CmaCh10G007620 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTCATCCACCATATCTGAACCAGAACTCAAGAATTAGCCCCTAAATTCTCTCACGGTCCATTTGGTTCGAGCTTTTGCGTCTCGGTACACTTCTTCTATAAGCGCTGAATTACCATTTTATGTTCATCTCAAGGCGCTCAATTCTCTTTTACGCTCAAAATCAAAGCAGTTTTCTGGGTTTGATGCATGATTTTCTCCAAGTTCAAGGGTTAAAATGGTTCGAGTTTCGTTGATTTATGTTTATTTTGCAGTACCGATTGCTTCGCTATGGATTCCGGATCAAGTGGCGAGGAACCCACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGGTACTTTTATGAACTATGGATTCTTACAATATATAGTCTCTGTCTTATAATTTAGATGATTTGAGGATTTTGTTTACTGCTAATTATGGCTTTGGAGGGTGTAGTTCTTAGCCTAAGTGCTACTTAGATAGTTCTTGATTCTGTGGGCTTCATTTTCAAGGCTTTTATGATAGGAATTGACAATTATCAATATCAGGCATATTAATTTGTAGTTTGGAGAGGCTTGGAGATAACTTAGTCGCATAGTGTCACAACCTAACTATGAAGAGAGTAGGATGTGGACTCTGTATAGTGTGTTAGATGATGCACCATCCTCCTTGGTCGCGTGAGTGTGTCAAGATCACGACGTTGCACGGTTGAAAAAGTGGGACTGTGAGACCTAGGATGAACTTAAAGAGTTCCAATTTCCTTAGTAAAGCAAAAGAAAAATGAAAGAAGTAACTAATGAGTTTAGTGCTGCTGACGATACCATGTTAAATTTGTAAGGGCTTGCTTGTCTTCACATCTTGTACTTTTCTGAGCCTATGGTGTGTGTTTACTGTGTAATATCATGCTTGGGATGCACATGTTTGAAAGTGATGTCGTTGCTAACTAGTAAGTAAAGGTGTGTCGTCATTTAACCAAGGGGTTGGTTTTGGAGTCGAGTGACGTTATTGAGTGATAAATATTACTTTTTTGTAAGTTTAACCATTGCAAGGGAGAGACCATCGACATTTAAGATGATAATTGTTGTCTTATCTCCTGAGCTATGTACGTGTGATTAGATAAAGTTTCAAGTTGTATTGTAAGTAAAGGTGCGTTGAGATTTAACCAAGGGGTTGGTTTTGGAGCCGAGTGACGTTATCGAGTGATAAATATTAGTTTTTTGTAAGTTCAACTATTGCACGGGTGGAGGGTCGTCAACCTTTAAGATGATAATTGTTTTGTAGCTCTCGGGACATCCTCGCAACAGAGGATCATTGGTTAACTAGGTCTATGAAAGAATAGATTGTATTGTACGAAAGAGAGTATTACACTCCTGATTTTCGCCTTCTTTGAAGCTCTTATTAGCACGGTTCAGGTCAGTTTGTGTACTCTTAGATTGAATGAATTTGGATTTACTGTTTGGCTCAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCGGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGCCTTCTATCCAAAAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTACAAAGCTTCTAACCAACAGATTATATATCATCACCTACACTATACCGTCTTACCCAAGAAGAAGAAAGTCATCCAATTCTGTTGTCTTACAAGCACAGGTCGGTATCGGGCATAATTTTCAGATGCACGCCACGGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATTGATTAGCCCATTCCGGGGATTGGATTTCCGTTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTATGGAAATATTCATCATCTATGGTTTTTATAGAAATTGTGGGGTGGTGTCTGTAATAGTGACGTTGTGTTCGACAGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATAGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAATACAACCCAAGAATTTGTGAGCTCCAACATCACTCATTGTGAACTTGGAAAGGATGGCAAAATTGTTCTGTCATTAACCCTCTTCAATATGCTTTTACAAGTAGCTTTAGATTTGGAGCTTCTCTCTCTCTCTCCCTCTCTCTCCCTCTCCAATTTTGTTTTTCTAGTTCACTTTATTTGTACATTTGAAAATCAATCAAGGCTGGAAATTTTGTTGGCCTTTCA TTTCTCATCCACCATATCTGAACCAGAACTCAAGAATTAGCCCCTAAATTCTCTCACGGTCCATTTGGTTCGAGCTTTTGCGTCTCGTACCGATTGCTTCGCTATGGATTCCGGATCAAGTGGCGAGGAACCCACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCGGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGCCTTCTATCCAAAAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTCGGTATCGGGCATAATTTTCAGATGCACGCCACGGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATTGATTAGCCCATTCCGGGGATTGGATTTCCGTTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATAGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAATACAACCCAAGAATTTGTGAGCTCCAACATCACTCATTGTGAACTTGGAAAGGATGGCAAAATTGTTCTGTCATTAACCCTCTTCAATATGCTTTTACAAGTAGCTTTAGATTTGGAGCTTCTCTCTCTCTCTCCCTCTCTCTCCCTCTCCAATTTTGTTTTTCTAGTTCACTTTATTTGTACATTTGAAAATCAATCAAGGCTGGAAATTTTGTTGGCCTTTCA ATGGATTCCGGATCAAGTGGCGAGGAACCCACTTCTTGGGAAGATCTTTGCAGTATCAATTTGATGCCCTCGGAATTGTTTTTGAAGTTTCGTAAAGAGTTGCGCGGCTTTCGAGTCGGTATAAATTTGGAGTTCTATAATGCTCCATGTAATGAATATGAAGCCAAGCTTGTGGTGAAGCCATTATATCCGGAGCAGCGATGGAAGTTTATCTATGAGCCAATCCGTCAAGATATACGCCTTCTATCCAAAAAGATTCCTGTTACCAGATTTCTAAATCTTCAGGTCGGTATCGGGCATAATTTTCAGATGCACGCCACGGGTTGGAAATGGAAGCTAACGACATGTTTGGGTGGAGACGGTGTATCTCGCATACGGAACAAGTCATTGATTAGCCCATTCCGGGGATTGGATTTCCGTTTCGGATGGAGGGCAGATTACGTGCTTCCTGAAATTACAGGGTCTCTAGGCACCGGCGAAGCGTTGTTTAACATGAACTCGGGAAAGCTGGAAGCGTCACTTGATAGAATTGAGGCCATTGTCACTCACAGTGATGAAGGTTGTGATGGATAA MDSGSSGEEPTSWEDLCSINLMPSELFLKFRKELRGFRVGINLEFYNAPCNEYEAKLVVKPLYPEQRWKFIYEPIRQDIRLLSKKIPVTRFLNLQVGIGHNFQMHATGWKWKLTTCLGGDGVSRIRNKSLISPFRGLDFRFGWRADYVLPEITGSLGTGEALFNMNSGKLEASLDRIEAIVTHSDEGCDG
BLAST of CmaCh10G007620 vs. TrEMBL
Match: A0A0A0M256_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G596460 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 6.3e-101 Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 1
BLAST of CmaCh10G007620 vs. TrEMBL
Match: V4UIR0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009634mg PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.6e-86 Identity = 145/184 (78.80%), Postives = 169/184 (91.85%), Query Frame = 1
BLAST of CmaCh10G007620 vs. TrEMBL
Match: A0A067KFY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07484 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.8e-84 Identity = 141/184 (76.63%), Postives = 167/184 (90.76%), Query Frame = 1
BLAST of CmaCh10G007620 vs. TrEMBL
Match: A0A061GL65_THECC (OBP3-responsive gene 4 isoform 1 OS=Theobroma cacao GN=TCM_037536 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.1e-84 Identity = 143/184 (77.72%), Postives = 168/184 (91.30%), Query Frame = 1
BLAST of CmaCh10G007620 vs. TrEMBL
Match: D7TCF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01150 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 7.0e-84 Identity = 138/184 (75.00%), Postives = 169/184 (91.85%), Query Frame = 1
BLAST of CmaCh10G007620 vs. TAIR10
Match: AT2G06010.1 (AT2G06010.1 OBP3-responsive gene 4) HSP 1 Score: 307.0 bits (785), Expect = 8.2e-84 Identity = 139/181 (76.80%), Postives = 161/181 (88.95%), Query Frame = 1
BLAST of CmaCh10G007620 vs. NCBI nr
Match: gi|659100085|ref|XP_008450920.1| (PREDICTED: uncharacterized protein LOC103492367 [Cucumis melo]) HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101 Identity = 175/186 (94.09%), Postives = 182/186 (97.85%), Query Frame = 1
BLAST of CmaCh10G007620 vs. NCBI nr
Match: gi|449452566|ref|XP_004144030.1| (PREDICTED: uncharacterized protein LOC101208324 [Cucumis sativus]) HSP 1 Score: 374.8 bits (961), Expect = 9.0e-101 Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 1
BLAST of CmaCh10G007620 vs. NCBI nr
Match: gi|568841590|ref|XP_006474741.1| (PREDICTED: uncharacterized protein LOC102617374 [Citrus sinensis]) HSP 1 Score: 327.8 bits (839), Expect = 1.3e-86 Identity = 146/184 (79.35%), Postives = 170/184 (92.39%), Query Frame = 1
BLAST of CmaCh10G007620 vs. NCBI nr
Match: gi|567921580|ref|XP_006452796.1| (hypothetical protein CICLE_v10009634mg [Citrus clementina]) HSP 1 Score: 326.2 bits (835), Expect = 3.7e-86 Identity = 145/184 (78.80%), Postives = 169/184 (91.85%), Query Frame = 1
BLAST of CmaCh10G007620 vs. NCBI nr
Match: gi|743930676|ref|XP_011009592.1| (PREDICTED: uncharacterized protein LOC105114668 [Populus euphratica]) HSP 1 Score: 322.4 bits (825), Expect = 5.3e-85 Identity = 143/183 (78.14%), Postives = 167/183 (91.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |