Cp4.1LG19g01480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAGAAAGCAAAAACCTCTGGTGGCGCGTGGCCGGCGAGTGGAGGAGACACGGCGGACGGCGGCTCTGAAATGGGTTCGAGAGAGCGAAAGAAAGCAGCAACATCTTCCTCAATGAATCATGAGAAGCCCACAGAATTTGATGCATCCACAAGCTCTAGTGCTGTACTTTTCTCATAACTCAGCTTTTACCTTTGAATTTCATGCTTTTTTACTCGAGATTTTCAACTATTTTTCCGGAGCGCCACGCTCGGTTGTACCTATCGGCGAATTGACTCTGTCGAACGTGCAGGTGGTGAATGTCGAGAGTTTAGCGAGAGGATTCCTCATAAGCGTATATTTGGAAAAGAATTCGCCCGGATTGTTAATTCGGATTCTAGAAGCCTTCGAAAAATTGGGACTCGAAGTCCTCGATGCTAACGTGTCTTGTTCCGATTGTTTCCAACTCCAAGCAGTCGGGGAAGAGGTTCGAGTTCCATATCATAAGCTCACTAACACGAACATAACCCAACAATTAAAACTTCAAATTCGCTTTTTTTTGTTGTGCAGAATGAAGACACAAAAATCGTAAAGCCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGCGCAGACATGA AGAAAGAAAGCAAAAACCTCTGGTGGCGCGTGGCCGGCGAGTGGAGGAGACACGGCGGACGGCGGCTCTGAAATGGGTTCGAGAGAGCGAAAGAAAGCAGCAACATCTTCCTCAATGAATCATGAGAAGCCCACAGAATTTGATGCATCCACAAGCTCTAGTGCTGTGGTGAATGTCGAGAGTTTAGCGAGAGGATTCCTCATAAGCGTATATTTGGAAAAGAATTCGCCCGGATTGTTAATTCGGATTCTAGAAGCCTTCGAAAAATTGGGACTCGAAGTCCTCGATGCTAACGTGTCTTGTTCCGATTGTTTCCAACTCCAAGCAGTCGGGGAAGAGAATGAAGACACAAAAATCGTAAAGCCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGCGCAGACATGA AGAAAGAAAGCAAAAACCTCTGGTGGCGCGTGGCCGGCGAGTGGAGGAGACACGGCGGACGGCGGCTCTGAAATGGGTTCGAGAGAGCGAAAGAAAGCAGCAACATCTTCCTCAATGAATCATGAGAAGCCCACAGAATTTGATGCATCCACAAGCTCTAGTGCTGTGGTGAATGTCGAGAGTTTAGCGAGAGGATTCCTCATAAGCGTATATTTGGAAAAGAATTCGCCCGGATTGTTAATTCGGATTCTAGAAGCCTTCGAAAAATTGGGACTCGAAGTCCTCGATGCTAACGTGTCTTGTTCCGATTGTTTCCAACTCCAAGCAGTCGGGGAAGAGAATGAAGACACAAAAATCGTAAAGCCCCAAGTGGTGAAAAAAGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGCGCAGACATGA RKKAKTSGGAWPASGGDTADGGSEMGSRERKKAATSSSMNHEKPTEFDASTSSSAVVNVESLARGFLISVYLEKNSPGLLIRILEAFEKLGLEVLDANVSCSDCFQLQAVGEENEDTKIVKPQVVKKAVKQAIKEWSESNAQT
BLAST of Cp4.1LG19g01480 vs. TrEMBL
Match: A0A0A0L039_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G329560 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38 Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TrEMBL
Match: D7SR22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00960 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-20 Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TrEMBL
Match: A0A0D2S8L1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G006200 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-19 Identity = 57/108 (52.78%), Postives = 80/108 (74.07%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TrEMBL
Match: M5WE19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017010mg PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-19 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TrEMBL
Match: A0A0B0MKH5_GOSAR (Transcription factor bHLH61-like protein OS=Gossypium arboreum GN=F383_25075 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.7e-19 Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TAIR10
Match: AT2G40435.1 (AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)) HSP 1 Score: 87.4 bits (215), Expect = 7.6e-18 Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. TAIR10
Match: AT3G56220.1 (AT3G56220.1 transcription regulators) HSP 1 Score: 85.1 bits (209), Expect = 3.8e-17 Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. NCBI nr
Match: gi|659128550|ref|XP_008464258.1| (PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 3.0e-40 Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. NCBI nr
Match: gi|449464418|ref|XP_004149926.1| (PREDICTED: uncharacterized protein LOC101209807 [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 1.6e-38 Identity = 90/120 (75.00%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. NCBI nr
Match: gi|359481316|ref|XP_002268100.2| (PREDICTED: uncharacterized protein LOC100241403 isoform X2 [Vitis vinifera]) HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20 Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. NCBI nr
Match: gi|645221499|ref|XP_008245174.1| (PREDICTED: transcription factor bHLH61-like isoform X1 [Prunus mume]) HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
BLAST of Cp4.1LG19g01480 vs. NCBI nr
Match: gi|823162412|ref|XP_012481156.1| (PREDICTED: transcription factor SCREAM2-like [Gossypium raimondii]) HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19 Identity = 57/108 (52.78%), Postives = 80/108 (74.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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