCGACTCGGAGAAAATGGAGCTGCTAGCAGAGAGAGCAGAAACTCTATTGCTTTGCCTGAAGCAACGGTTTCCTGGTCTTCCACAGACAACCTTAGATATGAACAAGATCCAGTACAATAAGGTTTGTCCCTACTGGAACCTTTTAACATTTCCAATGAGCTTAACACATAGTAACTTTAGTAGGTAATGTCTGTTTTGATCGTTTAGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGAGAGTAAAATCCAAGCTTGGTTTTCATGGCTGTATGTTTTCCAGTTGAATTTGTCAGTTTTGTGGATTTCTTTTTGTATGTATAGAATGTAATGTATATTTGGTCTTCAATTTGGTTGTATTTGTGTTGATGAGGAATCAAATGCTCCGCCTTCAAAGTAATACATACGTGCTTATTAATCACTGCACCATTAAAAGTCTTTTGGCAATCCTTTCTTAATTTGTTCTGATTGA TCCCTTGGCACGTAGTTCATTATCATTTTGAAACGCCAAAAGTTAATTTAATCGCTGCATTGCATCTGCCATTCAAGAACCCTCGTTTGAGGAACGCAAAGCTTCAATCCTCGGGACCATGGGTGCTTTGTTGAGCTCTAATCAATGTCAATGGCGGACGGAGGCTTTCCCTGTCTCCTACTTCATGTGTTTATCCACAAAGTAATCATGATTTAAATTCACCGCCCTCTTTCTTTCATTCTTTCTTTATTTGTTGTTTGTTTTAACCGTTTGTACATACCCTTTTCATTATTGGGCATGGTTGATTTGTGATGAAACCTTTTGGATGGAGCTTTAAATCGACCCTTCAATTCTAAGAGTGGCCCTAAATCATTACCAACTCCATTTTCTTTGATTTGGCTTTCTGGGTGTTGGAATCTCCATCGGAATTTGTGTTTTGAGCTTAATTTGCAGAAGGGTTTGGATTAATAAGGCTTCTAGTGGGTGGATTCGAAGTGGGTTGCTTTGATTTTGTGCTATGGTTGTGATTGAAGAACGGAAATTGTAATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGAGAGTAAAATCCAAGCTTGGTTTTCATGGCTGTATGTTTTCCAGTTGAATTTGTCAGTTTTGTGGATTTCTTTTTGTATGTATAGAATGTAATGTATATTTGGTCTTCAATTTGGTTGTATTTGTGTTGATGAGGAATCAAATGCTCCGCCTTCAAAGTAATACATACGTGCTTATTAATCACTGCACCATTAAAAGTCTTTTGGCAATCCTTTCTTAATTTGTTCTGATTGA ATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGA MDESVVEKSQGIGHIVPENEMFSHLIEEHGRESSSSSDFLTSETTGGLEEHSHSGSEDSSPPYLLSWSTRKAYRPDCIRPNVADKEEKNFVDNRKVEKNVSSSSDQKRQRSILSFGLYVRVGFFVQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLGVMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPAKTTQRGFGIRKVLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFPSPEQGSFA
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF5_ARATH (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana GN=ROPGEF5 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.8e-21 Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF7_ARATH (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana GN=ROPGEF7 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15 Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF1_ARATH (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROFG6_ARATH (Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana GN=ROPGEF6 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10 Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF3_ARATH (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A0A0KXQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303120 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54 Identity = 119/166 (71.69%), Postives = 131/166 (78.92%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: M5VXJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002319mg PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38 Identity = 92/147 (62.59%), Postives = 110/147 (74.83%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A061ESK3_THECC (RHO guanyl-nucleotide exchange factor 7 OS=Theobroma cacao GN=TCM_021824 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34 Identity = 87/144 (60.42%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: B9HC61_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s09370g PE=4 SV=2) HSP 1 Score: 149.8 bits (377), Expect = 5.0e-33 Identity = 92/168 (54.76%), Postives = 112/168 (66.67%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A151QTL3_CAJCA (Rop guanine nucleotide exchange factor 1 OS=Cajanus cajan GN=KK1_045520 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32 Identity = 87/170 (51.18%), Postives = 113/170 (66.47%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT5G05940.1 (AT5G05940.1 ROP guanine nucleotide exchange factor 5) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22 Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT5G02010.1 (AT5G02010.1 RHO guanyl-nucleotide exchange factor 7) HSP 1 Score: 84.7 bits (208), Expect = 9.9e-17 Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT4G38430.1 (AT4G38430.1 rho guanyl-nucleotide exchange factor 1) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13 Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT3G55660.1 (AT3G55660.1 ROP (rho of plants) guanine nucleotide exchange factor 6) HSP 1 Score: 68.9 bits (167), Expect = 5.6e-12 Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT4G00460.2 (AT4G00460.2 RHO guanyl-nucleotide exchange factor 3) HSP 1 Score: 58.5 bits (140), Expect = 7.6e-09 Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|659069194|ref|XP_008448594.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 5.1e-55 Identity = 123/172 (71.51%), Postives = 136/172 (79.07%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|449460361|ref|XP_004147914.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 119/166 (71.69%), Postives = 131/166 (78.92%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|595822881|ref|XP_007204968.1| (hypothetical protein PRUPE_ppa002319mg [Prunus persica]) HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38 Identity = 92/147 (62.59%), Postives = 110/147 (74.83%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|694408379|ref|XP_009378875.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Pyrus x bretschneideri]) HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37 Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 1
BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|645220407|ref|XP_008240123.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Prunus mume]) HSP 1 Score: 163.7 bits (413), Expect = 4.8e-37 Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |