Cp4.1LG17g09350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g09350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSomatic embryogenesis receptor kinase
LocationCp4.1LG17 : 7205562 .. 7206345 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGTAAACTGAAGGCATACCAGAGAAATTTTCGTTCACATTCTCAAATTCTACGCTCTAACTTTTTATGTATATGGTGTTTCAATTACAAAAATTTAGAGGGACAAATTAGAAGAAAACATCTTAATTACCTTAAGGGTTTGAGCATTTTTGAATGTGTGTGGTTGAAATGACAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTAGTAAATCCATGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGTAACACATTCTACTCTCTCAAACTTTAACCTCATACATAGCCTTATTCTTTTTATTACCTGTGATTTCAACACAATCTTACTTTCTGTTTGAAGGGACCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGTAAGATTGAGCTTTTCAAATGTTTATCTCTGTATAGTATAATGTTATCTACTCAGCTTGTAACATGAATTTTGATGAAATTTTCAGGATCATAAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGGATATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCATTGGTTTTCTTGTAA

mRNA sequence

ATGGCCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTAGTAAATCCATGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGGACCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGATCATAAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGGATATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCATTGGTTTTCTTGTAA

Coding sequence (CDS)

ATGGCCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTAGTAAATCCATGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGGACCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGATCATAAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGGATATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCATTGGTTTTCTTGTAA

Protein sequence

MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSLPPSLGNLSSLVFL
Homology
[Close]
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-38
Identity = 80/136 (58.82%), Postives = 98/136 (72.06%), Query Frame = 1 

Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L +S+     N EGDAL + +A LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFS 126
           V RVDLGNA LSG LVPQL  L NLQ+L +  NN++G +P ++G L+NL SL L  N F+
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFT 133

Query: 127 GSLPPSLGNLSSLVFL 143
           G +P SLG L  L FL
Sbjct: 134 GPIPDSLGKLFKLRFL 149

[Close]
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-37
Identity = 77/120 (64.17%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 23  NSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLV 82
           N EGDAL   +  LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+V RVDLGNA LSG LV
Sbjct: 27  NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLV 86

Query: 83  PQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSLPPSLGNLSSLVFL 142
           P+L  L NLQ+L +  NN++G IP  +G L+NL SL L  N FSG +P SLG LS L FL
Sbjct: 87  PELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFL 146

[Close]
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 1 

Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L   ++    N+EGDAL+A K  L DPN VLQSWD +LV PCTWFH+TCN +N+
Sbjct: 13  LILVLDLVLRVSG---NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 72

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFS 126
           VTRVDLGNA+LSG LV QL  LPNLQ+L +  NN++G IP+++G L+ L SL L  N  S
Sbjct: 73  VTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLS 132

Query: 127 GSLPPSLGNLSSLVFL 143
           G +P +LG L  L FL
Sbjct: 133 GPIPSTLGRLKKLRFL 145

[Close]
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-32
Identity = 77/138 (55.80%), Postives = 91/138 (65.94%), Query Frame = 1 

Query: 8   VFFLSLASSIAAVLCNSEGDALAAWKAELV--DP-NNVLQSWDPSLVNPCTWFHITCNIN 67
           ++ L L +    V  N+EGDAL   K  L   DP NNVLQSWD +LV PCTWFH+TCN  
Sbjct: 15  LYLLLLFNFTLRVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPE 74

Query: 68  NTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNK 127
           N VTRVDLGNA LSG LVP+L  L NLQ+L +  NN++G IP+E+G L  L SL L  N 
Sbjct: 75  NKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANS 134

Query: 128 FSGSLPPSLGNLSSLVFL 143
            SG +P SLG L  L FL
Sbjct: 135 ISGPIPSSLGKLGKLRFL 152

[Close]
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-30
Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = 1 

Query: 3   SFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVD---PNNVLQSWDPSLVNPCTWFHI 62
           S R  ++ +     ++ V   ++ DAL A ++ L      NN+LQSW+ + V PC+WFH+
Sbjct: 5   SSRGFIWLILFLDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHV 64

Query: 63  TCNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLF 122
           TCN  N+VTR+DLG+A+LSG LVPQLA LPNLQ+L + +NN++G IP+E+G L  L SL 
Sbjct: 65  TCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLD 124

Query: 123 LSKNKFSGSLPPSLGNLSSLVFL 143
           L  N  SG +P SLG L  L FL
Sbjct: 125 LFANNISGPIPSSLGKLGKLRFL 147

[Close]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match: A0A0A0KAC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091960 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.1e-44
Identity = 98/144 (68.06%), Postives = 113/144 (78.47%), Query Frame = 1 

Query: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M +F+ LVFFLS  S IA+ L NSEGDALAAWKA+LVDPN+VLQSWDP+LVNPCTWFHIT
Sbjct: 1   MITFKYLVFFLSFTSLIASTLSNSEGDALAAWKAQLVDPNSVLQSWDPTLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQF---LIINDNNLSGVIPKEIGILSNLRS 120
           C+ NN V RVDLGNA+LSG L+        L+F    I+ DNNLSG IPKE+G L+NL+S
Sbjct: 61  CDSNNFVVRVDLGNANLSGLLINM------LRFGTCRIVYDNNLSGSIPKELGKLTNLKS 120

Query: 121 LFLSKNKFSGSLPPSLGNLSSLVF 142
           LFL  N FSG LP SLGNLSSL+F
Sbjct: 121 LFLYNNYFSGPLPSSLGNLSSLLF 138

[Close]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match: A0A068VH86_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000206001 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 88/135 (65.19%), Postives = 99/135 (73.33%), Query Frame = 1 

Query: 8   VFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTV 67
           +F L  A +IA   CNSEGDAL AWK  L DPNNVLQSWDP+LVNPCTW H+TCN  N+V
Sbjct: 6   IFVLVFALAIAYADCNSEGDALNAWKVSLADPNNVLQSWDPTLVNPCTWLHVTCNDENSV 65

Query: 68  TRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSG 127
           TRVDLG A LSGPLVPQL  L NLQ+L +  N LSG IP  +G L+NL SL L  N+ SG
Sbjct: 66  TRVDLGVAGLSGPLVPQLGLLANLQYLEVYGNKLSGAIPSALGNLTNLVSLDLYHNRLSG 125

Query: 128 SLPPSLGNLSSLVFL 143
           S+P  LGNL SL FL
Sbjct: 126 SIPAVLGNLRSLRFL 140

[Close]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match: M1CY02_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030009 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39
Identity = 85/130 (65.38%), Postives = 99/130 (76.15%), Query Frame = 1 

Query: 10  FLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTR 69
           FL  A +I AV CNSEGDAL A+K  + DPNNVLQSWDP+LVNPCTWFH+TCN  N+V R
Sbjct: 8   FLVGALAIIAVECNSEGDALNAFKTNVADPNNVLQSWDPTLVNPCTWFHVTCNSQNSVVR 67

Query: 70  VDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSL 129
           VDLG+A+LSG LVPQL  L NLQ+L I  N++SG IP E+G L+ L SL L  NK SG +
Sbjct: 68  VDLGDANLSGSLVPQLGMLSNLQYLQIQSNSISGAIPSELGNLTKLVSLGLENNKLSGLI 127

Query: 130 PPSLGNLSSL 140
           P SLGNL SL
Sbjct: 128 PSSLGNLKSL 137

[Close]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match: A0A0D9X4X1_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-39
Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 8   VFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTV 67
           V  L L   +A V+ N EGDAL + +  LVDPNNVLQSWDP+LVNPCTWFH+TCN +N+V
Sbjct: 11  VLLLRLVLPVARVVANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNNDNSV 70

Query: 68  TRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSG 127
            RVDLGNA+LSG LVPQL  L NLQ+L +  NN+SG IP E+G L+NL SL L  N F+G
Sbjct: 71  IRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNISGTIPSELGNLTNLVSLDLYLNNFTG 130

Query: 128 SLPPSLGNLSSLVFL 143
            +P SLGNL  L FL
Sbjct: 131 PIPDSLGNLLKLRFL 145

[Close]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match: Q8H6W9_CAPAN (Leucine-rich repeat protein OS=Capsicum annuum GN=LRR1 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-39
Identity = 83/130 (63.85%), Postives = 101/130 (77.69%), Query Frame = 1 

Query: 10  FLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTR 69
           FL  A +I AV CNSEGDAL A+K  ++DPNN LQSWDP+LVNPCTW H+TCNI N+VTR
Sbjct: 8   FLVGALAIIAVECNSEGDALNAFKMNMLDPNNALQSWDPTLVNPCTWLHVTCNIQNSVTR 67

Query: 70  VDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSL 129
           VDLG A+LSG L PQL  L NLQ+L + +N++SG IP+E+  L+NL SL L  NK SG++
Sbjct: 68  VDLGGANLSGILTPQLGVLYNLQYLQVENNSISGAIPRELRNLTNLLSLGLENNKLSGTI 127

Query: 130 PPSLGNLSSL 140
           P SLGNL SL
Sbjct: 128 PSSLGNLKSL 137

[Close]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match: AT1G34210.1 (AT1G34210.1 somatic embryogenesis receptor-like kinase 2)

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 80/136 (58.82%), Postives = 98/136 (72.06%), Query Frame = 1 

Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L +S+     N EGDAL + +A LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFS 126
           V RVDLGNA LSG LVPQL  L NLQ+L +  NN++G +P ++G L+NL SL L  N F+
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFT 133

Query: 127 GSLPPSLGNLSSLVFL 143
           G +P SLG L  L FL
Sbjct: 134 GPIPDSLGKLFKLRFL 149

[Close]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match: AT1G71830.1 (AT1G71830.1 somatic embryogenesis receptor-like kinase 1)

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 77/120 (64.17%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 23  NSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLV 82
           N EGDAL   +  LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+V RVDLGNA LSG LV
Sbjct: 27  NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLV 86

Query: 83  PQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSLPPSLGNLSSLVFL 142
           P+L  L NLQ+L +  NN++G IP  +G L+NL SL L  N FSG +P SLG LS L FL
Sbjct: 87  PELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFL 146

[Close]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match: AT5G21090.1 (AT5G21090.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 154.5 bits (389), Expect = 5.1e-38
Identity = 80/143 (55.94%), Postives = 101/143 (70.63%), Query Frame = 1 

Query: 3   SFRDLVFFLSLASSIAA---VLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHI 62
           ++R  +F  SL  ++A    V  NSEGDAL A +  L DP++VLQSWDP+LVNPCTWFH+
Sbjct: 5   NYRWELFAASLTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHV 64

Query: 63  TCNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLF 122
           TCN +N VTRVDLGN++LSG L P+L  L +LQ+L +  NN+ G IP E+G L NL SL 
Sbjct: 65  TCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKNLISLD 124

Query: 123 LSKNKFSGSLPPSLGNLSSLVFL 143
           L  N  +G +P SLG L SLVFL
Sbjct: 125 LYNNNLTGIVPTSLGKLKSLVFL 147

[Close]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match: AT4G33430.2 (AT4G33430.2 BRI1-associated receptor kinase)

HSP 1 Score: 150.6 bits (379), Expect = 7.3e-37
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 1 

Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L   ++    N+EGDAL+A K  L DPN VLQSWD +LV PCTWFH+TCN +N+
Sbjct: 13  LILVLDLVLRVSG---NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 72

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFS 126
           VTRVDLGNA+LSG LV QL  LPNLQ+L +  NN++G IP+++G L+ L SL L  N  S
Sbjct: 73  VTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLS 132

Query: 127 GSLPPSLGNLSSLVFL 143
           G +P +LG L  L FL
Sbjct: 133 GPIPSTLGRLKKLRFL 145

[Close]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match: AT2G13790.1 (AT2G13790.1 somatic embryogenesis receptor-like kinase 4)

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-33
Identity = 77/138 (55.80%), Postives = 91/138 (65.94%), Query Frame = 1 

Query: 8   VFFLSLASSIAAVLCNSEGDALAAWKAELV--DP-NNVLQSWDPSLVNPCTWFHITCNIN 67
           ++ L L +    V  N+EGDAL   K  L   DP NNVLQSWD +LV PCTWFH+TCN  
Sbjct: 15  LYLLLLFNFTLRVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPE 74

Query: 68  NTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNK 127
           N VTRVDLGNA LSG LVP+L  L NLQ+L +  NN++G IP+E+G L  L SL L  N 
Sbjct: 75  NKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANS 134

Query: 128 FSGSLPPSLGNLSSLVFL 143
            SG +P SLG L  L FL
Sbjct: 135 ISGPIPSSLGKLGKLRFL 152

[Close]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match: gi|778711764|ref|XP_011656793.1| (PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-52
Identity = 106/141 (75.18%), Postives = 121/141 (85.82%), Query Frame = 1 

Query: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M +F+ LVFFLS  S IA+ L NSEGDALAAWKA+LVDPN+VLQSWDP+LVNPCTWFHIT
Sbjct: 1   MITFKYLVFFLSFTSLIASTLSNSEGDALAAWKAQLVDPNSVLQSWDPTLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFL 120
           C+ NN V RVDLGNA+LSG LVP+LANL NLQ+LI+ DNNLSG IPKE+G L+NL+SLFL
Sbjct: 61  CDSNNFVVRVDLGNANLSGLLVPELANLKNLQYLIVYDNNLSGSIPKELGKLTNLKSLFL 120

Query: 121 SKNKFSGSLPPSLGNLSSLVF 142
             N FSG LP SLGNLSSL+F
Sbjct: 121 YNNYFSGPLPSSLGNLSSLLF 141

[Close]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match: gi|700191219|gb|KGN46423.1| (hypothetical protein Csa_6G091960 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-44
Identity = 98/144 (68.06%), Postives = 113/144 (78.47%), Query Frame = 1 

Query: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M +F+ LVFFLS  S IA+ L NSEGDALAAWKA+LVDPN+VLQSWDP+LVNPCTWFHIT
Sbjct: 1   MITFKYLVFFLSFTSLIASTLSNSEGDALAAWKAQLVDPNSVLQSWDPTLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQF---LIINDNNLSGVIPKEIGILSNLRS 120
           C+ NN V RVDLGNA+LSG L+        L+F    I+ DNNLSG IPKE+G L+NL+S
Sbjct: 61  CDSNNFVVRVDLGNANLSGLLINM------LRFGTCRIVYDNNLSGSIPKELGKLTNLKS 120

Query: 121 LFLSKNKFSGSLPPSLGNLSSLVF 142
           LFL  N FSG LP SLGNLSSL+F
Sbjct: 121 LFLYNNYFSGPLPSSLGNLSSLLF 138

[Close]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match: gi|659119894|ref|XP_008459899.1| (PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 82/113 (72.57%), Postives = 100/113 (88.50%), Query Frame = 1 

Query: 29  LAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLVPQLANL 88
           L AWKA+LVDPNNVLQSWDP+LVNPCTWFHITC+ NN V RVDLGNA+LSGPL+P+L++L
Sbjct: 4   LHAWKAQLVDPNNVLQSWDPTLVNPCTWFHITCDSNNFVVRVDLGNANLSGPLIPELSSL 63

Query: 89  PNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSLPPSLGNLSSLVF 142
             LQ+L++ DN+LSG IP+E+GIL+NL+SLFL  N FSG LP SLG+LSSL+F
Sbjct: 64  KKLQYLMVYDNSLSGSIPRELGILTNLKSLFLYNNYFSGPLPSSLGSLSSLLF 116

[Close]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match: gi|743880211|ref|XP_011036145.1| (PREDICTED: somatic embryogenesis receptor kinase 1-like [Populus euphratica])

HSP 1 Score: 175.3 bits (443), Expect = 7.8e-41
Identity = 84/132 (63.64%), Postives = 101/132 (76.52%), Query Frame = 1 

Query: 11  LSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRV 70
           L +A +IA V CN EGD L +WK +L DPNNVLQSWDP+L NPC WFH+TCN NN+VTRV
Sbjct: 9   LVIAVAIATVDCNLEGDVLNSWKTQLFDPNNVLQSWDPTLANPCAWFHVTCNSNNSVTRV 68

Query: 71  DLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSGSLP 130
           DLGNA LSGPL+P+L  L NLQ+L +  NN+SG IP E+G L+ L SL L  NK SG +P
Sbjct: 69  DLGNAGLSGPLIPELGLLANLQYLEVFRNNISGPIPTELGNLTKLVSLDLYLNKLSGPIP 128

Query: 131 PSLGNLSSLVFL 143
            SLGNL SL+F+
Sbjct: 129 ASLGNLGSLLFM 140

[Close]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match: gi|661877064|emb|CDP19038.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-40
Identity = 88/135 (65.19%), Postives = 99/135 (73.33%), Query Frame = 1 

Query: 8   VFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTV 67
           +F L  A +IA   CNSEGDAL AWK  L DPNNVLQSWDP+LVNPCTW H+TCN  N+V
Sbjct: 6   IFVLVFALAIAYADCNSEGDALNAWKVSLADPNNVLQSWDPTLVNPCTWLHVTCNDENSV 65

Query: 68  TRVDLGNASLSGPLVPQLANLPNLQFLIINDNNLSGVIPKEIGILSNLRSLFLSKNKFSG 127
           TRVDLG A LSGPLVPQL  L NLQ+L +  N LSG IP  +G L+NL SL L  N+ SG
Sbjct: 66  TRVDLGVAGLSGPLVPQLGLLANLQYLEVYGNKLSGAIPSALGNLTNLVSLDLYHNRLSG 125

Query: 128 SLPPSLGNLSSLVFL 143
           S+P  LGNL SL FL
Sbjct: 126 SIPAVLGNLRSLRFL 140

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g09350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SERK2_ARATH2.1e-3858.82Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV... [more]
SERK1_ARATH3.1e-3764.17Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV... [more]
BAK1_ARATH1.3e-3555.88BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thalia... [more]
SERK4_ARATH5.1e-3255.80Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV... [more]
SERK5_ARATH1.6e-3048.25Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV... [more]
BLAST of Cp4.1LG17g09350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAC4_CUCSA3.1e-4468.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091960 PE=4 SV=1[more]
A0A068VH86_COFCA1.2e-4065.19Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00000206001 PE=4 SV=1[more]
M1CY02_SOLTU1.8e-3965.38Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030009 PE=4 SV=1[more]
A0A0D9X4X1_9ORYZ3.9e-3962.22Uncharacterized protein OS=Leersia perrieri PE=3 SV=1[more]
Q8H6W9_CAPAN5.1e-3963.85Leucine-rich repeat protein OS=Capsicum annuum GN=LRR1 PE=2 SV=2[more]
BLAST of Cp4.1LG17g09350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G34210.11.2e-3958.82 somatic embryogenesis receptor-like kinase 2[more]
AT1G71830.11.7e-3864.17 somatic embryogenesis receptor-like kinase 1[more]
AT5G21090.15.1e-3855.94 Leucine-rich repeat (LRR) family protein[more]
AT4G33430.27.3e-3755.88 BRI1-associated receptor kinase[more]
AT2G13790.12.9e-3355.80 somatic embryogenesis receptor-like kinase 4[more]
BLAST of Cp4.1LG17g09350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711764|ref|XP_011656793.1|2.0e-5275.18PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis sativus][more]
gi|700191219|gb|KGN46423.1|4.4e-4468.06hypothetical protein Csa_6G091960 [Cucumis sativus][more]
gi|659119894|ref|XP_008459899.1|1.6e-4172.57PREDICTED: somatic embryogenesis receptor kinase 1-like [Cucumis melo][more]
gi|743880211|ref|XP_011036145.1|7.8e-4163.64PREDICTED: somatic embryogenesis receptor kinase 1-like [Populus euphratica][more]
gi|661877064|emb|CDP19038.1|1.7e-4065.19unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013210LRR_N_plant-typ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003824 catalytic activity
molecular_function GO:0019199 transmembrane receptor protein kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g09350.1Cp4.1LG17g09350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013210Leucine-rich repeat-containing N-terminal, plant-typePFAMPF08263LRRNT_2coord: 23..62
score: 3.7
NoneNo IPR availablePANTHERPTHR27001FAMILY NOT NAMEDcoord: 4..142
score: 6.1
NoneNo IPR availablePANTHERPTHR27001:SF224SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1coord: 4..142
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g09350CmaCh08G000160Cucurbita maxima (Rimu)cmacpeB914
Cp4.1LG17g09350CmoCh08G000170Cucurbita moschata (Rifu)cmocpeB851
Cp4.1LG17g09350Cla001490Watermelon (97103) v1cpewmB341
Cp4.1LG17g09350Csa6G091960Cucumber (Chinese Long) v2cpecuB322
Cp4.1LG17g09350ClCG06G001830Watermelon (Charleston Gray)cpewcgB298
Cp4.1LG17g09350CSPI06G07470Wild cucumber (PI 183967)cpecpiB323
Cp4.1LG17g09350Lsi09G017580Bottle gourd (USVL1VR-Ls)cpelsiB249
Cp4.1LG17g09350MELO3C022345.2Melon (DHL92) v3.6.1cpemedB332
Cp4.1LG17g09350CsaV3_6G007870Cucumber (Chinese Long) v3cpecucB0403
Cp4.1LG17g09350Bhi12G002138Wax gourdcpewgoB0389
Cp4.1LG17g09350CsGy6G007500Cucumber (Gy14) v2cgybcpeB783
Cp4.1LG17g09350Carg03815Silver-seed gourdcarcpeB1359
Cp4.1LG17g09350Carg11572Silver-seed gourdcarcpeB0022
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g09350Cp4.1LG12g09970Cucurbita pepo (Zucchini)cpecpeB170
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g09350Cucumber (Gy14) v1cgycpeB0911
Cp4.1LG17g09350Cucurbita maxima (Rimu)cmacpeB389
Cp4.1LG17g09350Cucurbita moschata (Rifu)cmocpeB352
Cp4.1LG17g09350Melon (DHL92) v3.5.1cpemeB284