Cp4.1LG18g03220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGGGGATAGTCCTCGAACTTTGAATCAATCACAAAAAAATTTCTAATCCTGAAAGTACAAAAACCCCTGAAATTTCTCATCCACCATATCTGAACCAGAACTCAAGAATTAGCCCCTAAATTCTCTCACGGTCCATTTGGTTCGAGCTTTTGCGTCTCGGTACACTTCTTCTATAAGCGCTGAATTACCATTTTATGTTCATCTCAAGGCGCCCAATTCTGTTTTACGTTCAAAATCAAAGCATTTTTCTGGGTTTGATGCATGATTTCTCCGAGTTCAAGGGTTAAAATGGTTCGAGTTTCGTTGATTTATGTTTATTTTGCAGTACCGATTGCTTCGCTATGGATTCCGGATCAAGTGGCGAGGAACCTACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGGTACGTTCATAAACTATGGATTCTTGCAATTTATAGTCTCTGTAGCCTAAGTGCTACTTATGATAGGAATTGACAATTATCAATATCAGGCATGTTAATTTGTAGTTTGGAGAGGCTTCGAGATAACTTAGACGCCTAGTGTCACAACCTAACTATGAAGAGAGTAGGATGTGGATTCTGTATAGTGTGTTAGATGATGCACTGTCCTCCTTGGTTGCGTGAGCGTGTCAAGATCATGACGTTGCACGGTTGAAAAAGTGGGACCGTGAGACCTAGGATGAACTTAGAGAGTTCCAATTTCCTTAGTAAAGCAAAAGAAAAATTAAAGAAGTAACTAATGAGTTCAGTGCTGCTGACTGATACCATGTTGAATTTGTAAGGGCTTGCTTGTCTTCACATCTTGTAGTTTTCTGAGGCTAAGGTGTGTGTGTACTGTGTAATATCATGCTTGGGACGCACATGTTTGAAAGTGACGTCGTTGCTAACTAGTAAGTAAAGGCGTGTCGACATTTAACCAAGGGTTGGTTTTGGAGTCGAGTGACGTTATTGAGGGCTAAATATTAGTTTTTTGTAAGTTTAACCATTGCAAGGGGGAGATTGTCGACATTTAAGATGATAATTCTTGTCTTATCTACTGAGCTATGTACGTGTGATTAGATAAAGTTTCAAGTTGTATTGTAAGTAAAGGTGCGTTGAGATTTAACCAAGGGGTTGGTTTTACGGTTTGGTTGGTTTTGGAGCCGAGTGACGTTATTGAGTGATAAATATTAGTTTTTTTGTAAGTTCAACCATTGCACGGGTGGAGGGTCGTCAACCTTTAAGATGATAATTGTTTTGTGGCTCTCGGGACATCCTCGCAAGAGAGGATCATTGGTTAACTAGGTCTATGAAAGAATAGATTGTATTGTACGAAAGAGAGTATTACGCTCCTGATTTTCGCCTTCTTTGAAGCTCTTATTAGCACGGTTCGGGTCAGTTTGTGTACTCTTAGATTGAATGAATTTGGATTTACTGTGTGGCTCAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCCGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGTCTTCTATCCAAGAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTACAAACCTTCTAACCAACAGATTTTATATCATCACCCTATACTGTGGATGACATCCAATTGTGTCTTACGAGCACAGGTCGGTATCGGACATAATTTTCAGATGCACGCTACAGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATCGATTAGCCCATTCCGGGGATTGGATTTTCGCTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTAGGGAAATATTCATCATCTATGGTTTTTATAGAAATTGTGGGGCGGTGTCTGTAATAGTGACGTTGTGTTCGACAGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATCGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAATACAACCCAAGAATCTGTGAGCTCCAACATCACTCATTGTGAACTTAGAAAGGATGGCAAAATTGTTCTGTCATTAACCCTCTTCAATATGCTTTTACAAGTAGCTTTAGATTTGGAGCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCTCCCTCTAGCCAATTTTGTCTTTTTAGTTCACTCTATTTGTACATTTGAAAATCAATCAAGGCTGGAAATTTTGTTGGCCTTTC TGGAGGGGATAGTCCTCGAACTTTGAATCAATCACAAAAAAATTTCTAATCCTGAAAGTACAAAAACCCCTGAAATTTCTCATCCACCATATCTGAACCAGAACTCAAGAATTAGCCCCTAAATTCTCTCACGGTCCATTTGGTTCGAGCTTTTGCGTCTCGTACCGATTGCTTCGCTATGGATTCCGGATCAAGTGGCGAGGAACCTACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCCGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGTCTTCTATCCAAGAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTCGGTATCGGACATAATTTTCAGATGCACGCTACAGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATCGATTAGCCCATTCCGGGGATTGGATTTTCGCTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATCGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAATACAACCCAAGAATCTGTGAGCTCCAACATCACTCATTGTGAACTTAGAAAGGATGGCAAAATTGTTCTGTCATTAACCCTCTTCAATATGCTTTTACAAGTAGCTTTAGATTTGGAGCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCTCTCCCTCTAGCCAATTTTGTCTTTTTAGTTCACTCTATTTGTACATTTGAAAATCAATCAAGGCTGGAAATTTTGTTGGCCTTTC ATGGATTCCGGATCAAGTGGCGAGGAACCTACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCCGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGTCTTCTATCCAAGAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTCGGTATCGGACATAATTTTCAGATGCACGCTACAGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATCGATTAGCCCATTCCGGGGATTGGATTTTCGCTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATCGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAA MDSGSSGEEPTSWEDLCSINLMPSELFLKFRKELRGFRVGINLEFYNAPCNEYEAKLVVKPLYPEQRWKFIYEPIRQDIRLLSKKIPVTRFLNLQVGIGHNFQMHATGWKWKLTTCLGGDGVSRIRNKSSISPFRGLDFRFGWRADYVLPEITGSLGTGEALFNMNSGKLEASLDRIEAIVTHSDEGCDG
BLAST of Cp4.1LG18g03220 vs. TrEMBL
Match: A0A0A0M256_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G596460 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.7e-101 Identity = 175/186 (94.09%), Postives = 182/186 (97.85%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. TrEMBL
Match: V4UIR0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009634mg PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 6.7e-87 Identity = 146/184 (79.35%), Postives = 170/184 (92.39%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. TrEMBL
Match: A0A067KFY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07484 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.4e-84 Identity = 141/184 (76.63%), Postives = 168/184 (91.30%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. TrEMBL
Match: D7TCF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01150 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.8e-84 Identity = 139/184 (75.54%), Postives = 170/184 (92.39%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. TrEMBL
Match: A0A061GL65_THECC (OBP3-responsive gene 4 isoform 1 OS=Theobroma cacao GN=TCM_037536 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.1e-84 Identity = 143/184 (77.72%), Postives = 169/184 (91.85%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. TAIR10
Match: AT2G06010.1 (AT2G06010.1 OBP3-responsive gene 4) HSP 1 Score: 307.8 bits (787), Expect = 4.8e-84 Identity = 139/181 (76.80%), Postives = 162/181 (89.50%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. NCBI nr
Match: gi|659100085|ref|XP_008450920.1| (PREDICTED: uncharacterized protein LOC103492367 [Cucumis melo]) HSP 1 Score: 378.3 bits (970), Expect = 8.2e-102 Identity = 176/186 (94.62%), Postives = 183/186 (98.39%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. NCBI nr
Match: gi|449452566|ref|XP_004144030.1| (PREDICTED: uncharacterized protein LOC101208324 [Cucumis sativus]) HSP 1 Score: 376.7 bits (966), Expect = 2.4e-101 Identity = 175/186 (94.09%), Postives = 182/186 (97.85%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. NCBI nr
Match: gi|568841590|ref|XP_006474741.1| (PREDICTED: uncharacterized protein LOC102617374 [Citrus sinensis]) HSP 1 Score: 329.7 bits (844), Expect = 3.3e-87 Identity = 147/184 (79.89%), Postives = 171/184 (92.93%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. NCBI nr
Match: gi|567921580|ref|XP_006452796.1| (hypothetical protein CICLE_v10009634mg [Citrus clementina]) HSP 1 Score: 328.2 bits (840), Expect = 9.7e-87 Identity = 146/184 (79.35%), Postives = 170/184 (92.39%), Query Frame = 1
BLAST of Cp4.1LG18g03220 vs. NCBI nr
Match: gi|743930676|ref|XP_011009592.1| (PREDICTED: uncharacterized protein LOC105114668 [Populus euphratica]) HSP 1 Score: 324.3 bits (830), Expect = 1.4e-85 Identity = 144/183 (78.69%), Postives = 168/183 (91.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |