Carg03815 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03815
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Somatic embryogenesis receptor-like kinase
Location	Cucurbita_argyrosperma_scaffold_011 : 159973 .. 161396 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGTAAACTGAAGGCATACCGGAGAAATTTTCGTTCACATTCTCAAATTCTACGCTCTAACTTTTTATGTATATGGTGTTTCAATTACAAAAATTTAGAGGGACAAATTAGAAGAAAACATCTTAATTACCTTAAGGGTTTGAGCATTTTTGAATGTGTGTGGTTGAAATGACAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTTGTAAATCCGTGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGTAACACATTCTACTGTCTCAAACTTTAACCTCATACATAGCCTTACTCTTTTTATTACCTGTGATTTAAACACAATCTTATTTTCTGTTTGAAGGGATCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGTAAGATTTAGCTTTTCAAATGTTTATCTCTGTATAGTATAATGTTATCTACTAAGCTTGTAACATGAATTTTGATGAAATTTTCAGGATGATTAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGTTTATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCTTTGGTTTTCTTGTAAGTGGCCAGCTGAAATGGTCATTTTTTGAGGTTCAAAAAGCAGTGATTTTTACGAAGATGTTTGCCATAAAACAACATACAATTTATATACTTTTTTATTTGGTATAGTGAAGCACATGACAACAGTTTTAGTGGAATAATTCCTGCATCTTTTGGGGCGTTGACTTCTTTGAAGAATTTGTAAGCCTTTGTGTGTTGCCACTTTGTCTTTGAAATTTAGAAGCCATCTTTTGGGGCTGTGAACTTGTGTTCTACAGGAGATTGGACAACAACAATTTTAGCGGCAACATCCCCTTTACTCTTCTGCAACTTGTGAACTTTGGCAATCTTCAGCTACTGTGAGTTTGCTTATAATCAATATCTTTAACCAAGTTTTGAAACTGAAAAAATAGTTTTTAAAGTTGGTTTGTTTTATCTTTATGGTCAGGAATGTTTCACTAAACTCGTTTATGGGGAGTGTTCGCCCGACTAATTCATCAGGTAAAAGAATAAAACTAAGATCATAGCTCAATATATATATATATATATATATATATATGAATAAAGAATAAACTCGTTTTTGAGATTTGAATTGTTGTTGGTTGTGGACAGCAGAGATGGCAGTGACTACAATAATACAAGACCCAAAAGCTCCAAACTAA

mRNA sequence

ATGGTCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTTGTAAATCCGTGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGGATCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGATGATTAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGTTTATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCTTTGGTTTTCTTTGAAGCACATGACAACAGTTTTAGTGGAATAATTCCTGCATCTTTTGGGGCGTTGACTTCTTTGAAGAATTTGAGATTGGACAACAACAATTTTAGCGGCAACATCCCCTTTACTCTTCTGCAACTTGTGAACTTTGGCAATCTTCAGCTACTGAATGTTTCACTAAACTCGTTTATGGGGAGTGTTCGCCCGACTAATTCATCAGCAGAGATGGCAGTGACTACAATAATACAAGACCCAAAAGCTCCAAACTAA

Coding sequence (CDS)

ATGGTCAGTTTCAGAGATTTGGTTTTCTTTCTATCATTGGCTTCTTCCATTGCTGCAGTCCTCTGCAACTCAGAAGGGGATGCTCTTGCTGCATGGAAGGCTGAACTGGTTGATCCAAACAATGTCCTCCAAAGCTGGGACCCGTCTCTTGTAAATCCGTGCACTTGGTTCCACATCACCTGCAACATCAATAACACGGTCACCCGAGTGGATCTTGGCAATGCTAGTCTCTCCGGACCCCTCGTTCCCCAACTCGCAAACTTGCCAAATCTTCAGTTCTTGATGATTAACGACAACAATTTGAGTGGGGTAATTCCAAAGGAGATAGGTTTATTGAGCAATCTGAGGAGTTTGTTCCTGTCCAAAAACAAGTTCTCAGGGTCTTTACCACCTTCCTTGGGAAATTTGAGCTCTTTGGTTTTCTTTGAAGCACATGACAACAGTTTTAGTGGAATAATTCCTGCATCTTTTGGGGCGTTGACTTCTTTGAAGAATTTGAGATTGGACAACAACAATTTTAGCGGCAACATCCCCTTTACTCTTCTGCAACTTGTGAACTTTGGCAATCTTCAGCTACTGAATGTTTCACTAAACTCGTTTATGGGGAGTGTTCGCCCGACTAATTCATCAGCAGAGATGGCAGTGACTACAATAATACAAGACCCAAAAGCTCCAAACTAA

Protein sequence

MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINDNNLSGVIPKEIGLLSNLRSLFLSKNKFSGSLPPSLGNLSSLVFFEAHDNSFSGIIPASFGALTSLKNLRLDNNNFSGNIPFTLLQLVNFGNLQLLNVSLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN

Homology

[Close]

BLAST of Carg03815 vs. NCBI nr
Match: XP_023515128.1 (leucine-rich repeat protein 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 2.1e-52
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M SFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT
Sbjct: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120
           CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFL+INXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 227
           XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN
Sbjct: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 226

[Close]

BLAST of Carg03815 vs. NCBI nr
Match: XP_022960104.1 (leucine-rich repeat protein 1-like isoform X1 [Cucurbita moschata] >XP_022960105.1 leucine-rich repeat protein 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 3.6e-52
Identity = 223/226 (98.67%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFH+T
Sbjct: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHVT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120
           CNINNTVTRVDLGNASLSGPLVP+LANLP+LQFLMINXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  CNINNTVTRVDLGNASLSGPLVPRLANLPHLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 227
           XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN
Sbjct: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 226

[Close]

BLAST of Carg03815 vs. NCBI nr
Match: XP_023004379.1 (leucine-rich repeat protein 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 213.8 bits (543), Expect = 6.2e-52
Identity = 222/226 (98.23%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M SFRDLVFFLSLASSIAAVLCNSEGDALAAWK+ELVDPNNVLQSWDPSLVNPCTWFHIT
Sbjct: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKSELVDPNNVLQSWDPSLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120
           CNINNTVTRVDLGNASLSGPL+PQLANLPNLQFL+INXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  CNINNTVTRVDLGNASLSGPLIPQLANLPNLQFLIINXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 227
           XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN
Sbjct: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 226

[Close]

BLAST of Carg03815 vs. NCBI nr
Match: XP_023515129.1 (leucine-rich repeat protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           M SFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT
Sbjct: 1   MASFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120
           CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFL+INXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLIINXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 227
           XXXXXXXXXXXXXXXXLNSFMGSVRPTNSS EMAVTTIIQDPKAPN
Sbjct: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSS-EMAVTTIIQDPKAPN 225

[Close]

BLAST of Carg03815 vs. NCBI nr
Match: XP_022960106.1 (leucine-rich repeat protein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 2.6e-50
Identity = 222/226 (98.23%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
           MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFH+T
Sbjct: 1   MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHVT 60

Query: 61  CNINNTVTRVDLGNASLSGPLVPQLANLPNLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120
           CNINNTVTRVDLGNASLSGPLVP+LANLP+LQFLMINXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  CNINNTVTRVDLGNASLSGPLVPRLANLPHLQFLMINXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSSAEMAVTTIIQDPKAPN 227
           XXXXXXXXXXXXXXXXLNSFMGSVRPTNSS EMAVTTIIQDPKAPN
Sbjct: 181 XXXXXXXXXXXXXXXXLNSFMGSVRPTNSS-EMAVTTIIQDPKAPN 225

[Close]

BLAST of Carg03815 vs. TAIR10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2)

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-28
Identity = 58/88 (65.91%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L +S+     N EGDAL + +A LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFL 95
           V RVDLGNA LSG LVPQL  L NLQ+L
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYL 101

[Close]

BLAST of Carg03815 vs. TAIR10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1)

HSP 1 Score: 114.4 bits (285), Expect = 9.2e-26
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 23 NSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLV 82
          N EGDAL   +  LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+V RVDLGNA LSG LV
Sbjct: 27 NLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLV 86

Query: 83 PQLANLPNLQFL 95
          P+L  L NLQ+L
Sbjct: 87 PELGVLKNLQYL 98

[Close]

BLAST of Carg03815 vs. TAIR10
Match: AT4G33430.2 (BRI1-associated receptor kinase)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 7  LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
          L+  L L   ++    N+EGDAL+A K  L DPN VLQSWD +LV PCTWFH+TCN +N+
Sbjct: 13 LILVLDLVLRVSG---NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNS 72

Query: 67 VTRVDLGNASLSGPLVPQLANLPNLQF 94
          VTRVDLGNA+LSG LV QL  LPNLQ+
Sbjct: 73 VTRVDLGNANLSGQLVMQLGQLPNLQY 96

[Close]

BLAST of Carg03815 vs. TAIR10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 3  SFRDLVFFLSLASSIA---AVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHI 62
          ++R  +F  SL  ++A    V  NSEGDAL A +  L DP++VLQSWDP+LVNPCTWFH+
Sbjct: 5  NYRWELFAASLTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHV 64

Query: 63 TCNINNTVTRVDLGNASLSGPLVPQLANLPNLQF 94
          TCN +N VTRVDLGN++LSG L P+L  L +LQ+
Sbjct: 65 TCNQDNRVTRVDLGNSNLSGHLAPELGKLEHLQY 98

[Close]

BLAST of Carg03815 vs. TAIR10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 23 NSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVDLGNASLSGPLV 82
          NSEGDAL A +  L DP+NV+QSWDP+LVNPCTWFH+TCN ++ VTR+DLGN++LSG LV
Sbjct: 28 NSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTRLDLGNSNLSGHLV 87

Query: 83 PQLANLPNLQFL 95
          P+L  L +LQ+L
Sbjct: 88 PELGKLEHLQYL 99

[Close]

BLAST of Carg03815 vs. Swiss-Prot
Match: sp|Q8H6W9|LRR1_CAPAN (Leucine-rich repeat protein 1 OS=Capsicum annuum OX=4072 GN=LRR1 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 9.4e-28
Identity = 59/87 (67.82%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 10 FLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTR 69
          FL  A +I AV CNSEGDAL A+K  ++DPNN LQSWDP+LVNPCTW H+TCNI N+VTR
Sbjct: 8  FLVGALAIIAVECNSEGDALNAFKMNMLDPNNALQSWDPTLVNPCTWLHVTCNIQNSVTR 67

Query: 70 VDLGNASLSGPLVPQLANLPNLQFLMI 97
          VDLG A+LSG L PQL  L NLQ+L +
Sbjct: 68 VDLGGANLSGILTPQLGVLYNLQYLQV 94

[Close]

BLAST of Carg03815 vs. Swiss-Prot
Match: sp|B8BB68|BAK1_ORYSI (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 8  VFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTV 67
          V  L L    A VL N EGDAL + +  LVDPNNVLQSWDP+LVNPCTWFH+TCN +N+V
Sbjct: 11 VLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNNDNSV 70

Query: 68 TRVDLGNASLSGPLVPQLANLPNLQFL 95
           RVDLGNA+LSG LVPQL  L NLQ+L
Sbjct: 71 IRVDLGNAALSGTLVPQLGQLKNLQYL 97

[Close]

BLAST of Carg03815 vs. Swiss-Prot
Match: sp|Q6Z4U4|BAK1_ORYSJ (LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 8  VFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTV 67
          V  L L    A VL N EGDAL + +  LVDPNNVLQSWDP+LVNPCTWFH+TCN +N+V
Sbjct: 11 VLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNNDNSV 70

Query: 68 TRVDLGNASLSGPLVPQLANLPNLQFL 95
           RVDLGNA+LSG LVPQL  L NLQ+L
Sbjct: 71 IRVDLGNAALSGTLVPQLGQLKNLQYL 97

[Close]

BLAST of Carg03815 vs. Swiss-Prot
Match: sp|Q9XIC7|SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 58/88 (65.91%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 7   LVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNT 66
           L+  L L +S+     N EGDAL + +A LVDPNNVLQSWDP+LVNPCTWFH+TCN  N+
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 67  VTRVDLGNASLSGPLVPQLANLPNLQFL 95
           V RVDLGNA LSG LVPQL  L NLQ+L
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYL 101

[Close]

BLAST of Carg03815 vs. Swiss-Prot
Match: sp|Q7XV05|SERK2_ORYSJ (LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9   FFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVT 68
           F   +A +++ V  N+EGDAL + +  L D NNVLQSWDP+LVNPCTWFH+TCN +N+V 
Sbjct: 18  FVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVI 77

Query: 69  RVDLGNASLSGPLVPQLANLPNLQFL 95
           RVDLGNA LSG LVPQL  L NLQ+L
Sbjct: 78  RVDLGNAQLSGALVPQLGQLKNLQYL 103

[Close]

BLAST of Carg03815 vs. TrEMBL
Match: tr|A0A2P5BT04|A0A2P5BT04_PARAD (LRR domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_213080 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.2e-31
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 12 SLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVD 71
          S+A ++A V CNSEGDAL AWK +L DPNNVLQSW+P+LVNPCTWFHITCNI N+VTRVD
Sbjct: 13 SIAITVAYVECNSEGDALYAWKTKLKDPNNVLQSWNPNLVNPCTWFHITCNIQNSVTRVD 72

Query: 72 LGNASLSGPLVPQLANLPNLQFLMIN 98
          LGNA LSGPLVP+L NL NLQ+L +N
Sbjct: 73 LGNAGLSGPLVPELGNLTNLQYLEVN 98

[Close]

BLAST of Carg03815 vs. TrEMBL
Match: tr|A0A2P4KHP7|A0A2P4KHP7_QUESU (Lrr receptor kinase bak1 OS=Quercus suber OX=58331 GN=CFP56_51030 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.4e-30
Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 5  RDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNIN 64
          R LV F+  A +IA+V CNSEGDAL +WK +LVDPN VLQSWDP+L+NPCTW+H+TCN+N
Sbjct: 4  RFLVCFV-FAVAIASVDCNSEGDALISWKLKLVDPNGVLQSWDPTLINPCTWYHVTCNVN 63

Query: 65 NTVTRVDLGNASLSGPLVPQLANLPNLQFLMI 97
          N+VTRVDLGNA LSGPLVPQL  L NLQ+L +
Sbjct: 64 NSVTRVDLGNAGLSGPLVPQLGTLANLQYLEV 94

[Close]

BLAST of Carg03815 vs. TrEMBL
Match: tr|A0A2R6QQ96|A0A2R6QQ96_ACTCH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16306 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29
Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 10 FLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTR 69
          FL  A ++ AV CNSEGD L AWK +LVDPNNVLQSWDP+L NPCTWFHITCN NN V R
Sbjct: 8  FLVFALAVVAVECNSEGDDLFAWKTKLVDPNNVLQSWDPTLYNPCTWFHITCNSNNRVVR 67

Query: 70 VDLGNASLSGPLVPQLANLPNLQFLMI 97
          VDLGNA LSGPLVPQL NL  LQ+L +
Sbjct: 68 VDLGNAGLSGPLVPQLGNLTYLQYLQV 94

[Close]

BLAST of Carg03815 vs. TrEMBL
Match: tr|A0A2P5F238|A0A2P5F238_9ROSA (Somatic embryogenesis receptor-like kinase OS=Trema orientalis OX=63057 GN=TorRG33x02_124270 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-29
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 12 SLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHITCNINNTVTRVD 71
          S+A  +A V CNSEGDAL AWK +L DPNNVLQSW+P+LVNPCTWFHITC+I+N+VTRVD
Sbjct: 13 SIAIVVAYVECNSEGDALYAWKTKLKDPNNVLQSWNPNLVNPCTWFHITCDIHNSVTRVD 72

Query: 72 LGNASLSGPLVPQLANLPNLQFLMI 97
          LGNA LSGPLVP+L NL NLQ+L +
Sbjct: 73 LGNAGLSGPLVPELGNLTNLQYLEV 97

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BLAST of Carg03815 vs. TrEMBL
Match: tr|A0A0A0KAC4|A0A0A0KAC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091960 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28
Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MVSFRDLVFFLSLASSIAAVLCNSEGDALAAWKAELVDPNNVLQSWDPSLVNPCTWFHIT 60
          M++F+ LVFFLS  S IA+ L NSEGDALAAWKA+LVDPN+VLQSWDP+LVNPCTWFHIT
Sbjct: 1  MITFKYLVFFLSFTSLIASTLSNSEGDALAAWKAQLVDPNSVLQSWDPTLVNPCTWFHIT 60

Query: 61 CNINNTVTRVDLGNASLSGPLVPQL 86
          C+ NN V RVDLGNA+LSG L+  L
Sbjct: 61 CDSNNFVVRVDLGNANLSGLLINML 85

The following BLAST results are available for this feature:

BLAST of Carg03815 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515128.1	2.1e-52	99.12	leucine-rich repeat protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022960104.1	3.6e-52	98.67	leucine-rich repeat protein 1-like isoform X1 [Cucurbita moschata] >XP_022960105...	[more]
XP_023004379.1	6.2e-52	98.23	leucine-rich repeat protein 1-like isoform X1 [Cucurbita maxima]	[more]
XP_023515129.1	1.5e-50	98.67	leucine-rich repeat protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022960106.1	2.6e-50	98.23	leucine-rich repeat protein 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg03815 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34210.1	7.5e-28	65.91	somatic embryogenesis receptor-like kinase 2	[more]
AT1G71830.1	9.2e-26	72.22	somatic embryogenesis receptor-like kinase 1	[more]
AT4G33430.2	2.7e-25	62.07	BRI1-associated receptor kinase	[more]
AT5G21090.1	1.3e-24	57.45	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.2	1.7e-24	66.67	Leucine-rich repeat (LRR) family protein	[more]

BLAST of Carg03815 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H6W9\|LRR1_CAPAN	9.4e-28	67.82	Leucine-rich repeat protein 1 OS=Capsicum annuum OX=4072 GN=LRR1 PE=1 SV=2	[more]
sp\|B8BB68\|BAK1_ORYSI	2.7e-27	67.82	LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=...	[more]
sp\|Q6Z4U4\|BAK1_ORYSJ	2.7e-27	67.82	LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica OX=39947 GN=BAK1 PE=1 S...	[more]
sp\|Q9XIC7\|SERK2_ARATH	1.4e-26	65.91	Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2...	[more]
sp\|Q7XV05\|SERK2_ORYSJ	1.3e-24	62.79	LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1...	[more]

BLAST of Carg03815 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5BT04\|A0A2P5BT04_PARAD	5.2e-31	75.58	LRR domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_213...	[more]
tr\|A0A2P4KHP7\|A0A2P4KHP7_QUESU	3.4e-30	70.65	Lrr receptor kinase bak1 OS=Quercus suber OX=58331 GN=CFP56_51030 PE=4 SV=1	[more]
tr\|A0A2R6QQ96\|A0A2R6QQ96_ACTCH	1.3e-29	73.56	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase OS=Actinidia chinensis ...	[more]
tr\|A0A2P5F238\|A0A2P5F238_9ROSA	1.7e-29	74.12	Somatic embryogenesis receptor-like kinase OS=Trema orientalis OX=63057 GN=TorRG...	[more]
tr\|A0A0A0KAC4\|A0A0A0KAC4_CUCSA	4.1e-28	74.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091960 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013210	LRR_N_plant-typ
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03815-RA	Carg03815-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 21..220 e-value: 1.6E-52 score: 179.8
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 23..62 e-value: 8.5E-11 score: 41.9
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 19..178 coord: 132..212
None	No IPR available	PANTHER	PTHR27001:SF70	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	coord: 19..178 coord: 132..212
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 23..203

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03815	Cla001490	Watermelon (97103) v1	carwmB0986
Carg03815	Csa6G091960	Cucumber (Chinese Long) v2	carcuB0995
Carg03815	MELO3C022345	Melon (DHL92) v3.5.1	carmeB0951
Carg03815	ClCG06G001830	Watermelon (Charleston Gray)	carwcgB0956
Carg03815	CSPI06G07470	Wild cucumber (PI 183967)	carcpiB1018
Carg03815	Cucsa.349310	Cucumber (Gy14) v1	carcgyB1099
Carg03815	CmaCh08G000160	Cucurbita maxima (Rimu)	carcmaB1361
Carg03815	CmaCh17G014130	Cucurbita maxima (Rimu)	carcmaB1351
Carg03815	CmoCh08G000170	Cucurbita moschata (Rifu)	carcmoB1322
Carg03815	CmoCh17G013600	Cucurbita moschata (Rifu)	carcmoB1312
Carg03815	Lsi09G017580	Bottle gourd (USVL1VR-Ls)	carlsiB890
Carg03815	Cp4.1LG12g09970	Cucurbita pepo (Zucchini)	carcpeB1355
Carg03815	Cp4.1LG17g09350	Cucurbita pepo (Zucchini)	carcpeB1359
Carg03815	CsGy6G007500	Cucumber (Gy14) v2	carcgybB0968
Carg03815	MELO3C022345.2	Melon (DHL92) v3.6.1	carmedB0957
Carg03815	CsaV3_6G007870	Cucumber (Chinese Long) v3	carcucB1024
Carg03815	Cla97C06G111130	Watermelon (97103) v2	carwmbB1032
Carg03815	Bhi12G002138	Wax gourd	carwgoB1141

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03815	Carg11572	Silver-seed gourd	carcarB014

The following block(s) are covering this gene:

None