Cp4.1LG19g03190 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG19g03190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRop guanine nucleotide exchange factor 1
LocationCp4.1LG19 : 2808028 .. 2811299 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCTTGGCACGTAGTTCATTATCATTTTGAAACGCCAAAAGTTAATTTAATCGCTGCATTGCATCTGCCATTCAAGAACCCTCGTTTGAGGAACGCAAAGCTTCAATCCTCGGGACCATGGGTGCTTTGTTGAGCTCTAATCAATGTCAATGGCGGACGGAGGCTTTCCCTGTCTCCTACTTCATGTGTTTATCCACAAAGTAATCATGATTTAAATTCACCGCCCTCTTTCTTTCATTCTTTCTTTATTTGTTGTTTGTTTTAACCGTTTGTACATACCCTTTTCATTATTGGGCATGGTTGATTTGTGATGAAACCTTTTGGATGGAGCTTTAAATCGACCCTTCAATTCTAAGAGTGGCCCTAAATCATTACCAACTCCATTTTCTTTGATTTGGCTTTCTGGGTGTTGGAATCTCCATCGGAATTTGTGTTTTGAGCTTAATTTGCAGAAGGGTTTGGATTAATAAGGCTTCTAGTGGGTGGATTCGAAGTGGGTTGCTTTGATTTTGTGCTATGGTTGTGATTGAAGAACGGAAATTGTAATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGGTAATTTTAGCCCTCTTTTATTTGTGGGGTTTCTCTATATAAACTGTATTGATCTTTTAATGCTGTGTGGGGGATTACAGAGGTTGAGATGTTGAAGGAAAGATTTTCTAAACTGCTACTCGGAGAAGATATGTCAGGCTGCGGAAATGGGGTTTGTACGGCGTTGGCTATATCGAATGCCATTACAAATCTTTGTGGTATGCTTTGACTCATTGATATTCTATCTAAGATTGACATTGGTAGACACTGATTCCCTTTGCCATTGTTTTGTTATAGCCACTCTGTTTGGGCAACTGTGGCGATTAGAGCCTATTTCAGAAGAGAAGAAAGTGCGGTGGCGAAGGGAGATGGATTGGCTTCTTTGTGTTAGCGATCATATTGTCGAGTTCACGCCTACTTGGCAGACGTTTCTTGATGGAAGCAAGCATGAGGTACTGAATAACTTCAAACAGGCTTGTTATGGCTGTATGGGTTTTGTTCGAATTGCCTGTTGCCTTCCATATTGTTTGTTCATATATAAACGCTAAGTAAATTTGTACAAACACAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGTAAGAACAGGCCTGCATCGAGAACGTGAAAACGGGAGAGTTTATATGTTTATGTATTTGTAAAGCATCAATTTTTTGATGGGGGTTTTTTTTTTTATGATCCTTCAGGTTATGACATGCAAACAACGGTCGGATCTTTATGTGAATCTTCCTGCTCTTCGGAAACTGGACAACATGCTTCTTGTATGATTCACCAATGTCTACTCGTCTCTGTGTTACAAACGTTTGAGATTTGTTCTAAATTTGGTAAAATAAACTTTGTGCAGGAAATATTAGATAGTTTTGAAGTTTGTGAGTTCTGGTATGTTGATCAAGGGATACACGGCCCTGAGACTGATGGGTCTTCCTCTTTCCATAGAGTGCTACAGCGTCAAGAAGATAAATGGTGGCTTCCCGTGCCTCGAGTTCCTCCGGGTGGTCTCCAGGAAGACTCAAGAAAGCAACTGCAACAAAAGCGCGACAGCACAAACCAGATATTAAAAGCTGCAATTGCAATTAACAGTGCTACTTTGGCTGATCTCGAAATTCCCGAACCGTATCTCGAAGCCTTACCGAAGGTACGAGATGCTTGAATTGTTACAATTCTGATATCTAAAGCAGTGTGTGATTTTCTAATCTTTTATTCCATTTGGTTTCTCAGAATGGAAGAGCCTGTTTGGGAGATCTCATATATCGATATATTTCATCAGATCAATTCTCTCCTCAATGTTTACTTGACTGCCTTGAAATGTCATCTGAACATCAAGCTACGGAGATCGCTAACCGGGTCGAGGCTTCTATCTACGTATGGCGAAAAAGAACGAGCTCAAAACCTGCTATGAACTCCATCAAACACAGTTCAAAATCGTCATGGGAAATGGTGAAGGAGCTGATGGTCGACTCGGAGAAAATGGAGCTGCTAGCAGAGAGAGCAGAAACTCTATTGCTTTGCCTGAAGCAACGGTTTCCTGGTCTTCCACAGACAACCTTAGATATGAACAAGATCCAGTACAATAAGGTTTGTCCCTACTGGAACCTTTTAACATTTCCAATGAGCTTAACACATAGTAACTTTAGTAGGTAATGTCTGTTTTGATCGTTTAGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGAGAGTAAAATCCAAGCTTGGTTTTCATGGCTGTATGTTTTCCAGTTGAATTTGTCAGTTTTGTGGATTTCTTTTTGTATGTATAGAATGTAATGTATATTTGGTCTTCAATTTGGTTGTATTTGTGTTGATGAGGAATCAAATGCTCCGCCTTCAAAGTAATACATACGTGCTTATTAATCACTGCACCATTAAAAGTCTTTTGGCAATCCTTTCTTAATTTGTTCTGATTGA

mRNA sequence

TCCCTTGGCACGTAGTTCATTATCATTTTGAAACGCCAAAAGTTAATTTAATCGCTGCATTGCATCTGCCATTCAAGAACCCTCGTTTGAGGAACGCAAAGCTTCAATCCTCGGGACCATGGGTGCTTTGTTGAGCTCTAATCAATGTCAATGGCGGACGGAGGCTTTCCCTGTCTCCTACTTCATGTGTTTATCCACAAAGTAATCATGATTTAAATTCACCGCCCTCTTTCTTTCATTCTTTCTTTATTTGTTGTTTGTTTTAACCGTTTGTACATACCCTTTTCATTATTGGGCATGGTTGATTTGTGATGAAACCTTTTGGATGGAGCTTTAAATCGACCCTTCAATTCTAAGAGTGGCCCTAAATCATTACCAACTCCATTTTCTTTGATTTGGCTTTCTGGGTGTTGGAATCTCCATCGGAATTTGTGTTTTGAGCTTAATTTGCAGAAGGGTTTGGATTAATAAGGCTTCTAGTGGGTGGATTCGAAGTGGGTTGCTTTGATTTTGTGCTATGGTTGTGATTGAAGAACGGAAATTGTAATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGAGAGTAAAATCCAAGCTTGGTTTTCATGGCTGTATGTTTTCCAGTTGAATTTGTCAGTTTTGTGGATTTCTTTTTGTATGTATAGAATGTAATGTATATTTGGTCTTCAATTTGGTTGTATTTGTGTTGATGAGGAATCAAATGCTCCGCCTTCAAAGTAATACATACGTGCTTATTAATCACTGCACCATTAAAAGTCTTTTGGCAATCCTTTCTTAATTTGTTCTGATTGA

Coding sequence (CDS)

ATGGATGAGAGTGTGGTTGAAAAGAGCCAAGGGATTGGCCACATTGTGCCTGAAAATGAGATGTTTAGCCATTTGATTGAAGAACATGGACGTGAGAGTAGCTCGAGTTCTGATTTTCTTACATCGGAGACCACAGGGGGGCTTGAGGAGCACAGTCACAGTGGCTCGGAGGACTCATCGCCCCCTTATTTATTGAGTTGGTCCACTCGAAAAGCTTACAGACCGGATTGTATTAGACCTAATGTTGCTGATAAAGAAGAAAAAAACTTTGTTGATAATAGGAAGGTGGAGAAGAACGTATCTTCTTCATCAGACCAAAAGCGTCAACGATCAATTCTCTCTTTTGGGTTATATGTTAGAGTTGGATTTTTTGTTCAATACAATCAGAAGATTTCTGATTTTGTGGATGTCGGAAAATCCATCCTAGAGAGCTACTCTCGAGTTTTGGAGAGCCTAGCATTCAACGTTGTTGCACGAATCGATGATTTGCTTTATGTGGACGATCTCACAAAGCATTCCGATGAGCAGCTCTCGTCCATATCGAAACTTGGTGTGATGTCTCACAAGAACAGCCCATTGCCTTTCTCAGTGCCCATCTCTGGCACTCCATATAAAACACCATTTGCCACTCCAAGCTTTTCACCTGCTCAAGCAGCGAGTCCTGCCAAAACTACCCAACGCGGATTCGGTATCAGAAAGGTTTTAATTGACTACCTTGGTATCGAAGCAAGAGGAGGAAAAGAAGCCAGCAATGATATAGAGAAACCTGAACCAGTTGCCTACGCAGAACTCGACAAGCAAACCGCTCAGCTCAGGGAAGGAGTAACGAGCTTCCCTTCACCCGAACAAGGATCGTTTGCATGA

Protein sequence

MDESVVEKSQGIGHIVPENEMFSHLIEEHGRESSSSSDFLTSETTGGLEEHSHSGSEDSSPPYLLSWSTRKAYRPDCIRPNVADKEEKNFVDNRKVEKNVSSSSDQKRQRSILSFGLYVRVGFFVQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLGVMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPAKTTQRGFGIRKVLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFPSPEQGSFA
BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF5_ARATH (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana GN=ROPGEF5 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-21
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 1

Query: 136 DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQ--LSSISKLGVMSHKN-SP 195
           D+GKSILESYSR LESLA N++ARIDDLLYVDDLTK SD+   LSS +   +++HK   P
Sbjct: 436 DIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSIIAHKKVVP 495

Query: 196 LPFSVPISGTPYKTPFA-TPSFSPA-------------QAASPAKTTQRGF-----GIRK 245
           LP+ +  SGTPY+T F+ TP FSP+              +    K  ++G      G+R+
Sbjct: 496 LPYLISASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSSKDTNKIIEKGLPSRGYGVRR 555

BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF7_ARATH (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana GN=ROPGEF7 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      D+GKSILESYSRVLESLAFN+VARIDDLL+VDDLT+HS +Q+   + LG
Sbjct: 394 IQYNK------DIGKSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIP--TTLG 453

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQ 218
             +  ++P   +VP+S       + TPS+SP++
Sbjct: 454 -NNGNDAPKSIAVPVSN------YTTPSYSPSK 471

BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF1_ARATH (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 3.1e-12
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVG+SILESYSRV+ES+AFN+ ARIDD+LYVDD  + S     S+S   
Sbjct: 416 IQYNK------DVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESLSLFS 475

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPA 217
           + +  N    FSV    +P+ +PFATP+ S A
Sbjct: 476 I-NGLNPQKAFSV--QSSPHGSPFATPALSVA 498

BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROFG6_ARATH (Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana GN=ROPGEF6 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10
Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHS--------DEQ 184
           +QYN+      DVGKSILESYSRVLESLA+++  RI+++L++DD++K           ++
Sbjct: 433 IQYNK------DVGKSILESYSRVLESLAYSIGVRIEEVLFMDDISKDDGDGDDDSCSDK 492

Query: 185 LSSISK------LGVMSHK-NSPLPFSVPISG--TPYKT---PFATPSFSPAQAASPAK- 240
           L  +SK       G +  K ++P  FSV  SG  TPY+T     +TPS+SP    SP   
Sbjct: 493 LRLLSKEAASGGSGSLREKLSAPSLFSVSFSGTSTPYRTLSFSASTPSYSPMPLISPING 552

BLAST of Cp4.1LG19g03190 vs. Swiss-Prot
Match: ROGF3_ARATH (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSD 175
           +QYN+      DVGK++LESYSRVLE LAFN+VA IDD+LYVD   + S+
Sbjct: 430 IQYNK------DVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473

BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A0A0KXQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303120 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54
Identity = 119/166 (71.69%), Postives = 131/166 (78.92%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSD QLSSISKLG
Sbjct: 431 IQYNK------DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDHQLSSISKLG 490

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPA-----------KTTQRGFGIRK 244
           V+SHKNSPL F VPISGTPYKTPFATPSFSPAQ ASPA           K  QRGFG++K
Sbjct: 491 VISHKNSPLHFPVPISGTPYKTPFATPSFSPAQTASPAKGERSPFIPGTKIPQRGFGVKK 550

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFP 280
           VL DYL +EARGGKE SN IEK EP+  ++L++Q +Q R GV S P
Sbjct: 551 VLTDYLSVEARGGKELSNKIEKAEPITNSKLERQASQYRGGVASSP 590

BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: M5VXJ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002319mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38
Identity = 92/147 (62.59%), Postives = 110/147 (74.83%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLT+HSD Q SSISK+ 
Sbjct: 515 IQYNK------DVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTRHSD-QFSSISKVS 574

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASP-----------AKTTQRGFGIRK 244
           ++SHK++P P+SVPIS TPYKT F TPSFSP Q  SP            K  QRG G++K
Sbjct: 575 IISHKSTPNPYSVPISSTPYKTAFTTPSFSPGQLVSPLRGDRSPFITSGKIPQRGLGVKK 634

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVA 261
           VL DYL I+A+ GK+ S+ IEKP+ V+
Sbjct: 635 VLTDYLSIDAK-GKDYSDPIEKPDSVS 653

BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A061ESK3_THECC (RHO guanyl-nucleotide exchange factor 7 OS=Theobroma cacao GN=TCM_021824 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 87/144 (60.42%), Postives = 103/144 (71.53%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLTKHSD Q SS++++G
Sbjct: 525 IQYNK------DVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD-QFSSLTRVG 584

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPA-----------KTTQRGFGIRK 244
           V+  K+  +P+SVP S TPY+T F TP+FSPAQ  SPA           K  QRG G++K
Sbjct: 585 VIGQKSLSIPYSVPFSSTPYRTAFTTPNFSPAQLVSPAKGERSPYLTSSKFQQRGIGVKK 644

Query: 245 VLIDYLGIEARGGKEASNDIEKPE 258
           VL DYL I+ R GKE SN  E  E
Sbjct: 645 VLTDYLSIDVR-GKECSNSNEGTE 660

BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: B9HC61_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s09370g PE=4 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 5.0e-33
Identity = 92/168 (54.76%), Postives = 112/168 (66.67%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLTKHSD   SSISK+ 
Sbjct: 440 IQYNK------DVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTKHSD-HFSSISKVS 499

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPA-QAASPA-----------KTTQRGFGIR 244
           V++HK+  +P+SVP+S TPYKT F TPSFSP  Q  SPA           K  QRG G++
Sbjct: 500 VIAHKSVTIPYSVPVSNTPYKTAFNTPSFSPGQQRISPAKGDRSPFMTSGKIPQRGLGVK 559

Query: 245 KVLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFPS 281
           KVL +YL I+   G++  N IE  + V      + T+  + GV SF S
Sbjct: 560 KVLTEYLSIDTE-GRDGGNMIEGADNVI-----RNTSASQTGVESFGS 594

BLAST of Cp4.1LG19g03190 vs. TrEMBL
Match: A0A151QTL3_CAJCA (Rop guanine nucleotide exchange factor 1 OS=Cajanus cajan GN=KK1_045520 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 87/170 (51.18%), Postives = 113/170 (66.47%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGK+ILESYSRVLESLAFN+VARIDD+LYVDDLTKHSD Q+SS+SK+G
Sbjct: 564 IQYNK------DVGKAILESYSRVLESLAFNMVARIDDVLYVDDLTKHSD-QISSLSKVG 623

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPAK-----------TTQRGFGIRK 244
           V++HK+  +P SVP+  TPYK+ F TPS SPA   SP+K             QRG G++K
Sbjct: 624 VVTHKSISVPHSVPVPSTPYKSAFGTPSLSPAHGVSPSKGGKSPLINDSNLPQRGSGVKK 683

Query: 245 VLIDYLGIEARGGKEASNDIEKPE------PVAYAELDKQTAQLREGVTS 278
            L D+L I+A+ GK++ + IEK         V   E D +++   EG  S
Sbjct: 684 SLTDFLSIDAK-GKDSDSSIEKQVAESKTLEVPTVETDVESSDCTEGAAS 725

BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT5G05940.1 (AT5G05940.1 ROP guanine nucleotide exchange factor 5)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 1

Query: 136 DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQ--LSSISKLGVMSHKN-SP 195
           D+GKSILESYSR LESLA N++ARIDDLLYVDDLTK SD+   LSS +   +++HK   P
Sbjct: 436 DIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSIIAHKKVVP 495

Query: 196 LPFSVPISGTPYKTPFA-TPSFSPA-------------QAASPAKTTQRGF-----GIRK 245
           LP+ +  SGTPY+T F+ TP FSP+              +    K  ++G      G+R+
Sbjct: 496 LPYLISASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSSKDTNKIIEKGLPSRGYGVRR 555

BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT5G02010.1 (AT5G02010.1 RHO guanyl-nucleotide exchange factor 7)

HSP 1 Score: 84.7 bits (208), Expect = 9.9e-17
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      D+GKSILESYSRVLESLAFN+VARIDDLL+VDDLT+HS +Q+   + LG
Sbjct: 394 IQYNK------DIGKSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIP--TTLG 453

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQ 218
             +  ++P   +VP+S       + TPS+SP++
Sbjct: 454 -NNGNDAPKSIAVPVSN------YTTPSYSPSK 471

BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT4G38430.1 (AT4G38430.1 rho guanyl-nucleotide exchange factor 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVG+SILESYSRV+ES+AFN+ ARIDD+LYVDD  + S     S+S   
Sbjct: 416 IQYNK------DVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESLSLFS 475

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPA 217
           + +  N    FSV    +P+ +PFATP+ S A
Sbjct: 476 I-NGLNPQKAFSV--QSSPHGSPFATPALSVA 498

BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT3G55660.1 (AT3G55660.1 ROP (rho of plants) guanine nucleotide exchange factor 6)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-12
Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHS--------DEQ 184
           +QYN+      DVGKSILESYSRVLESLA+++  RI+++L++DD++K           ++
Sbjct: 433 IQYNK------DVGKSILESYSRVLESLAYSIGVRIEEVLFMDDISKDDGDGDDDSCSDK 492

Query: 185 LSSISK------LGVMSHK-NSPLPFSVPISG--TPYKT---PFATPSFSPAQAASPAK- 240
           L  +SK       G +  K ++P  FSV  SG  TPY+T     +TPS+SP    SP   
Sbjct: 493 LRLLSKEAASGGSGSLREKLSAPSLFSVSFSGTSTPYRTLSFSASTPSYSPMPLISPING 552

BLAST of Cp4.1LG19g03190 vs. TAIR10
Match: AT4G00460.2 (AT4G00460.2 RHO guanyl-nucleotide exchange factor 3)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-09
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSD 175
           +QYN+      DVGK++LESYSRVLE LAFN+VA IDD+LYVD   + S+
Sbjct: 430 IQYNK------DVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473

BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|659069194|ref|XP_008448594.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 5.1e-55
Identity = 123/172 (71.51%), Postives = 136/172 (79.07%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSD QLSSISKLG
Sbjct: 431 IQYNK------DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDHQLSSISKLG 490

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPA-----------KTTQRGFGIRK 244
           V+SHKNSPL F VPISGTPYKTPFATPSFSPAQ ASPA           K  QRGFG++K
Sbjct: 491 VISHKNSPLHFPVPISGTPYKTPFATPSFSPAQTASPAKGERSPFIPGTKIPQRGFGVKK 550

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFPSPEQGS 286
           VL DYL +EARGGKE SN IEK EP+  ++L++QT+Q R GV S  SP+Q S
Sbjct: 551 VLTDYLSVEARGGKELSNKIEKAEPITNSKLERQTSQYRGGVAS--SPKQRS 594

BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|449460361|ref|XP_004147914.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 119/166 (71.69%), Postives = 131/166 (78.92%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSD QLSSISKLG
Sbjct: 431 IQYNK------DVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDHQLSSISKLG 490

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASPA-----------KTTQRGFGIRK 244
           V+SHKNSPL F VPISGTPYKTPFATPSFSPAQ ASPA           K  QRGFG++K
Sbjct: 491 VISHKNSPLHFPVPISGTPYKTPFATPSFSPAQTASPAKGERSPFIPGTKIPQRGFGVKK 550

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVAYAELDKQTAQLREGVTSFP 280
           VL DYL +EARGGKE SN IEK EP+  ++L++Q +Q R GV S P
Sbjct: 551 VLTDYLSVEARGGKELSNKIEKAEPITNSKLERQASQYRGGVASSP 590

BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|595822881|ref|XP_007204968.1| (hypothetical protein PRUPE_ppa002319mg [Prunus persica])

HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38
Identity = 92/147 (62.59%), Postives = 110/147 (74.83%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLT+HSD Q SSISK+ 
Sbjct: 515 IQYNK------DVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTRHSD-QFSSISKVS 574

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASP-----------AKTTQRGFGIRK 244
           ++SHK++P P+SVPIS TPYKT F TPSFSP Q  SP            K  QRG G++K
Sbjct: 575 IISHKSTPNPYSVPISSTPYKTAFTTPSFSPGQLVSPLRGDRSPFITSGKIPQRGLGVKK 634

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVA 261
           VL DYL I+A+ GK+ S+ IEKP+ V+
Sbjct: 635 VLTDYLSIDAK-GKDYSDPIEKPDSVS 653

BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|694408379|ref|XP_009378875.1| (PREDICTED: rop guanine nucleotide exchange factor 7-like [Pyrus x bretschneideri])

HSP 1 Score: 164.1 bits (414), Expect = 3.7e-37
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 1

Query: 130 KISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLGVMSHK 189
           KI    DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLT+HSD Q  SISK+ ++ H 
Sbjct: 532 KIQHNKDVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTRHSD-QFPSISKVSMIPHN 591

Query: 190 NSPLPFSVPISGTPYKTPFATPSFSPAQAASP-----------AKTTQRGFGIRKVLIDY 249
           ++P P+SVPIS TPYKTPFATPSFSP+Q  SP            K  QRG G++KVL DY
Sbjct: 592 STPTPYSVPISSTPYKTPFATPSFSPSQLVSPLRGDGSPFITSGKIPQRGLGVKKVLTDY 651

Query: 250 LGIEARGGKEASNDIEKPEPV 260
           L I+A+ GK+ S+ IEKP+ V
Sbjct: 652 LSIDAK-GKDYSDPIEKPDSV 670

BLAST of Cp4.1LG19g03190 vs. NCBI nr
Match: gi|645220407|ref|XP_008240123.1| (PREDICTED: rop guanine nucleotide exchange factor 7 [Prunus mume])

HSP 1 Score: 163.7 bits (413), Expect = 4.8e-37
Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 1

Query: 125 VQYNQKISDFVDVGKSILESYSRVLESLAFNVVARIDDLLYVDDLTKHSDEQLSSISKLG 184
           +QYN+      DVGKSILESYSRVLESLAFN+VARIDDLLYVDDLT+HSD Q SSISK+ 
Sbjct: 533 IQYNK------DVGKSILESYSRVLESLAFNIVARIDDLLYVDDLTRHSD-QFSSISKVS 592

Query: 185 VMSHKNSPLPFSVPISGTPYKTPFATPSFSPAQAASP-----------AKTTQRGFGIRK 244
           ++SHK++P P++VPIS TPYKT F TPSFSP Q  SP            K  QRG G++K
Sbjct: 593 IISHKSTPNPYTVPISSTPYKTAFTTPSFSPGQLVSPLRGDRSPFITSGKIPQRGLGVKK 652

Query: 245 VLIDYLGIEARGGKEASNDIEKPEPVA 261
           VL DYL I+A+ GK+  + IEKP+ V+
Sbjct: 653 VLTDYLSIDAK-GKDYGDPIEKPDSVS 671

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ROGF5_ARATH2.8e-2148.09Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana GN=ROPGEF5 PE=2... [more]
ROGF7_ARATH1.8e-1552.69Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana GN=ROPGEF7 PE=1... [more]
ROGF1_ARATH3.1e-1248.91Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1... [more]
ROFG6_ARATH1.0e-1037.09Rop guanine nucleotide exchange factor 6 OS=Arabidopsis thaliana GN=ROPGEF6 PE=2... [more]
ROGF3_ARATH1.4e-0760.00Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana GN=ROPGEF3 PE=2... [more]
Match NameE-valueIdentityDescription
A0A0A0KXQ7_CUCSA1.0e-5471.69Uncharacterized protein OS=Cucumis sativus GN=Csa_4G303120 PE=4 SV=1[more]
M5VXJ9_PRUPE5.1e-3862.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002319mg PE=4 SV=1[more]
A0A061ESK3_THECC2.6e-3460.42RHO guanyl-nucleotide exchange factor 7 OS=Theobroma cacao GN=TCM_021824 PE=4 SV... [more]
B9HC61_POPTR5.0e-3354.76Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s09370g PE=4 SV=2[more]
A0A151QTL3_CAJCA1.4e-3251.18Rop guanine nucleotide exchange factor 1 OS=Cajanus cajan GN=KK1_045520 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G05940.11.6e-2248.09 ROP guanine nucleotide exchange factor 5[more]
AT5G02010.19.9e-1752.69 RHO guanyl-nucleotide exchange factor 7[more]
AT4G38430.11.8e-1348.91 rho guanyl-nucleotide exchange factor 1[more]
AT3G55660.15.6e-1237.09 ROP (rho of plants) guanine nucleotide exchange factor 6[more]
AT4G00460.27.6e-0960.00 RHO guanyl-nucleotide exchange factor 3[more]
Match NameE-valueIdentityDescription
gi|659069194|ref|XP_008448594.1|5.1e-5571.51PREDICTED: rop guanine nucleotide exchange factor 7-like [Cucumis melo][more]
gi|449460361|ref|XP_004147914.1|1.5e-5471.69PREDICTED: rop guanine nucleotide exchange factor 7 [Cucumis sativus][more]
gi|595822881|ref|XP_007204968.1|7.4e-3862.59hypothetical protein PRUPE_ppa002319mg [Prunus persica][more]
gi|694408379|ref|XP_009378875.1|3.7e-3763.83PREDICTED: rop guanine nucleotide exchange factor 7-like [Pyrus x bretschneideri... [more]
gi|645220407|ref|XP_008240123.1|4.8e-3761.22PREDICTED: rop guanine nucleotide exchange factor 7 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005089Rho guanyl-nucleotide exchange factor activity
Vocabulary: INTERPRO
TermDefinition
IPR005512PRONE_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0065009 regulation of molecular function
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005089 Rho guanyl-nucleotide exchange factor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g03190.1Cp4.1LG19g03190.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005512PRONE domainPFAMPF03759PRONEcoord: 129..171
score: 7.0
IPR005512PRONE domainPROFILEPS51334PRONEcoord: 1..177
score: 14
NoneNo IPR availablePANTHERPTHR33101FAMILY NOT NAMEDcoord: 136..284
score: 3.6
NoneNo IPR availablePANTHERPTHR33101:SF1ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 7coord: 136..284
score: 3.6

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG19g03190Cp4.1LG10g08180Cucurbita pepo (Zucchini)cpecpeB078
Cp4.1LG19g03190Cp4.1LG01g25460Cucurbita pepo (Zucchini)cpecpeB382
Cp4.1LG19g03190Cp4.1LG08g11990Cucurbita pepo (Zucchini)cpecpeB429
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG19g03190Wild cucumber (PI 183967)cpecpiB499
Cp4.1LG19g03190Wild cucumber (PI 183967)cpecpiB481
Cp4.1LG19g03190Cucumber (Chinese Long) v2cpecuB480
Cp4.1LG19g03190Cucumber (Chinese Long) v2cpecuB496
Cp4.1LG19g03190Bottle gourd (USVL1VR-Ls)cpelsiB404
Cp4.1LG19g03190Watermelon (Charleston Gray)cpewcgB422
Cp4.1LG19g03190Watermelon (Charleston Gray)cpewcgB432
Cp4.1LG19g03190Watermelon (97103) v1cpewmB474
Cp4.1LG19g03190Watermelon (97103) v1cpewmB485
Cp4.1LG19g03190Melon (DHL92) v3.5.1cpemeB442
Cp4.1LG19g03190Melon (DHL92) v3.5.1cpemeB462
Cp4.1LG19g03190Cucumber (Gy14) v2cgybcpeB373
Cp4.1LG19g03190Cucumber (Gy14) v2cgybcpeB532
Cp4.1LG19g03190Melon (DHL92) v3.6.1cpemedB525
Cp4.1LG19g03190Melon (DHL92) v3.6.1cpemedB541
Cp4.1LG19g03190Silver-seed gourdcarcpeB0227
Cp4.1LG19g03190Silver-seed gourdcarcpeB0790
Cp4.1LG19g03190Silver-seed gourdcarcpeB0830
Cp4.1LG19g03190Silver-seed gourdcarcpeB1390
Cp4.1LG19g03190Cucumber (Chinese Long) v3cpecucB0594
Cp4.1LG19g03190Cucumber (Chinese Long) v3cpecucB0611
Cp4.1LG19g03190Wax gourdcpewgoB0608
Cp4.1LG19g03190Cucurbita pepo (Zucchini)cpecpeB084
Cp4.1LG19g03190Cucurbita pepo (Zucchini)cpecpeB416
Cp4.1LG19g03190Cucumber (Gy14) v1cgycpeB0099
Cp4.1LG19g03190Cucumber (Gy14) v1cgycpeB0486
Cp4.1LG19g03190Cucurbita maxima (Rimu)cmacpeB278
Cp4.1LG19g03190Cucurbita maxima (Rimu)cmacpeB668
Cp4.1LG19g03190Cucurbita maxima (Rimu)cmacpeB829
Cp4.1LG19g03190Cucurbita maxima (Rimu)cmacpeB880
Cp4.1LG19g03190Cucurbita moschata (Rifu)cmocpeB240
Cp4.1LG19g03190Cucurbita moschata (Rifu)cmocpeB619
Cp4.1LG19g03190Cucurbita moschata (Rifu)cmocpeB782
Cp4.1LG19g03190Cucurbita moschata (Rifu)cmocpeB817