Cp4.1LG18g06360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g06360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSerine/arginine repetitive matrix protein 2, putative isoform 1
LocationCp4.1LG18 : 6567010 .. 6570000 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATCAGTATTTTTTAAAAAATTATTTTTGGGGGAGTAATAACTCAACTGGAATAAATCCCAAGAGGTCAAGTTCTTCGCAAGAGGTCAAGTTCTAATCTGAAATATTTGTCGAACTAAAGGAAAAATTCAGAATACTCATCTTGGAATCTGAAGTTCTTCGCACATCCGTAGCGGAAAGGTAAAAGAAGAGAGAATTCTTTGATTTGTAGCGTTGGAATTTCATCTGGGTTCTTCGGATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCTAAGATGCAATCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTTGACCTGTTCGATAAATTTGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGTATATATAAAATCTACGCATTTTTTTTTTTCCCTATCGCGTTATGTTATTCGATTGATGTTTGTTTTGCGGTTGATTAATGCGGCGAATGATGATTGAAAGTGGTGATTTATCAGGGTTATTAGTTCTATCGCTTGTATTGATTTGGTGAACCGACTGATGATCATGTGGTGCTTGGAATTTGTGTTATCTGCTATTACTTCAGCGTGATAGAATTGCTGGATGTTCTTATAAATTGAAGTGGTAGATCAGCCTTCTTTCTATACAAAATGCTACTGATTTGTTGGTGCATTTGAATTGGGGTGATGCTTGTGATACCTTTATTTGATGACTTTGGCTGATCTAATTCGAATTGTATCAATTAGGGAACAGCGGTGTCACGTTCATTTCTTTGAGGTATTATGATGCAATAGCTAGATGCCCTTAAAAGCTTTGATTGTTTAGGTTGCAGGGTTGTTCTTGTGTCTTATAGTTACCGAAATTGCGCCGTAGAAGCCTACTGCGGGGTTTCATTTATCTGTGACCAAGTTTTATGTGTGAATAAAGTTCTCACGGAGTACTGCCCAAACAAGTGGCTAATGTAATTACAGAACAAAGTAGTTTGTACCACTATGACACCATACACATTGGGTTACTGCAATTTCACACAATTTTTTTTTGATGTGAACAGTTAGAGGATCGCCAATGTTAAAATGCCTTGACAATGTCTTGAGATTTTAGCTGAATCTTAATTCAGATCATACTTCGTTGCTGCAGTCTTGATGTAAAATATGCAAGGCCCGAGAGAATATTGTATGAAAATCTATGATTGATGTCAACTGATTACCAGTCACGTGATTTTGTAGTTTCGAGTTGTTATAACTCGAGAGTCTAGATGACAAAGGGTAGTGCTTTTGTTGACATTTAGATTGCAAATTTTCGATTCAGCGGGCATTACTTAATTACACAAACTATTCAAATTGTACCTATAGAAGGTAATAAGTATTAATAGAACAAGCCTTCACTTTGTTGCCTTTTTCTTCATCCCCCTGTTTCTTGAGGAATGTGAAATGTTCCGAATCATTATAGAGACTGTCATTTGCTCGAACCTCCGACTTATAGATCTGTTTCCTTTCATTGTCTCTTCATTTTTGTCTAATTCCAGTTTCACTATTTCTTGTTATCAGACCTAATTCGTGTGGCTGGTTGAGATATGGGAAAATGGTCTGATAATTGTGTGTATTGGCATAGCCATTTGATTTAGTGTAGTTATGACCATTTCATAGTTTATCTGGCCTGAGAATGCAAAACTTTTGTAGTGAGACAAGCTTTCGATACGGTGTAGGATAGTGTTTCTTTCGTCTAGGTATGGTGCCTTGTCAAAGCAGAAGTATTATTTCAACCATTTCGCCTTAAAAACTGAGCTTATTTGCAGACCATAAAGGCCTTTTTTGAACTTTTTGTGCCATTTATATTCATGGAATGATGATATTTTTCCTTGGAATAGGGTCTATCTCTGGAGCAACTCGGTTGGCTCCATTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTTAGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGAGAAATAGGAACCTCATACCTCATTCACTAATGCAGTTGGGTAGGTAAATTTGGCATTGTTAACCAAGTCCACCGTGTTGAAGTATCTGATATATTATGTGCAGATGGTCTAGCAAGCCAAGGCTCTGTTCTTAATTCATATAGTTCACCTATGCAGGATCATTAGATGGTTATCAGAGATTCGAGAGACCGAATAGAGTGGAAAGTGACGATGACGACGTGAGGTCGGAGAGAAATGGAATGGCTCTACAGATGGTTCCAGTTCGGAGTTCAGTTCCATTTGCTTCGTCCCGACCCGCCTTGTCTATTTAAAGCCCCCCCAAACTTATGGTTGTTTATGCTTAGTTGTTTTTGGACCGACCGAGTACTTTAGGATCTCCAAATTCACCAGCTTGTTATTTAAATGAGGTGAATTCTCAGGTTCTTGTCGTCCCCTCCACCCCTGTCCTATCAAATCTATACACACAGCCACAGTAAGAAATTTTGCTTATGCATGTATAAAAGTAACTGATAAATTGTTTTACATTTGAAATGCCTGTAAGATCATTCTCAGTTTGTTGTAGTAGCAGTAATTTCCATACTCCTTGAAACTTTTATGCTATTGGTATAAGAAGTTCTCTTTTATAGGTTTTTGTTGCTGTAACACTGAAGATCTGCCTCTTCTGTACTGTTCTATGGAAGGAAGGTTGTATGATCTGTTAGGGACCGTAGTCACAATGCC

mRNA sequence

TAAATCAGTATTTTTTAAAAAATTATTTTTGGGGGAGTAATAACTCAACTGGAATAAATCCCAAGAGGTCAAGTTCTTCGCAAGAGGTCAAGTTCTAATCTGAAATATTTGTCGAACTAAAGGAAAAATTCAGAATACTCATCTTGGAATCTGAAGTTCTTCGCACATCCGTAGCGGAAAGGTAAAAGAAGAGAGAATTCTTTGATTTGTAGCGTTGGAATTTCATCTGGGTTCTTCGGATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCTAAGATGCAATCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTTGACCTGTTCGATAAATTTGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGGTCTATCTCTGGAGCAACTCGGTTGGCTCCATTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTTAGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGAGAAATAGGAACCTCATACCTCATTCACTAATGCAGTTGGGATCATTAGATGGTTATCAGAGATTCGAGAGACCGAATAGAGTGGAAAGTGACGATGACGACGTGAGGTCGGAGAGAAATGGAATGGCTCTACAGATGGTTCCAGTTCGGAGTTCAGTTCCATTTGCTTCGTCCCGACCCGCCTTGTCTATTTAAAGCCCCCCCAAACTTATGGTTGTTTATGCTTAGTTGTTTTTGGACCGACCGAGTACTTTAGGATCTCCAAATTCACCAGCTTGTTATTTAAATGAGGTGAATTCTCAGGTTCTTGTCGTCCCCTCCACCCCTGTCCTATCAAATCTATACACACAGCCACAGTAAGAAATTTTGCTTATGCATGTATAAAAGTAACTGATAAATTGTTTTACATTTGAAATGCCTGTAAGATCATTCTCAGTTTGTTGTAGTAGCAGTAATTTCCATACTCCTTGAAACTTTTATGCTATTGGTATAAGAAGTTCTCTTTTATAGGTTTTTGTTGCTGTAACACTGAAGATCTGCCTCTTCTGTACTGTTCTATGGAAGGAAGGTTGTATGATCTGTTAGGGACCGTAGTCACAATGCC

Coding sequence (CDS)

ATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCTAAGATGCAATCTGCGCCTTTGAAGTTATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTTGACCTGTTCGATAAATTTGTTGAACCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCAAAGGGTCTATCTCTGGAGCAACTCGGTTGGCTCCATTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTTAGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGA

Protein sequence

MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSNQPED
Homology
[Close]
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match: A0A0A0LZW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G424870 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.9e-73
Identity = 144/181 (79.56%), Postives = 158/181 (87.29%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     L +LIPSSF LGHRNRSTRSGK KFIE+DLESSS+GAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDK VEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFAK SISG TRLAP+DTE +TSN  ELEI+VKT T  DNSN PE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match: M5WHP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012162mg PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLE------- 60
           MAR+L+Q+     S +          +P S    HR RSTRSGKA+ IEIDL+       
Sbjct: 1   MARLLTQTLQLRHSLLHRPR------VPPSLTQAHRARSTRSGKAQLIEIDLDPSTSSSS 60

Query: 61  -SSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDK 120
            SSS   DSE L ++KLDD V+ I+++R+TPDW+PFVPGSSFWVPP R  P KV DL  K
Sbjct: 61  SSSSPANDSEKLMLKKLDDIVQTILIQRATPDWLPFVPGSSFWVPP-RLAPLKVTDLVGK 120

Query: 121 FVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTI 180
             + L+ E S S+A  RGWPC  FF  G  SG+T    +D E + S EVE+E+EVK  T 
Sbjct: 121 LADQLTDEESLSVATDRGWPCSQFFVHG--SGSTETREVDMEAEGSAEVEVEVEVKVLTE 180

Query: 181 TDNSNQPED 182
           +   ++ ED
Sbjct: 181 SQKPSRCED 180

[Close]
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match: W9RJQ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000704 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-24
Identity = 73/178 (41.01%), Postives = 103/178 (57.87%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLE-SSSFGA 60
           MA++LSQ+ +   +++    L+             R RST SG  +  EI+L  SSS G 
Sbjct: 1   MAKLLSQTLTLRRTQLSLNQLR-------------RFRSTLSGNGRLTEIELSPSSSEGG 60

Query: 61  DSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLSK 120
           +SE L ++KLDD V R IV+R+TPDW+PF+PG SFWVPPRR    K  D   K  + LS 
Sbjct: 61  ESEALMLKKLDDIVHRFIVQRATPDWLPFLPGYSFWVPPRRGS-MKFADFVGKIADHLSD 120

Query: 121 EVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSN 178
           E S SL + RGWP   FF  G   G  +L  +D E + + E+E E+E +  T +++S+
Sbjct: 121 EESLSLCSDRGWPSSRFFVDG--HGFGQLGAVDAEAEEAAEMESEVEEEVLTDSEDSH 162

[Close]
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match: A0A124SI81_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009730 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22
Identity = 73/186 (39.25%), Postives = 107/186 (57.53%), Query Frame = 1 

Query: 1   MARILSQS--QSFISSKMQS-APLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSF 60
           MAR LS++  QS  SS + S    KL +  P  F       S+RSGKA+ IE++LES   
Sbjct: 1   MARFLSKTLIQSTSSSSLNSFETFKLGVSQPHRF-------SSRSGKAQLIEVELES--- 60

Query: 61  GADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRK--VVDLFDKFVE 120
             + EV+ IRKL+D +  IIV +STPDW+PF+PGSS+WVPPRR +P    +V++ +K   
Sbjct: 61  --EGEVVGIRKLEDVIHNIIVRQSTPDWLPFIPGSSYWVPPRRHRPESHGIVEVLEKLTN 120

Query: 121 PLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDN 180
           P++++ S SL  SRGWP   +F +G+       +P+             +E K     +N
Sbjct: 121 PMTEDESMSLNTSRGWPSSSYFLEGT-------SPVH-----------PVEAKAYNNEEN 156

Query: 181 SNQPED 182
            +QP+D
Sbjct: 181 MSQPKD 156

[Close]
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match: A0A0K9RQI8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040400 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.5e-22
Identity = 67/162 (41.36%), Postives = 96/162 (59.26%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFV---LGHRNRSTRSGKAKFIEIDLESSSF 60
           MAR  SQ  +   S    A   LL L+PSS     L H  R+  S KA+ IEIDLESS  
Sbjct: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHP-RNHLSTKARLIEIDLESSD- 60

Query: 61  GADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPL 120
           G + EV+ ++KL+D +  I V R  PDW+P  PGSS+WVPP+R+    ++++ ++   PL
Sbjct: 61  GGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSD-NIIEIVERLTNPL 120

Query: 121 SKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSN 160
           ++E   SL+++RGWP   FF +GSI  +T +       D+SN
Sbjct: 121 TEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSN 159

[Close]
BLAST of Cp4.1LG18g06360 vs. TAIR10
Match: AT1G78890.1 (AT1G78890.1 unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESS 60
           MAR LS S S    +  +A L    L+PSS  +  R+     RS  +      EID+ + 
Sbjct: 1   MARSLSPSLSLSRYRFAAASL----LLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAAD 60

Query: 61  SFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVE 120
                     + KL+D V RI+V RS PDW+PFVPG+SFWVPP R++   +  L +K   
Sbjct: 61  PL--------VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLAN 120

Query: 121 PLSKEVSPSLANSRGWPCLDFFAKG 141
           P+S E S S+++ RGWPC D+F KG
Sbjct: 121 PISDEESISISSVRGWPCSDYFIKG 133

[Close]
BLAST of Cp4.1LG18g06360 vs. TAIR10
Match: AT2G19180.1 (AT2G19180.1 unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.2e-21
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = 1 

Query: 48  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVV 107
           IE++++S +   ++E   ++KL++FV RIIV  STPDW+PF PGSSFWVPP +    K+ 
Sbjct: 45  IELEIDSKN---EAEAAILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPPHQITATKIA 104

Query: 108 DLFDKFVEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNE---VELE 167
           +L DK   PL++E S SL++  GWPC  FF          + P D    T  E   VEL+
Sbjct: 105 NLVDKVTNPLTEEESLSLSSPYGWPCSSFF----------IPPPDGSSSTQEEEASVELK 164

Query: 168 I------EVKTSTITD--NSNQPED 182
           I      EVK +   D   S +PED
Sbjct: 165 IPGNEMLEVKLAHYPDPIYSFKPED 176

[Close]
BLAST of Cp4.1LG18g06360 vs. TAIR10
Match: AT1G16840.4 (AT1G16840.4 unknown protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18
Identity = 61/168 (36.31%), Postives = 89/168 (52.98%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR  S+S S    +  +A   LL   PSS ++  R++S+   +    EID  ++S    
Sbjct: 1   MARSFSRSLSLSKGRFAAASSSLL---PSSHLVSFRSQSS-DRRGDLYEIDTSAASQSPS 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--RRTKPRKVVDLFDKFVEPLS 120
             +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP    ++   +  L  K   PL+
Sbjct: 61  DPL--IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIE 167
            E S S  +S GWP  D+F KG      +L    TE  +++E   E E
Sbjct: 121 HEESLSTNSSHGWPSSDYFLKGV---QPQLMETKTETTSNSESHSEDE 159

[Close]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match: gi|659107188|ref|XP_008453565.1| (PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 2.6e-73
Identity = 146/181 (80.66%), Postives = 159/181 (87.85%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     L +LIPSSF LGHRNRSTRSGK KFIEIDLESSSFGAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDK VEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFAK SISG TRLAP+DTE +TSN  ELEI+V+T T  DNSNQPE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match: gi|449457193|ref|XP_004146333.1| (PREDICTED: uncharacterized protein LOC101223203 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 9.9e-73
Identity = 144/181 (79.56%), Postives = 158/181 (87.29%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     L +LIPSSF LGHRNRSTRSGK KFIE+DLESSS+GAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDK VEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFAK SISG TRLAP+DTE +TSN  ELEI+VKT T  DNSN PE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVKTPTSKDNSNHPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match: gi|645234600|ref|XP_008223883.1| (PREDICTED: uncharacterized protein LOC103323657 [Prunus mume])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 91/188 (48.40%), Postives = 116/188 (61.70%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLE------- 60
           MAR+L+Q+     S +          +P S    HR RSTRSGKA+ IEIDL+       
Sbjct: 1   MARLLTQTLQLRQSLLHRPR------VPPSLTQAHRARSTRSGKAQLIEIDLDPSTSSSS 60

Query: 61  SSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKF 120
           SSS   DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  K 
Sbjct: 61  SSSPANDSEKLMLKKLDDIVQTILVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKL 120

Query: 121 VEPLSKEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTIT 180
            + L+ E S S+A  RGWPC  FF  G  SG+T    +D E + S EVE+E+EVK  T +
Sbjct: 121 ADQLTDEESLSVATDRGWPCSQFFVHG--SGSTETREVDMEAEGSAEVEVEVEVKVLTES 179

Query: 181 DNSNQPED 182
              ++ ED
Sbjct: 181 QKPSRCED 179

[Close]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match: gi|658037798|ref|XP_008354451.1| (PREDICTED: uncharacterized protein LOC103418080 [Malus domestica])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 86/183 (46.99%), Postives = 119/183 (65.03%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLE--SSSFG 60
           MAR+L+Q+     S ++        L+P S    HR RS+RSGKA+ IEI+L+  +SS  
Sbjct: 1   MARLLTQTLHLRQSLLRRP------LLPPSLTQAHRARSSRSGKAELIEIELDPSTSSSP 60

Query: 61  ADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLS 120
           +DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  K  + L+
Sbjct: 61  SDSEKLMLKKLDDIVQTIVVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKLADQLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDNSNQ 180
            E + S+A  RGWPC  FF  G  +G+     +DTE + S E+E+E+EVK  T +   ++
Sbjct: 121 DEETLSVATDRGWPCSQFFINGG-TGSAETREVDTEAEGSTEIEVEVEVKVLTDSQKPSR 175

Query: 181 PED 182
            ED
Sbjct: 181 CED 175

[Close]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match: gi|694359771|ref|XP_009359927.1| (PREDICTED: uncharacterized protein LOC103950448 [Pyrus x bretschneideri])

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-34
Identity = 83/177 (46.89%), Postives = 117/177 (66.10%), Query Frame = 1 

Query: 1   MARILSQSQSFISSKMQSAPLKLLLLIPSSFVLGHRNRSTRSGKAKFIEIDLE--SSSFG 60
           MAR+L+Q+     S ++        L+P S    HR RS+RSG+A+ IEI+L+  +SS  
Sbjct: 1   MARLLTQTLHLRQSLLRRP------LLPPSLTQAHRARSSRSGEAELIEIELDPSTSSSP 60

Query: 61  ADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKFVEPLS 120
           +DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  K  + L+
Sbjct: 61  SDSEKLMLKKLDDIVQTIVVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKLADQLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAKGSISGATRLAPLDTEFDTSNEVELEIEVKTSTITDN 176
            E + S+A  RGWPC  FF  G  +G+     +DTE + S E+E+E+EV+   +TD+
Sbjct: 121 DEETLSVATDRGWPCSKFFINGG-TGSAETREVDTEAEGSTEIEVEVEVEVKVLTDS 169

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g06360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g06360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZW6_CUCSA6.9e-7379.56Uncharacterized protein OS=Cucumis sativus GN=Csa_1G424870 PE=4 SV=1[more]
M5WHP1_PRUPE1.4e-3347.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012162mg PE=4 SV=1[more]
W9RJQ7_9ROSA4.5e-2441.01Uncharacterized protein OS=Morus notabilis GN=L484_000704 PE=4 SV=1[more]
A0A124SI81_CYNCS1.9e-2239.25Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009730 PE=4 ... [more]
A0A0K9RQI8_SPIOL9.5e-2241.36Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040400 PE=4 SV=1[more]
BLAST of Cp4.1LG18g06360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78890.12.9e-2240.69 unknown protein[more]
AT2G19180.14.2e-2141.38 unknown protein[more]
AT1G16840.41.5e-1836.31 unknown protein[more]
BLAST of Cp4.1LG18g06360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107188|ref|XP_008453565.1|2.6e-7380.66PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo][more]
gi|449457193|ref|XP_004146333.1|9.9e-7379.56PREDICTED: uncharacterized protein LOC101223203 [Cucumis sativus][more]
gi|645234600|ref|XP_008223883.1|1.4e-3448.40PREDICTED: uncharacterized protein LOC103323657 [Prunus mume][more]
gi|658037798|ref|XP_008354451.1|1.4e-3446.99PREDICTED: uncharacterized protein LOC103418080 [Malus domestica][more]
gi|694359771|ref|XP_009359927.1|2.4e-3446.89PREDICTED: uncharacterized protein LOC103950448 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g06360.1Cp4.1LG18g06360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33972FAMILY NOT NAMEDcoord: 2..170
score: 6.9
NoneNo IPR availablePANTHERPTHR33972:SF2EXPRESSED PROTEINcoord: 2..170
score: 6.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g06360Cucsa.081310Cucumber (Gy14) v1cgycpeB0141
Cp4.1LG18g06360CmaCh10G003780Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g06360CmaCh11G003670Cucurbita maxima (Rimu)cmacpeB132
Cp4.1LG18g06360CmoCh11G003680Cucurbita moschata (Rifu)cmocpeB108
Cp4.1LG18g06360CmoCh10G004080Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g06360Cla018852Watermelon (97103) v1cpewmB372
Cp4.1LG18g06360Csa1G424870Cucumber (Chinese Long) v2cpecuB351
Cp4.1LG18g06360MELO3C017432Melon (DHL92) v3.5.1cpemeB330
Cp4.1LG18g06360ClCG06G013570Watermelon (Charleston Gray)cpewcgB335
Cp4.1LG18g06360CSPI01G20520Wild cucumber (PI 183967)cpecpiB352
Cp4.1LG18g06360Lsi06G012000Bottle gourd (USVL1VR-Ls)cpelsiB301
Cp4.1LG18g06360MELO3C017432.2Melon (DHL92) v3.6.1cpemedB388
Cp4.1LG18g06360CsaV3_1G031850Cucumber (Chinese Long) v3cpecucB0430
Cp4.1LG18g06360Bhi02G000542Wax gourdcpewgoB0466
Cp4.1LG18g06360CsGy1G020340Cucumber (Gy14) v2cgybcpeB042
Cp4.1LG18g06360Carg15225Silver-seed gourdcarcpeB1103
Cp4.1LG18g06360Carg09048Silver-seed gourdcarcpeB0843
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g06360Cp4.1LG04g13160Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g06360Cucumber (Chinese Long) v3cpecucB0452
Cp4.1LG18g06360Cucumber (Chinese Long) v3cpecucB0453
Cp4.1LG18g06360Cucurbita pepo (Zucchini)cpecpeB114
Cp4.1LG18g06360Cucumber (Gy14) v1cgycpeB0174
Cp4.1LG18g06360Cucurbita maxima (Rimu)cmacpeB774
Cp4.1LG18g06360Cucurbita moschata (Rifu)cmocpeB729
Cp4.1LG18g06360Wild cucumber (PI 183967)cpecpiB372
Cp4.1LG18g06360Cucumber (Chinese Long) v2cpecuB373
Cp4.1LG18g06360Bottle gourd (USVL1VR-Ls)cpelsiB283
Cp4.1LG18g06360Watermelon (Charleston Gray)cpewcgB316
Cp4.1LG18g06360Watermelon (97103) v1cpewmB371
Cp4.1LG18g06360Melon (DHL92) v3.5.1cpemeB344
Cp4.1LG18g06360Cucumber (Gy14) v2cgybcpeB206
Cp4.1LG18g06360Cucumber (Gy14) v2cgybcpeB207