CmaCh10G003780 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G003780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Serine/arginine repetitive matrix protein 2, putative isoform 2
Location	Cma_Chr10 : 1734236 .. 1736263 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCCAAGTTGCAATCTGCGCCTTTGAAGATATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAGCCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCGAAGGTATTTATAAAATCTACGCATTTTTTCCCTATTGCGTTATGTTATTCGATTGATATTTGTTTAGCGGTTGATTAATGCGGGGATTGATGATTGAAAGTGGTGATTTATCGGGGTTATTAATTCTATCGCTTGTATTGATTTGGTGAACCGACTGAAGATTATGTGGTGCTTGGAATTTGTGTTATCTGCTTTTACTTCAGCGTGATAGAATTGCTGGATGTTCATATAAATTGAAGTGGTAAATCAGCCTTCCTCCTGTACAAATTGCTACTGCTTTGTTCGTGCATTTGAATTGGGGTATGCTTGTGATACCTTTATTTGATGGCTCTGGCCGATCTAATTCGAATTGTATCAATTAGGGAACAGCGGTGTCATGTTCATTTCTTTGAGGTATTATGATGCAATAGCTAGCTGCCCTTAAAAGCTTTGATTGTTTAGGTTGCAGGGTTGTTCTTGTGTCTTATAGTTACCGAAATTGCGGCGTAGAAGCCTACTGCGGGGTTTAATTTATCTGTGACCAAGTTTTATGTGTGAATAAAGTTCTCACGGAGTATTGCCCAAACAAGTGGCTAATGTAATTACAGAACAAAGTAGTTTGTACCACTATGACACCATACACATTGGGTTACTGCAATTTCACACAAAAAAGATTTGATGTGAACAGTTAGAGGATCGCCAATGTTAAAATGCCTTGACAATGTCTTGAGATTTTAGCTGAATCTTAATTCAGAATCATACTTTGCTGCTGCAGTCTGGATGTAAAATATGCAAGGCCCGAGGGAATATTGTATGAAAATTTATGATTAATGTCAACTGATTACTAGTCACGTGATTTTGTAGTTTCGAGTTGTTAAAAATAACTCGAAAGTCTAGATGACAAAGGGTGGTGCTTTTGTTGACATTTAGATTGCAAATTTTTGATTCAGCGGACATTACTTAATTACACAAACCATTCTAATTGTACCTATAGAAGGTGATAAGTATTAATAGAGCAAGCCTTCACTTTGTTGCCTTTTTCTTCATCTATCGCCCCCTGTTTTTCTTGAGGAATGTGAAATGTTCCGAGTGTCATTTGCTCGAACCTCAAACTTATAGATCTGTTTCCTTTCATTGTCTCTTCATTTTTGTCTAATTCCAGTTTCTCTATTTCTTGTTATCAGACCTAATTCAGGTGGCTGGTTGAGATATGGGAAAATGCTCTGATAATTGTGTGTATTGGCATAGCCATTTGATTTAGTGTAGTTATGACCATTTCATGGTTTATCTGGCCTAGAATGCAAAACTTTTCTAGTGAGACAAGACAAGCTTTCGATACGGTGTAGGATAGTGTTTCTTTTGTCTAGGTATGGTGCCTTGTCAAAGCAGAAGTATTATTTCAACCATTTCGCCTTAAAAACTGAGCTTATTTGCAGACCATAAAGGCCTTTTTTGAACTTTTTGTACCATTTATATTCATGGAATGATGATATTTCCTTGGAATAGGGTCTATATCTGGAGCAACTCGGTTGACTCCAGTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTCGGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGA

mRNA sequence

ATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCCAAGTTGCAATCTGCGCCTTTGAAGATATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAGCCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCGAAGGGTCTATATCTGGAGCAACTCGGTTGACTCCAGTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTCGGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGA

Coding sequence (CDS)

ATGGCTCGAATTTTGTCTCAATCGCAATCTTTCATTTCCTCCAAGTTGCAATCTGCGCCTTTGAAGATATTGCTGTTGATTCCGTCTTCCTTTGTTCTCGGTCATCGGAACCGCTCTACACGTTCTGGTAAGGCCAAGTTCATCGAAATTGACCTTGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTGGACGATTTTGTAGAGAGGATTATCGTTGAGCGATCGACTCCTGATTGGGTTCCGTTTGTGCCTGGTTCGTCATTTTGGGTTCCTCCTCGTCGTACTAAGCCACGCAAGGTGGTCGACCTGTTCGATAAATTGGTTGAGCCGCTCTCCAAAGAGGTGTCCCCTTCACTTGCTAACTCTCGTGGTTGGCCCTGCTTAGATTTCTTCGCCGAAGGGTCTATATCTGGAGCAACTCGGTTGACTCCAGTAGATACCGAGTTCGACACTTCAAATGAGGTGGAGTCGGAGATCGAGGTGAAGACATCAACAATTACAGATAACTCAAACCAGCCTGAGGATTGA

Protein sequence

MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSNQPED

Homology

[Close]

BLAST of CmaCh10G003780 vs. TrEMBL
Match: A0A0A0LZW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G424870 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.0e-71
Identity = 142/181 (78.45%), Postives = 158/181 (87.29%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     + +LIPSSF LGHRNRSTRSGK KFIE+DLESSS+GAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDKLVEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFA+ SISG TRL PVDTE +TSNE+  EI+VKT T  DNSN PE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNEL--EIDVKTPTSKDNSNHPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]

BLAST of CmaCh10G003780 vs. TrEMBL
Match: M5WHP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012162mg PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.3e-34
Identity = 92/189 (48.68%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE------- 60
           MAR+L+Q+     S L          +P S    HR RSTRSGKA+ IEIDL+       
Sbjct: 1   MARLLTQTLQLRHSLLHRPR------VPPSLTQAHRARSTRSGKAQLIEIDLDPSTSSSS 60

Query: 61  -SSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDK 120
            SSS   DSE L ++KLDD V+ I+++R+TPDW+PFVPGSSFWVPP R  P KV DL  K
Sbjct: 61  SSSSPANDSEKLMLKKLDDIVQTILIQRATPDWLPFVPGSSFWVPP-RLAPLKVTDLVGK 120

Query: 121 LVEPLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTI 180
           L + L+ E S S+A  RGWPC  FF  G  SG+T    VD E + S EVE E+EVK  T 
Sbjct: 121 LADQLTDEESLSVATDRGWPCSQFFVHG--SGSTETREVDMEAEGSAEVEVEVEVKVLTE 180

Query: 181 TDNSNQPED 182
           +   ++ ED
Sbjct: 181 SQKPSRCED 180

[Close]

BLAST of CmaCh10G003780 vs. TrEMBL
Match: W9RJQ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000704 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-25
Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE-SSSFGA 60
           MA++LSQ+ +   ++L    L+             R RST SG  +  EI+L  SSS G 
Sbjct: 1   MAKLLSQTLTLRRTQLSLNQLR-------------RFRSTLSGNGRLTEIELSPSSSEGG 60

Query: 61  DSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSK 120
           +SE L ++KLDD V R IV+R+TPDW+PF+PG SFWVPPRR    K  D   K+ + LS 
Sbjct: 61  ESEALMLKKLDDIVHRFIVQRATPDWLPFLPGYSFWVPPRRGS-MKFADFVGKIADHLSD 120

Query: 121 EVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSN 178
           E S SL + RGWP   FF +G   G  +L  VD E + + E+ESE+E +  T +++S+
Sbjct: 121 EESLSLCSDRGWPSSRFFVDG--HGFGQLGAVDAEAEEAAEMESEVEEEVLTDSEDSH 162

[Close]

BLAST of CmaCh10G003780 vs. TrEMBL
Match: A0A124SI81_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009730 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 76/186 (40.86%), Postives = 108/186 (58.06%), Query Frame = 1


Query: 1   MARILSQS--QSFISSKLQS-APLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSF 60
           MAR LS++  QS  SS L S    K+ +  P  F       S+RSGKA+ IE++LES   
Sbjct: 1   MARFLSKTLIQSTSSSSLNSFETFKLGVSQPHRF-------SSRSGKAQLIEVELES--- 60

Query: 61  GADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRK--VVDLFDKLVE 120
             + EV+ IRKL+D +  IIV +STPDW+PF+PGSS+WVPPRR +P    +V++ +KL  
Sbjct: 61  --EGEVVGIRKLEDVIHNIIVRQSTPDWLPFIPGSSYWVPPRRHRPESHGIVEVLEKLTN 120

Query: 121 PLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDN 180
           P++++ S SL  SRGWP   +F EG+       +PV             +E K     +N
Sbjct: 121 PMTEDESMSLNTSRGWPSSSYFLEGT-------SPV-----------HPVEAKAYNNEEN 156

Query: 181 SNQPED 182
            +QP+D
Sbjct: 181 MSQPKD 156

[Close]

BLAST of CmaCh10G003780 vs. TrEMBL
Match: W9QER2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016861 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22
Identity = 65/144 (45.14%), Postives = 86/144 (59.72%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE-SSSFGA 60
           MA++LSQ+ +   ++L    L+             R RST SG  +  EI+L  SSS G 
Sbjct: 1   MAKLLSQTLTLRRTQLSLNQLR-------------RFRSTLSGNGRLTEIELSPSSSEGG 60

Query: 61  DSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSK 120
           +SE L ++KLDD V R IV+R+TPDW+PF+PG SFWVPPRR    K  D   K+ + LS 
Sbjct: 61  ESEALMLKKLDDIVHRFIVQRATPDWLPFLPGYSFWVPPRRGS-MKFADFVGKIADHLSD 120

Query: 121 EVSPSLANSRGWPCLDFFAEGSIS 144
           E S SL + RGWP   FF +G+ S
Sbjct: 121 EESLSLCSDRGWPSSRFFVDGTCS 130

[Close]

BLAST of CmaCh10G003780 vs. TAIR10
Match: AT1G78890.1 (AT1G78890.1 unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRN-----RSTRSGKAKFIEIDLESS 60
           MAR LS S S    +  +A L    L+PSS  +  R+     RS  +      EID+ + 
Sbjct: 1   MARSLSPSLSLSRYRFAAASL----LLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAAD 60

Query: 61  SFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVE 120
                     + KL+D V RI+V RS PDW+PFVPG+SFWVPP R++   +  L +KL  
Sbjct: 61  PL--------VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLAN 120

Query: 121 PLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIE 167
           P+S E S S+++ RGWPC D+F +G      +   V+TE  ++    SE E
Sbjct: 121 PISDEESISISSVRGWPCSDYFIKG-----VKPQSVETEMTSNTAYHSEDE 154

[Close]

BLAST of CmaCh10G003780 vs. TAIR10
Match: AT2G19180.1 (AT2G19180.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-22
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1


Query: 48  IEIDLESSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVV 107
           IE++++S +   ++E   ++KL++FV RIIV  STPDW+PF PGSSFWVPP +    K+ 
Sbjct: 45  IELEIDSKN---EAEAAILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPPHQITATKIA 104

Query: 108 DLFDKLVEPLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEV 167
           +L DK+  PL++E S SL++  GWPC  FF          + P D    T  E E+ +E+
Sbjct: 105 NLVDKVTNPLTEEESLSLSSPYGWPCSSFF----------IPPPDGSSSTQEE-EASVEL 151

Query: 168 K 169
           K
Sbjct: 165 K 151

[Close]

BLAST of CmaCh10G003780 vs. TAIR10
Match: AT1G16840.4 (AT1G16840.4 unknown protein)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-19
Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR  S+S S    +  +A   +L   PSS ++  R++S+   +    EID  ++S    
Sbjct: 1   MARSFSRSLSLSKGRFAAASSSLL---PSSHLVSFRSQSS-DRRGDLYEIDTSAASQSPS 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPP--RRTKPRKVVDLFDKLVEPLS 120
             +  I+KL+D V RI V R+ PDW+PFVPG+S+WVPP    ++   +  L  KL  PL+
Sbjct: 61  DPL--IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIE 167
            E S S  +S GWP  D+F +G      +L    TE  +++E  SE E
Sbjct: 121 HEESLSTNSSHGWPSSDYFLKGV---QPQLMETKTETTSNSESHSEDE 159

[Close]

BLAST of CmaCh10G003780 vs. NCBI nr
Match: gi|659107188|ref|XP_008453565.1| (PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-72
Identity = 144/181 (79.56%), Postives = 159/181 (87.85%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     + +LIPSSF LGHRNRSTRSGK KFIEIDLESSSFGAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDKLVEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFA+ SISG TRL PVDTE +TSNE+  EI+V+T T  DNSNQPE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNEL--EIDVQTPTSKDNSNQPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]

BLAST of CmaCh10G003780 vs. NCBI nr
Match: gi|449457193|ref|XP_004146333.1| (PREDICTED: uncharacterized protein LOC101223203 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71
Identity = 142/181 (78.45%), Postives = 158/181 (87.29%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLESSSFGAD 60
           MAR+ S SQSFISSK Q     + +LIPSSF LGHRNRSTRSGK KFIE+DLESSS+GAD
Sbjct: 1   MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEVDLESSSYGAD 60

Query: 61  SEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLSKE 120
           SE+LAIRKLDDFV+RIIVERSTPDW+PFVPGSSFWVPPRR KPR+VVDLFDKLVEP++KE
Sbjct: 61  SEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKE 120

Query: 121 VSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSNQPE 180
            SPSLAN+RGWPCLDFFA+ SISG TRL PVDTE +TSNE+  EI+VKT T  DNSN PE
Sbjct: 121 DSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNEL--EIDVKTPTSKDNSNHPE 174

Query: 181 D 182
           D
Sbjct: 181 D 174

[Close]

BLAST of CmaCh10G003780 vs. NCBI nr
Match: gi|645234600|ref|XP_008223883.1| (PREDICTED: uncharacterized protein LOC103323657 [Prunus mume])

HSP 1 Score: 156.0 bits (393), Expect = 6.3e-35
Identity = 94/188 (50.00%), Postives = 116/188 (61.70%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE------- 60
           MAR+L+Q+     S L          +P S    HR RSTRSGKA+ IEIDL+       
Sbjct: 1   MARLLTQTLQLRQSLLHRPR------VPPSLTQAHRARSTRSGKAQLIEIDLDPSTSSSS 60

Query: 61  SSSFGADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKL 120
           SSS   DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  KL
Sbjct: 61  SSSPANDSEKLMLKKLDDIVQTILVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKL 120

Query: 121 VEPLSKEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTIT 180
            + L+ E S S+A  RGWPC  FF  G  SG+T    VD E + S EVE E+EVK  T +
Sbjct: 121 ADQLTDEESLSVATDRGWPCSQFFVHG--SGSTETREVDMEAEGSAEVEVEVEVKVLTES 179

Query: 181 DNSNQPED 182
              ++ ED
Sbjct: 181 QKPSRCED 179

[Close]

BLAST of CmaCh10G003780 vs. NCBI nr
Match: gi|658037798|ref|XP_008354451.1| (PREDICTED: uncharacterized protein LOC103418080 [Malus domestica])

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 89/183 (48.63%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE--SSSFG 60
           MAR+L+Q+     S L+        L+P S    HR RS+RSGKA+ IEI+L+  +SS  
Sbjct: 1   MARLLTQTLHLRQSLLRRP------LLPPSLTQAHRARSSRSGKAELIEIELDPSTSSSP 60

Query: 61  ADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLS 120
           +DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  KL + L+
Sbjct: 61  SDSEKLMLKKLDDIVQTIVVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKLADQLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDNSNQ 180
            E + S+A  RGWPC  FF  G  +G+     VDTE + S E+E E+EVK  T +   ++
Sbjct: 121 DEETLSVATDRGWPCSQFFINGG-TGSAETREVDTEAEGSTEIEVEVEVKVLTDSQKPSR 175

Query: 181 PED 182
            ED
Sbjct: 181 CED 175

[Close]

BLAST of CmaCh10G003780 vs. NCBI nr
Match: gi|694359771|ref|XP_009359927.1| (PREDICTED: uncharacterized protein LOC103950448 [Pyrus x bretschneideri])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 86/177 (48.59%), Postives = 117/177 (66.10%), Query Frame = 1


Query: 1   MARILSQSQSFISSKLQSAPLKILLLIPSSFVLGHRNRSTRSGKAKFIEIDLE--SSSFG 60
           MAR+L+Q+     S L+        L+P S    HR RS+RSG+A+ IEI+L+  +SS  
Sbjct: 1   MARLLTQTLHLRQSLLRRP------LLPPSLTQAHRARSSRSGEAELIEIELDPSTSSSP 60

Query: 61  ADSEVLAIRKLDDFVERIIVERSTPDWVPFVPGSSFWVPPRRTKPRKVVDLFDKLVEPLS 120
           +DSE L ++KLDD V+ I+V+R+TPDW+PFVPGSSFWVPPRR  P KV DL  KL + L+
Sbjct: 61  SDSEKLMLKKLDDIVQTIVVQRATPDWLPFVPGSSFWVPPRRA-PLKVTDLVGKLADQLT 120

Query: 121 KEVSPSLANSRGWPCLDFFAEGSISGATRLTPVDTEFDTSNEVESEIEVKTSTITDN 176
            E + S+A  RGWPC  FF  G  +G+     VDTE + S E+E E+EV+   +TD+
Sbjct: 121 DEETLSVATDRGWPCSKFFINGG-TGSAETREVDTEAEGSTEIEVEVEVEVKVLTDS 169

The following BLAST results are available for this feature:

BLAST of CmaCh10G003780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh10G003780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZW6_CUCSA	1.0e-71	78.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G424870 PE=4 SV=1	[more]
M5WHP1_PRUPE	6.3e-34	48.68	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012162mg PE=4 SV=1	[more]
W9RJQ7_9ROSA	3.1e-25	42.70	Uncharacterized protein OS=Morus notabilis GN=L484_000704 PE=4 SV=1	[more]
A0A124SI81_CYNCS	1.7e-23	40.86	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009730 PE=4 ...	[more]
W9QER2_9ROSA	1.9e-22	45.14	Uncharacterized protein OS=Morus notabilis GN=L484_016861 PE=4 SV=1	[more]

BLAST of CmaCh10G003780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78890.1	2.2e-22	38.01	unknown protein	[more]
AT2G19180.1	6.5e-22	42.15	unknown protein	[more]
AT1G16840.4	6.7e-19	36.31	unknown protein	[more]

BLAST of CmaCh10G003780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107188\|ref\|XP_008453565.1\|	3.8e-72	79.56	PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo]	[more]
gi\|449457193\|ref\|XP_004146333.1\|	1.4e-71	78.45	PREDICTED: uncharacterized protein LOC101223203 [Cucumis sativus]	[more]
gi\|645234600\|ref\|XP_008223883.1\|	6.3e-35	50.00	PREDICTED: uncharacterized protein LOC103323657 [Prunus mume]	[more]
gi\|658037798\|ref\|XP_008354451.1\|	1.1e-34	48.63	PREDICTED: uncharacterized protein LOC103418080 [Malus domestica]	[more]
gi\|694359771\|ref\|XP_009359927.1\|	1.4e-34	48.59	PREDICTED: uncharacterized protein LOC103950448 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003780.1	CmaCh10G003780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33972	FAMILY NOT NAMED	coord: 2..170 score: 1.7
None	No IPR available	PANTHER	PTHR33972:SF2	EXPRESSED PROTEIN	coord: 2..170 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G003780	Cucsa.081310	Cucumber (Gy14) v1	cgycmaB0146
CmaCh10G003780	Cla018852	Watermelon (97103) v1	cmawmB071
CmaCh10G003780	Csa1G424870	Cucumber (Chinese Long) v2	cmacuB058
CmaCh10G003780	MELO3C017432	Melon (DHL92) v3.5.1	cmameB067
CmaCh10G003780	ClCG06G013570	Watermelon (Charleston Gray)	cmawcgB071
CmaCh10G003780	CSPI01G20520	Wild cucumber (PI 183967)	cmacpiB060
CmaCh10G003780	CmoCh11G003680	Cucurbita moschata (Rifu)	cmacmoB068
CmaCh10G003780	CmoCh10G004080	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G003780	Lsi06G012000	Bottle gourd (USVL1VR-Ls)	cmalsiB075
CmaCh10G003780	Cp4.1LG18g06360	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G003780	Cp4.1LG04g13160	Cucurbita pepo (Zucchini)	cmacpeB092
CmaCh10G003780	MELO3C017432.2	Melon (DHL92) v3.6.1	cmamedB070
CmaCh10G003780	CsaV3_1G031850	Cucumber (Chinese Long) v3	cmacucB0068
CmaCh10G003780	Cla97C06G123050	Watermelon (97103) v2	cmawmbB081
CmaCh10G003780	Bhi02G000542	Wax gourd	cmawgoB0076
CmaCh10G003780	CsGy1G020340	Cucumber (Gy14) v2	cgybcmaB015
CmaCh10G003780	Carg15225	Silver-seed gourd	carcmaB1091
CmaCh10G003780	Carg09048	Silver-seed gourd	carcmaB0828

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh10G003780	CmaCh11G003670	Cucurbita maxima (Rimu)	cmacmaB072

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G003780	Cucurbita maxima (Rimu)	cmacmaB117
CmaCh10G003780	Cucumber (Gy14) v1	cgycmaB0174
CmaCh10G003780	Cucurbita moschata (Rifu)	cmacmoB096
CmaCh10G003780	Wild cucumber (PI 183967)	cmacpiB075
CmaCh10G003780	Cucumber (Chinese Long) v2	cmacuB077
CmaCh10G003780	Melon (DHL92) v3.5.1	cmameB075
CmaCh10G003780	Watermelon (Charleston Gray)	cmawcgB045
CmaCh10G003780	Watermelon (97103) v1	cmawmB067
CmaCh10G003780	Cucurbita pepo (Zucchini)	cmacpeB076
CmaCh10G003780	Bottle gourd (USVL1VR-Ls)	cmalsiB050
CmaCh10G003780	Cucumber (Gy14) v2	cgybcmaB155
CmaCh10G003780	Cucumber (Gy14) v2	cgybcmaB156
CmaCh10G003780	Melon (DHL92) v3.6.1	cmamedB080
CmaCh10G003780	Cucumber (Chinese Long) v3	cmacucB0083
CmaCh10G003780	Cucumber (Chinese Long) v3	cmacucB0084
CmaCh10G003780	Watermelon (97103) v2	cmawmbB057