Cp4.1LG17g09160 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG17g09160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaC03g05770D protein
Location	Cp4.1LG17 : 7137724 .. 7138470 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAAAGAACAAGGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCCTCTTCTTACGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCGTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTTCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTGATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGGGAAAAATCCAGCAAGAACGTCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTGCTCCTCTGTCGCCGCCGCCGTTGCCTGAAGTTCTTCCGTTGGCGATGGATGACGGTTCTGTGGCTCCAGCGACGTCTGTGAGTGGCGGTGTTGAAGCGACAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

mRNA sequence

ATGAAAATAAAGAACAAGGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCCTCTTCTTACGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCGTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTTCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTGATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGGGAAAAATCCAGCAAGAACGTCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTGCTCCTCTGTCGCCGCCGCCGTTGCCTGAAGTTCTTCCGTTGGCGATGGATGACGGTTCTGTGGCTCCAGCGACGTCTGTGAGTGGCGGTGTTGAAGCGACAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

Coding sequence (CDS)

ATGAAAATAAAGAACAAGGGTAAAGTCCATCCATCTCCATCTTCTTCTTCTTCTTCCTCTTCTTACGATGGGGACTTCTTTGATGTCTTCAACTATCTTCCGGCGGCGATTTTGGCTCTGCTCACGGTTCTGACCATCGACGATCGAGAGGTTTTGGCTTTCATGATGAGAAGATCCATGGAGACGTCAACGCCGTCGTCTTCCCTATCGGAAAATAAATTTTCCAAGAGAGGTTCGAAGAAATCCGGTTCTCCACGAGCCAATTCGGGTAGCGTGTGTGTTCACGCGCCGCCGTCTCTTAGTTGCTTTGACTGTTATATGAGTTACTGGAACCGATGGAACTCGTCGCCGAACGGCGAGCTGATTCATCAGGCCATTGAGGCTTTCGAAGAGCAATTGGCCAACGGGGAAAAATCCAGCAAGAACGTCAAAGGCAAGAGGAAGGACAAAATCGGCCGCCGATCATCGGAGAAGCCTGTCGATGTTGCTCCTCTGTCGCCGCCGCCGTTGCCTGAAGTTCTTCCGTTGGCGATGGATGACGGTTCTGTGGCTCCAGCGACGTCTGTGAGTGGCGGTGTTGAAGCGACAGAGGGAAGCGGAGAACTGCCACGGACTGAGGCGCGGGCTGCGATGGTGGTTGTCCCTTCGTCGCCGCCGAGCAACCACAAGGGTTTGGCCCGGAAGGTATGGCCGGACGTGTTAGGGTTATTTAATTCTCGTCTATGGAGTCTTTGGGGTCCAAATTAG

Protein sequence

MKIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPPPLPEVLPLAMDDGSVAPATSVSGGVEATEGSGELPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN

Homology

[Close]

BLAST of Cp4.1LG17g09160 vs. TrEMBL
Match: A0A0A0KC94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094670 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 146/206 (70.87%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 55  MMRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWN 114
           MMRRSMETS+PSSS+S  KFSKR SKKS +PRA S S CVHAPPSL+CFDCYMSYW+RWN
Sbjct: 1   MMRRSMETSSPSSSVSGKKFSKRVSKKSDAPRAGSHSACVHAPPSLTCFDCYMSYWDRWN 60

Query: 115 SSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPP--PLPE 174
           SSPNGELIHQAIEAFEEQLA GEKSSKNVKGKRKDKI RRS +K +++  +SPP  P+PE
Sbjct: 61  SSPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKISRRSLDKSLNI--VSPPLLPVPE 120

Query: 175 VLPLAMDDG-SVAPATSVSGGVEATE----GSGELPRT-----EARAAMVVVPSSPPSNH 234
             PL +D+G S A ATS S  VE  E    GS + PRT     E+R A+VV+PS PP++H
Sbjct: 121 THPLQIDEGSSTAQATSGSIDVEVEEKTADGSLDPPRTEEDSVESRGALVVIPSPPPNSH 180

Query: 235 KGLARKVWPDVLGLFNSRLWSLWGPN 249
           KG ARKVWPDVLGLFNSRLWSLW PN
Sbjct: 181 KGFARKVWPDVLGLFNSRLWSLWSPN 204

[Close]

BLAST of Cp4.1LG17g09160 vs. TrEMBL
Match: V4TD81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032426mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-51
Identity = 140/276 (50.72%), Postives = 173/276 (62.68%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSM 60
           MKIKNKGKV+PSPSSSSSSS  +GD+  V   LPA ILAL +VL+++DREVLA+++ RS+
Sbjct: 1   MKIKNKGKVYPSPSSSSSSS--NGDYLSVLKLLPAGILALASVLSLEDREVLAYLITRSI 60

Query: 61  ETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPP--SLSCFDCYMSYWNRWNSSPN 120
           +T+T ++S S N   ++ SKK+ +  +NS S   H PP     CFDCY SYW RW+SSPN
Sbjct: 61  KTTTATASSSSN-IQRKASKKAATGGSNSNSNNNHRPPVFDCDCFDCYTSYWFRWDSSPN 120

Query: 121 GELIHQAIEAFEEQLANGEKS-----SKNVKGKRKDKIGRRSSEKPVDV----------A 180
            ELIHQAIEAFE+ LANGE S      KN K KR+DK  RRSS+    +           
Sbjct: 121 RELIHQAIEAFEDHLANGEASDKLSNKKNGKAKRRDKTARRSSDNNKQLLVEETNEWSSG 180

Query: 181 PLSPPPL---PE-VLPLAMDDGSVAPATSVSGGVEATEGSGELPRTEARAAMVV----VP 240
           P +P P+   PE V+P        AP TS     +  E +  +    A ++ VV      
Sbjct: 181 PAAPSPVESSPENVVP-------PAPLTSPENEAQRLEENEVVVEVSAESSAVVEEGQTA 240

Query: 241 SSPP---SNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
           SSPP   S HKGLARKV PDVLGLFNSRLWSLW PN
Sbjct: 241 SSPPATSSPHKGLARKVLPDVLGLFNSRLWSLWSPN 266

[Close]

BLAST of Cp4.1LG17g09160 vs. TrEMBL
Match: F6HGD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03980 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-50
Identity = 130/268 (48.51%), Postives = 171/268 (63.81%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSSSSSSY----DGDFFDVFNYLPAAILALLTVLTIDDREVLAFMM 60
           MKIK+KGKV+PSPSSSSSS+        D   V   LPAAIL L +VL+ +DREVLA+M+
Sbjct: 1   MKIKHKGKVYPSPSSSSSSTPQTFISSPDALSVLKLLPAAILVLASVLSAEDREVLAYMI 60

Query: 61  RRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSV----CVHAPP--SLSCFDCYMSYW 120
            RS++T+T ++  S ++ SK+ SKK     A  G        H PP     CF+CY  YW
Sbjct: 61  TRSIKTTTTTNPCSFSQDSKKKSKKQPPAAAGGGGGGGGGSAHKPPVFDCGCFECYTCYW 120

Query: 121 NRWNSSPNGELIHQAIEAFEEQLANGEKSSK-NVKGKRKDKIGRRSSEKPVDVA-----P 180
            RW+SSPN ELIHQAIEAFE+ L++GEK  +   +GK+K+++GRR ++KP D++     P
Sbjct: 121 FRWDSSPNRELIHQAIEAFEDHLSSGEKPKRIGGRGKKKERVGRRIADKPDDISCQLEMP 180

Query: 181 LSPPPLPEVLPLAMDDGSVAPATSVSGGVE---ATEGSGELPRTEARA-AMVVVPSSPPS 240
           ++    PEV     DD SVAPA +   G E   A + +G++P  E+ A    +V  +  S
Sbjct: 181 VAEEEAPEV--PNTDDASVAPAPTARDGCEEAKAEDNNGDVPGEESAAETSEIVRDTAAS 240

Query: 241 NHKGLARKVWPDVLGLFNSRLWSLWGPN 249
           NHKGLARKV PDVLGL NSRLW LW PN
Sbjct: 241 NHKGLARKVLPDVLGLLNSRLWGLWSPN 266

[Close]

BLAST of Cp4.1LG17g09160 vs. TrEMBL
Match: A0A068UXV3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038281001 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.5e-49
Identity = 133/274 (48.54%), Postives = 164/274 (59.85%), Query Frame = 1


Query: 3   IKNKGKVHPSPSSSSSSSSYDG-----DFFDVFNYLPAAILALLTVLTIDDREVLAFMMR 62
           ++NKGKVHPSPSSSSSSSS+       D   V   LPAAILA+  VL+++DREVLA+M+ 
Sbjct: 1   MRNKGKVHPSPSSSSSSSSHSSHHNNKDALSVLKLLPAAILAIAAVLSLEDREVLAYMIT 60

Query: 63  RSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPP--SLSCFDCYMSYWNRWNS 122
           RS++T+ P + + E   SK+ SKKS    AN+G+      P     CFDCY SYW RW+S
Sbjct: 61  RSIKTTNPPALVDEK--SKKNSKKS----ANTGAHLHKTTPLFDCECFDCYTSYWFRWDS 120

Query: 123 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPL---------- 182
           SPN ELIHQAIEAFEE L NGE+S K  K KR+DK+GRR ++K VD  PL          
Sbjct: 121 SPNRELIHQAIEAFEEHLNNGEQSKKG-KNKRRDKMGRRGTQKLVDF-PLPEAGNGSPEI 180

Query: 183 ----SPPPLPEVLPLAMDDGSVAPATSVSGGVEAT-------EGSGELPRTEARAAMVVV 242
               S  P  E        G + P +  +G   A        E    +  T    A++V 
Sbjct: 181 QESSSSVPQDEAFSAESSAGVLVPESGDTGEAAAAALIVVKEEEEDVVTETAPETAIIVR 240

Query: 243 PSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
            ++P SNHKGLARKV PDVLGL NSRLWSLW PN
Sbjct: 241 GAAPASNHKGLARKVLPDVLGLLNSRLWSLWSPN 266

[Close]

BLAST of Cp4.1LG17g09160 vs. TrEMBL
Match: B9RMB4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079250 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.2e-48
Identity = 140/275 (50.91%), Postives = 164/275 (59.64%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSS------SSSSYD----GDFFDVFNYLPAAILALLTVLTIDDRE 60
           MKIKNKGKV+PSPSSSS      SSSS D     DF  V   LPA IL L +VL++ DRE
Sbjct: 1   MKIKNKGKVYPSPSSSSFLGSASSSSSRDYRDGDDFLSVLKLLPATILTLASVLSLQDRE 60

Query: 61  VLAFMMRRSMETST--PSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSL--SCFDCY 120
           VLA+M+ RS++T+T       S  + SK+ S K+ SP         H  PS    CFDCY
Sbjct: 61  VLAYMITRSLKTTTNPTPKQASLLQGSKKKSTKNKSPN-------THKSPSFDCDCFDCY 120

Query: 121 MSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPV-DV--A 180
            SYW RW+SSPN ELIHQ IEAFEE L+NGE   K  +GKR+DK GRR  +K V DV   
Sbjct: 121 TSYWFRWDSSPNRELIHQVIEAFEEHLSNGELFKKTSRGKRRDKTGRRVGDKSVIDVLGR 180

Query: 181 PLSPPPLPEVLPLAMDDGS-VAPATSVSGGV--------EATEGSGELP-RTEARAAMVV 240
           P    P   V   ++  G+ V+P   VS  V        E  +GS E P   E     VV
Sbjct: 181 PEMQEPEATVNESSLVGGAVVSPNDDVSPVVMLERAADGEEVKGSEESPAEAETEEMAVV 240

Query: 241 VPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
             S PP+NHKGLARKV PDVLGLFNSRLW+LW PN
Sbjct: 241 ARSPPPNNHKGLARKVLPDVLGLFNSRLWNLWNPN 268

[Close]

BLAST of Cp4.1LG17g09160 vs. TAIR10
Match: AT5G13090.1 (AT5G13090.1 unknown protein)

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-38
Identity = 118/282 (41.84%), Postives = 154/282 (54.61%), Query Frame = 1


Query: 1   MKIKNKGKVHPSP------SSSSSSSSY----DGDFFDVFNYLPAAILALLTVLTIDDRE 60
           MK+K KGKV+PSP      SSSSSSS++    D D   V   LPA IL L++VL+ ++RE
Sbjct: 1   MKMKKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEERE 60

Query: 61  VLAFMMRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPP--SLSCFDCYMS 120
           VLA+++ R    S   +S S+NK  K+ +K S +          H PP     CFDCY +
Sbjct: 61  VLAYLITRGTTISDRGNSSSKNKTKKKSNKSSKN----------HKPPVFDCECFDCYTN 120

Query: 121 YWNRWNSSPNGELIHQAIEAFEEQLA--NGEKSSKNVKGKRKDKIGRR---SSEKP---- 180
           YW RW+SSPN ELIH+ IEAFE      N    SK+ +GK+K+K GRR   S  KP    
Sbjct: 121 YWFRWDSSPNRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRV 180

Query: 181 VDVAPLSPPPLPEVLPLAMDDGSVAPATSVSGGV-----EATEGSG------ELPRTEAR 240
            D       P+ E     M++ +V+ ++ VS  V     E  EG        E    E  
Sbjct: 181 TDNGDKDSKPVVE----PMNETTVSESSHVSSPVRLSEAEVAEGEPEDEIVVEEDGQEEE 240

Query: 241 AAMVVVP--SSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
           + +VV P  +S  + HKGLARKV PDVLGLF+S  W LW PN
Sbjct: 241 STVVVFPAAASNVTGHKGLARKVLPDVLGLFHSNFWRLWNPN 268

[Close]

BLAST of Cp4.1LG17g09160 vs. TAIR10
Match: AT1G24270.1 (AT1G24270.1 unknown protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 70/163 (42.94%), Postives = 91/163 (55.83%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSM 60
           MK+  KGKVHPSP   SSSSS   D   VF  L +AIL L++VL+ +D EVLA+++ RS+
Sbjct: 55  MKVMKKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSL 114

Query: 61  ETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSL--SCFDCYMSYWNRWNSSPN 120
            T+   S            KK  S          H  P L   CFDCY SYW++W+SS N
Sbjct: 115 NTTNVVS-----------CKKKRS----------HKAPLLDCQCFDCYTSYWSKWDSSSN 174

Query: 121 GELIHQAIEAFEEQLANGEKSSKNV--KGKRKDKIGRRSSEKP 160
            ELI+Q IEAFE+ L   E S+ +   K K++ K    S E+P
Sbjct: 175 RELINQIIEAFEDHLTRDEISASHTSKKNKKRAKKIEISEEQP 196

[Close]

BLAST of Cp4.1LG17g09160 vs. TAIR10
Match: AT1G12020.1 (AT1G12020.1 unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 1


Query: 2   KIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSME 61
           K+  KG VHPSP    S+         +   LP AI +L  VL+ +DREVLA+++  +  
Sbjct: 3   KLYRKGTVHPSPPQIKSNDH-------LLTLLPVAIFSLAAVLSPEDREVLAYLISTASY 62

Query: 62  TS--TPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNG 121
           +    P+S L++ K  K+    + SP  +             CF CY SYW RW+SSP+ 
Sbjct: 63  SGERNPTSRLNKTKAHKKALFDNHSPLFHC-----------DCFSCYTSYWVRWDSSPSR 122

Query: 122 ELIHQAIEAFEEQLANGEKSSKNVKGK--RKDKIGRRSS 157
           +LIH+ I+AFE+ L   +   KNV GK  R+ + G+ SS
Sbjct: 123 QLIHEIIDAFEDSLEKNKNKKKNVTGKKDRRKRSGKSSS 143

[Close]

BLAST of Cp4.1LG17g09160 vs. TAIR10
Match: AT1G62422.1 (AT1G62422.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 56/154 (36.36%), Postives = 79/154 (51.30%), Query Frame = 1


Query: 2   KIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSME 61
           K+  KG VHPSP  +  +   D  F  +   LP AIL+L+  L+++DREVLA+++  S +
Sbjct: 3   KLCRKGTVHPSPPPAIKT---DEQFLSL---LPVAILSLVAALSVEDREVLAYLISNSGD 62

Query: 62  TSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSL-SCFDCYMSYWNRWNSSPNGE 121
            S   S L +NK                     H+P  L  CF CY SYW RW++SP  +
Sbjct: 63  -SNRISRLKKNKEDNH-----------------HSPLFLCDCFSCYTSYWVRWDTSPRRQ 122

Query: 122 LIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRR 155
           LIH+ I+A+E+ L    K  K  + KR  K   R
Sbjct: 123 LIHEIIDAYEDSLE--MKKKKKDRRKRSGKASGR 130

[Close]

BLAST of Cp4.1LG17g09160 vs. NCBI nr
Match: gi|659120428|ref|XP_008460189.1| (PREDICTED: uncharacterized protein LOC103499074 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 9.3e-98
Identity = 195/256 (76.17%), Postives = 217/256 (84.77%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRSM 60
           MKIKNKGKVHPSPSSSSSSSS DG+FFDV NYLP AI AL++VLT+DDREVLAFMMRRSM
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSSDGNFFDVLNYLPVAIFALVSVLTVDDREVLAFMMRRSM 60

Query: 61  ETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWNSSPNGE 120
           ETS+PSSS+S  KFSKR SKKS +PRA S S CVHAPPSL+CFDCYMSYW+RWNSSPNGE
Sbjct: 61  ETSSPSSSVSGKKFSKRVSKKSDTPRAGSRSACVHAPPSLTCFDCYMSYWDRWNSSPNGE 120

Query: 121 LIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPP--PLPEVLPLAM 180
           LIHQAIEAFEEQLA GEKSSKNVKGKRKDKIGRRS +K +++  +SPP  P+PE  PL +
Sbjct: 121 LIHQAIEAFEEQLAKGEKSSKNVKGKRKDKIGRRSLDKSLNI--VSPPLLPVPETHPLQI 180

Query: 181 DDG-SVAPATSVSGGVEATEGSGELPRT-----EARAAMVVVPSSPPSNHKGLARKVWPD 240
           D+G S APATS S  VE  E SGE PR+     E+R A+VV+PS PP+ HKGLARKVWPD
Sbjct: 181 DEGSSAAPATSGSAAVEVEEKSGEAPRSEEEAVESRGALVVIPSPPPNIHKGLARKVWPD 240

Query: 241 VLGLFNSRLWSLWGPN 249
           VLGLFNSRLWSLW PN
Sbjct: 241 VLGLFNSRLWSLWSPN 254

[Close]

BLAST of Cp4.1LG17g09160 vs. NCBI nr
Match: gi|700191245|gb|KGN46449.1| (hypothetical protein Csa_6G094670 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 1.7e-67
Identity = 146/206 (70.87%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 55  MMRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWN 114
           MMRRSMETS+PSSS+S  KFSKR SKKS +PRA S S CVHAPPSL+CFDCYMSYW+RWN
Sbjct: 1   MMRRSMETSSPSSSVSGKKFSKRVSKKSDAPRAGSHSACVHAPPSLTCFDCYMSYWDRWN 60

Query: 115 SSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPP--PLPE 174
           SSPNGELIHQAIEAFEEQLA GEKSSKNVKGKRKDKI RRS +K +++  +SPP  P+PE
Sbjct: 61  SSPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKISRRSLDKSLNI--VSPPLLPVPE 120

Query: 175 VLPLAMDDG-SVAPATSVSGGVEATE----GSGELPRT-----EARAAMVVVPSSPPSNH 234
             PL +D+G S A ATS S  VE  E    GS + PRT     E+R A+VV+PS PP++H
Sbjct: 121 THPLQIDEGSSTAQATSGSIDVEVEEKTADGSLDPPRTEEDSVESRGALVVIPSPPPNSH 180

Query: 235 KGLARKVWPDVLGLFNSRLWSLWGPN 249
           KG ARKVWPDVLGLFNSRLWSLW PN
Sbjct: 181 KGFARKVWPDVLGLFNSRLWSLWSPN 204

[Close]

BLAST of Cp4.1LG17g09160 vs. NCBI nr
Match: gi|778722061|ref|XP_011658397.1| (PREDICTED: uncharacterized protein LOC105435986 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 6.5e-67
Identity = 145/205 (70.73%), Postives = 164/205 (80.00%), Query Frame = 1


Query: 56  MRRSMETSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSCFDCYMSYWNRWNS 115
           MRRSMETS+PSSS+S  KFSKR SKKS +PRA S S CVHAPPSL+CFDCYMSYW+RWNS
Sbjct: 1   MRRSMETSSPSSSVSGKKFSKRVSKKSDAPRAGSHSACVHAPPSLTCFDCYMSYWDRWNS 60

Query: 116 SPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVDVAPLSPP--PLPEV 175
           SPNGELIHQAIEAFEEQLA GEKSSKNVKGKRKDKI RRS +K +++  +SPP  P+PE 
Sbjct: 61  SPNGELIHQAIEAFEEQLAKGEKSSKNVKGKRKDKISRRSLDKSLNI--VSPPLLPVPET 120

Query: 176 LPLAMDDG-SVAPATSVSGGVEATE----GSGELPRT-----EARAAMVVVPSSPPSNHK 235
            PL +D+G S A ATS S  VE  E    GS + PRT     E+R A+VV+PS PP++HK
Sbjct: 121 HPLQIDEGSSTAQATSGSIDVEVEEKTADGSLDPPRTEEDSVESRGALVVIPSPPPNSHK 180

Query: 236 GLARKVWPDVLGLFNSRLWSLWGPN 249
           G ARKVWPDVLGLFNSRLWSLW PN
Sbjct: 181 GFARKVWPDVLGLFNSRLWSLWSPN 203

[Close]

BLAST of Cp4.1LG17g09160 vs. NCBI nr
Match: gi|694393638|ref|XP_009372250.1| (PREDICTED: uncharacterized protein LOC103961433 [Pyrus x bretschneideri])

HSP 1 Score: 215.7 bits (548), Expect = 9.1e-53
Identity = 141/287 (49.13%), Postives = 174/287 (60.63%), Query Frame = 1


Query: 1   MKIKNKGKVHPSP-----SSSSSSSSYDGDFFDVFNYLPAAILALLTVLTIDDREVLAFM 60
           MKIKNKGKVHPSP     SSS+SSSS DG    V   LPAAILAL +VL+++DREVLA++
Sbjct: 1   MKIKNKGKVHPSPFSSSASSSASSSSSDGYVLSVLQLLPAAILALASVLSLEDREVLAYL 60

Query: 61  MRRSMET--------STPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSC--FDC 120
           + RSM+T        S P++   + K SK+GS KS    A++ +   H PP   C  FDC
Sbjct: 61  ITRSMKTTPNTSSSTSIPAAQDPKKKTSKKGSNKS----ASNPAAAAHQPPMFDCDCFDC 120

Query: 121 YMSYWNRWNSSPNGELIHQAIEAFEEQLANGEKSSKNVKGKRKDKIGRRSSEKPVD---- 180
           Y SYW +W+SSPN ELIHQAIEAFE+ LANGE+  +N +GKR+DK+G R S K  D    
Sbjct: 121 YRSYWFKWDSSPNRELIHQAIEAFEDHLANGERPKRNARGKRRDKMGHRDSSKTPDVSAQ 180

Query: 181 --------VAPLSP--------PPLPEVLPLAMDDGSVAPATSVSGGVEATEGSG----E 240
                   VAP SP        P LPE+  + +  GS   A +V G     E  G     
Sbjct: 181 NDIFLEENVAPASPEFVQSSTTPVLPEIDVVVV--GSPEKADAVEGNEGKVEDLGVDVAV 240

Query: 241 LPRTEARAAMVVVPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
            P   A    VV+ ++  SNH+GLARKV PDVLGLFNSRLW+LW PN
Sbjct: 241 APPDTADDMAVVLRAAAASNHRGLARKVLPDVLGLFNSRLWNLWSPN 281

[Close]

BLAST of Cp4.1LG17g09160 vs. NCBI nr
Match: gi|645231029|ref|XP_008222203.1| (PREDICTED: uncharacterized protein LOC103322100 [Prunus mume])

HSP 1 Score: 213.4 bits (542), Expect = 4.5e-52
Identity = 141/275 (51.27%), Postives = 172/275 (62.55%), Query Frame = 1


Query: 1   MKIKNKGKVHPSPSSSSSSSSY-DGDFFDVFNYLPAAILALLTVLTIDDREVLAFMMRRS 60
           MKIKNKGKVHPSPSSSSSSSS  DG    V   LPAAILAL +VL+++DREVLA+++ RS
Sbjct: 1   MKIKNKGKVHPSPSSSSSSSSNSDGFVLSVLQLLPAAILALASVLSLEDREVLAYLITRS 60

Query: 61  METSTPSSSLSENKFSKRGSKKSGSPRANSGSVCVHAPPSLSC--FDCYMSYWNRWNSSP 120
           M+T+   SS+      K+ SKK   P++ S S   H PP   C  FDCY SYW +W+SSP
Sbjct: 61  MKTTPNISSIPAQDPKKKSSKKG--PKSTSAST--HQPPMFDCDCFDCYRSYWFKWDSSP 120

Query: 121 NGELIHQAIEAFEEQLANGEKSSKNV-KGKRKDKIGRRSSEKPVDVAPLSPPPLPE---- 180
           N ELIHQAIEAFE+ LANGEK+ KN  +GKR+DK+ RR + KPVDVA      L E    
Sbjct: 121 NRELIHQAIEAFEDHLANGEKTKKNSGRGKRRDKLSRREAPKPVDVAAQDSIFLEENAQV 180

Query: 181 --VLPLAMDDGSVAPATSV--------SGGVEATEG---------SGELPRTEARAAMVV 240
              L +     ++ P   V        + GVE  +G         + E P T    AM+ 
Sbjct: 181 SHELAVESSASALLPENDVVLVGSNEKADGVEENDGKVEDLGAEVNLEPPETADDVAMIA 240

Query: 241 VPSSPPSNHKGLARKVWPDVLGLFNSRLWSLWGPN 249
             +S  SNH+GLARKV PDVLGLFNSRLW+LW PN
Sbjct: 241 RTAS-ASNHRGLARKVLPDVLGLFNSRLWNLWSPN 270

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09160 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g09160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC94_CUCSA	1.2e-67	70.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094670 PE=4 SV=1	[more]
V4TD81_9ROSI	3.5e-51	50.72	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032426mg PE=4 SV=1	[more]
F6HGD1_VITVI	6.6e-50	48.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03980 PE=4 SV=...	[more]
A0A068UXV3_COFCA	9.5e-49	48.54	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038281001 PE=4 SV=1	[more]
B9RMB4_RICCO	6.2e-48	50.91	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079250 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g09160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13090.1	4.0e-38	41.84	unknown protein	[more]
AT1G24270.1	1.5e-21	42.94	unknown protein	[more]
AT1G12020.1	1.1e-16	36.48	unknown protein	[more]
AT1G62422.1	1.5e-13	36.36	unknown protein	[more]

BLAST of Cp4.1LG17g09160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120428\|ref\|XP_008460189.1\|	9.3e-98	76.17	PREDICTED: uncharacterized protein LOC103499074 [Cucumis melo]	[more]
gi\|700191245\|gb\|KGN46449.1\|	1.7e-67	70.87	hypothetical protein Csa_6G094670 [Cucumis sativus]	[more]
gi\|778722061\|ref\|XP_011658397.1\|	6.5e-67	70.73	PREDICTED: uncharacterized protein LOC105435986 [Cucumis sativus]	[more]
gi\|694393638\|ref\|XP_009372250.1\|	9.1e-53	49.13	PREDICTED: uncharacterized protein LOC103961433 [Pyrus x bretschneideri]	[more]
gi\|645231029\|ref\|XP_008222203.1\|	4.5e-52	51.27	PREDICTED: uncharacterized protein LOC103322100 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09160.1	Cp4.1LG17g09160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..247 score: 1.3
None	No IPR available	PANTHER	PTHR31903:SF4	SUBFAMILY NOT NAMED	coord: 1..247 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG17g09160	Cucsa.349530	Cucumber (Gy14) v1	cgycpeB0911
Cp4.1LG17g09160	CmaCh08G000040	Cucurbita maxima (Rimu)	cmacpeB914
Cp4.1LG17g09160	Cla001511	Watermelon (97103) v1	cpewmB341
Cp4.1LG17g09160	Csa6G094670	Cucumber (Chinese Long) v2	cpecuB322
Cp4.1LG17g09160	MELO3C022326	Melon (DHL92) v3.5.1	cpemeB284
Cp4.1LG17g09160	ClCG06G002040	Watermelon (Charleston Gray)	cpewcgB298
Cp4.1LG17g09160	CSPI06G07710	Wild cucumber (PI 183967)	cpecpiB323
Cp4.1LG17g09160	Lsi09G017380	Bottle gourd (USVL1VR-Ls)	cpelsiB249
Cp4.1LG17g09160	MELO3C022326.2	Melon (DHL92) v3.6.1	cpemedB332
Cp4.1LG17g09160	CsaV3_6G008090	Cucumber (Chinese Long) v3	cpecucB0403
Cp4.1LG17g09160	Bhi12G002162	Wax gourd	cpewgoB0389
Cp4.1LG17g09160	CsGy6G007760	Cucumber (Gy14) v2	cgybcpeB783
Cp4.1LG17g09160	Carg03827	Silver-seed gourd	carcpeB1359
Cp4.1LG17g09160	Carg11588	Silver-seed gourd	carcpeB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG17g09160	Cp4.1LG01g11840	Cucurbita pepo (Zucchini)	cpecpeB330

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG17g09160	Cucurbita maxima (Rimu)	cmacpeB389
Cp4.1LG17g09160	Cucurbita moschata (Rifu)	cmocpeB352
Cp4.1LG17g09160	Cucurbita moschata (Rifu)	cmocpeB851